BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780764|ref|YP_003065177.1| hypothetical protein
CLIBASIA_03275 [Candidatus Liberibacter asiaticus str. psy62]
(194 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780764|ref|YP_003065177.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040441|gb|ACT57237.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 194
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI
Sbjct: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS
Sbjct: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK
Sbjct: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
Query: 181 KQKIWGIYPGEVFK 194
KQKIWGIYPGEVFK
Sbjct: 181 KQKIWGIYPGEVFK 194
>gi|315121981|ref|YP_004062470.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495383|gb|ADR51982.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 177
Score = 266 bits (681), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/177 (71%), Positives = 147/177 (83%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M +I I TLAIYFY+ S E EI +K+ +PRFVTIK++RAN+RIGPG +YTV
Sbjct: 1 MSRISHIFFISTLAIYFYVVQAPIFSQEVEISKKQLIPRFVTIKSNRANARIGPGTIYTV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
VCTYL +GLPVE+++EYENWRQIRD DGT GWINK LLS KRSAIVSPWNRK N YI+
Sbjct: 61 VCTYLIRGLPVEIIQEYENWRQIRDVDGTTGWINKILLSNKRSAIVSPWNRKEKNRPYID 120
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L++KP+ QSI+VAKVEPGVLLTIRECSGEWCFGYN D EGWIK++KIWGIYPGEVFK
Sbjct: 121 LHQKPETQSIVVAKVEPGVLLTIRECSGEWCFGYNSDVEGWIKQKKIWGIYPGEVFK 177
>gi|327192784|gb|EGE59713.1| hypothetical protein RHECNPAF_1930010 [Rhizobium etli CNPAF512]
Length = 179
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Query: 20 KILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y V
Sbjct: 4 KVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDYAVS 63
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + +++NL
Sbjct: 64 WMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVFVNL 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 124 RREAQPSASIIAKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 179
>gi|190889806|ref|YP_001976348.1| hypothetical protein RHECIAT_CH0000174 [Rhizobium etli CIAT 652]
gi|190695085|gb|ACE89170.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 179
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Query: 20 KILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y V
Sbjct: 4 KVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDYAVS 63
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + +++NL
Sbjct: 64 WMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVFVNL 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 124 RREAQPSASIIAKLEPGVMLTIGECNGDWCRAEADGATGWVAQSEIWGAYPGEAFK 179
>gi|241207089|ref|YP_002978185.1| hypothetical protein Rleg_4408 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860979|gb|ACS58646.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 20 KILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L + L + + + + A + + PLPRFVT+K+ R N RIGPG Y V
Sbjct: 4 KVLTSCLALAIVLAASMGSVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDYAVS 63
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + IY+NL
Sbjct: 64 WMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIYVNL 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ + IVAK+EPGV+LTI EC+G+WC + GW+ + +IWG YPGE FK
Sbjct: 124 RREAQPSASIVAKLEPGVMLTIGECNGDWCRAESDGASGWVAQSEIWGAYPGEAFK 179
>gi|116249911|ref|YP_765749.1| hypothetical protein RL0144 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254559|emb|CAK05633.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 179
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 104/142 (73%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N RIGPG Y V YL GLPVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVTLKSKRVNLRIGPGTDYAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI +PW + IY+NL ++ + IVAK+EPGV+LTI EC+G+WC +
Sbjct: 98 SLLSGQRAAIAAPWMKTKGKGIYVNLRREAQPSASIVAKLEPGVMLTIGECNGDWCRAES 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 158 DGASGWVAQSEIWGAYPGEAFK 179
>gi|86355796|ref|YP_467688.1| hypothetical protein RHE_CH00136 [Rhizobium etli CFN 42]
gi|86279898|gb|ABC88961.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 179
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 103/142 (72%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N RIGPG + V YL GLPVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVTLKSKRVNLRIGPGTDFAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI +PW + +Y+NL ++ + IVAK+EPGV+LTI EC+G+WC
Sbjct: 98 SLLSGQRAAIAAPWMKTKGKGVYVNLRREAQPSASIVAKLEPGVMLTIGECNGDWCHAET 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 158 DGAAGWVAQSEIWGAYPGEAFK 179
>gi|218662759|ref|ZP_03518689.1| hypothetical protein RetlI_26864 [Rhizobium etli IE4771]
Length = 194
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 103/142 (72%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N RIGPG Y V YL GLPVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 53 PLPRFVTLKSKRVNLRIGPGTDYAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQ 112
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI +PW + I++NL ++ + I+AK+EPGV+LTI EC+G+WC
Sbjct: 113 SLLSGQRAAIAAPWMKTKGKGIFVNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAET 172
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 173 DGATGWVAQSEIWGAYPGEAFK 194
>gi|150398568|ref|YP_001329035.1| hypothetical protein Smed_3379 [Sinorhizobium medicae WSM419]
gi|150030083|gb|ABR62200.1| protein of unknown function DUF1058 [Sinorhizobium medicae WSM419]
Length = 183
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKP----LPRFVTIKASRANSRIGPGIMYTVVCT 80
S I L + L +L S K P LPRFV++KA N RIGP + Y V
Sbjct: 10 SRISALTMAALLGAVLTASTAHAQAAKGPSGLPLPRFVSLKAKSVNLRIGPSVDYAVAFR 69
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R +++N+ +
Sbjct: 70 YLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAMAAPWMRSKGEGVFVNMRR 129
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
P + IVA++EPGV+L I EC+G+WC EGWI + +IWG YPGE FK
Sbjct: 130 DPQGTAPIVARIEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPGEAFK 183
>gi|222084348|ref|YP_002542877.1| hypothetical protein Arad_0203 [Agrobacterium radiobacter K84]
gi|221721796|gb|ACM24952.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 179
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 103/142 (72%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N R+GP Y V YL +GLPVE+++EY+NWR++RD DGT GW+N+
Sbjct: 38 PLPRFVTLKSKRVNLRVGPSADYAVSWLYLKQGLPVEIIQEYDNWRRVRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+RSA+ +PW + +++N+ + ++AK++PGV++ +REC+G+WC
Sbjct: 98 SLLSGQRSALAAPWMKGKGKAVFVNMRRDAQPSGTVIAKLQPGVMMNVRECTGDWCLATA 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
TEGW+ + +IWG YPGE FK
Sbjct: 158 DGTEGWVAQSEIWGAYPGEAFK 179
>gi|227824000|ref|YP_002827973.1| hypothetical protein NGR_c34960 [Sinorhizobium fredii NGR234]
gi|227343002|gb|ACP27220.1| conserved hypothetical protein contains bacterial SH3-like region
[Sinorhizobium fredii NGR234]
Length = 215
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 117/183 (63%), Gaps = 6/183 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPI--LALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+R ++ K Q LA++ A + AL+ + PLPRFV++K+ N RIGP
Sbjct: 37 MRHFISKASQ----LLLAVFLATAIMNSAALAQAAKGPSGLPLPRFVSLKSRSVNLRIGP 92
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 93 SLDYAVAFRYLKTGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAVAAPWMRGKG 152
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I++NL + P + IVA+++PGVLL I EC+G+WC EGWI + +IWG YPGE
Sbjct: 153 EGIFVNLRRDPQGTAPIVARMQPGVLLHIGECNGDWCHAETQGVEGWIAQGEIWGAYPGE 212
Query: 192 VFK 194
FK
Sbjct: 213 AFK 215
>gi|307306338|ref|ZP_07586082.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
gi|307319225|ref|ZP_07598654.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306895061|gb|EFN25818.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306902180|gb|EFN32777.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
Length = 179
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 101/142 (71%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA N RIGP + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVSLKAKSVNLRIGPSVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+A+ +PW R +++N+ + P + IVA+VEPGV+L I EC+G+WC
Sbjct: 98 ALLSGDRTALAAPWMRSKGEGVFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAET 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
EGWI + +IWG YPGE FK
Sbjct: 158 QGVEGWIAQSEIWGAYPGEAFK 179
>gi|209551659|ref|YP_002283576.1| hypothetical protein Rleg2_4088 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537415|gb|ACI57350.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 103/142 (72%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N RIGPG Y V YL GLPVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVTLKSKRVNLRIGPGTDYAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI +PW + +++NL ++ + IVAK+EPGV+LTI EC+G+WC
Sbjct: 98 SLLSGQRAAIAAPWMKTKAKGVFVNLRREALPSASIVAKLEPGVMLTIGECNGDWCRAET 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 158 DGASGWVAQSEIWGAYPGEAFK 179
>gi|195970216|ref|NP_384279.2| hypothetical protein SMc02848 [Sinorhizobium meliloti 1021]
gi|187904126|emb|CAC41560.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 223
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 101/142 (71%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA N RIGP + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 82 PLPRFVSLKAKSVNLRIGPSVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQ 141
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+A+ +PW R +++N+ + P + IVA+VEPGV+L I EC+G+WC
Sbjct: 142 ALLSGDRTALAAPWMRSKGEGVFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAET 201
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
EGWI + +IWG YPGE FK
Sbjct: 202 QGVEGWIAQSEIWGAYPGEAFK 223
>gi|159184151|ref|NP_353113.2| hypothetical protein Atu0078 [Agrobacterium tumefaciens str. C58]
gi|159139486|gb|AAK85898.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 179
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 99/142 (69%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R N RIGP Y V YL G+PVE+++EYENWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVSLKSKRVNMRIGPSTDYAVSWMYLKSGMPVEIIQEYENWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG+R+A+ +PW R +Y+N+ ++ + + A++EPGV+ I EC+G+WC
Sbjct: 98 ALLSGERTAVAAPWMRGKGKEVYVNMRREAQSGAAVTARLEPGVVFRIGECNGDWCRAEA 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 158 GQASGWVSQGEIWGAYPGEAFK 179
>gi|325291523|ref|YP_004277387.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
gi|325059376|gb|ADY63067.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
Length = 179
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 99/142 (69%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R N RIGP Y V Y+ G+PVE+++EYENWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVSLKSKRVNMRIGPSTDYAVSWMYMKSGMPVEIIQEYENWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG+R+A+ +PW R +Y+N+ + + ++A++EPGV+ I EC+G+WC
Sbjct: 98 ALLSGERTAVAAPWMRGKGKDVYVNMRRDAQSGASVIARLEPGVVFRIGECNGDWCRAEA 157
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +IWG YPGE FK
Sbjct: 158 GQASGWVSQGEIWGAYPGEAFK 179
>gi|222147254|ref|YP_002548211.1| hypothetical protein Avi_0315 [Agrobacterium vitis S4]
gi|221734244|gb|ACM35207.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 179
Score = 167 bits (422), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 18 MPKILQNSLI--FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
MP + S + F A+ A + PLPRFVT+K++R N RIGP Y
Sbjct: 1 MPNGFKRSCLIPFIAALCVIWAGAAVAQGPTKGMSGLPLPRFVTLKSARVNLRIGPSTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
Y GLPVE+++EY+NWR+IRD DGT GW+N++LLSG+RSA+ +PW + + IY
Sbjct: 61 ATSWMYTRAGLPVEIIQEYDNWRRIRDADGTEGWVNQTLLSGERSALAAPWMKGKGDNIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+N+ ++ + +VAK++PGVL+ + EC+G WC T+GW+ + +IWG YPGE FK
Sbjct: 121 VNMRREGQAGAGVVAKLQPGVLIKLLECNGNWCRAEVDGTKGWVAQGEIWGAYPGEAFK 179
>gi|13474642|ref|NP_106211.1| hypothetical protein mll5573 [Mesorhizobium loti MAFF303099]
gi|14025396|dbj|BAB51997.1| mll5573 [Mesorhizobium loti MAFF303099]
Length = 186
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R NSR+GPG Y+V YL GLP+EVV+E++ WR++RD DG+ GWIN+
Sbjct: 46 PLPRFVSLKSGRVNSRVGPGANYSVDWMYLKAGLPMEVVQEFDTWRRVRDADGSEGWINQ 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI++PW R INL K PD + +VA VEPGV+ TI+ C G+WC
Sbjct: 106 SLLSGRRTAIIAPWQRGKG--AQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEMTL 163
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +WG YPGE K
Sbjct: 164 EGHTGWLAQAAVWGAYPGERVK 185
>gi|306843593|ref|ZP_07476194.1| Bacterial SH3-like region [Brucella sp. BO1]
gi|306276284|gb|EFM57984.1| Bacterial SH3-like region [Brucella sp. BO1]
Length = 190
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + ++H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW K + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPW-LKNDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|148558959|ref|YP_001259969.1| hypothetical protein BOV_2088 [Brucella ovis ATCC 25840]
gi|148370216|gb|ABQ60195.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPR 56
T + LY + +++M I SL F L + AP + +H +P+PR
Sbjct: 50 TARGRSLYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPR 108
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLS
Sbjct: 109 FASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLS 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
GKR+AI +PW K + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 169 GKRTAITAPW-LKNDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVR 227
Query: 177 GWIKKQKIWGIYPGEVF 193
GWIK+ ++WG+YPGEVF
Sbjct: 228 GWIKQSELWGVYPGEVF 244
>gi|239833225|ref|ZP_04681554.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825492|gb|EEQ97060.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 225
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K +R N R+GPG Y V ++ GLPVE+++EY+NWR+IRD DGT GW+ +
Sbjct: 85 PVPRFVSLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIIQEYDNWRRIRDADGTEGWVYQ 144
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSGKR+AI +PW K N IN+ + S +VA++EPGV+ T+REC+G+WC
Sbjct: 145 SLLSGKRTAITAPW-LKNNQGSMINMRRDASETSGLVAEIEPGVVGTVRECTGQWCRLDM 203
Query: 173 LDTEGWIKKQKIWGIYPGEVF 193
GWIK+ +WG+YPGEVF
Sbjct: 204 GGVRGWIKQSDLWGVYPGEVF 224
>gi|110636266|ref|YP_676474.1| hypothetical protein Meso_3942 [Mesorhizobium sp. BNC1]
gi|110287250|gb|ABG65309.1| protein of unknown function DUF1058 [Chelativorans sp. BNC1]
Length = 185
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKK--------PLPRFVTIKASRANSRI 69
M K+L+ + + +L + L A+S ++ PLPRFV++K+ R N R+
Sbjct: 1 MFKVLKKTRLLSLVLATALTAFPAISQDQAQVGAALKRGPSGLPLPRFVSLKSGRVNMRV 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
GPG Y V+ YL GLPVE+++EY+NWR++RD DGT GWIN++LLSG+R+A+V+PW +
Sbjct: 61 GPGTQYAVMWLYLKPGLPVEIIQEYDNWRRVRDADGTEGWINQALLSGQRTAVVAPWFKG 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
N + L KP+ + VAKVEPG++ + C+G WC EGW+ + IWG+YP
Sbjct: 121 KEN-AAVPLVAKPEEGAREVAKVEPGLVGEVAMCNGSWCRINFAGHEGWMDQGAIWGVYP 179
Query: 190 GEVFK 194
GE K
Sbjct: 180 GEAIK 184
>gi|260567357|ref|ZP_05837827.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306839954|ref|ZP_07472748.1| Bacterial SH3-like region [Brucella sp. NF 2653]
gi|260156875|gb|EEW91955.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306404918|gb|EFM61203.1| Bacterial SH3-like region [Brucella sp. NF 2653]
Length = 190
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW K + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPW-LKNDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|153008071|ref|YP_001369286.1| hypothetical protein Oant_0735 [Ochrobactrum anthropi ATCC 49188]
gi|151559959|gb|ABS13457.1| protein of unknown function DUF1058 [Ochrobactrum anthropi ATCC
49188]
Length = 190
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 110/175 (62%), Gaps = 11/175 (6%)
Query: 30 LAIYFYLAPILALSHEKEIFEKK----------PLPRFVTIKASRANSRIGPGIMYTVVC 79
LA +F LAP+ A + P+PRFV++K +R N RIGPG Y V
Sbjct: 17 LAFFFILAPLGASHRHAARAAEPAGTTVGASGLPVPRFVSLKPARVNLRIGPGRDYAVSW 76
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
++ GLPVE+++EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW K N IN+
Sbjct: 77 LFMKAGLPVEIIQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPW-LKNNQGSMINMR 135
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ S + A++EPGV+ T+REC+G+WC GWIK+ +WG+YPGEVF
Sbjct: 136 RDAADTSGLAAEIEPGVVGTVRECTGQWCRVDMGGVRGWIKQSDLWGVYPGEVFD 190
>gi|260563075|ref|ZP_05833561.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265999711|ref|ZP_05467487.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260153091|gb|EEW88183.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263095439|gb|EEZ19040.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 190
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW K + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPW-LKNDKGTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|297247399|ref|ZP_06931117.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
gi|297174568|gb|EFH33915.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
Length = 190
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGTI-IAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|256060135|ref|ZP_05450317.1| hypothetical protein Bneo5_07231 [Brucella neotomae 5K33]
gi|261324113|ref|ZP_05963310.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306842714|ref|ZP_07475357.1| Bacterial SH3-like region [Brucella sp. BO2]
gi|261300093|gb|EEY03590.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306287160|gb|EFM58662.1| Bacterial SH3-like region [Brucella sp. BO2]
Length = 181
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 112/176 (63%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + ++H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW K + I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPW-LKNDKGTMIT 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|319779756|ref|YP_004139232.1| hypothetical protein Mesci_0007 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165644|gb|ADV09182.1| protein of unknown function DUF1058 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 186
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 98/142 (69%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R NSR+GPG Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+
Sbjct: 46 PLPRFVSLKSGRVNSRVGPGANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQ 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AIV+PW R INL PD + +VA +EPGV+ TI+ C G+WC
Sbjct: 106 SLLSGRRTAIVAPWQRGKGT--RINLLNSPDKDARVVAMIEPGVMGTIKSCDGQWCEMTF 163
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +WG YPGE K
Sbjct: 164 EGHTGWLAQSVVWGAYPGERVK 185
>gi|225626541|ref|ZP_03784580.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261759107|ref|ZP_06002816.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|225618198|gb|EEH15241.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261739091|gb|EEY27087.1| conserved hypothetical protein [Brucella sp. F5/99]
Length = 190
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW K + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPW-LKNDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|237816515|ref|ZP_04595508.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788582|gb|EEP62797.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 245
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 8/197 (4%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPR 56
T + LY + +++M I SL F L + P + +H +P+PR
Sbjct: 50 TARGRSLYRVLSQRFMIAIF-GSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPR 108
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLS
Sbjct: 109 FASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLS 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
GKR+AI +PW + I I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 169 GKRTAITAPWLKNDKGTI-IAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVR 227
Query: 177 GWIKKQKIWGIYPGEVF 193
GWIK+ ++WG+YPGEVF
Sbjct: 228 GWIKQSELWGVYPGEVF 244
>gi|23503023|ref|NP_699150.1| hypothetical protein BR2176 [Brucella suis 1330]
gi|161620084|ref|YP_001593971.1| hypothetical protein BCAN_A2218 [Brucella canis ATCC 23365]
gi|163844188|ref|YP_001628593.1| hypothetical protein BSUIS_A2013 [Brucella suis ATCC 23445]
gi|254700807|ref|ZP_05162635.1| hypothetical protein Bsuib55_08102 [Brucella suis bv. 5 str. 513]
gi|254705175|ref|ZP_05167003.1| hypothetical protein Bsuib36_14886 [Brucella suis bv. 3 str. 686]
gi|254707308|ref|ZP_05169136.1| hypothetical protein BpinM_10125 [Brucella pinnipedialis
M163/99/10]
gi|254709151|ref|ZP_05170962.1| hypothetical protein BpinB_02557 [Brucella pinnipedialis B2/94]
gi|254713424|ref|ZP_05175235.1| hypothetical protein BcetM6_08732 [Brucella ceti M644/93/1]
gi|254716219|ref|ZP_05178030.1| hypothetical protein BcetM_07256 [Brucella ceti M13/05/1]
gi|254718214|ref|ZP_05180025.1| hypothetical protein Bru83_01471 [Brucella sp. 83/13]
gi|256030676|ref|ZP_05444290.1| hypothetical protein BpinM2_08482 [Brucella pinnipedialis
M292/94/1]
gi|256158677|ref|ZP_05456560.1| hypothetical protein BcetM4_07391 [Brucella ceti M490/95/1]
gi|256254081|ref|ZP_05459617.1| hypothetical protein BcetB_07233 [Brucella ceti B1/94]
gi|256370571|ref|YP_003108082.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|261217993|ref|ZP_05932274.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221222|ref|ZP_05935503.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314790|ref|ZP_05953987.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316650|ref|ZP_05955847.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321157|ref|ZP_05960354.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751315|ref|ZP_05995024.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755880|ref|ZP_05999589.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265983171|ref|ZP_06095906.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265987722|ref|ZP_06100279.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997183|ref|ZP_06109740.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851401|ref|ZP_06792074.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
gi|23349065|gb|AAN31065.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336895|gb|ABX63200.1| protein of unknown function DUF1058 [Brucella canis ATCC 23365]
gi|163674911|gb|ABY39022.1| protein of unknown function DUF1058 [Brucella suis ATCC 23445]
gi|256000734|gb|ACU49133.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|260919806|gb|EEX86459.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923082|gb|EEX89650.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293847|gb|EEX97343.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295873|gb|EEX99369.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303816|gb|EEY07313.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741068|gb|EEY28994.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745633|gb|EEY33559.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551651|gb|EEZ07641.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659919|gb|EEZ30180.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264661763|gb|EEZ32024.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294819990|gb|EFG36989.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
Length = 181
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW K + I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPW-LKNDKGTMIT 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|225853600|ref|YP_002733833.1| hypothetical protein BMEA_A2236 [Brucella melitensis ATCC 23457]
gi|256045780|ref|ZP_05448658.1| hypothetical protein Bmelb1R_14840 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992196|ref|ZP_06104753.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|225641965|gb|ACO01879.1| protein of unknown function DUF1058 [Brucella melitensis ATCC
23457]
gi|263003262|gb|EEZ15555.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|326410175|gb|ADZ67240.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539893|gb|ADZ88108.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 181
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW K + I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPW-LKNDKGTMIA 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|256258561|ref|ZP_05464097.1| hypothetical protein Babob9C_14672 [Brucella abortus bv. 9 str.
C68]
gi|260884872|ref|ZP_05896486.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260874400|gb|EEX81469.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 181
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + I I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKNDKGTI-IA 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|254690308|ref|ZP_05153562.1| hypothetical protein Babob68_09067 [Brucella abortus bv. 6 str.
870]
gi|254694796|ref|ZP_05156624.1| hypothetical protein Babob3T_09063 [Brucella abortus bv. 3 str.
Tulya]
gi|260755847|ref|ZP_05868195.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|261215122|ref|ZP_05929403.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260675955|gb|EEX62776.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260916729|gb|EEX83590.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 181
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + I I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKNDKGTI-IA 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|256112500|ref|ZP_05453421.1| hypothetical protein Bmelb3E_07438 [Brucella melitensis bv. 3 str.
Ether]
gi|265993936|ref|ZP_06106493.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262764917|gb|EEZ10838.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 181
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPDRVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW K + I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPW-LKNDKGTMIA 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|189025226|ref|YP_001935994.1| SH3 domain protein [Brucella abortus S19]
gi|260546276|ref|ZP_05822016.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|189020798|gb|ACD73520.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260096383|gb|EEW80259.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
Length = 190
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + P + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGTI-IAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|254696425|ref|ZP_05158253.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
gi|260760796|ref|ZP_05873139.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260671228|gb|EEX58049.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 181
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P+PRF ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+
Sbjct: 40 RPVPRFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVY 99
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+SLLSGKR+AI +PW + I I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 100 QSLLSGKRTAITAPWLKNDKGTI-IAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLD 158
Query: 172 NLDTEGWIKKQKIWGIYPGEVF 193
GWIKK ++WG+YPGEVF
Sbjct: 159 MSGVRGWIKKSELWGVYPGEVF 180
>gi|260169580|ref|ZP_05756391.1| hypothetical protein BruF5_14716 [Brucella sp. F5/99]
Length = 181
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTV 77
SL F L + AP + +H +P+PRF ++K +R N R+GPG Y V
Sbjct: 6 GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAV 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI +PW K + I
Sbjct: 66 SWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAITAPW-LKNDKGTMIT 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 125 MRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 180
>gi|62291012|ref|YP_222805.1| hypothetical protein BruAb1_2149 [Brucella abortus bv. 1 str.
9-941]
gi|82700923|ref|YP_415497.1| hypothetical protein BAB1_2177 [Brucella melitensis biovar Abortus
2308]
gi|254731337|ref|ZP_05189915.1| SH3-like region [Brucella abortus bv. 4 str. 292]
gi|260759070|ref|ZP_05871418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|62197144|gb|AAX75444.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82617024|emb|CAJ12133.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|260669388|gb|EEX56328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
Length = 181
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P+PRF ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+
Sbjct: 40 RPVPRFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVY 99
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+SLLSGKR+AI +PW + I I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 100 QSLLSGKRTAITAPWLKNDKGTI-IAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLD 158
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
GWIK+ ++WG+YPGEVF
Sbjct: 159 MSGVRGWIKQSELWGVYPGEVFD 181
>gi|17988236|ref|NP_540870.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|17984002|gb|AAL53134.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
Length = 167
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P+PRF ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+
Sbjct: 26 RPVPRFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVY 85
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+SLLSGKR+AI +PW K + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 86 QSLLSGKRTAITAPW-LKNDKGTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLD 144
Query: 172 NLDTEGWIKKQKIWGIYPGEVF 193
GWIK+ ++WG+YPGEVF
Sbjct: 145 MSGVRGWIKQSELWGVYPGEVF 166
>gi|260461967|ref|ZP_05810212.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
gi|259032214|gb|EEW33480.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
Length = 186
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R NSR+GPG Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+
Sbjct: 46 PLPRFVSLKSGRVNSRVGPGANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQ 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+AI++PW R INL PD + ++A VEPGV+ I+ C G+WC
Sbjct: 106 SLLSGRRTAIIAPWQRGKG--AQINLLNSPDKDARVIAIVEPGVMGMIKSCDGQWCEMTL 163
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +WG YPGE K
Sbjct: 164 GGHTGWLAQSTVWGAYPGERVK 185
>gi|163757762|ref|ZP_02164851.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
gi|162285264|gb|EDQ35546.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 100/142 (70%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA+R N RIGPG Y V Y G+P+EV++EY+NWR++RD +GT GW+ +
Sbjct: 46 PLPRFVSLKATRVNLRIGPGRDYAVAWLYTRPGVPMEVIQEYDNWRRVRDAEGTEGWVYQ 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A V+PW + + +++++ + +VA++EPGV++ ++ C GEWC
Sbjct: 106 SLLSGERTATVAPWKAASGKDEFTSMHREARANARVVARLEPGVVVKVKACDGEWCEASA 165
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+G++ + +IWG YPGE F+
Sbjct: 166 EGMDGYVAQSQIWGAYPGEAFR 187
>gi|90420509|ref|ZP_01228416.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335237|gb|EAS48990.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 107/163 (65%), Gaps = 4/163 (2%)
Query: 34 FYLAPILALSHEKEI--FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
F A L +H E+ K PLPR+V++KASR N RIGPG Y V YL +GLPVEV+
Sbjct: 21 FTGAAPLPAAHAVEVGPVSKLPLPRYVSLKASRVNLRIGPGRDYPVTWLYLKEGLPVEVI 80
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+EYE WR+IRD +GT GW+ SLLSG R++I +PW R I+++ P + +VA+
Sbjct: 81 QEYELWRRIRDSEGTEGWVYHSLLSGDRTSIAAPWLR--GKATMIDIHNSPATDAPLVAR 138
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+EPGV+ ++ C+ WC D +G++++Q+IWG+YP E F+
Sbjct: 139 IEPGVVAGVKTCTAGWCELKVADRDGYVRQQEIWGVYPDERFE 181
>gi|319405040|emb|CBI78650.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 185
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 40 LALSHEKEIFEKK-----PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
LA SH + + + PLPRF +IK++R N RIGPG Y+++ TY +GLP+E+++EY
Sbjct: 27 LAFSHPQTLNQNLGTSGLPLPRFASIKSARVNMRIGPGNNYSIIFTYQKQGLPIEIIQEY 86
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ WR++RD +G GWI +SLLSGKR+AI PW + + + L K P IVA++EP
Sbjct: 87 DQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKVHRLM--LRKNPGDNEKIVAEIEP 144
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ IR+C+G WC +T GW+ + ++WGIYP E K
Sbjct: 145 NIIGNIRQCNGIWCELDIRNTRGWLHQNQLWGIYPDEKIK 184
>gi|121602573|ref|YP_989515.1| hypothetical protein BARBAKC583_1266 [Bartonella bacilliformis
KC583]
gi|120614750|gb|ABM45351.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 185
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV+IK +R N R+GPG Y +V TY KGLP+E+++EY+ WR+IRD +G GW+ +
Sbjct: 45 PLPRFVSIKPARVNVRVGPGSNYAIVFTYQKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQ 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSGKR+AI PW + + L K P + +VA+VEP ++ IR+C G WC
Sbjct: 105 SLLSGKRTAITIPWQKDKTKRLM--LRKTPTDNAPLVAEVEPNIIGNIRQCDGYWCELSI 162
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + ++WGIYPGE K
Sbjct: 163 GKVRGWLHQTQLWGIYPGEKIK 184
>gi|319898321|ref|YP_004158414.1| hypothetical protein BARCL_0143 [Bartonella clarridgeiae 73]
gi|319402285|emb|CBI75824.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 185
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF +IK++R N R+GPG Y+++ TY +GLP+E+++EY+ WR++RD +G GWI +
Sbjct: 45 PLPRFASIKSARVNMRVGPGNNYSIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQ 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSGKR+AI PW + + + L K P + IVA+VEP ++ IR+C+G WC
Sbjct: 105 SLLSGKRTAITIPWQKDKKHRLM--LRKNPRDNAKIVAEVEPNIIGNIRQCNGSWCELDI 162
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+ GW+ + ++WGIYP E K
Sbjct: 163 HNIRGWLNQTQLWGIYPDEKIK 184
>gi|319403613|emb|CBI77198.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 185
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 40 LALSHEKEIFEKK-----PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L+ SH + + + PLPRF +IK++R N R+GPG Y+++ TY +GLP+E+++EY
Sbjct: 27 LSFSHSQTLNQDLGPSGLPLPRFASIKSARVNMRVGPGNNYSIIFTYQKQGLPIEIIQEY 86
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ WR++RD +G GWI +SLLSGKR+AI PW + + + L K P IVA++EP
Sbjct: 87 DQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKTHRLM--LRKNPGDNEKIVAEIEP 144
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ TIR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 145 NIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIYPDEKIK 184
>gi|163867430|ref|YP_001608627.1| hypothetical protein Btr_0145 [Bartonella tribocorum CIP 105476]
gi|161017074|emb|CAK00632.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 186
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 15/186 (8%)
Query: 22 LQNSLIF---TLAIYFYLAPILALSHEKEIFEKK----------PLPRFVTIKASRANSR 68
+QNS ++ LA +A ++ L + + + PLPRF +IK +R N R
Sbjct: 1 MQNSRLYHVLMLASCILIAKVIVLGSPRLLHAQTLNQNLGPSGLPLPRFASIKPTRVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSNYSIIFTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L KKP + ++A+VEP V+ I +C G+WC + GW+ + ++WGIY
Sbjct: 121 DKTKRLM--LRKKPTDNAELLAEVEPNVIGNIHQCDGQWCEITLNNVHGWLHQSQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|319406530|emb|CBI80172.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 185
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 40 LALSHEKEIFEKK-----PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L+ SH + + + PLPRF +IK++R N R+GPG Y+++ TY +GLP+E+++EY
Sbjct: 27 LSFSHPQTLNQDLGPSGLPLPRFASIKSARVNMRVGPGNNYSIIFTYQKQGLPIEIIQEY 86
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ WR++RD +G GWI +SLLSGKR+AI PW + + + L K P IVA++EP
Sbjct: 87 DQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKTHRLM--LRKNPGDNEKIVAEIEP 144
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ TIR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 145 NIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIYPDEKIK 184
>gi|240849802|ref|YP_002971190.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
gi|240266925|gb|ACS50513.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
Length = 186
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF +IK + N R+GPG Y+++ TY KGLP+E+++EY+ WR+IRD +G GW+ +
Sbjct: 45 PLPRFASIKPTSVNVRVGPGSNYSIIFTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQ 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSGKR+AI PW + + L K P + +VA+VEP V+ IR+C G+WC
Sbjct: 105 SLLSGKRTAITIPWQKDKTKRLM--LRKNPTDNAELVAEVEPNVIGNIRQCDGQWCELNI 162
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+T GW+++ ++WGIYP E K
Sbjct: 163 NNTRGWLQQPQLWGIYPDEKVK 184
>gi|319407998|emb|CBI81652.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 185
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 15/186 (8%)
Query: 22 LQNSLIFTLAIYF--------YLAPILALSHEKEIFEKK-----PLPRFVTIKASRANSR 68
++NS+ F + + +L L LSH + + PLPRF +IK +R N R
Sbjct: 1 MKNSIWFRFSTFLSCVLITGEFLFSSLVLSHAQASNQNLGPSGLPLPRFASIKPARVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y ++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSNYPIIYTYQKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + + P + ++A+VEP ++ IR+C G WC + GW+ + ++WGIY
Sbjct: 121 DKTKRLMVR--QTPTDNAKLLAEVEPNIIGNIRQCDGHWCELDIRNIRGWLHQTQLWGIY 178
Query: 189 PGEVFK 194
PGE K
Sbjct: 179 PGEKIK 184
>gi|307943429|ref|ZP_07658773.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307773059|gb|EFO32276.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 169
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ R N R+GP + + T++ GLPVE+++E++NWR+IRD++G GW+
Sbjct: 32 PLPRFVSLKSDRVNVRLGPSREHDIAWTFVKSGLPVEIIQEFDNWRRIRDWEGKEGWVFH 91
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+PW + P L ++ +IIVA+++P VL T+ ECSG WC
Sbjct: 92 SLLSGRRTALVTPWEKSNRTP----LRQRSKSDAIIVAELDPFVLATVTECSGGWCKVQG 147
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
EGW+ + +++G+YP E+F+
Sbjct: 148 EGFEGWLDQTRLFGVYPDELFE 169
>gi|158421861|ref|YP_001523153.1| hypothetical protein AZC_0237 [Azorhizobium caulinodans ORS 571]
gi|158328750|dbj|BAF86235.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 199
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 99/169 (58%), Gaps = 4/169 (2%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +L+ L + LA +K P+PRFV++KA R N R GP V +
Sbjct: 32 RRALMALLMVTMLPGMALAADDDKGAGTGLPVPRFVSLKADRVNVRNGPNRDQDVAWIFT 91
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
GLPVE+ E+E WR+IRD DG GW+ S+LSG+R+A+V+PW++ T I L KP
Sbjct: 92 RAGLPVEITAEFETWRRIRDADGAEGWVYHSMLSGRRTALVAPWSKDTT----ITLRDKP 147
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
D + VA++E VL TI+ C G+WC +G++++ K+WG+YP E
Sbjct: 148 DANARAVARLEANVLGTIKSCDGKWCRILGDGFDGYVEQNKLWGVYPNE 196
>gi|298290257|ref|YP_003692196.1| hypothetical protein Snov_0242 [Starkeya novella DSM 506]
gi|296926768|gb|ADH87577.1| protein of unknown function DUF1058 [Starkeya novella DSM 506]
Length = 211
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 90/139 (64%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++KA + N R GP + V + GLPVE+ E+E WR+IRD DG GW+
Sbjct: 74 PVPRFVSLKADKVNVRSGPTRDHAVAWVFTRAGLPVEITAEFETWRRIRDSDGAEGWVYH 133
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S+LSG+R+A+VSPW P+Y + PD S + AK+EPGVL + C G+WC +
Sbjct: 134 SMLSGRRTALVSPWKAGEPTPLYAD----PDKSSAVKAKLEPGVLGKVEHCDGKWCRFFE 189
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+G++ ++++WG+YPGE
Sbjct: 190 NGFDGFVAQERLWGVYPGE 208
>gi|49473801|ref|YP_031843.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
gi|49239304|emb|CAF25630.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
Length = 185
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 12/177 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKK----------PLPRFVTIKASRANSRIGPGIMYTV 77
LA + ++A + S + + PLPRF +IK +R N RIGPG Y++
Sbjct: 10 LVLAPFIFMAGVFTFSSSDFLHAQTLNQNLGPSGLPLPRFASIKPTRVNVRIGPGSNYSI 69
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 70 IFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKRLM-- 127
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K P + +VA+VEP V+ I +C G WC + GW+ + ++WGIYP E K
Sbjct: 128 LRKTPTDNAKVVAEVEPNVIGNIHQCDGYWCELDINNIRGWLHQPQLWGIYPDEKIK 184
>gi|49474949|ref|YP_032990.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
gi|49237754|emb|CAF26946.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
Length = 186
Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF +IK +R N R+GPG Y ++ TY +GLP+E+++EY+ WR+IRD +G GW+ +
Sbjct: 45 PLPRFASIKPTRVNVRVGPGSDYAIIFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQ 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSGKR+AI PW + + L K P + +VA+VEP V+ IR C+G WC
Sbjct: 105 SLLSGKRTAITIPWQKDKTKRLI--LRKSPADNAEVVAEVEPNVIGNIRHCNGYWCELNI 162
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+ GW+ + ++WGIYP E
Sbjct: 163 NNIRGWVYQSQLWGIYPDE 181
>gi|254504542|ref|ZP_05116693.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440613|gb|EEE47292.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 156
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 94/142 (66%), Gaps = 4/142 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K+ R N R+GP + + T++ GLPVE+++E+ENWR+IRD++G GW+
Sbjct: 18 PVPRFVSLKSDRVNVRLGPSREHDISWTFVQSGLPVEIIQEFENWRRIRDWEGKQGWVFH 77
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+PW R P+ D IVA++EP VL + EC+G WC
Sbjct: 78 SLLSGRRTALVTPWERDNRTPLRARSQSDAD----IVAELEPFVLTAVGECAGGWCRVSG 133
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+ GW+ + +++G+YP E+ +
Sbjct: 134 EEFNGWLDQTRLFGVYPDELIE 155
>gi|118591454|ref|ZP_01548852.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
gi|118436126|gb|EAV42769.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
Length = 165
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K+ R N RIGP + + T++ GLPVE+V E+ENWR+IRD++G GW+ +
Sbjct: 27 PVPRFVSLKSDRVNVRIGPSREHDIAWTFVQSGLPVEIVGEFENWRRIRDWEGKQGWVFR 86
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLS +R+A+V+PW + P+ D IVA+++P VL TI EC+G WC
Sbjct: 87 SLLSSRRTALVTPWEKSDRTPLRARSRSDAD----IVAELDPFVLTTISECAGGWCRVNG 142
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
+ +GW+ + +++G+YP E+
Sbjct: 143 ENYDGWLDQTRLFGVYPDEL 162
>gi|114706968|ref|ZP_01439867.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
gi|114537518|gb|EAU40643.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++L +F +++ P A+ E + K PLPR+V++K+SR N R GPG + V
Sbjct: 28 RLLLAGSVFVVSLTTMPLPSAAV--EVGRYSKLPLPRYVSLKSSRVNLRNGPGREHKVNW 85
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
YL GLPVE+++E+++WR+IRD DGT GW+ SLLSG+R+AI +PW R + ++++
Sbjct: 86 LYLKSGLPVEIIQEFDHWRKIRDADGTEGWVYHSLLSGERTAIAAPWLRGKD--ALVDVH 143
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
P + ++ ++EPGV+ + +C+ WC + G++++ +IWG+YP E
Sbjct: 144 MSPAKDAPLIVRMEPGVVSKVEKCNAGWCEIAVSERVGFVEQNEIWGVYPDE 195
>gi|304392313|ref|ZP_07374254.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303295417|gb|EFL89776.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 190
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 107/187 (57%), Gaps = 17/187 (9%)
Query: 25 SLIFTLAIYFYLAPILALSH-EKEIFEKK------PLPRFVTIKASRANSRIGPGIMYTV 77
++I LA+ P A S ++E+ K PLPRFV++KA AN R+GPG Y++
Sbjct: 3 AIILGLALGHASDPANAASPVDREVSTKTGRETGLPLPRFVSLKARSANLRVGPGRKYSI 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN------ 131
+ G+P+E+++E++ WR++RD DGT GW+ SLLS +R+A+V+PW R+ +
Sbjct: 63 SWRFQRSGVPLEIIQEFDRWRRVRDADGTTGWVLHSLLSSRRTAVVAPWERRRSIADLAK 122
Query: 132 ----NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ + ++ S VA+++PG+ +T+REC WC W++++ +WG
Sbjct: 123 APVVKAAFFDAKREASSNSSTVARLQPGLQVTVRECEESWCRVKARTVSMWVRREMLWGT 182
Query: 188 YPGEVFK 194
Y EV +
Sbjct: 183 YKDEVIE 189
>gi|312114989|ref|YP_004012585.1| hypothetical protein Rvan_2262 [Rhodomicrobium vannielii ATCC
17100]
gi|311220118|gb|ADP71486.1| protein of unknown function DUF1058 [Rhodomicrobium vannielii ATCC
17100]
Length = 175
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KAS N+R+GPG Y + + GLPVEV+ E+ENWRQ+RD +G GW+N
Sbjct: 38 PLPRFVSLKASEVNARVGPGGEYQIAWVFRRAGLPVEVIAEFENWRQVRDSEGGTGWVNA 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+L S +R+A+V+PW + + L +VA++EPG ++ I +C GE C Y
Sbjct: 98 ALTSARRTAVVAPW---VKDRMLFRLTATRG-GGTLVAQIEPGAIVDIAQCDGEDCEVYA 153
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+G++ ++ +WG+YPGE K
Sbjct: 154 SKQKGYLPQKSLWGVYPGEKVK 175
>gi|154254073|ref|YP_001414897.1| hypothetical protein Plav_3642 [Parvibaculum lavamentivorans DS-1]
gi|154158023|gb|ABS65240.1| protein of unknown function DUF1058 [Parvibaculum lavamentivorans
DS-1]
Length = 199
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ RAN R GPG + + Y G+P+EV+ E NWR+IRD +G GWI
Sbjct: 61 PVPRYVSLKSGRANVRRGPGTDFPIDWVYRKSGMPLEVIAESNNWRRIRDHEGDGGWIWH 120
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++L+G+RSAIV + + + + LYK+PD QS ++A E G++ + C+G WC
Sbjct: 121 TMLAGERSAIV---DAQAADGGPVALYKEPDRQSAVMAYAERGLVARVTSCTGNWCHLEA 177
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
EGW+ + +WG+YPGE F+
Sbjct: 178 GGAEGWVAQSALWGVYPGERFE 199
>gi|328541689|ref|YP_004301798.1| Bacterial SH3-like region [polymorphum gilvum SL003B-26A1]
gi|326411441|gb|ADZ68504.1| Bacterial SH3-like region [Polymorphum gilvum SL003B-26A1]
Length = 171
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L L LA+ P LA + P+PRFV++K+ R N R+GP + V T
Sbjct: 1 MLLRFLTVALAVLTLAQPALAQATRTGTASGLPVPRFVSLKSDRVNVRMGPSRDHEVAWT 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-NRKTNNPIYINLY 139
Y+ GLPVE+V+E+ENWR++RD++G GW+ SLLSG+R+ +V+PW + T P+ +
Sbjct: 61 YVQAGLPVEIVQEFENWRRVRDWEGKEGWLFHSLLSGRRTGLVTPWESADTATPLRASAR 120
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ IVA ++ VL +R+C G WC GWI + +++G+YP E
Sbjct: 121 S----DAPIVAYLQSKVLAEVRQCRGGWCRVEGAGYRGWIDQTRLFGVYPDETID 171
>gi|222086965|ref|YP_002545499.1| hypothetical protein Arad_3671 [Agrobacterium radiobacter K84]
gi|221724413|gb|ACM27569.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 184
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 7/168 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA P+ A + K P+PR+V++KA +A R+GP +Y Y+ GLP+
Sbjct: 22 ALATPMPAQPVAATAWNKGRETGLPIPRYVSLKAHKARMRVGPSTIYATKWIYMKPGLPL 81
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ EY WRQ+RD GT GW++ +LLSG+R+A+V+PW KTN L P+ + +
Sbjct: 82 EIIDEYGRWRQVRDDTGTTGWMHGALLSGQRTAVVAPW-LKTN----AMLRGGPEKTANL 136
Query: 149 VAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKKQKIWGIYPGEVFK 194
+A+++P VLL++ C+G WC G+I++ +WG YPGE+F+
Sbjct: 137 IAELQPRVLLSLHSCTGAWCNVSVREHSARGYIRQDLLWGAYPGEMFQ 184
>gi|300025010|ref|YP_003757621.1| hypothetical protein Hden_3509 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526831|gb|ADJ25300.1| protein of unknown function DUF1058 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 185
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K+ R N R GPG Y Y GLP+E+V+E+E+WR++RD +G GW+ +
Sbjct: 43 PVPRFVSLKSDRVNLRNGPGTDYPTGWVYRRAGLPLEIVQEFESWRKVRDSEGATGWVLQ 102
Query: 113 SLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S LSG+R+A+V PW RK + P + ++ +S IV VE GV+ +R C G WC
Sbjct: 103 SFLSGRRTALVLPWERKASTKPPLVPIHASDSERSHIVVNVEAGVIADLRTCDGRWCRVT 162
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
G+I+++K+WG Y GE K
Sbjct: 163 VDAYTGYIEQKKLWGAYEGETIK 185
>gi|217978629|ref|YP_002362776.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
gi|217504005|gb|ACK51414.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
Length = 177
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 90/139 (64%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ R N R GP + +L GLPVE+ E+E WR++RD +G+ GW+
Sbjct: 40 PIPRYVSLKSDRVNLREGPSKDHRTTWVFLRAGLPVEITAEFEIWRRVRDSEGSEGWVLH 99
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+PW + ++P+ Y KPD ++ + A ++ V+ +R C G WC +
Sbjct: 100 SLLSGRRTALVTPWKKGADSPV----YDKPDAKAAVAANLQSNVIANVRSCDGSWCRVWG 155
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+G+I++ +WG+YP E
Sbjct: 156 DGFKGYIEQGDLWGVYPNE 174
>gi|149203170|ref|ZP_01880141.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
gi|149143716|gb|EDM31752.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
Length = 167
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ S + L I L P+ A+ E+ PLPRFV++KAS N R GP + + + +
Sbjct: 3 VMKSGLVALVIMMGLGPVAAMGQERGPVTNLPLPRFVSMKASEGNVRRGPSLTHRIDWIF 62
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ +LLSG R+A V ++L K
Sbjct: 63 KRRDMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVRTASV--------EVEMLDLLAK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
PD +S++VA++E GV+ + EC +WC +GW K +WG+ GE F+
Sbjct: 115 PDAKSMVVARLEQGVIARLEECQPDWCAVSAGGYDGWAPKSALWGVMDGETFE 167
>gi|323135706|ref|ZP_08070789.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
gi|322398797|gb|EFY01316.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
Length = 176
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 9/160 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
I+ LAP A +K P+PR+V++K+ R N R GP + + Y GLPVE+
Sbjct: 23 IFATLAP--AQEQQKGPVSNLPIPRYVSLKSDRVNVREGPSKEHPTLWIYTRAGLPVEIT 80
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
E+E WR+IRD +G+ GW+ SLLSG+R+A+++PW ++ L D + VAK
Sbjct: 81 AEFETWRKIRDSEGSEGWVLHSLLSGRRTALIAPWKKEP------QLLTASD-HTTPVAK 133
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ PGV+ T+R C G+WC + +G+I+++ +WG+YPGE
Sbjct: 134 LGPGVIGTLRGCDGKWCRLAGKEFDGYIQQENLWGVYPGE 173
>gi|222147834|ref|YP_002548791.1| hypothetical protein Avi_1100 [Agrobacterium vitis S4]
gi|221734822|gb|ACM35785.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 239
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF ++KA R R GP Y V Y +GLPVE+++EY+NWRQ+RD DGT GW++
Sbjct: 97 PLPRFASLKADRVRMRAGPSTDYPVRFIYEARGLPVEIIEEYDNWRQVRDSDGTSGWMSA 156
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LSG R+ +V+PW + + L +P + I A+++P V L I C G WC +
Sbjct: 157 VMLSGARTGLVAPWRGSKGD--LVMLRTRPLATAAITAQLQPRVRLKIGGCDGHWC---S 211
Query: 173 LDTE-----GWIKKQKIWGIYPGEV 192
+ E G++++ +WG+YPGE
Sbjct: 212 VSVERGGPSGFVRQGLVWGVYPGET 236
>gi|218674984|ref|ZP_03524653.1| hypothetical protein RetlG_27915 [Rhizobium etli GR56]
Length = 151
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFVT+K+ R N RIGPG Y V YL GLPVE+++EY+NWR+IRD DGT GW+N+
Sbjct: 38 PLPRFVTLKSKRVNLRIGPGTDYAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQ 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
SLLSG+R+AI +PW + I++NL ++ + I+AK+EP
Sbjct: 98 SLLSGQRAAIAAPWMKTRARGIFVNLRREAQPSASIIAKLEP 139
>gi|92115676|ref|YP_575405.1| hypothetical protein Nham_0044 [Nitrobacter hamburgensis X14]
gi|91798570|gb|ABE60945.1| protein of unknown function DUF1058 [Nitrobacter hamburgensis X14]
Length = 185
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKK---PLPRFVTIKASRANSRIGP 71
R M K L S++F A+ + I A ++ K+ P+PR+V++K+ N R GP
Sbjct: 8 RVMMVKRLFASMVFAAAMLNAVG-IEATANAKDSALSASGLPVPRYVSLKSDHVNVRAGP 66
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V Y GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ ++
Sbjct: 67 TKDNDVAWVYTKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKHKDD- 125
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
LY D +S + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 126 ---LAQLYSSADTESAVAARLQAGVVAQVKHCAAGWCHVAGDGFDGWIQQQRLWGVYADE 182
>gi|46202919|ref|ZP_00052391.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 197
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 15/189 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFE-------KKPLPRFVTIKASRANSRIG 70
+P + L A++ L P+ A S E K PLPR+ ++K +R N R G
Sbjct: 6 LPLVSPTRLAVLAALFAVLVPLTAESAPAPAPEVGKGPVTKLPLPRYASLKTNRVNLREG 65
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP--WNR 128
P + + + +GLPVE+V E+E WR+IRD +GT GW+ SLLSG+R+A+V P R
Sbjct: 66 PSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEGTEGWVLHSLLSGRRTAVVIPPSGER 125
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF------GYNLDTEGWIKKQ 182
+ L + D QS A+++PGV+ +++ C+G WC D +G+I++
Sbjct: 126 ADAAKATVPLTARADDQSAEQARLQPGVIGSVKSCTGTWCRLVVPLPDKRGDVDGYIRQS 185
Query: 183 KIWGIYPGE 191
++WG+YP E
Sbjct: 186 RLWGVYPDE 194
>gi|146337239|ref|YP_001202287.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146190045|emb|CAL74037.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 173
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G+ GW+
Sbjct: 36 PVPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGSEGWVYH 95
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+ N+ PI Y+ D S + A+++ GV+ +++C WC
Sbjct: 96 SLLSGRRTAVVTMKNKDDLAPI----YESADATSAVTARLQAGVVAQVKKCGNGWCRVLG 151
Query: 173 LDTEGWIKKQKIWGIYPGE 191
EGWI++Q++WG+Y E
Sbjct: 152 NGFEGWIQQQRLWGVYADE 170
>gi|75674235|ref|YP_316656.1| hypothetical protein Nwi_0036 [Nitrobacter winogradskyi Nb-255]
gi|74419105|gb|ABA03304.1| Protein of unknown function DUF1058 [Nitrobacter winogradskyi
Nb-255]
Length = 176
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 12/170 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKK--------PLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ F A + A++ E K P+PR+V++K+ N R GP V Y
Sbjct: 8 LSMVFAAATLGAVAIETTADAKDSALSTSGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVY 67
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ + P LY +
Sbjct: 68 TKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKAKDDFTP----LYDR 123
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
D+Q + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 124 ADVQGNVAARLQAGVVTQVKRCAAGWCHVTGDGFDGWIEQQRLWGVYADE 173
>gi|86747741|ref|YP_484237.1| hypothetical protein RPB_0615 [Rhodopseudomonas palustris HaA2]
gi|86570769|gb|ABD05326.1| Protein of unknown function DUF1058 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+F A+ AP A P+PR+V++K+ N RIGP V Y G
Sbjct: 10 LLFAGAMVGVAAPSFAAKDSPLSTSGLPVPRYVSLKSDHVNVRIGPTKDNDVAWVYTRAG 69
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+++ ++ LY+
Sbjct: 70 LPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKDKDE----LATLYESASTD 125
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
S + A+++ GV+ I+ C WC +GWI+KQ++WG+Y E K
Sbjct: 126 SAVAARLQAGVVAQIKRCDAVWCRIAGQGFDGWIEKQRLWGVYADEQVK 174
>gi|209883648|ref|YP_002287505.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
gi|209871844|gb|ACI91640.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
Length = 177
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+++ LA + + + + P+PR+V++K+ N R GP V Y
Sbjct: 12 AMLLALATWGMTGGTGQAAKDVQTTSGLPVPRYVSLKSDHVNVRGGPTKDQDVSWIYTRA 71
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V K + + + L +PD
Sbjct: 72 GLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVIM---KNKDELAV-LRDRPDE 127
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+S + A+++ GV+ ++ C+G WC +GWI++Q++WG+Y E
Sbjct: 128 ESAVAARLQAGVIAQVKRCTGTWCRIAGDGFDGWIRQQRLWGVYADE 174
>gi|182677505|ref|YP_001831651.1| hypothetical protein Bind_0510 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633388|gb|ACB94162.1| protein of unknown function DUF1058 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 192
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K+ R N R GP + + GLPVE+ E+E WR+IRD +G+ GW+
Sbjct: 55 PLPRYVSLKSDRVNLREGPSKDHRTTWVFQRAGLPVEITAEFETWRKIRDSEGSEGWVLH 114
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+++PW + P LY+KP S + AK++ V+ +R C G WC
Sbjct: 115 SLLSGRRTALIAPWKKGEEFP----LYEKPSDHSALRAKLQANVIAGVRRCDGTWCRLTG 170
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+G++++ +WG+YP E
Sbjct: 171 DGFDGYLQQALLWGVYPDE 189
>gi|170749094|ref|YP_001755354.1| hypothetical protein Mrad2831_2687 [Methylobacterium radiotolerans
JCM 2831]
gi|170655616|gb|ACB24671.1| protein of unknown function DUF1058 [Methylobacterium radiotolerans
JCM 2831]
Length = 187
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ LA AP K PLPR+ ++K R N R GP + + + G
Sbjct: 14 LVGGLATGARAAPPAGPEAGVGPVTKLPLPRYASLKTDRVNLREGPSKDHRTLWVFQRAG 73
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LPVE+V E+E WR+IRD +GT GW+ SLLSG+R+AIV+ K ++L K D
Sbjct: 74 LPVEIVGEFETWRRIRDSEGTEGWVLHSLLSGRRTAIVNAGPDKGAEKAAVSLRAKADDG 133
Query: 146 SIIVAKVEPGVLLTIRECSGEWC-----FGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ AK++ GV+ +++ C+G WC D +G+I++ ++WG+YP EV +
Sbjct: 134 ADDEAKLQTGVIGSVKSCTGTWCRMIVALPNKRDVDGYIRQNRLWGVYPNEVVE 187
>gi|299133360|ref|ZP_07026555.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
gi|298593497|gb|EFI53697.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
Length = 185
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+++ LA + + + + P+PR+V++K+ N R+GP V Y
Sbjct: 20 AMLMALATWGMTGGTGHAAKDVQTTSGLPVPRYVSLKSDHVNVRVGPTKDQDVSWIYTRA 79
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V+ KT + L P
Sbjct: 80 GLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVTM---KTKGELAA-LRDDPSE 135
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
S + A+++ GV+ ++ C+G+WC +GWI++Q++WG+Y E
Sbjct: 136 DSAVSARLQAGVIAQVKRCTGKWCRITGEGFDGWIEQQRLWGVYADE 182
>gi|209966396|ref|YP_002299311.1| hypothetical protein RC1_3134 [Rhodospirillum centenum SW]
gi|209959862|gb|ACJ00499.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 189
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 87/142 (61%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRF T+++ N R GPG+ Y V ++ G+PVE+ E++ WR+IRD++GT GW+++
Sbjct: 55 PIPRFATLRSDEVNLRTGPGVRYPVDWVFVRAGMPVEITAEFDTWRRIRDWEGTQGWVHR 114
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S+L G+RS +V+ R L ++P S VA+ EPGV+ + C G+WC
Sbjct: 115 SMLVGRRSFVVTGDIR--------TLRQEPGGSSPAVAQAEPGVMGRLNYCKGDWCRVEA 166
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
EGW+++ + WG+YP E K
Sbjct: 167 QGIEGWLRRGEFWGVYPDEEVK 188
>gi|27375878|ref|NP_767407.1| hypothetical protein blr0767 [Bradyrhizobium japonicum USDA 110]
gi|27349016|dbj|BAC46032.1| blr0767 [Bradyrhizobium japonicum USDA 110]
Length = 176
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R GP V Y GLPVE+ E+ENWR++RD +G GW+
Sbjct: 39 PVPRYVSLKSDHVNVRAGPTKDNDVAWVYTRAGLPVEITAEFENWRRVRDSEGAEGWVYH 98
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+ ++ PI Y + D S + AK++ GV+ +++CS WC
Sbjct: 99 SLLSGRRTAVVTMKHKDELAPI----YDRADPDSAVAAKLQAGVVTQVKKCSANWCRVTG 154
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+GWI+++++WG+Y E
Sbjct: 155 NGFDGWIQQERLWGVYSDE 173
>gi|85714163|ref|ZP_01045152.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
gi|85699289|gb|EAQ37157.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
Length = 176
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKK--PLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S++F+ A+ + + + P+PR+V++K+ N R GP V Y
Sbjct: 9 SMVFSAAMLSAIGIETTAAAKDSALSTSGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYT 68
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ K + LY +
Sbjct: 69 KAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVT---MKIKGDFAV-LYDRA 124
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
D+Q + A+++ GV+ ++ C+ WC +GWI+++++WG+Y E
Sbjct: 125 DVQGNVAARLQAGVVTQVKHCAAGWCHVAGDGFDGWIEQRRLWGVYADE 173
>gi|240137097|ref|YP_002961566.1| hypothetical protein MexAM1_META1p0337 [Methylobacterium extorquens
AM1]
gi|240007063|gb|ACS38289.1| conserved hypothetical protein precursor [Methylobacterium
extorquens AM1]
Length = 189
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +GT GW+
Sbjct: 38 KLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEGTEGWV 97
Query: 111 NKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C+G WC
Sbjct: 98 LHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGCTGSWC 157
Query: 169 F------GYNLDTEGWIKKQKIWGIYPGE 191
D +G+I++ ++WG+YP E
Sbjct: 158 RLVVPLPDKRGDVDGYIRQSRLWGVYPDE 186
>gi|163849872|ref|YP_001637915.1| hypothetical protein Mext_0422 [Methylobacterium extorquens PA1]
gi|218528503|ref|YP_002419319.1| hypothetical protein Mchl_0455 [Methylobacterium chloromethanicum
CM4]
gi|163661477|gb|ABY28844.1| protein of unknown function DUF1058 [Methylobacterium extorquens
PA1]
gi|218520806|gb|ACK81391.1| protein of unknown function DUF1058 [Methylobacterium
chloromethanicum CM4]
Length = 197
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +GT GW+
Sbjct: 46 KLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEGTEGWV 105
Query: 111 NKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C+G WC
Sbjct: 106 LHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGCTGSWC 165
Query: 169 F------GYNLDTEGWIKKQKIWGIYPGE 191
D +G+I++ ++WG+YP E
Sbjct: 166 RLVVPLPDKRGDVDGYIRQSRLWGVYPDE 194
>gi|241518642|ref|YP_002979270.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240863055|gb|ACS60719.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 184
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K +RA RIGP Y V Y GLP+E+ +EY NWRQ+RD DG GW+++
Sbjct: 46 PIPRFVSLKTTRARMRIGPAFEYAVKWLYQAPGLPLEITEEYGNWRQVRDSDGVSGWMHR 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGY 171
SLLS R+A++ PW ++T L + S A++E V + I C+ WC
Sbjct: 106 SLLSSNRTAVIGPWLKETT-----ALRAQARQNSFAKAELESRVRVQILSCTLSWCNVAL 160
Query: 172 NLD-TEGWIKKQKIWGIYPGEV 192
N D G+++K +WG+YP EV
Sbjct: 161 NKDHISGFVEKSALWGVYPQEV 182
>gi|254559109|ref|YP_003066204.1| hypothetical protein METDI0492 [Methylobacterium extorquens DM4]
gi|254266387|emb|CAX22151.1| conserved hypothetical protein precursor [Methylobacterium
extorquens DM4]
Length = 197
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +GT GW+
Sbjct: 46 KLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEGTEGWV 105
Query: 111 NKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C+G WC
Sbjct: 106 LHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSGEQARLQPGVIGSVKGCTGSWC 165
Query: 169 F------GYNLDTEGWIKKQKIWGIYPGE 191
D +G+I++ ++WG+YP E
Sbjct: 166 RLVVPLPDKRGDVDGYIRQSRLWGVYPDE 194
>gi|115522273|ref|YP_779184.1| hypothetical protein RPE_0245 [Rhodopseudomonas palustris BisA53]
gi|115516220|gb|ABJ04204.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisA53]
Length = 175
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G GW+
Sbjct: 38 PIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGAEGWVYH 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+++ N+ P+ Y + + S + AK++ GV+ I+ C+ WC
Sbjct: 98 SLLSGRRTAVITMKNKDDLAPV----YDEANPASSVAAKLQVGVVAQIKRCASGWCRVLG 153
Query: 173 LDTEGWIKKQKIWGIYPGE 191
EGWI+++++WG+Y E
Sbjct: 154 NGFEGWIQQERLWGVYADE 172
>gi|316931654|ref|YP_004106636.1| hypothetical protein Rpdx1_0260 [Rhodopseudomonas palustris DX-1]
gi|315599368|gb|ADU41903.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
DX-1]
Length = 174
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R+GP V Y GLPVEV E+ENWR++RD +G GW+
Sbjct: 37 PVPRYVSLKSDHVNVRVGPTKDNDVAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYH 96
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V ++ P LY++ S +VA+++ GV+ +R C +WC
Sbjct: 97 SLLSGRRTAVVIMKDKDELAP----LYERATAGSAVVARLQAGVVAQVRRCDMKWCRIVG 152
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+GWI+K ++WG+Y E
Sbjct: 153 SGFDGWIEKLQLWGVYADE 171
>gi|188579760|ref|YP_001923205.1| hypothetical protein Mpop_0492 [Methylobacterium populi BJ001]
gi|179343258|gb|ACB78670.1| protein of unknown function DUF1058 [Methylobacterium populi BJ001]
Length = 197
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +GT GW+
Sbjct: 46 KLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEGTEGWV 105
Query: 111 NKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
SLLSG+R+A+V P R + L + D QS A+++PGV+ +++ C+G WC
Sbjct: 106 LHSLLSGRRTAVVIPPSGERADAAKATVPLNARADEQSGEQARLQPGVIGSVKSCTGTWC 165
Query: 169 F------GYNLDTEGWIKKQKIWGIYPGE 191
D +G+I++ ++WG+YP E
Sbjct: 166 RLVVPLPDKRGDVDGYIRQSRLWGVYPDE 194
>gi|91974700|ref|YP_567359.1| hypothetical protein RPD_0218 [Rhodopseudomonas palustris BisB5]
gi|91681156|gb|ABE37458.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB5]
Length = 174
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N RIGP V Y GLPVE+ E+ENWR++RD +G GW+
Sbjct: 37 PVPRYVSLKSDHVNVRIGPTKDNDVAWVYTRAGLPVEITAEFENWRRVRDSEGAEGWVYH 96
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+++ ++ LY+ S + A+++ GV+ I+ C WC
Sbjct: 97 SLLSGRRTAVITMKDKDE----LATLYEAASTGSAVAARLQAGVVAQIKRCDPNWCRIIG 152
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+GWI+KQ++WG+Y E K
Sbjct: 153 SGFDGWIEKQRLWGVYADEQVK 174
>gi|220920423|ref|YP_002495724.1| hypothetical protein Mnod_0379 [Methylobacterium nodulans ORS 2060]
gi|219945029|gb|ACL55421.1| protein of unknown function DUF1058 [Methylobacterium nodulans ORS
2060]
Length = 187
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K R N R GP + + + GLPVE+V E+E WR+IRD +GT GW+
Sbjct: 43 PMPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVSEFETWRRIRDSEGTEGWVLH 102
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF--- 169
SLLSG+R+A+V K + LY +P+ + +VA+++ GV+ +I+ CSG WC
Sbjct: 103 SLLSGRRTAVVLAQGDKAAP---VPLYAEPEGRGGVVAQLQAGVIGSIKSCSGTWCRLIV 159
Query: 170 ---GYNLDTEGWIKKQKIWGIYPGE 191
D +G++++ ++WG+YP E
Sbjct: 160 ALPQKRGDVDGYLRQDRLWGVYPNE 184
>gi|39933500|ref|NP_945776.1| hypothetical protein RPA0423 [Rhodopseudomonas palustris CGA009]
gi|192288858|ref|YP_001989463.1| hypothetical protein Rpal_0427 [Rhodopseudomonas palustris TIE-1]
gi|39647346|emb|CAE25867.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192282607|gb|ACE98987.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
TIE-1]
Length = 174
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R+GP V Y GLPVEV E+ENWR++RD +G GW+
Sbjct: 37 PVPRYVSLKSDHVNVRVGPTKDNDVAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYH 96
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+ ++ P LY+ S +VA+++ GV+ ++ C +WC
Sbjct: 97 SLLSGRRTAVVTMKDKDGLAP----LYESASSGSAVVARLQAGVVAQVKRCDMKWCRIVG 152
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+GWI+K ++WG+Y E
Sbjct: 153 SGFDGWIEKLQLWGVYADE 171
>gi|90421877|ref|YP_530247.1| hypothetical protein RPC_0353 [Rhodopseudomonas palustris BisB18]
gi|90103891|gb|ABD85928.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB18]
Length = 175
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G GW+
Sbjct: 38 PIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGAEGWVYH 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG+R+A+V+ ++ P LY + S + A+++ GVL ++ C+ WC
Sbjct: 98 SLLSGRRTAVVTMKSKDELAP----LYDSASVTSPVAARLQAGVLTQVKRCAQGWCRVIG 153
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+GWI+++++WG+Y E
Sbjct: 154 NGFDGWIQQERLWGVYADE 172
>gi|15604641|ref|NP_221159.1| hypothetical protein RP809 [Rickettsia prowazekii str. Madrid E]
gi|3861336|emb|CAA15235.1| unknown [Rickettsia prowazekii]
gi|292572460|gb|ADE30375.1| hypothetical protein rpr22_CDS790 [Rickettsia prowazekii Rp22]
Length = 167
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARRGPTTKSAVEWVFIKKGEPVEITAEYEQWRQVRDINGECGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LS KRS I++ + I L K D +S ++AK+ P V ++++C E+C
Sbjct: 90 IHSSVLSAKRSVIIA-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEEFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D +GWI K+ IWG+Y
Sbjct: 143 VTCKDYKGWISKKAIWGVY 161
>gi|296446203|ref|ZP_06888150.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
gi|296256240|gb|EFH03320.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
Length = 180
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
LPRFV++K+ R N GP + + Y GLPVE+ E+E WR+IRD +GT GW+ S
Sbjct: 47 LPRFVSLKSDRVNLHEGPSKEHPTLWVYERAGLPVEITAEFETWRKIRDSEGTEGWVLHS 106
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG+R+A+V+PW ++ P + S +A++ PGV+ +R C G WC
Sbjct: 107 LLSGRRTALVAPWKKE---PALAYARDR----STPLARLSPGVVANLRLCDGSWCRVSGD 159
Query: 174 DTEGWIKKQKIWGIYPGE 191
+G++ ++ +WG+YPGE
Sbjct: 160 GFDGYVHQENLWGVYPGE 177
>gi|148251694|ref|YP_001236279.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
gi|146403867|gb|ABQ32373.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
Length = 137
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G+ GW+ S
Sbjct: 1 MPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGSEGWVYHS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG+R+A+V+ N +Y P + A+++ GV+ +++CS WC
Sbjct: 61 LLSGRRTAVVT----MKNKDDLAAVYDSPSASGAVTARLQVGVIAQVKKCSNGWCRVLGN 116
Query: 174 DTEGWIKKQKIWGIYPGE 191
+GWI++Q++WG+Y E
Sbjct: 117 GFDGWIEQQRLWGVYADE 134
>gi|154248046|ref|YP_001419004.1| hypothetical protein Xaut_4125 [Xanthobacter autotrophicus Py2]
gi|154162131|gb|ABS69347.1| protein of unknown function DUF1058 [Xanthobacter autotrophicus
Py2]
Length = 183
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++KA + N R GP + V + GLPVEV E+E WR+IRD DG GW+
Sbjct: 46 PVPRFVSLKADKVNVRNGPNKDHDVSWVFNRAGLPVEVTAEFETWRRIRDADGAEGWVYH 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S+LS +R+A+V+PW + P + P+ + +VA++EP VL ++ C G++C
Sbjct: 106 SMLSLRRTALVAPWLKGETVP----MRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLIG 161
Query: 173 LDTEGWIKKQKIWGIYPGE 191
+G++++ +++GIYP E
Sbjct: 162 DGFDGYVQQSQLFGIYPNE 180
>gi|83951771|ref|ZP_00960503.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
gi|83836777|gb|EAP76074.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
Length = 167
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+AI L+ +A S ++ PLPRFV++K S R GP + + + +P+E
Sbjct: 11 VAILPILSASVAASQDRGPVTNLPLPRFVSMKTSEGYVRRGPSRTHRIDWIFKQPNIPLE 70
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ E+ +WR++RD DG GW++ SLLSG R+ +V + L K+PD ++ IV
Sbjct: 71 ITAEHGHWRRVRDRDGAGGWMHYSLLSGARTVLV--------EQDMLQLRKQPDPKAPIV 122
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
A++E GV+ IRECS +WC +GW K +WG+ PGE+
Sbjct: 123 AQLELGVVARIRECSAQWCRLAVAGYKGWAPKSALWGVKPGEIL 166
>gi|254295396|ref|YP_003061419.1| hypothetical protein Hbal_3054 [Hirschia baltica ATCC 49814]
gi|254043927|gb|ACT60722.1| protein of unknown function DUF1058 [Hirschia baltica ATCC 49814]
Length = 197
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEI--FEKKPLPRFVTIKASRA 65
+L ++ + +P Q+ A L P + E+ I F P+PR+ ++K +
Sbjct: 24 LLSAMGMSAMVPAFAQSDFTIEPA---SLTPYVNPQQERRISKFSSMPVPRYASLKYNEV 80
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+GPG+ Y + Y GLPV VVKE +NWR+IRD G W+++ +L +R+ I S
Sbjct: 81 NGRLGPGLEYPIKWQYQRSGLPVLVVKESKNWRKIRDPQGDEVWVHQRMLGARRTGITS- 139
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
TN + +Y+KPD++++ +A+VE GV+ I EC G+WC GW + IW
Sbjct: 140 ----TN----VIMYQKPDLETLPIAEVEMGVVADIAECEGDWCRVDIDGRNGWAYRNSIW 191
Query: 186 GI 187
G+
Sbjct: 192 GV 193
>gi|254472303|ref|ZP_05085703.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
gi|211958586|gb|EEA93786.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
Length = 182
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++K+ R N R GP + + T++ LPVEVV+EY++WR+IRD++G GW+ K
Sbjct: 42 PVPRFVSLKSDRVNVRNGPSRKHDIGWTFVRSRLPVEVVQEYDDWRRIRDWEGKEGWVFK 101
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LL+G RSA+V+PW N L K+P IVA +EP VL + EC+ +C
Sbjct: 102 TLLTGYRSALVTPW--LVNTVETTPLRKRPGPNEEIVAFLEPLVLAGVVECTDGYCRISG 159
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
+ EGW+ + +++G+Y E
Sbjct: 160 KEFEGWVDQSRLFGVYKNET 179
>gi|170740471|ref|YP_001769126.1| hypothetical protein M446_2231 [Methylobacterium sp. 4-46]
gi|168194745|gb|ACA16692.1| protein of unknown function DUF1058 [Methylobacterium sp. 4-46]
Length = 194
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++K R N R GP + + + GLPVE+V E+ENWR+IRD +GT GW+
Sbjct: 50 PVPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVAEFENWRRIRDSEGTEGWVLH 109
Query: 113 SLLSGKRSAIV-SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-- 169
SLLSG+R+A+V +P ++ P LY + + +VA+++ GV+ +++ C+G WC
Sbjct: 110 SLLSGRRTAVVLAPGDKAAPVP----LYAEREGGGGVVAQLQAGVIGSVKSCNGTWCRLI 165
Query: 170 ----GYNLDTEGWIKKQKIWGIYPGE 191
D +G++++ ++WG+YP E
Sbjct: 166 VALPQKRGDVDGYMRQDRLWGVYPNE 191
>gi|85706632|ref|ZP_01037724.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
gi|85668690|gb|EAQ23559.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
Length = 167
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 11/170 (6%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ +FTL ++ P+ A + ++ PLPRFV++KA+ N R GP + + + + +
Sbjct: 9 AAVFTL---IFVGPLAATAEDRGPVTNLPLPRFVSMKAAEGNVRRGPSLTHRIDWIFKRR 65
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+E+ E+ +WR++RD DG GW++ +LLSG R+A V ++L +P+
Sbjct: 66 DMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVRTASV--------EVEMLDLLVRPEP 117
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+++VA++E GV+ + EC +WC +GW K +WG+ E F+
Sbjct: 118 DTMVVARLEQGVIARVEECKPDWCAISAAGYDGWAPKTALWGVKASETFE 167
>gi|239946793|ref|ZP_04698546.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921069|gb|EER21093.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 167
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGEGGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS I++ + I L K D +S ++AK+ P V +++C ++C
Sbjct: 90 IHSSVLSGKRSVIITSDKK-------IELTKSADPKSRVIAKLMPKVRCGLKKCKEQFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 143 ITCKDYTGWISKKVIWGVY 161
>gi|157964957|ref|YP_001499781.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
gi|157844733|gb|ABV85234.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
Length = 170
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 87/139 (62%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE++ EY+ WRQ+RD +G GW
Sbjct: 32 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEIIAEYKQWRQVRDINGEGGW 91
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 92 IHSSVLSGKRSVVIT-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEQFCQ 144
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 145 ITCKDYTGWISKKVIWGVY 163
>gi|229587172|ref|YP_002845673.1| hypothetical protein RAF_ORF1141 [Rickettsia africae ESF-5]
gi|228022222|gb|ACP53930.1| Unknown [Rickettsia africae ESF-5]
Length = 167
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 90 IHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 143 ITCKDYTGWISKKVIWGVY 161
>gi|15893174|ref|NP_360888.1| hypothetical protein RC1251 [Rickettsia conorii str. Malish 7]
gi|15620386|gb|AAL03789.1| unknown [Rickettsia conorii str. Malish 7]
Length = 167
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 90 IHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 143 ITCKDYTGWISKKVIWGVY 161
>gi|34581157|ref|ZP_00142637.1| hypothetical protein [Rickettsia sibirica 246]
gi|157829085|ref|YP_001495327.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933809|ref|YP_001650598.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238650857|ref|YP_002916712.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
gi|28262542|gb|EAA26046.1| unknown [Rickettsia sibirica 246]
gi|157801566|gb|ABV76819.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908896|gb|ABY73192.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238624955|gb|ACR47661.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
Length = 159
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GW
Sbjct: 22 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGW 81
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 82 IHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQ 134
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 135 ITCKDYTGWISKKVIWGVY 153
>gi|157826269|ref|YP_001493989.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
gi|157800227|gb|ABV75481.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
Length = 159
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K +PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GW
Sbjct: 22 KKLSIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGEGGW 81
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS I++ + I L K D +S ++AK+ P V +++C ++C
Sbjct: 82 IHSSVLSGKRSVIIT-------SDKEIELTKSVDSKSRVIAKLMPKVRCGLKKCKEQFCQ 134
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 135 ITCKDYTGWISKKAIWGVY 153
>gi|157826400|ref|YP_001495464.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
gi|157801704|gb|ABV78427.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
Length = 159
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ I F L I+ + +K P+PRFV+IK++ N+R GP + ++ KG PVE
Sbjct: 2 IKILFALIAIILSTTINADNKKLPIPRFVSIKSNEVNARSGPTTKAAIEWVFVKKGEPVE 61
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K +I+S ++
Sbjct: 62 IIAEYEQWRQVRDIHGESGWIHSSILSGRRSVIIIADQE-------IELLKHANIESRVI 114
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 115 AKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVY 153
>gi|288957055|ref|YP_003447396.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
gi|288909363|dbj|BAI70852.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
Length = 163
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFVT++ N R GP Y + + K +PVE+++E++ WR+IRD++G GW+++
Sbjct: 30 PIPRFVTVRVGEVNLRSGPNGSYPIEWVFKRKDMPVEIIQEFDTWRRIRDWEGAEGWVHQ 89
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S LSG+R ++ R +Y P S +VA+ EPGV+ ++++C +WC
Sbjct: 90 SALSGRRGVLIVGQTRA--------IYDAPRGDSAVVARAEPGVIGSLKKCRDDWCEVDV 141
Query: 173 LDTEGWIKKQKIWGIYPGE 191
GW+K+ WG Y GE
Sbjct: 142 KGYRGWMKRADFWGTYAGE 160
>gi|67459674|ref|YP_247298.1| hypothetical protein RF_1282 [Rickettsia felis URRWXCal2]
gi|67005207|gb|AAY62133.1| unknown [Rickettsia felis URRWXCal2]
Length = 167
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWLFVKKGEPVEITAEYEQWRQVRDINGEGGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V +++C ++C
Sbjct: 90 IHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCGLKKCKEQFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
+ GWI K+ IWG+Y
Sbjct: 143 ITCKNYTGWISKKVIWGVY 161
>gi|114765169|ref|ZP_01444313.1| hypothetical protein 1100011001332_R2601_15145 [Pelagibaca
bermudensis HTCC2601]
gi|114542444|gb|EAU45471.1| hypothetical protein R2601_15145 [Roseovarius sp. HTCC2601]
Length = 166
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+LI L + A + E+ PLPR+V++KAS N R GP + + + Y +
Sbjct: 5 ALIVGLMAALLTGTVSAATDERGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWIYTRR 64
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+E+ EY +WR++RD DG GW++ SLLSG R+ +V + L+ +PD
Sbjct: 65 DMPLEITAEYGHWRRVRDADGAGGWVHYSLLSGVRTVLV--------QQDMLELHGRPDA 116
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + AK+ GV+ + +C WC +GW K +WG+ P E+
Sbjct: 117 AAPVNAKLALGVVARLGKCETAWCELSAGGYDGWAPKSALWGVAPDEI 164
>gi|254460708|ref|ZP_05074124.1| aspartyl-trna synthetase [Rhodobacterales bacterium HTCC2083]
gi|206677297|gb|EDZ41784.1| aspartyl-trna synthetase [Rhodobacteraceae bacterium HTCC2083]
Length = 165
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A L A + E+ PLPRFV++KAS N R GP + + + + + +P+E+
Sbjct: 10 AGLLALVATTASASERGAVTNLPLPRFVSLKASEGNVRRGPSLTHRIDWVFKRRDMPLEI 69
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
E+ +WR++RD DG GW++ SLLSG R ++ + LY++ D + +VA
Sbjct: 70 TAEHGHWRRVRDRDGVGGWVHYSLLSGTRYVLI--------EQDMLALYQRADPATPVVA 121
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
++E GV+ + +C EWC + +GW KQ +WG+ P E+
Sbjct: 122 RLELGVIARLGKCGPEWCRLSSSGYKGWAPKQSLWGVQPEEL 163
>gi|126732185|ref|ZP_01747986.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
gi|126707267|gb|EBA06332.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
Length = 164
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI + + + +L+ E+ PLPRFV++KA+ N R GP + + + Y +
Sbjct: 4 LILSAILSLNVLATASLAAERGPVTNLPLPRFVSMKAAEVNVRRGPSLSHRIDWVYKRRD 63
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+P+E+ EY +WR++RD DG GW++ +LLSG R+ IV + + L+K+P+
Sbjct: 64 MPLEITAEYGHWRRVRDRDGAGGWVHYALLSGVRTVIV--------DQDMLALHKRPEAD 115
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
S + A++E GV+ + EC +WC GW K +WG+ E+
Sbjct: 116 SNVTARLEMGVIARLGECGIDWCELSADGYRGWADKSALWGVGLDEI 162
>gi|126725836|ref|ZP_01741678.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
gi|126705040|gb|EBA04131.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
Length = 167
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S++F I + +A + + PLPRFV++KAS N R GP + + + + +
Sbjct: 6 SVLFLALILAATSSGIADENPRGSVTNLPLPRFVSLKASEGNVRRGPSLAHKIDWVFKHR 65
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+++V EY NWR+I+D DG GW++ SLLSG R I++ P+YI D
Sbjct: 66 NMPLQIVGEYGNWRRIKDRDGAGGWMHYSLLSGSRMVIIN----GDRTPLYI----LADE 117
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+S A+ E G L + +CS WCF + +GWI K +WG+ E+
Sbjct: 118 KSKKSAEAEDGALAKLEDCSLHWCFVRADNAKGWIPKSALWGVDEDEI 165
>gi|126461755|ref|YP_001042869.1| hypothetical protein Rsph17029_0986 [Rhodobacter sphaeroides ATCC
17029]
gi|126103419|gb|ABN76097.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17029]
Length = 203
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G GW++
Sbjct: 70 PLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAGGWVHY 129
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+A+V +L++ P S + + GV++ + EC +WC
Sbjct: 130 ALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRDWCRVSA 181
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ K +WG+ P E+ +
Sbjct: 182 DGNRGWVIKTALWGVDPDEILQ 203
>gi|221638733|ref|YP_002524995.1| hypothetical protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
gi|221159514|gb|ACM00494.1| Hypothetical Protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
Length = 191
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G GW++
Sbjct: 58 PLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAGGWVHY 117
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+A+V +L++ P S + + GV++ + EC +WC
Sbjct: 118 ALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRDWCRVSA 169
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ K +WG+ P E+ +
Sbjct: 170 DGNRGWVIKTALWGVDPDEILQ 191
>gi|91204831|ref|YP_537186.1| hypothetical protein RBE_0016 [Rickettsia bellii RML369-C]
gi|91068375|gb|ABE04097.1| unknown [Rickettsia bellii RML369-C]
Length = 159
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ I F L I+ + +K P+PRFV+IK++ N+R GP + ++ KG PVE
Sbjct: 2 IKILFALIAIILSTTINADNKKLPIPRFVSIKSNEVNARSGPTTKAAIEWVFVKKGEPVE 61
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K +I+S ++
Sbjct: 62 IIAEYEQWRQVRDIHGESGWIHSSVLSGRRSVIIIADQE-------IELLKYANIESRVI 114
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 115 AKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVY 153
>gi|146278224|ref|YP_001168383.1| hypothetical protein Rsph17025_2188 [Rhodobacter sphaeroides ATCC
17025]
gi|145556465|gb|ABP71078.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G GW++
Sbjct: 64 PLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAGGWVHY 123
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG RSA+V +L++ P S + V+ GV++ + C +WC
Sbjct: 124 SLLSGVRSAMVV--------AEMADLHEDPASGSTVTVHVQRGVVVRLLSCIRDWCRVSA 175
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ K +WG+ P E+ +
Sbjct: 176 EGNRGWVIKTALWGVDPAEILE 197
>gi|77462863|ref|YP_352367.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332557754|ref|ZP_08412076.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
gi|77387281|gb|ABA78466.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332275466|gb|EGJ20781.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
Length = 191
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G GW++
Sbjct: 58 PLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAGGWVHY 117
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+A+V +L++ P S + + GV++ + EC +WC
Sbjct: 118 ALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRDWCRVSA 169
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ K +WG+ P E+ +
Sbjct: 170 DGNRGWVIKTALWGVDPDEILQ 191
>gi|296531931|ref|ZP_06894730.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
gi|296267741|gb|EFH13567.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
Length = 164
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 10/141 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++++ N RIGP + + TY + +PVE+++EY WR+IRD DGT GW+++
Sbjct: 29 PIPRFVSLRSDEVNLRIGPDTRFPIEWTYQRRDMPVEILREYNQWRRIRDIDGTEGWVHQ 88
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
S L+G+R+ +V R NL++ S +VA++ PGV+ IR C + WC
Sbjct: 89 STLAGRRTFLVRGQER--------NLHRSEGEGSAVVARLMPGVVGRIRRCQAASRWCEV 140
Query: 171 YNLDTEGWIKKQKIWGIYPGE 191
D G + + +IWG+ P E
Sbjct: 141 QVGDHRGHMLRSEIWGVGPDE 161
>gi|119384675|ref|YP_915731.1| hypothetical protein Pden_1942 [Paracoccus denitrificans PD1222]
gi|119374442|gb|ABL70035.1| protein of unknown function DUF1058 [Paracoccus denitrificans
PD1222]
Length = 200
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K N+R GP + + + + G+P+ VV E+ +WR++ D DG GW++
Sbjct: 67 PLPRYVSLKGGEGNARRGPSLSHRIDWVFRHAGMPLRVVAEFGHWRRVEDQDGAGGWVHY 126
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+AIV+ ++L +P+ ++ +VA+ E G ++ + EC +WC
Sbjct: 127 SLLSGVRTAIVT--------KDMLDLLARPEPRASVVARAEAGAIVRLHECIVDWCRVSG 178
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
+GW+ K IWG+ P E+
Sbjct: 179 GGEKGWVPKTTIWGVDPDEI 198
>gi|83944892|ref|ZP_00957258.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
gi|83851674|gb|EAP89529.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
Length = 196
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP A + + F P+PRFV++K + R GP + V Y KGLP+EVV E +
Sbjct: 16 APESASAQTCDTFSGLPVPRFVSLKFNETRGRAGPSFTHPVAWLYQRKGLPMEVVAETPD 75
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
WR++RD +G W+++ L+G+RS S R L +PD + ++A VE G
Sbjct: 76 WRRVRDPEGEEVWMHRRTLTGRRSVWASEATR---------LLSRPDTDASLIADVEAGA 126
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+L + C WC D GW + WG+YP E
Sbjct: 127 VLWLERCRAGWCRLEADDRRGWARADAFWGVYPEET 162
>gi|144898306|emb|CAM75170.1| secreted protein containing DUF1058 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 166
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++K+ N R GPG+ Y + YL K LPVEVV E+E WR+IRD++G GW+++
Sbjct: 30 PLPRFVSLKSDEVNLRAGPGVRYPIDWIYLRKDLPVEVVAEFEAWRKIRDWEGAEGWVHQ 89
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII-VAKVEPGVLLTIREC--SGEWCF 169
S+LSG+R +V P ++ + D S VA+V PG L + C + ++C
Sbjct: 90 SMLSGRRMMVVI-----GGQP---HVLRASDADSADPVAQVAPGALGRVVNCPRNRDFCR 141
Query: 170 GYNLDTEGWIKKQKIWGIYPGE 191
T+GW+++ ++WG+Y GE
Sbjct: 142 VELNQTQGWLRRDQMWGVYKGE 163
>gi|149914051|ref|ZP_01902583.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
gi|149812335|gb|EDM72166.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
Length = 166
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++KAS N R GP + + + + + +P+E+ E+ +WR++RD DG GW++
Sbjct: 33 PLPRYVSMKASEGNVRRGPSLTHRIDWVFKRRDVPLEITAEHGHWRRVRDRDGAGGWVHY 92
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+AIV ++L+ +PD + + A++E GV+ I+ C+ +WC
Sbjct: 93 SLLSGSRTAIV--------ERDMLDLHVRPDPSTRVTARLELGVIARIKSCAPDWCEISA 144
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+GW K IWG+ E+ +
Sbjct: 145 GGYDGWAPKSAIWGVGADEILE 166
>gi|163737042|ref|ZP_02144460.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
gi|161389646|gb|EDQ13997.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
Length = 254
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPIL-ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
Y+ L + +A+ L P+ A E+ PLPRFV++KA+ N R GP + +
Sbjct: 84 YLRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTH 143
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++
Sbjct: 144 KIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGARTVLI--------EEDM 195
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 196 LTVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|163740534|ref|ZP_02147928.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
gi|161386392|gb|EDQ10767.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
Length = 254
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPIL-ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
Y+ L + +A+ L P+ A E+ PLPRFV++KA+ N R GP + +
Sbjct: 84 YLRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTH 143
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++
Sbjct: 144 KIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGARTVLI--------EEDM 195
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 196 LTVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|86136265|ref|ZP_01054844.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
gi|85827139|gb|EAQ47335.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
Length = 155
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 9/157 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
LA ++A S E+ PLPR+V++KA+ AN R GP + + + + +G+P+EV E+
Sbjct: 6 LASMVAAS-ERGPVTNFPLPRYVSMKAAEANVRRGPSLTHRIDWVFKRRGMPLEVTAEFG 64
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+WR++RD DG GW++ +LLSG R+ +V + L+ + D Q+ + A +E G
Sbjct: 65 HWRRVRDQDGAGGWVHYALLSGARTVLV--------QEDMLTLHARADEQAPVTAALEYG 116
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
V+ + +C+ WC GW K K+WG+ P E+
Sbjct: 117 VVARLGDCALTWCEVSVGGFSGWAPKSKLWGVMPDEI 153
>gi|163744590|ref|ZP_02151950.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
gi|161381408|gb|EDQ05817.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
Length = 169
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+++L+ + ++P A + PLPRFV++KAS N R GP + + + Y
Sbjct: 6 LRSTLLVGALLLAQMSPG-ATEEARGQVTNLPLPRFVSLKASEGNVRRGPSLSHRIDWVY 64
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ LP+ + E+ +WR+I D DG GW++ SLLSG R+ +V + L+
Sbjct: 65 KRRDLPLRITAEHGHWRRIEDRDGMGGWVHYSLLSGTRTVLV--------EQDMLQLHVN 116
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
PD ++ +VA++E GV+ + EC+ EWC + GW K ++WG+ P E+
Sbjct: 117 PDPKAAVVARLELGVVARLGECTLEWCELRSGGFTGWAPKVRLWGVGPKEL 167
>gi|126737359|ref|ZP_01753094.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
gi|126721944|gb|EBA18647.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
Length = 174
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 25 SLIFTLAIYFYLAPILAL--SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + +LAI F +API ++ PLPR+V++KAS N R GP + + + +
Sbjct: 12 AAVLSLAI-FVVAPISEAWAKGKRGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWVFK 70
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++ + ++ P
Sbjct: 71 RRGMPLEITAEYGHWRRVRDQDGAGGWVHYALLSGVRTVLI--------QEDMLTVHAHP 122
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ Q+ I A E GV+ + EC+ WC GW K K+WG+ P EV
Sbjct: 123 NPQAPITAAFEYGVVARLGECAEAWCEITAGGYSGWAPKSKLWGVAPEEV 172
>gi|163796742|ref|ZP_02190700.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
gi|159177996|gb|EDP62543.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
Length = 165
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+VT++A N R GPG+ Y + Y LPVEV+ E++ WR+IRD DGT GW+++
Sbjct: 31 PIPRYVTLRAKEVNVRAGPGVRYPIEWVYQRPNLPVEVIAEFDTWRKIRDPDGTEGWVHQ 90
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LSG+R+ +V R L + P+ + VA++E GV+ + C +WC
Sbjct: 91 QMLSGRRAVLVIGAERL--------LRRTPEPNAPTVARLEIGVIGWLDGCRQDWCEVDV 142
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+GWI + IWG+ E K
Sbjct: 143 AGMDGWIPRSHIWGVRADEALK 164
>gi|260575389|ref|ZP_05843388.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
gi|259022309|gb|EEW25606.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
Length = 195
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+VT+K N+R GPG+ + + + G+P+ + EYE+WR++ D +G GW++
Sbjct: 62 PLPRYVTLKNGEGNARRGPGLTHRIDWVFTRVGMPLRITAEYEHWRRVEDAEGAGGWVHY 121
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG RS +V+ + I+ + PD + ++A+ E GV+ + EC +WC
Sbjct: 122 SLLSGVRSVLVA------QDMAGIHAWPAPDGE--VIAQAELGVIAKLLECLPDWCRIAV 173
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
+GW+ K +WG+ PGEV +
Sbjct: 174 DGEKGWVPKAALWGVDPGEVIE 195
>gi|51473978|ref|YP_067735.1| hypothetical protein RT0797 [Rickettsia typhi str. Wilmington]
gi|51460290|gb|AAU04253.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 168
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N R GP V ++ KG PVE+ EY WRQI D +G GW
Sbjct: 31 KKLPIPRFVSIKSNEVNVRRGPTTKSAVEWVFIKKGEPVEITAEYAQWRQICDINGECGW 90
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LS KRS I+ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 91 IHSSVLSSKRSVIIV-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEQFCQ 143
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D +GWI K IWG+Y
Sbjct: 144 ITCKDYKGWISKNAIWGVY 162
>gi|84686302|ref|ZP_01014197.1| hypothetical protein 1099457000256_RB2654_08862 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665829|gb|EAQ12304.1| hypothetical protein RB2654_08862 [Rhodobacterales bacterium
HTCC2654]
Length = 169
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 29 TLAIYFYLAPILAL--------SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
T A ++A +L L + E+ P+PRFV++K S AN R GP + + +
Sbjct: 4 TGAFLAFMAVVLGLIVSGAEARAAERGSVTNMPIPRFVSLKVSEANVRRGPSLTHKIDWV 63
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ +G+P+EV E+ +WR+++D DG GW++ SL+SG R+AIV + P+ +
Sbjct: 64 FTRRGMPLEVTGEFGHWRRVQDRDGVGGWVHYSLISGARTAIVD----RDLAPVLVRAAA 119
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ A++E GV++ + +C WC GW+++ +WG+ PGEV +
Sbjct: 120 DGQVK----ARLEAGVIVNMDKCGPVWCRVKVGGYRGWMERSALWGLKPGEVIE 169
>gi|254463970|ref|ZP_05077381.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
gi|206684878|gb|EDZ45360.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
Length = 165
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++KA+ N R GP + + + + +G+P+E+ EY +WR+++D DG GW++
Sbjct: 32 PLPRYVSMKAATGNVRRGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVQDRDGAGGWVHY 91
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ +V + ++ +PD ++ + A E GV+ + EC EWC
Sbjct: 92 ALLSGVRTVLV--------EEDMLTVHARPDTRAPVTAAFELGVVARLGECETEWCEISA 143
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW K+K+WG+ P E+
Sbjct: 144 GGYSGWAPKKKLWGVAPDEL 163
>gi|255264111|ref|ZP_05343453.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
gi|255106446|gb|EET49120.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
Length = 166
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E+ P+PRFV++KAS N R GP + + + + + +P+E+ EY NWR++RD
Sbjct: 23 AQERGPVTNLPIPRFVSLKASEGNVRRGPSLSHRIDWVFKRRDMPLEITAEYGNWRRVRD 82
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+G GW++ SLLSG R+ I+ + + LY +PD + A++E GV+ + E
Sbjct: 83 REGQGGWVHYSLLSGTRTVII--------DADLLTLYARPDPNAPENARLEAGVVARLGE 134
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
C WC GW K +WG+ P E+
Sbjct: 135 CQPAWCRLNAGGYRGWAPKSALWGVKPSEL 164
>gi|157804187|ref|YP_001492736.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
gi|157785450|gb|ABV73951.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
Length = 159
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP + ++ KG PVE++ EYE WRQ+RD +G GW
Sbjct: 22 KKLPVPRFVSIKSNEVNARSGPTTKSAIEWVFIKKGEPVEIIAEYEQWRQVRDINGEGGW 81
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +V I L K + +S ++ K+ P V +++C ++C
Sbjct: 82 IHSSVLSGKRSVVVI-------GDKEIELTKSVNPKSRVIVKLMPKVRCGLKKCKEQFCQ 134
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D GWI K+ IWG+Y
Sbjct: 135 ITCKDYTGWISKKVIWGVY 153
>gi|46201496|ref|ZP_00054934.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E WR+IRD+ GT GW+++
Sbjct: 34 PLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFEAWRKIRDWQGTEGWLHQ 93
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
S+LSG+R +V R L + +A+VEPGVL + +C + ++C
Sbjct: 94 SMLSGRRMMVVMGSQR--------TLRASDSDNADALAQVEPGVLGRLLQCPRNRDFCRV 145
Query: 171 YNLDTEGWIKKQKIWGIYPGE 191
+GW K+ +IWG+Y GE
Sbjct: 146 EINQIQGWFKRDEIWGVYKGE 166
>gi|254476612|ref|ZP_05089998.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
gi|214030855|gb|EEB71690.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
Length = 178
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA+ N R GP + + + + +G+P+E+ EY +WR++RD DG GW++
Sbjct: 45 PLPRFVSMKAAEGNVRRGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHY 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ +V + + +P++ + + A E GV+ + +C +WC
Sbjct: 105 ALLSGARTVLV--------EEDMLTVRARPEVNAPVTAAFEMGVVARLGKCHLDWCSISA 156
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW K+K+WG+ P E+
Sbjct: 157 GGYRGWAPKEKLWGVAPDEL 176
>gi|83954721|ref|ZP_00963432.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
gi|83841005|gb|EAP80176.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
Length = 168
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 18 MPKILQNSLIFTLA-IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M +L++ L+ TLA ++ P+ A E P+PRFV++KAS N R GP + +
Sbjct: 1 MKPMLRSVLLGTLAAVHLCTTPVFA--QEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHR 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + + LP+ + E+ +WR++ D DG GW++ SLLSG R+ +V +
Sbjct: 59 IDWVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTRTVLV--------EQDRL 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 111 QLLVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|83943719|ref|ZP_00956177.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
gi|83845399|gb|EAP83278.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
Length = 168
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 18 MPKILQNSLIFTLA-IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M +L++ L+ LA ++ P+ A E P+PRFV++KAS N R GP + +
Sbjct: 1 MKPMLRSVLLGALAAVHLCTTPVFA--QEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHR 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + + LP+ + E+ +WR++ D DG GW++ SLLSG R+ +V +
Sbjct: 59 IDWVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTRTVLV--------EQDRL 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 111 QLLVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|294085136|ref|YP_003551896.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664711|gb|ADE39812.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 154
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFVTIK +AN R GPG Y V+ Y GLPV V E+ WR++ D +GT GW+
Sbjct: 21 PIPRFVTIKFEKANLRAGPGSEYPVLWQYRRLGLPVLVDAEFGVWRKVVDHEGTSGWMRG 80
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLL KR+A V+ I + + + ++ ++A E G LL + C +WC +
Sbjct: 81 SLLGLKRNAFVTKG--------VIKIRAQDNQEARVIAVAERGALLDLETCPKQWCRVAH 132
Query: 173 LDTEGWIKKQKIWGIYPGEVF 193
D GW+ + IWGI GEV
Sbjct: 133 GDITGWVPRHSIWGIMDGEVI 153
>gi|294676080|ref|YP_003576695.1| hypothetical protein RCAP_rcc00523 [Rhodobacter capsulatus SB 1003]
gi|294474900|gb|ADE84288.1| protein of unknown function DUF1058 [Rhodobacter capsulatus SB
1003]
Length = 206
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+A LA+ + + PLPR+V++K S N+R GP + + + + G+P+ V E+
Sbjct: 56 VAQALAVQNGRGPVTNLPLPRYVSLKGSEGNARRGPSLSHRIDWVFTHPGMPLRVTAEFG 115
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+WR++ D DG GW++ +LLSG R+ IV L+ + D +S +VA E G
Sbjct: 116 HWRRVEDRDGAGGWVHYALLSGVRTVIV--------EDDMTELHARADAKSAVVALAEMG 167
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + C+ +WC + +GW+ K IWG+ E+
Sbjct: 168 AVAQLENCTPDWCEISAEEADGWVPKTAIWGVDADEI 204
>gi|83309293|ref|YP_419557.1| hypothetical protein amb0194 [Magnetospirillum magneticum AMB-1]
gi|82944134|dbj|BAE48998.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 174
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E WR+IRD+ GT GW+++
Sbjct: 39 PLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFEAWRKIRDWQGTEGWLHQ 98
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
S+LSG+R +V R L + +A VEPGVL + +C + ++C
Sbjct: 99 SMLSGRRMMVVMGGQR--------TLRAGDSENADALALVEPGVLGRLLQCPRNRDFCRV 150
Query: 171 YNLDTEGWIKKQKIWGIYPGE 191
+GW K+ +IWG+Y GE
Sbjct: 151 EINQIQGWFKRDEIWGVYKGE 171
>gi|89053405|ref|YP_508856.1| hypothetical protein Jann_0914 [Jannaschia sp. CCS1]
gi|88862954|gb|ABD53831.1| protein of unknown function DUF1058 [Jannaschia sp. CCS1]
Length = 190
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+VT++A+ N+R GP + + + + +P+ VV E+ +WR++ D DG GW++
Sbjct: 57 PIPRYVTMRATEGNARRGPSRSHRIDWVFTRRHMPMMVVAEHGHWRRVVDRDGAGGWMHY 116
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG RSAIV +T+ + L+ +PD S I A E GV + EC WC
Sbjct: 117 SLLSGNRSAIV-----ETD---MLPLHARPDAASNIRAHAEMGVTGHLDECIPGWCRLEV 168
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ +WG+ P EVF
Sbjct: 169 GGFAGWVDASALWGVDPDEVFD 190
>gi|114571600|ref|YP_758280.1| hypothetical protein Mmar10_3061 [Maricaulis maris MCS10]
gi|114342062|gb|ABI67342.1| protein of unknown function DUF1058 [Maricaulis maris MCS10]
Length = 188
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ +PRFV++K AN R GP + + YL GLP+EV+ E +WR++RD +G + W++
Sbjct: 32 QAVPRFVSLKVDVANGRSGPSSQHPIAWRYLRAGLPMEVIAETPDWRRVRDPEGEVTWMH 91
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S+LSG+RS L+ + S I A E GV+L++ C WC
Sbjct: 92 RSILSGRRSVYTLE---------ETTLHARDSDSSPIEAVAEAGVILSLERCRTGWCRVE 142
Query: 172 NLDTEGWIKKQKIWGIYPGEV 192
GW++ +WG+YP E+
Sbjct: 143 GQGFRGWVRPHTLWGVYPQEL 163
>gi|260429234|ref|ZP_05783211.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
gi|260419857|gb|EEX13110.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
Length = 166
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E+ P+PRFV++KA N R GP + + + Y +G+P+EV EY +WR++
Sbjct: 21 SATEERGAVTNLPIPRFVSLKAGETNVRRGPSLTHRIDWVYKRRGMPLEVTAEYGHWRRV 80
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW++ SL+SG R+ +V + L+ +P + AK+ GV+ +
Sbjct: 81 RDVDGAGGWVHYSLISGVRTVLV--------EDDMLELHSRPGDNMPVEAKLAVGVIAKL 132
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGI 187
+C+ +WC EGW K +WG+
Sbjct: 133 GDCTVDWCEISAGGYEGWAHKAALWGV 159
>gi|83595118|ref|YP_428870.1| hypothetical protein Rru_A3789 [Rhodospirillum rubrum ATCC 11170]
gi|83578032|gb|ABC24583.1| Protein of unknown function DUF1058 [Rhodospirillum rubrum ATCC
11170]
Length = 186
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF ++++++ N R GPG Y VV T+ +G+P+E++ EY+NWR+IRD +G+ GW+++
Sbjct: 51 PLPRFASLRSAQINMRSGPGTRYPVVWTFQKRGIPIEILAEYDNWRKIRDPEGSEGWVHR 110
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
+LSG+R+ + P L P ++S +A++EPGV+ + C + +C
Sbjct: 111 HMLSGERTFLT------IGGPQI--LRSDPSVESRPLARLEPGVIGKLLTCPRATAYCRA 162
Query: 171 YNLDTEGWIKKQKIWGIYPGEVF 193
GW+ + WG+Y E
Sbjct: 163 DVGGYLGWLARDAFWGLYRDETL 185
>gi|110680608|ref|YP_683615.1| hypothetical protein RD1_3438 [Roseobacter denitrificans OCh 114]
gi|109456724|gb|ABG32929.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 178
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++KAS AN R GP + + + + + +P+ +V E+ +WR++ D DG GWI+
Sbjct: 46 PMPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHY 105
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+ IV + ++ +P+ ++ + A++E GV+ + +C+ +WC +
Sbjct: 106 SLLSGVRTVIVEE---------TLTIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRS 156
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P E+
Sbjct: 157 GGFRGWSPKTSLWGVRPDEL 176
>gi|254437485|ref|ZP_05050979.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252931|gb|EDY77245.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 186
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
SL ++A Y + PI A+ ++ P+PR+V++KA+ AN R GP + + + + +
Sbjct: 25 SLAHSVAAYEAVVPITAVQSDRGPVTNLPMPRYVSLKANEANVRRGPSLSHRIDWVFQRR 84
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+ VV E+ +WR++ D +G GW++ SLLSG R+ I+ + + L +PD
Sbjct: 85 DMPLRVVGEFGHWRRVVDREGMGGWVHYSLLSGNRTVII--------DRDLLVLRGQPDA 136
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ VA +E GV+ + EC +WC GW K ++G+ E+
Sbjct: 137 DATEVAMLELGVIADLGECHIDWCRLRADGHRGWALKAAMFGVGADEL 184
>gi|56551642|ref|YP_162481.1| hypothetical protein ZMO0746 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260752770|ref|YP_003225663.1| hypothetical protein Za10_0530 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543216|gb|AAV89370.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552133|gb|ACV75079.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 177
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
RK + Q + ++F ++P+ A+ H LP + +I AS A R GPG
Sbjct: 11 RKLFCAVAQFFIFCLCPVFFIMSPLSAAVIHTT-------LPYWASISASEAFMRSGPGA 63
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R+AI+ N
Sbjct: 64 NYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRRTAIL-------NGV 116
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
NLY +P + ++ + E GV+ + +C WC G+I + +WG+ P E
Sbjct: 117 GIQNLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVDPNEEI 176
Query: 194 K 194
K
Sbjct: 177 K 177
>gi|163732362|ref|ZP_02139808.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
gi|161394660|gb|EDQ18983.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
Length = 132
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++KAS AN R GP + + + + + +P+ +V E+ +WR++ D DG GWI+ S
Sbjct: 1 MPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG R+ IV +N++ +P+ S + A +E GV+ + +C +WC +
Sbjct: 61 LLSGVRTVIVEE---------TLNIHSRPNTDSPVNAMLEAGVIARLGKCEPDWCQVRSG 111
Query: 174 DTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P EV
Sbjct: 112 GFRGWTPKTLLWGVLPDEV 130
>gi|241761231|ref|ZP_04759319.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374138|gb|EER63635.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 177
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
RK + Q + ++F ++P+ A+ H LP + +I AS A R GPG
Sbjct: 11 RKLFCAVAQFFIFCLCPVFFIISPLSAAVIHTT-------LPYWASISASEAFMRSGPGA 63
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R+AI+ N
Sbjct: 64 NYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRRTAIL-------NGV 116
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
NLY +P + ++ + E GV+ + +C WC G+I + +WG+ P E
Sbjct: 117 GIQNLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVDPNEEI 176
Query: 194 K 194
K
Sbjct: 177 K 177
>gi|254511634|ref|ZP_05123701.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
gi|221535345|gb|EEE38333.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
Length = 163
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 13/167 (7%)
Query: 27 IFTLAIYFYLAPILALSHEKE-IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+F LA L + A + EK PLPR+V++KA+ N R GP + + + + +G
Sbjct: 7 VFLLA----LGTVTASAQEKRGPVTNLPLPRYVSMKAAEGNVRRGPSLTHRIDWVFKRRG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+P+++ EY NWR+++D DG GW++ +LLSG R+ ++ + +Y PD
Sbjct: 63 MPLQITAEYGNWRKVQDRDGAGGWVHYALLSGVRTVLI--------EAELLPVYALPDPN 114
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + A E GV+ + ECS +WC GW K +WG+ E+
Sbjct: 115 TQVNAHFETGVVARLEECSPDWCRISAGGYRGWTLKTNLWGVDSSEI 161
>gi|56695536|ref|YP_165886.1| hypothetical protein SPO0631 [Ruegeria pomeroyi DSS-3]
gi|56677273|gb|AAV93939.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 174
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 10/165 (6%)
Query: 30 LAIYFYLAPILALSHE--KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L+ LAP+ + E + P+PRFV++KA+ N R GP + + + + + +P
Sbjct: 16 LSALVTLAPVAPQAQEAVRGAVTNLPIPRFVSMKANEGNVRRGPSLTHRIDWVFKRRDMP 75
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+++ E+ +WR+++D DG GW++ +LLSG R+ +V K P LY +PD S
Sbjct: 76 LQITAEHGHWRKVQDRDGAGGWVHYALLSGVRTVLVE----KDMMP----LYARPDPASQ 127
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ A E GV+ + C+ +WC GW K+ +WG+ E+
Sbjct: 128 VAAHFEMGVVARLGTCTQDWCRISAGGYRGWAPKENLWGVGTDEI 172
>gi|99080320|ref|YP_612474.1| hypothetical protein TM1040_0479 [Ruegeria sp. TM1040]
gi|99036600|gb|ABF63212.1| protein of unknown function DUF1058 [Ruegeria sp. TM1040]
Length = 200
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++KA+ N R GP + + + + +G+P+EV EY +WR++RD DG GW++
Sbjct: 67 PLPRYVSMKAAEGNVRRGPSLNHRIDWVFKRRGMPLEVTAEYGHWRRVRDRDGQGGWVHY 126
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ +V + + +P + VA E GV+ + C+ +WC
Sbjct: 127 ALLSGVRTVLV--------EQDLVQVRARPQEDAPAVAAFELGVVAQLGACTRDWCEITA 178
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P E+
Sbjct: 179 GGHSGWTHKDNLWGVDPDEL 198
>gi|254487979|ref|ZP_05101184.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
gi|214044848|gb|EEB85486.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
Length = 168
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA+ N R GP + + + + + +P+++ E+ +WR++ D DG GW++
Sbjct: 35 PLPRFVSMKAAEGNVRRGPSLTHRIDWVFKHRDMPLQITAEHGHWRRVEDRDGMGGWVHY 94
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+ ++ ++ L +PD + + A+ E G + + C EWCF
Sbjct: 95 SLLSGTRTVLI--------EQDHLRLLVRPDPNAPVAAEFELGAIARLGACDLEWCFLRA 146
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
+GW K ++WG+ E+
Sbjct: 147 DGYKGWAPKARLWGVGAAEL 166
>gi|89069642|ref|ZP_01156981.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
gi|89044840|gb|EAR50940.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
Length = 163
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++K S N R GP + + + + +P+ V EY +WR++ D DG GW++
Sbjct: 30 PLPRYVSLKTSEGNLRRGPSLSHRIDWVLTRRNMPLRVTAEYGHWRRVIDRDGVGGWVHY 89
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+ IV ++L +PD + VA+ E GV+ I EC +WC
Sbjct: 90 SLLSGVRTVIV--------EADELSLLGRPDAAAPEVARFERGVVARIDECLPDWCRLSA 141
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW K WG+ PGEV
Sbjct: 142 GGYRGWAPKGAYWGVEPGEVLD 163
>gi|260432586|ref|ZP_05786557.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416414|gb|EEX09673.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 212
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V++KA+ N R GP + + + + +G+P++VV EY NWR+++D DG GW++
Sbjct: 79 PIPRYVSMKAAEGNVRRGPSLTHRIDWVFKRRGMPLQVVAEYGNWRKVQDRDGAGGWVHY 138
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ +V + + PD + + A E GV+ + C+ +WC
Sbjct: 139 ALLSGVRTVLV--------ESDMLPVRTSPDPNAPVKAHFESGVVARLGSCTIDWCRISA 190
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P E+
Sbjct: 191 GGYGGWAPKSSLWGVDPNEI 210
>gi|84499903|ref|ZP_00998169.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
gi|84391837|gb|EAQ04105.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
Length = 173
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 84/140 (60%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V++KAS+ N R GP + + + ++ + +P+++ E+ +WR++ D +G GWI+
Sbjct: 40 PLPRYVSMKASKGNVRRGPSVTHRIDWVFMRRNMPLQITAEHGHWRRVVDQEGAGGWIHH 99
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+ ++ ++++ +P+ +S + A++E GV+ + +C+ +WC
Sbjct: 100 SLLSGVRTVLI--------QKDMLDIHLRPNRKSPVAAQLELGVVARLDQCTPDWCRLSV 151
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
+GW K +WG+ E+
Sbjct: 152 AGYKGWAPKSALWGVEAAEL 171
>gi|148284831|ref|YP_001248921.1| hypothetical protein OTBS_1538 [Orientia tsutsugamushi str.
Boryong]
gi|146740270|emb|CAM80628.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 165
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ S I++ I F + + ++ + +PRF++ K + N R GP I Y +
Sbjct: 2 MMKTSRIYSFIITFIIMVTVFINAALSDNKNTKIPRFISTKTNEINMRTGPNIKYPIKWI 61
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ K P+E+V +++ W +RD G GWI+ S+LS KR+ +++ +N I NLYK
Sbjct: 62 FTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVIN------SNKIQ-NLYK 114
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ +S I+A +EP V +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 115 SSNYESRIIAYLEPKVRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|310814772|ref|YP_003962736.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
gi|308753507|gb|ADO41436.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
Length = 234
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR+V+++++ N R GP V + GLPV++ EYE+WR+I D DG GW++
Sbjct: 101 PVPRYVSLRSNEVNVRRGPASSQRVDWVFHRAGLPVQITGEYEHWRRIIDRDGEGGWVHY 160
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ IV + + +P+ + ++A+ E GV+ + EC +WC
Sbjct: 161 ALLSGNRTVIV--------QAELLPVLAQPEANAPVIAQFENGVIADLDECRPDWCRIGA 212
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW+ K +WG+ P E+
Sbjct: 213 GGYRGWVMKSALWGVDPTEI 232
>gi|159045511|ref|YP_001534305.1| hypothetical protein Dshi_2971 [Dinoroseobacter shibae DFL 12]
gi|157913271|gb|ABV94704.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 204
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA+ N R GP + + + + + +P+E+ EY +WR++RD DG GW++
Sbjct: 54 PLPRFVSMKAAEGNVRRGPSLTHRIDWVFKHRNMPLEITGEYGHWRRVRDRDGAGGWMHY 113
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SLLSG R+ I+ + P+ +P+ + + A+ E GV+ + C WC
Sbjct: 114 SLLSGARTVIIE----EDLAPV----LSQPNEDAQVRARAELGVIARLEGCENAWCRVRV 165
Query: 173 LDTEGWIKKQKIWGI 187
T GW+++ ++WG+
Sbjct: 166 GRTRGWMQEAQLWGV 180
>gi|189183587|ref|YP_001937372.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
gi|189180358|dbj|BAG40138.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
Length = 165
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S I T+ I + ALS K +PRFV+ K + N R GP I Y + + K
Sbjct: 10 SFIITVIIMVTVFINAALSDNKNT----KIPRFVSTKTNEINMRTGPNIKYPIKWIFTKK 65
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
P+E+V +++ W +RD G GWI+ S+LS KR+ +++ +N I NLYK +
Sbjct: 66 DEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVIN------SNKIQ-NLYKSSNY 118
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+S I+A +EP + +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 119 ESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|114328778|ref|YP_745935.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
gi|114316952|gb|ABI63012.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
Length = 281
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRF ++A N R+GP Y + Y + LPVE+V+E++ WR ++D +G GW+++
Sbjct: 144 PIPRFAALRADEVNMRVGPDTRYPIEWVYKRRELPVEIVREFQVWRLVQDQEGVKGWVHQ 203
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFG 170
+ L+G+R+ + T + L ++ D +S VA ++PGV+ I+ C EWC
Sbjct: 204 ATLTGRRTFL-------TIGQTPVTLRRRADEESSAVAILKPGVVGRIQNCEAKSEWCQV 256
Query: 171 YNLDTEGWIKKQKIWGIYPGEV 192
G++++ +WG+ P EV
Sbjct: 257 QVKSYRGYLRRSTMWGLLPDEV 278
>gi|259416866|ref|ZP_05740786.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
gi|259348305|gb|EEW60082.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
Length = 201
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRFV++KA+ N R GP + + + + +G+P+EV EY +WR+++D DG GW++
Sbjct: 68 PLPRFVSMKAAEGNVRRGPSLNHRIDWVFKRRGMPLEVTAEYGHWRRVQDRDGQGGWVHY 127
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ ++ + + +P + +VA E GV+ + C WC
Sbjct: 128 ALLSGIRTVLIE--------EDMLQVRARPQEGAPVVAAFELGVVAQLGACDPSWCEVTA 179
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW +K+ +WG+ E+
Sbjct: 180 GGHTGWTRKENLWGVDADEL 199
>gi|262277750|ref|ZP_06055543.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
gi|262224853|gb|EEY75312.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
Length = 152
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++K ++ N R+GP Y V Y K LPV ++ E+ NWR+I+D++ +GWI+ S LS
Sbjct: 24 SLKNNKVNVRLGPSKTYPVKFIYKNKYLPVLIIDEHYNWRKIKDYENDLGWIHISQLSRT 83
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
RS + + NN + ++ P I S AK+E +L I EC+ WC N GW
Sbjct: 84 RSTVTTK-----NNQV---IFSSPTIFSKPKAKLEIYQVLIISECTKNWCKVKNSKINGW 135
Query: 179 IKKQKIWGIYPGEVFK 194
IKK +WGI E+ K
Sbjct: 136 IKKNHLWGIQKDEIIK 151
>gi|296114191|ref|ZP_06832846.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295979267|gb|EFG85990.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 356
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S +K PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR +
Sbjct: 166 MSPDKGSATGLPLPRFAAFRADEVNLRAGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVE 225
Query: 102 DFDGTIGWINKSLLSGKRSAIV-------------SPWNRKTN----------------- 131
D DG GW++++ L G R+ ++ P ++T+
Sbjct: 226 DADGQKGWVHQATLVGTRTFVIPGQPVQGDAQQAGQPSAKETDVIGRADSRIIGHVADAT 285
Query: 132 ----NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIW 185
P + L K D S IVA ++PGV+ T+R+C WC GW+++Q +W
Sbjct: 286 QAAAVPGGVMLRGKADPASPIVAVLKPGVVGTLRQCPAGSGWCQVTVKQYSGWLERQSLW 345
Query: 186 GIYPGEVF 193
G+ P EV
Sbjct: 346 GLLPQEVI 353
>gi|126734884|ref|ZP_01750630.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
gi|126715439|gb|EBA12304.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
Length = 176
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+V+++AS AN R GP + + + + + +P++V+ EY +WR++ D DG GW++
Sbjct: 43 PLPRYVSLRASEANVRRGPSLSHRIDWVFQRQSMPLQVIAEYGHWRRVIDRDGQGGWVHY 102
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LSG R+ ++ N L +P+ ++ A +E GV+ + +C+ EWC
Sbjct: 103 RMLSGARTVVIEEPN--------TVLRTRPEPGALENAVLETGVVARLGDCNPEWCRLTA 154
Query: 173 LDTEGWIKKQKIWGIYPGEV 192
GW +K +WG+ E+
Sbjct: 155 GGYRGWARKAALWGVADAEI 174
>gi|42520974|ref|NP_966889.1| hypothetical protein WD1176 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58699599|ref|ZP_00374297.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|42410715|gb|AAS14823.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58533884|gb|EAL58185.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 163
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LL
Sbjct: 40 NFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLL 99
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S KR AIV Y Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 100 SDKRYAIVKE-------DTY--GYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKR 150
Query: 176 EGWIKKQKIWGI 187
+ W++K+ I+G+
Sbjct: 151 KAWVQKKHIYGV 162
>gi|225630845|ref|YP_002727636.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
gi|225677456|ref|ZP_03788419.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590502|gb|EEH11766.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225592826|gb|ACN95845.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
Length = 162
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LL
Sbjct: 39 NFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLL 98
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S KR AIV Y Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 99 SDKRYAIVKE-------DTY--GYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKR 149
Query: 176 EGWIKKQKIWGI 187
+ W++K+ I+G+
Sbjct: 150 KAWVQKKHIYGV 161
>gi|114770151|ref|ZP_01447689.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
gi|114548988|gb|EAU51871.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
Length = 165
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 30 LAIYFYLAPILAL-SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+AI L+ + A+ ++E+ P+PRFV++K + R GP ++ + Y + P+
Sbjct: 8 IAITIVLSWVSAVKANERGPVTNLPIPRFVSMKVNEGFVRRGPSKLHRIDWVYKHRNTPL 67
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ EYE+WR+++D DG GW++ LLSG R+ + + +P+ Y+ D I
Sbjct: 68 MITGEYEHWRRVQDVDGQGGWMHFRLLSGTRTVVF----KSAKSPVKRRNYEGAD----I 119
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
V E GV+ + EC+ WC + +GW+ K IWG++ E+
Sbjct: 120 VFFAEKGVIGNLDECNLSWCKVFVNKKKGWVSKSHIWGVFENEL 163
>gi|84515929|ref|ZP_01003290.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
gi|84510371|gb|EAQ06827.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
Length = 212
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRFV++ A+ AN R GP + + + + + +P+++V EY WR++ D DG GWI+
Sbjct: 79 PVPRFVSLNAAEANVRRGPSLSHRIDWVFKRRNMPLQLVAEYGQWRRVIDHDGQGGWIHY 138
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+LLSG R+ +V+ +T P L PD + A +E GV+ + +C +WC
Sbjct: 139 TLLSGARTVLVT----ETPTP----LRTLPDPAAPENAILEQGVIGRLGQCEPDWCQLNA 190
Query: 173 LDTEGWIKKQKIWGI 187
GW+ K IWG+
Sbjct: 191 GGYRGWVPKSDIWGV 205
>gi|254450049|ref|ZP_05063486.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
gi|198264455|gb|EDY88725.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
Length = 181
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 8/171 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + L ++A + PI ++ ++ P+PR+V++KA+ AN R GP + + + +
Sbjct: 17 MSSPLAQSVAAQETVVPITSVQSDRGPVTNLPMPRYVSLKANEANVRRGPSLSHRIDWVF 76
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+ VV EY +WR++ D +G GW++ SLLSG R+ I+ + + L ++
Sbjct: 77 QRRDMPLRVVGEYGHWRRVVDREGMGGWVHYSLLSGNRTVII--------DRDLLVLRRQ 128
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
S VA +E GV+ + EC +WC GW K ++G+ E+
Sbjct: 129 AIAASTEVAILELGVIADLGECQIDWCRLRADGYRGWAPKADLFGVGADEL 179
>gi|332186855|ref|ZP_08388597.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
gi|332013188|gb|EGI55251.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
Length = 162
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
EK+ +P + +I AS A R GP Y TY LPV+VV ++ WR+++D DGT GW
Sbjct: 25 EKRAMPYYGSIGASLARMRTGPARAYPASWTYRRPDLPVKVVAAFKEWRKVQDPDGTEGW 84
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ LL R+AIV +++ P+ + D +++ + PGV+ I EC+G WC
Sbjct: 85 MLAVLLRNTRTAIV-----RSSEPLPMRSAPSDDAKTLW--RAAPGVVGRISECNGGWCR 137
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVF 193
G++ IWG+ PGE
Sbjct: 138 LDVKGQAGFVPVGAIWGVEPGETL 161
>gi|254419849|ref|ZP_05033573.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186026|gb|EDX81002.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 190
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR++++K+S +R GPG+ Y ++ Y GLPV+VV E WR+I D DG + WI+++
Sbjct: 47 VPRWISLKSSHVRARQGPGLDYPILWEYRAAGLPVQVVAETTEWRKICDPDGAVAWIHRT 106
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ SG+RS +P + ++ S + A++ P L+++ EC WC
Sbjct: 107 VSSGRRSVF-------NTSPEEVMIHAGKSQASAVRARLSPRSLVSLDECEDGWCQVRAR 159
Query: 174 DTEGWIKKQKIWG 186
GW++++ ++G
Sbjct: 160 RLRGWVQERAVFG 172
>gi|148557478|ref|YP_001265060.1| hypothetical protein Swit_4584 [Sphingomonas wittichii RW1]
gi|148502668|gb|ABQ70922.1| protein of unknown function DUF1058 [Sphingomonas wittichii RW1]
Length = 160
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ L L ++ E E++ +P + +I A R GP Y Y + LPV+VV+
Sbjct: 8 WTLLGALLIAGAGEAQERR-VPYWASIATGDALLRTGPERTYPATWRYRRRDLPVQVVQV 66
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
Y NWR+IR+ DGT GW+ +LLS R+A+V+ + P ++ P S + + E
Sbjct: 67 YGNWRRIREQDGTEGWMLATLLSATRTAVVT-----GDAP--AEMHADPSSGSGLNWRAE 119
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
PGV+ I +C +WC G+I+ + I+G+ PGEV +
Sbjct: 120 PGVVGRISKCESDWCLFDVGGKRGYIQIEHIYGVDPGEVVE 160
>gi|197103496|ref|YP_002128873.1| hypothetical protein PHZ_c0030 [Phenylobacterium zucineum HLK1]
gi|196476916|gb|ACG76444.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 172
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PR++++K + N+R GPG + ++ Y +GLPV+VV E WR+I D +G + W+++
Sbjct: 38 PVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETSEWRRICDPEGGLAWVHR 97
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ G+RS + P L +KP + VA + P + ++ C WC
Sbjct: 98 RVTDGRRSVM-------NLQPAAAPLLRKPKAGAETVAYLRPKAMASLVRCQKGWCKVKA 150
Query: 173 LDTEGWIKKQKIWG 186
GW+++ +WG
Sbjct: 151 DRATGWVREGALWG 164
>gi|329891074|ref|ZP_08269417.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846375|gb|EGF95939.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
Length = 168
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+VT+K+S+ +R GPG+ Y ++ Y GLPV+V+ E WR+I D DG++ WI+++
Sbjct: 24 VPRWVTLKSSQVRARQGPGLDYRILWEYRAAGLPVQVIAETREWRKICDPDGSVAWIHRT 83
Query: 114 LLSGKRSAIVSPWNRKTNN-PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ SG+RS NR PI + +++++ P L+ + EC WC
Sbjct: 84 VASGRRSVF----NRSDEAVPIRSGRSETASVRALL----SPRALVPLDECEDGWCRVRA 135
Query: 173 LDTEGWIKKQKIWG 186
GW+ ++ ++G
Sbjct: 136 RKLRGWVAERAVFG 149
>gi|148261161|ref|YP_001235288.1| hypothetical protein Acry_2170 [Acidiphilium cryptum JF-5]
gi|326404565|ref|YP_004284647.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
gi|146402842|gb|ABQ31369.1| protein of unknown function DUF1058 [Acidiphilium cryptum JF-5]
gi|325051427|dbj|BAJ81765.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
Length = 177
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+PRF + ++ R GPG Y ++ Y LPVEV E+ WR + DG GW+++
Sbjct: 42 PVPRFESFRSREIYMRAGPGFQYPIIWVYHRLDLPVEVTGEFNVWRHVVAPDGGDGWVHE 101
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
+LL G RS IV R T L P + VA ++ GV+ IR C WC
Sbjct: 102 ALLHGLRSFIVIG-GRHT-------LRAGPHKDAAPVAYLDKGVIGVIRRCKAGAAWCQV 153
Query: 171 YNLDTEGWIKKQKIWGIYPGEVFK 194
GW+++ + WG + GE K
Sbjct: 154 EVDHRAGWLRRDQFWGSFAGEAIK 177
>gi|58699523|ref|ZP_00374245.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58533960|gb|EAL58237.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 148
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LL
Sbjct: 40 NFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLL 99
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S KR AIV Y Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 100 SDKRYAIVKE-------DTY--GYQKQSVDSKITMKIDKFVVMKIEKCNEEWCF 144
>gi|58699352|ref|ZP_00374124.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534130|gb|EAL58357.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 145
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LL
Sbjct: 40 NFVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLL 99
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S KR AIV Y Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 100 SDKRYAIVKE-------DTY--GYQKQSVDSKITMKIDKFVVMKIEKCNEEWCF 144
>gi|99036078|ref|ZP_01315112.1| hypothetical protein Wendoof_01000031 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 113
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 2 RTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIV---- 57
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
Y Y+K + S I K++ V++ I +C+ EWCF + W++K+ I+G+
Sbjct: 58 ---KEDTY--GYQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYGV 112
>gi|330991432|ref|ZP_08315383.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
gi|329761451|gb|EGG77944.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
Length = 298
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 36/177 (20%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR + D DG GW+++
Sbjct: 119 PLPRFAAFRADEVNLRTGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVEDSDGQKGWVHQ 178
Query: 113 SLLSGKRSAIV---SPWN--RKTNNPI-----------------------------YINL 138
+ L G R+ ++ P ++ + P + L
Sbjct: 179 ATLVGTRTFVIPGLPPQGDAQQADQPSAKETDVIGRADTRIVGHVADVAEAAGVKGAVML 238
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
S VA + PGV+ TIR+C+ WC GW+++ +WG+ P EV
Sbjct: 239 RADAATTSAPVAVLRPGVVGTIRQCAAGTPWCKVSVKQYSGWLERSAMWGLLPQEVI 295
>gi|149184645|ref|ZP_01862963.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
gi|148831965|gb|EDL50398.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
Length = 155
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ + +P + +++A+ N R+GP Y + Y KGLPV+VV+ E WR I D DGT GW
Sbjct: 22 QDREVPYWASLRANEINMRVGPSADYKIDWVYRRKGLPVKVVRVMEGWRLIEDPDGTRGW 81
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ LL R A+V K P + + D + I ++ PGV+ T+ +C+ WC
Sbjct: 82 VASRLLDPARGAMVIG---KDAAP----MREDADASAPIKWQLAPGVVGTLGDCARGWCE 134
Query: 170 GYNLDTEGWIKKQKIWG 186
GW+++ ++WG
Sbjct: 135 MSVGKRSGWVRQTQLWG 151
>gi|16127951|ref|NP_422515.1| hypothetical protein CC_3721 [Caulobacter crescentus CB15]
gi|221236773|ref|YP_002519210.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
gi|13425491|gb|AAK25683.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965946|gb|ACL97302.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
Length = 181
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K + N+R GP + ++ Y KGLPV+VV E WR+I D +G + W++K
Sbjct: 46 VPRYVSLKYAEVNARNGPDEAHQLLWVYHAKGLPVQVVAETREWRRICDPEGGLAWVHKR 105
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G+RSA+ P + L P + + A ++ + ++ +C WC
Sbjct: 106 TTDGRRSAM-------RVQPTNLALLSAPKDGAKVNAYLKARAVASLDKCENGWCRLRAD 158
Query: 174 DTEGWIKKQKIWGIYP 189
+ GW ++ +IWG P
Sbjct: 159 GSSGWAREGEIWGADP 174
>gi|295691506|ref|YP_003595199.1| hypothetical protein Cseg_4171 [Caulobacter segnis ATCC 21756]
gi|295433409|gb|ADG12581.1| protein of unknown function DUF1058 [Caulobacter segnis ATCC 21756]
Length = 178
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K + N+R GP + ++ Y KGLPV+VV E WR+I D +G + W+++
Sbjct: 43 VPRYVSLKYAEVNARKGPDEAHQLLWVYRAKGLPVQVVAETREWRRICDPEGGLAWVHRR 102
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ G+RSA+ P + L P + I A ++ + + +C WC
Sbjct: 103 TVDGRRSAM-------RVQPTNLPLLSAPKDGAKINAYLKSRSVAALDKCEDGWCRLRAD 155
Query: 174 DTEGWIKKQKIWGIYP 189
GW ++++IWG P
Sbjct: 156 GASGWAREREIWGADP 171
>gi|315497812|ref|YP_004086616.1| hypothetical protein Astex_0780 [Asticcacaulis excentricus CB 48]
gi|315415824|gb|ADU12465.1| protein of unknown function DUF1058 [Asticcacaulis excentricus CB
48]
Length = 222
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 41 ALSHEKEIF---EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
A S E+E F K+P+PR+ +++++ +R GP V+ TY K LPV+++ E W
Sbjct: 58 AGSAEEESFNTPSKQPVPRWASLRSNEVYARSGPTKENKVLWTYRQKNLPVQIISETREW 117
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R I D DG I W+++S+L +RS +VS +K I+L + + A++ P L
Sbjct: 118 RMICDPDGGIAWVSRSMLKSQRS-VVSMGTQK------IDLLSAAKPTAKVKARLNPRSL 170
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ +C +C + +GW + ++WG G K
Sbjct: 171 AALDKCRKGYCKVSVGNVDGWAPQDRLWGAQEGAACK 207
>gi|58040675|ref|YP_192639.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
gi|58003089|gb|AAW61983.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
Length = 311
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 36/178 (20%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+ ++A + R GPG Y + Y +GLPVE+ +E++ WR + D DG GW+++
Sbjct: 132 PLPRYAALRADKVYMRRGPGDRYPIDWVYHRRGLPVEIEREFDVWRLVEDSDGQKGWVHQ 191
Query: 113 SLLSGKRS----------------------------------AIVSPWNRKTNNPIYINL 138
+ L G R+ A V+ + + + L
Sbjct: 192 ATLYGSRTFVIPGLPPEGVKAQNGEASAQEGDHIGKADARILARVATQDEARAHKNDVLL 251
Query: 139 YKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
P+ S ++A ++ G + I+ C + +WC EGW+ ++ WG+ PGE +
Sbjct: 252 MSHPEEDSTVIAVLQQGTVGNIKLCPQNSQWCRVSVKGYEGWLPRRLFWGLLPGETIQ 309
>gi|296283826|ref|ZP_06861824.1| hypothetical protein CbatJ_09396 [Citromicrobium bathyomarinum
JL354]
Length = 160
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F LA L I L+ + P + TI + AN R+GP Y + Y KGLP
Sbjct: 6 FLLATGLALT-IATLTATPAGGANRGTPYWATIDVTEANMRVGPSAEYRIEWVYKRKGLP 64
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V+VV+ E WR + D DG GWI LLS R AIV ++ S
Sbjct: 65 VKVVRVREGWRLVEDPDGDQGWIAARLLSRTRGAIVV-------GKGLAEMHDSDAAGSA 117
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
I K+EPGV+ + +C WC + G+++ ++WG
Sbjct: 118 IKWKLEPGVVGRLGDCEENWCEFSVGERSGFVEANRLWG 156
>gi|304320326|ref|YP_003853969.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
gi|303299228|gb|ADM08827.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
Length = 179
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWI 110
P+PRFV ++ R +R GP Y V + KGLP++V+ E + WR++ D DG WI
Sbjct: 49 PIPRFVGLRKDRVRARFGPSFDYPVSYEFSMKGLPLKVIGEDRDNIWRRVEDRDGQRMWI 108
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++S+LS A+V P I L P + A++ GV L + C WC
Sbjct: 109 HRSMLSANSHAVV-------QAPEAI-LRTGPGATNAARARLANGVFLKLETCEAGWCRV 160
Query: 171 YNLDTEGWIKKQKIWG 186
+ + GW+ +WG
Sbjct: 161 HAGEYRGWLPATSLWG 176
>gi|302381693|ref|YP_003817516.1| hypothetical protein Bresu_0578 [Brevundimonas subvibrioides ATCC
15264]
gi|302192321|gb|ADK99892.1| protein of unknown function DUF1058 [Brevundimonas subvibrioides
ATCC 15264]
Length = 170
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K+S +R GPG+ Y ++ Y GLPV+V+ E WR+I D + + WIN+S
Sbjct: 26 VPRWVSLKSSHVRARQGPGLDYRILWEYRAAGLPVQVIAETREWRKICDPELGVAWINRS 85
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
++SG+R + + ++ + QS + A+ ++ + +C WC
Sbjct: 86 VVSGRRGVF-------NDTGAEVAVHAARNAQSPVRARFSAHSIVALDDCKDGWCRVRAR 138
Query: 174 DTEGWIKKQKIWGIYP 189
+GW+ + ++G P
Sbjct: 139 KLKGWLPEGAVFGTQP 154
>gi|330813307|ref|YP_004357546.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486402|gb|AEA80807.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 156
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E F L +++++K ++ N RI P + Y K PV ++ +Y NWR+I+DF+
Sbjct: 18 ETFSDSDL-KYLSLKNNKVNVRIAPSRTAPIKWIYEKKSFPVIIIDQYYNWRKIKDFEND 76
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ S LS KRS + + + I +KKP S + K+ + I+ECS
Sbjct: 77 SGWVHISQLSRKRSVLF------VKDEVLI--FKKPTTYSRPIYKIGKLEVAVIKECSLN 128
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVF 193
WC N GW++K +WG+ E+
Sbjct: 129 WCNVKNNLFSGWVEKNSLWGLNKNEIM 155
>gi|114797532|ref|YP_762107.1| hypothetical protein HNE_3434 [Hyphomonas neptunium ATCC 15444]
gi|114737706|gb|ABI75831.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
F KKP+PRF T++ + N R GP + + Y KGLPV VVKE W ++RD G
Sbjct: 47 FSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYNRKGLPVMVVKESGEWYRVRDPAGDEV 106
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
WI+ +L+ +A+V T + L PD VA++ GVL+ + C C
Sbjct: 107 WIHMRMLAEGTTAMV------TRTAV---LASSPDRSGEGVAELGKGVLVEVTACEAALC 157
Query: 169 FGYNLDTEGWIKKQKIWGIYPGEVFK 194
GW+ + +WG G K
Sbjct: 158 EVEAAGYRGWMPRASLWGASTGPAGK 183
>gi|258541712|ref|YP_003187145.1| hypothetical protein APA01_06150 [Acetobacter pasteurianus IFO
3283-01]
gi|256632790|dbj|BAH98765.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635847|dbj|BAI01816.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638902|dbj|BAI04864.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641956|dbj|BAI07911.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645011|dbj|BAI10959.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648066|dbj|BAI14007.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651119|dbj|BAI17053.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654110|dbj|BAI20037.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 338
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+ ++A N R GPG + ++ Y +G+PV + +E++ WR + D G GW+ +
Sbjct: 157 PLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPVRIEREFDVWRLVEDPTGQKGWMQQ 216
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKK---------------------PDIQSI---- 147
+ L+G R +V + PI L K D +SI
Sbjct: 217 ATLAGGRDFLVPGEPPGDDAPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDAKSIAGAV 276
Query: 148 -----------IVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+VA ++PG + +++EC+ WC GW+ ++ IWG+ E
Sbjct: 277 MLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGVDADEA 334
>gi|87200321|ref|YP_497578.1| hypothetical protein Saro_2307 [Novosphingobium aromaticivorans DSM
12444]
gi|87136002|gb|ABD26744.1| protein of unknown function DUF1058 [Novosphingobium
aromaticivorans DSM 12444]
Length = 173
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+P +V+ +AN R+GPG Y + TY+ KG+P++V++ WR + D DG GWI
Sbjct: 45 VPYWVSTSKDKANMRVGPGRDYRISWTYVRKGVPLKVLRVMGGWRLVEDPDGARGWILAQ 104
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LS +R+ IV L +K D ++ +V PGV+ +++C WC
Sbjct: 105 FLSRERAGIV--------KGGVTGLREKKDGSGRLLWRVAPGVIGKVKDCDDGWCAFDVG 156
Query: 174 DTEGWIKKQKIWG 186
+G+++ +WG
Sbjct: 157 GRKGYVRASSVWG 169
>gi|329115262|ref|ZP_08244017.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
gi|326695705|gb|EGE47391.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
Length = 383
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLPR+ ++A N R GPG + ++ Y +G+P+ + +E++ WR + D G GW+ +
Sbjct: 202 PLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPMRIEREFDVWRLVEDPTGQKGWMQQ 261
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKK---------------------PDIQSI---- 147
+ L+G R +V + PI L K D +SI
Sbjct: 262 ATLAGGRDFLVPGEPPGDDTPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDTKSIAGAV 321
Query: 148 -----------IVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+VA ++PG + +++EC+ WC GW+ ++ IWG+ E
Sbjct: 322 MLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGVDADEA 379
>gi|103486271|ref|YP_615832.1| hypothetical protein Sala_0779 [Sphingopyxis alaskensis RB2256]
gi|98976348|gb|ABF52499.1| protein of unknown function DUF1058 [Sphingopyxis alaskensis
RB2256]
Length = 113
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GP I V+ Y K LPV+V+ +ENWR++ D DG GW+ LLS R+AIV+
Sbjct: 2 RKGPSIDVPVLWEYRRKDLPVKVIARHENWRRVEDPDGARGWMAARLLSRTRTAIVTGAI 61
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
R + ++P + + + PGV+ I +C WC +GWI+ IWG
Sbjct: 62 RP--------MREEPSTTAAVAYRAAPGVVGRITDCQNGWCRFDVKGRKGWIQTDHIWG 112
>gi|71083107|ref|YP_265826.1| hypothetical protein SAR11_0402 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062220|gb|AAZ21223.1| Conserved hypothetical protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 149
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 26 LIFTLAIYFYLAPIL----ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+I +AI+F +L +++ EK F+++K S+ N R GP + Y
Sbjct: 1 MIKKIAIWFLCLSVLFGQFSMAEEK----------FLSLKKSKVNVRYGPSFDSKIKYIY 50
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
LP++ + + EN+R+I D GWI+ S + S I+ + I LYKK
Sbjct: 51 KKINLPIKQIDQKENFRRIVDLKNNSGWIHISQIKKSNSIII------LEDKI---LYKK 101
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P S +AK+E G LL +++C WC D GWIK + IWG
Sbjct: 102 PSNFSKPIAKLEKGRLLILKKCENIWCNVKTEDYSGWIKTENIWG 146
>gi|91762467|ref|ZP_01264432.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718269|gb|EAS84919.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 149
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 26 LIFTLAIYFYLAPIL----ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+I +AI+F +L +++ EK F+++K S+ N R GP + Y
Sbjct: 1 MIKKIAIWFLCLSVLFGQFSMAEEK----------FLSLKKSKVNVRYGPSFDSKIKYIY 50
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
LP++ + + EN+R+I D GWI+ S + S I+ + I LYKK
Sbjct: 51 KKINLPIKQIDQKENFRRIVDLKNNSGWIHISQIKKSNSIII------LEDKI---LYKK 101
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P S +AK+E G LL +++C WC D GW+K + IWG
Sbjct: 102 PSNFSKPIAKLEKGRLLILKKCENIWCNVKTEDYSGWVKTENIWG 146
>gi|94498704|ref|ZP_01305255.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
gi|94421867|gb|EAT06917.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
Length = 152
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A+ + +LA S KK P + ++ A R+GP + Y Y + LPV+
Sbjct: 1 MAVGGAVLLVLAASSANAAPGKK-TPYWASLSHDEARMRVGPSLDYPSNWVYRRRDLPVK 59
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
VV+ WR+++D DG GW++ LLS +AIV R P L+ P S +
Sbjct: 60 VVQVLGLWRKVQDPDGAQGWMHVRLLSDTPTAIV----RSAIAP----LHGSPSDGSATL 111
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+ E GV+ I +CSG WC G++K IWG G
Sbjct: 112 FRAERGVVGRISDCSGGWCAFDVKGRRGYVKASDIWGAIDG 152
>gi|167649014|ref|YP_001686677.1| hypothetical protein Caul_5059 [Caulobacter sp. K31]
gi|167351444|gb|ABZ74179.1| protein of unknown function DUF1058 [Caulobacter sp. K31]
Length = 182
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K N+R+GP + ++ Y KGLPV+VV E WR+I D +G + W++K
Sbjct: 48 VPRYVSLKYGEVNARVGPDEEHRLLWIYKAKGLPVQVVAETREWRRICDPEGGLSWVHKR 107
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ G+R+A+ + L +P + I A + + C WC
Sbjct: 108 TIDGRRTAM-------RVQAAALPLRAQPKANARITAYLAGRATAGLDRCEKGWCRLKAD 160
Query: 174 DTEGWIKKQKIWG 186
GW + +IWG
Sbjct: 161 GESGWAPESEIWG 173
>gi|85708759|ref|ZP_01039825.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
gi|85690293|gb|EAQ30296.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
Length = 166
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 31 AIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
A+ F+ L L IF + + +P + T++ N R+GP Y + Y K
Sbjct: 3 ALRFFAVLGLCLVLASAIFTDALRAQNREVPYWATLRFDEVNMRVGPSQEYKIDWVYKRK 62
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GLPV+VV+ E+WR ++D +GT GW+ S L+ K ++ L ++P
Sbjct: 63 GLPVKVVRVRESWRLVQDHEGTQGWVAASQLNPKLGVLII-------GEGLTELREEPAA 115
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE---GWIKKQKIWGI 187
S++ EPGV+ + EC +C +D + GW+ ++WG+
Sbjct: 116 NSVMRWLAEPGVVGELIECRDNFC---EIDVDGRVGWVAMDRLWGV 158
>gi|85374170|ref|YP_458232.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
gi|84787253|gb|ABC63435.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
Length = 156
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI L +LA +++ +P + +I + N R+GP Y + + +GLPV+V
Sbjct: 5 AILIPLCLVLAACGSAAA-QQREVPYWASINTTELNMRVGPSTEYRIQWVFKREGLPVKV 63
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
++ + WR I D G GW+ +LS +R +V+ + P S +
Sbjct: 64 LRLKDGWRYIEDPVGDQGWVAARMLSTERGGVVT-------GEGLAPMRAAPADNSSLKW 116
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+EPGV+ T+ +C WC EG++ + ++WG
Sbjct: 117 NLEPGVVGTLGDCEAGWCVFSVEGREGYVPEARLWG 152
>gi|329847681|ref|ZP_08262709.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
gi|328842744|gb|EGF92313.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
Length = 196
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
E + K +PR+ + + N+R GP + V TY G+PV+++ E +WR I D
Sbjct: 47 EYDTPSKAVVPRWAMLGKNEVNARNGPSLDNRKVWTYRKAGVPVQIISETRDWRLICDPA 106
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + W+ KS+L R+ +++P + + + P + + A V P + TI C
Sbjct: 107 GGVAWVKKSMLRSPRN-VITPTQK-------LEIRTDPKADADVRAIVRPRSIATIETCK 158
Query: 165 GEWCFGYNLDTEGWIKKQKIWG 186
+WC GW K +WG
Sbjct: 159 DDWCKISVAGQTGWAPKTVLWG 180
>gi|209544146|ref|YP_002276375.1| hypothetical protein Gdia_2000 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531823|gb|ACI51760.1| protein of unknown function DUF1058 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 367
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 58/222 (26%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI P A + +K PLPRF ++A N R GPG Y + Y + LPV++
Sbjct: 145 AIPSPPGPADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKI 204
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV--------------------------- 123
+E++ WR + D DG GW++++ L G R+ +V
Sbjct: 205 EREFDVWRLVEDSDGQKGWVHQATLVGARTFVVPGLPPVDPASDAAAQGASAQGAPARSG 264
Query: 124 -SPWNRKTNNP------------IYINLYKKPDIQSIIVAKV----------------EP 154
+P K P + P + I V +P
Sbjct: 265 TAPAGGKPAAPTPQPGPGGHFDTTVVGHLADPAAAATIPGAVILRAAADAASAVVAVLKP 324
Query: 155 GVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
G + T R C+ WC GW+ + +WG+ P E +
Sbjct: 325 GSVGTFRTCAAGTTWCRVSVQHYSGWLDRSSVWGLLPQETIQ 366
>gi|162147086|ref|YP_001601547.1| hypothetical protein GDI_1291 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785663|emb|CAP55234.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 300
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI P A + +K PLPRF ++A N R GPG Y + Y + LPV++
Sbjct: 78 AIPSPPGPADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKI 137
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+E++ WR + D DG GW++++ L G R+ +V
Sbjct: 138 EREFDVWRLVEDSDGQKGWVHQATLVGARTFVV 170
>gi|254469002|ref|ZP_05082408.1| conserved hypothetical protein [beta proteobacterium KB13]
gi|207087812|gb|EDZ65095.1| conserved hypothetical protein [beta proteobacterium KB13]
Length = 150
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F+++ A +A P T +TKG P+EV+ + W++++D +G I WI S LS
Sbjct: 24 FMSVNADQAFLHEAPS-GSTKKSFIVTKGYPLEVIVSLKEWKKVKDHEGLINWIKTSDLS 82
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNL- 173
KR+ + N K +NPIY+ +P S I+AKV V L + + +W Y+
Sbjct: 83 SKRTVL----NLKGDNPIYL----EPSSASPILAKVNENVTLELLDAKKIDDWVKVYSKV 134
Query: 174 -DTEGWIKKQKIWGI 187
D EG+IK +WGI
Sbjct: 135 GDIEGFIKATDLWGI 149
>gi|320352151|ref|YP_004193490.1| hypothetical protein Despr_0005 [Desulfobulbus propionicus DSM
2032]
gi|320120653|gb|ADW16199.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+I N R GPG + V+ ++ G P+EV+ +W Q++DF+G+ GW++K
Sbjct: 26 MVSIAGEEINMRSGPGTEHEVLW-KISDGFPLEVLATKGDWLQVQDFEGSSGWVHKKTTR 84
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
IV NR T IN+ ++P ++ +VA GV+ E G W +
Sbjct: 85 ATPHMIVKA-NRGTAQ--QINVRREPSTKAAVVATASYGVVFKTLERQGTWVKVEHGQGV 141
Query: 176 EGWIKKQKIWG 186
GW++ +WG
Sbjct: 142 TGWVEGSLLWG 152
>gi|326387467|ref|ZP_08209076.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208123|gb|EGD58931.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
Length = 165
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEK-EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
L+ +L L + +++L E P +V+++ S N R+GPG Y +
Sbjct: 3 LRAALAACLTVLAATGAVVSLRPAPVHAAEDGGAPYWVSLRNSLTNMRVGPGRDYRINWV 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY----I 136
Y+ G+P++V+++ E W + D +G GW+ ++ RK + I
Sbjct: 63 YVRAGVPLKVLRQMEGWVLVEDSEGARGWMLTQFVA-----------RKAHTGIVKGGIA 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIWG 186
+ + D ++ + PGV+ I +CS WC ++D +G++++ +WG
Sbjct: 112 EIRENKDGSGALLWRAAPGVIARIGDCSAGWCK-VDIDGRQGYVRQDAVWG 161
>gi|218514510|ref|ZP_03511350.1| hypothetical protein Retl8_12802 [Rhizobium etli 8C-3]
Length = 45
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 1 AKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 45
>gi|294012311|ref|YP_003545771.1| hypothetical protein SJA_C1-23250 [Sphingobium japonicum UT26S]
gi|292675641|dbj|BAI97159.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 156
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
KP+P + ++ A R+GP + Y Y + LPV+VV+ WR++ D GT GW++
Sbjct: 27 KPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVVQVLGLWRKVEDPSGTQGWMH 86
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
LLS +AIV+ + P + + + GV+ + C WC
Sbjct: 87 VRLLSDTPTAIVT--------ADIAPMRDSPSEDGRALFRAQKGVVGRLSSCGKGWCAFD 138
Query: 172 NLDTEGWIKKQKIWG 186
+G+++ IWG
Sbjct: 139 VGGQKGFVRASDIWG 153
>gi|307293235|ref|ZP_07573081.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
gi|306881301|gb|EFN12517.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
Length = 154
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
KP+P + ++ A R+GP + Y Y + LPV+VV+ WR++ D GT GW++
Sbjct: 25 KPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVVQVLGLWRKVEDSSGTQGWMH 84
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
LLS +AIV+ + P + + + + GV+ + C WC
Sbjct: 85 VRLLSDTPTAIVT--------ADIAPMRDSPSEDARPLFRAQKGVVGRLGSCGKGWCAFD 136
Query: 172 NLDTEGWIKKQKIWG 186
+G+++ IWG
Sbjct: 137 VGGRKGFVRAGDIWG 151
>gi|297616461|ref|YP_003701620.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
gi|297144298|gb|ADI01055.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
Length = 634
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI S N R GPG YT V +TKG VEV+K+ +W QIR GW++ SL+S K
Sbjct: 37 TITGSVVNIRSGPGTNYTKVGA-ITKGAQVEVIKQAGDWCQIRFAGNKTGWVSSSLISVK 95
Query: 119 RSAIVSP----------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ P +NL + P +V KV G +LT+ +
Sbjct: 96 ATSQSQPVVSTTSSSTVSATGSGTTTVEVTGTTVNLRQGPGTSYKVVGKVSKGTVLTVVD 155
Query: 163 CSGEW 167
SG+W
Sbjct: 156 KSGDW 160
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y+ V L KG V+V+K +W ++ G GW+ L+ S
Sbjct: 213 NLRSGPGTSYSKV-GQLVKGDTVQVLKSSSDWYLVKTESGAQGWVAGWLVQVVTSGSTPN 271
Query: 126 WNRKTN 131
N+ TN
Sbjct: 272 MNQNTN 277
>gi|158520363|ref|YP_001528233.1| hypothetical protein Dole_0346 [Desulfococcus oleovorans Hxd3]
gi|158509189|gb|ABW66156.1| protein of unknown function DUF1058 [Desulfococcus oleovorans Hxd3]
Length = 149
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + I AL F ++ L ++ A+ AN R GPG Y K PV VV++
Sbjct: 10 FCMVFICALLVAAPAFSQERL----SVTATTANIRTGPGTSYDKAWQ-AEKNYPVVVVEK 64
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ W + +D++G GWI +L+S + IV +KT +N+ P +V + E
Sbjct: 65 KDGWVKFKDYEGDEGWIYGALVSATSTVIV----KKTR----VNVRSGPGTNHPVVFEAE 116
Query: 154 PGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIW 185
GV + + G+W + D + GWI + +W
Sbjct: 117 KGVPFEVIKNDGDWLQIKHADGDTGWIYRPLVW 149
>gi|264679109|ref|YP_003279016.1| SH3, type 3 [Comamonas testosteroni CNB-2]
gi|262209622|gb|ACY33720.1| SH3, type 3 [Comamonas testosteroni CNB-2]
Length = 157
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+SLI A+ L P LA + E FV+IK + N R P + L+
Sbjct: 13 SSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQPNTRSATLW-ELS 60
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
KG P++V + W +++D++ T+GW++ L S +V+ NL P
Sbjct: 61 KGYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHMVVT--------ARTANLRSGPG 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIWG 186
+ V K+E +L + G W + + GW+ K +WG
Sbjct: 113 QKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|218779807|ref|YP_002431125.1| hypothetical protein Dalk_1961 [Desulfatibacillum alkenivorans
AK-01]
gi|218761191|gb|ACL03657.1| protein of unknown function DUF1058 [Desulfatibacillum alkenivorans
AK-01]
Length = 143
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ TLA+ F L P LA F K+ +++ +AN R GPG Y ++ + +
Sbjct: 4 IVCTLAVLFLLMPGLA-------FAKR-----MSVAVDKANIRSGPGTNYDII-FRVERY 50
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
PV V +W + D DG GW++K+LL +S I + N+ P
Sbjct: 51 FPVLVEDCVNDWCRFTDVDGQAGWLHKNLLDDVKSVITT--------KDKCNVRSGPGTN 102
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKIW 185
+ VA VE GV + G W ++ GWI +W
Sbjct: 103 NKKVAIVEAGVPFKVLTTKGRWIKVEHVSGVVGWIHASLVW 143
>gi|297570264|ref|YP_003691608.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296926179|gb|ADH86989.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 151
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L+++F + +L L + E V++ + N R GPG ++++ L KG P+
Sbjct: 7 ALSLFFAVLFLLGLVTAAQAIE------MVSVDRPKINMRSGPGTNHSILWE-LGKGYPL 59
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
V+ NW ++RDF+G GW+ + L+ +V P+ N+ P + +
Sbjct: 60 MVIGRQGNWMKVRDFEGDEGWVYQPLVGRTPHLVVKV-------PV-ANIRSGPGTRYRL 111
Query: 149 VAKVEPGVLLTIRECSGEWC-FGYNLDTEGWIKKQKIWG 186
V + GV+L E W + GW+ + +WG
Sbjct: 112 VGQARYGVVLQTMERGSGWVKVRHENGLTGWMSRDLLWG 150
>gi|74318421|ref|YP_316161.1| hypothetical protein Tbd_2403 [Thiobacillus denitrificans ATCC
25259]
gi|74057916|gb|AAZ98356.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 156
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 64 RANSRIGPGIMYTVVCTYLTK------GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
R SR P ++YT K GLP+EVV + ENW ++RD G + WI K+ L G
Sbjct: 34 RTTSR--PALLYTAPSNTAGKVAIAGSGLPLEVVVDTENWAKVRDHSGRLAWIEKAALGG 91
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLD 174
R+ +V +T+ + +PD + + +V GVLL + + G +
Sbjct: 92 SRNVVV---KAETS---LVRTQPRPDAE--VAFRVARGVLLGVTGEPDAYGWLPVKHADG 143
Query: 175 TEGWIKKQKIWG 186
GW+ ++WG
Sbjct: 144 MAGWLPLHEVWG 155
>gi|323490012|ref|ZP_08095233.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
gi|323396308|gb|EGA89133.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
Length = 525
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S I +A F P+L +H +F V I + N R GPG+ Y+V L +
Sbjct: 11 SFILFIAASF---PLLDKNH---VFADTGT---VEITGTTVNVRSGPGLSYSVTGD-LEQ 60
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G VV + ++W ++R DG GWI L + A + ++ +N+ +PD+
Sbjct: 61 GQTATVVSKQDDWLEVR-VDGQEGWIASWLTTESGDAEKASGQTAVSSVNGLNVRSQPDL 119
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ K+ G + +GEW ++ G++ KQ I
Sbjct: 120 SAAVLTKMNAGDRAEVVSSAGEWIEINFRNSRGFVSKQYI 159
>gi|300309501|ref|YP_003773593.1| hypothetical protein Hsero_0159 [Herbaspirillum seropedicae SmR1]
gi|300072286|gb|ADJ61685.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 149
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 70 GPGIMYTVVC-----TYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
P IMY Y+ +G+PVEVV Y W ++RD GT+ W++ L+ KR +V
Sbjct: 32 APAIMYDAPSEKGRRVYVAPRGMPVEVVLTYGEWSKVRDAAGTLSWVSSKALTPKRMLVV 91
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE-GWIKK 181
S N + +Y D S +V + VLL + E + W + D + G++K
Sbjct: 92 SAANAR--------VYNAADESSPVVFTADKSVLLEMLESPNNGWVKVRHRDGQTGFVKA 143
Query: 182 QKIWG 186
+WG
Sbjct: 144 GDVWG 148
>gi|299529214|ref|ZP_07042659.1| SH3, type 3 [Comamonas testosteroni S44]
gi|298722837|gb|EFI63749.1| SH3, type 3 [Comamonas testosteroni S44]
Length = 157
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+SLI A+ L P LA + E FV+IK + N R P + L+
Sbjct: 13 SSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQPNTRSATLW-ELS 60
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
KG P++V + W +++D + T+GW++ L S +V+ NL P
Sbjct: 61 KGYPLQVTQRKGQWLRVKDHESTLGWVHAPLTSKSPHMVVT--------ARTANLRSGPG 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIWG 186
+ V K+E +L + G W + + GW+ K +WG
Sbjct: 113 QKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|152982073|ref|YP_001354908.1| hypothetical protein mma_3218 [Janthinobacterium sp. Marseille]
gi|151282150|gb|ABR90560.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 149
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G+PVEVV W ++RD G + WI LS KR+ IV+ N K L+ +
Sbjct: 52 RGMPVEVVLTQAGWSKVRDVAGDLAWIEAKALSPKRNVIVTVANLK--------LHTNAE 103
Query: 144 IQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTE-GWIKKQKIWG 186
S +VA + GVLL + S W + D + G+ K ++WG
Sbjct: 104 EASAVVATADKGVLLELAAPPSAGWVKLKHRDGQTGYAKSSEVWG 148
>gi|221066296|ref|ZP_03542401.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
gi|220711319|gb|EED66687.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
Length = 157
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +++ +SLI A+ L P LA + E FV+IK N R P
Sbjct: 1 MSCNRWIRTAATSSLIALGALTAGLLPALAQAQE-----------FVSIKGKTVNVRERP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ L+KG P++V + W +++D++ T+GW++ L S +V+
Sbjct: 50 NTRSATLWE-LSKGYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHMVVT------- 101
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIWG 186
NL P + V K+E +L + G W + + GW+ K +WG
Sbjct: 102 -ARTANLRSGPGQKHNRVGKLEQYEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|317051679|ref|YP_004112795.1| hypothetical protein Selin_1506 [Desulfurispirillum indicum S5]
gi|316946763|gb|ADU66239.1| protein of unknown function DUF1058 [Desulfurispirillum indicum S5]
Length = 147
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V + R N R P V+ T L K P++V+K+ NW Q+ DF+G GWI+ S+ +
Sbjct: 23 YVAVTGDRVNLRAQPSTNAEVLWT-LGKYFPLKVLKQQGNWYQVEDFEGDKGWIHNSVAN 81
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-T 175
+ ++ N +N+ S I+ + GV I W + D
Sbjct: 82 KENRGVIVIRNN-------VNVRSSNSTNSDILFRTSYGVAFRIIGQRSNWYQVEHPDGH 134
Query: 176 EGWIKKQKIWG 186
+GWI+ +WG
Sbjct: 135 QGWIRGDLLWG 145
>gi|229552371|ref|ZP_04441096.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|258539742|ref|YP_003174241.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
gi|229314273|gb|EEN80246.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|257151418|emb|CAR90390.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
Length = 440
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y ++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKAESVNVRLGPGLAYGIMG-QVKSGNELTIIGSKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A S N P+ + Y D + + V + +E G+W YN +
Sbjct: 93 DQSEAATTSAKVATVNQPVNVREYASQDAKQLGTLNAGDSVKVVYQE--GDWTQIAYN-N 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|199599335|ref|ZP_03212733.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|258508561|ref|YP_003171312.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|199589774|gb|EDY97882.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|257148488|emb|CAR87461.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|259649868|dbj|BAI42030.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
Length = 440
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y ++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKAESVNVRLGPGLAYGIMG-QVKSGNELTIIGSKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A S N P+ + Y D + + V + +E G+W YN +
Sbjct: 93 DQSEAATTSAKVATVNQPVNVREYASQDAKQLGTLNAGDSVKVVYQE--GDWTQIAYN-N 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|134096127|ref|YP_001101202.1| hypothetical protein HEAR2971 [Herminiimonas arsenicoxydans]
gi|133740030|emb|CAL63081.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 132
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G+PVE+V W ++RD G + W+ S L+ KR+ + + N K L+ +
Sbjct: 35 RGMPVEIVLTQNGWSKVRDAAGDLSWVETSALTSKRNVMATTANLK--------LHAAAE 86
Query: 144 IQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWG 186
S +VA V+ GVLL + SG + G+ K ++WG
Sbjct: 87 ETSAVVATVDKGVLLELVAPPASGWVKLKHRDGPIGFAKTAEVWG 131
>gi|94263262|ref|ZP_01287078.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93456345|gb|EAT06469.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+I + N R GPG ++++ L KG P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 31 MVSIDRPKVNMRDGPGTNHSILWE-LGKGYPLMVIGRQGNWLKVRDFEDDEGWVYQPLVG 89
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
+V +N+ P + +V + + GV+L E W +
Sbjct: 90 RTPHLVVK--------VRIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENGL 141
Query: 176 EGWIKKQKIWG 186
GW+ + +WG
Sbjct: 142 TGWVSRSLLWG 152
>gi|94271443|ref|ZP_01291956.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93450440|gb|EAT01626.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+I + N R GPG ++++ L KG P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 31 MVSIDRPKVNMRGGPGTNHSILWE-LGKGYPLMVIGRQGNWLKVRDFEDDEGWVYQPLVG 89
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
+V +N+ P + +V + + GV+L E W +
Sbjct: 90 RTPHLVVK--------VRIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENGL 141
Query: 176 EGWIKKQKIWG 186
GW+ + +WG
Sbjct: 142 TGWVSRSLLWG 152
>gi|99082271|ref|YP_614425.1| SH3, type 3 [Ruegeria sp. TM1040]
gi|99038551|gb|ABF65163.1| SH3 type 3 [Ruegeria sp. TM1040]
Length = 227
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDF- 103
++ E +P+ F ++ASRAN R+GPG Y V+ L G V V+ + E+ W + +
Sbjct: 152 RQAIEPEPIGEFRKVRASRANVRLGPGTNYPVLMQLLA-GDNVRVLNDDESGWSLLENPK 210
Query: 104 DGTIGWINKSLLSGKRS 120
G +GWI SLLS K+S
Sbjct: 211 TGQVGWIAASLLSAKQS 227
>gi|121594156|ref|YP_986052.1| SH3 type 3 domain-containing protein [Acidovorax sp. JS42]
gi|222111126|ref|YP_002553390.1| sh3 type 3 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606236|gb|ABM41976.1| SH3, type 3 domain protein [Acidovorax sp. JS42]
gi|221730570|gb|ACM33390.1| SH3 type 3 domain protein [Acidovorax ebreus TPSY]
Length = 158
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+IK + N R P + L +G P++V + W Q+RDF+ +GW+ L S
Sbjct: 36 FVSIKGNAVNVREKPSTRSATLWE-LGRGYPLQVQQRKGRWLQVRDFEEPLGWVYAPLTS 94
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+V+ NL P Q V K++ ++ SG W D +
Sbjct: 95 KTPHRVVT--------ARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARVQREDGQ 146
Query: 177 -GWIKKQKIWG 186
GW+ ++ WG
Sbjct: 147 KGWVARRLTWG 157
>gi|51246128|ref|YP_066012.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
gi|50877165|emb|CAG37005.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
Length = 156
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+FVTI N R GP +V L +G P+ VV + +W ++ D++ GW+ L+
Sbjct: 31 QFVTIAKDGVNIRKGPTTKEEIVME-LFEGWPLRVVNKKNDWYEVVDYEKDRGWVYAPLV 89
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+ IV+ +KT N+ P S ++A+VE GV+LT W ++
Sbjct: 90 RKNDTVIVNV--KKTG-----NMRSGPGKNSPVIAEVERGVVLTRITVKDGWVKVKHSQG 142
Query: 175 TEGWIKKQKIW 185
+ GWI K +W
Sbjct: 143 SVGWIYKTLLW 153
>gi|224368207|ref|YP_002602370.1| hypothetical protein HRM2_10940 [Desulfobacterium autotrophicum
HRM2]
gi|223690923|gb|ACN14206.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 155
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 22 LQNSLIFTLAIYFYLAPIL---ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
L + +AI+F + A + E+ R +T K AN R GPG Y +
Sbjct: 8 LCRDITLCVAIFFCMGAWFCQGAWAQER---------RCITSKI--ANVRSGPGTNYETL 56
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
T P+ +V++ ++W + +DF+G +GWI+ SL+ S I K+N N+
Sbjct: 57 WQVETY-YPILIVEKKDSWLKFKDFEGDMGWIHGSLVGDAPSVITV----KSN----CNV 107
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIW 185
P IV VE GV + + +W + D + GWI K +W
Sbjct: 108 RSGPGPVHPIVFTVERGVPFKVLKQQSDWLEVEHGDGDRGWIYKPLVW 155
>gi|253995941|ref|YP_003048005.1| hypothetical protein Mmol_0568 [Methylotenera mobilis JLW8]
gi|253982620|gb|ACT47478.1| protein of unknown function DUF1058 [Methylotenera mobilis JLW8]
Length = 150
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L++ PVEVV W ++RD G++ W+ LS KRS +V T N + +
Sbjct: 49 LSQSYPVEVVVNLGEWLKVRDAQGSMNWVEAKQLSTKRSVMV------TKN--LTEMRVR 100
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
PD+ + +VA +E V+L + E GW+K + GI
Sbjct: 101 PDVAADLVATLEKDVVLELMEAKA---------NNGWLKVKHRDGI 137
>gi|91776536|ref|YP_546292.1| hypothetical protein Mfla_2184 [Methylobacillus flagellatus KT]
gi|91710523|gb|ABE50451.1| protein of unknown function DUF1058 [Methylobacillus flagellatus
KT]
Length = 141
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
LA+ L P++A + E F +P+ V A A + L +G PVE
Sbjct: 2 LAVTMLLMPVMASAVE---FRSVAVPKAVVYDAPSAQGK---------KTFILGQGYPVE 49
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ + +W ++RD G++ WI L+ KR+ +V ++ + D S ++
Sbjct: 50 IIVDLGDWLKVRDAQGSLNWIEAKQLANKRTVLVKGGQA--------DIRQAADAASALL 101
Query: 150 AKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWG 186
K + V+L + E +G + G+I +WG
Sbjct: 102 GKADTDVVLDMLEPPVNGWIKVKHRDGITGYILASSLWG 140
>gi|325982746|ref|YP_004295148.1| hypothetical protein NAL212_2154 [Nitrosomonas sp. AL212]
gi|325532265|gb|ADZ26986.1| protein of unknown function DUF1058 [Nitrosomonas sp. AL212]
Length = 160
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 18/97 (18%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+ LPVEVV + E W ++RD G++ W+ K LS +R IV P+ ++++ D
Sbjct: 63 RHLPVEVVVDVEGWAKVRDSSGSLAWVQKKDLSQQRYVIVIV-------PL-ADVHQSAD 114
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
I+S ++ +VE +++ EW D +GW+K
Sbjct: 115 IKSELIFQVEENIVM-------EWMPS---DIQGWVK 141
>gi|320354278|ref|YP_004195617.1| SH3 type 3 domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122780|gb|ADW18326.1| SH3 type 3 domain protein [Desulfobulbus propionicus DSM 2032]
Length = 149
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V++ N R GP T + L G P+E++ + W ++ D++G G+I +SL+
Sbjct: 28 EYVSVVKDGVNLRSGPN-TNTDILYQLPSGYPLEILSKEGQWLKVSDYEGDKGYITESLV 86
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S IV N+ P +V K V+ E G+W + D
Sbjct: 87 SKTPYVIVKVKE--------CNIRSGPSANDSVVGKGVKDVIFKKVEQKGDWIKISHPDL 138
Query: 176 EGWIKKQKIW 185
GW++K +W
Sbjct: 139 TGWVQKDLVW 148
>gi|56964861|ref|YP_176592.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
gi|56911104|dbj|BAD65631.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
Length = 1398
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-----G 117
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L+
Sbjct: 867 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKAGNRT-GWVSADYLNVSNNQA 924
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K ++ + +R T +NL P+ S I+ + G L I + G W + G
Sbjct: 925 KTESVETVIDRGTTTA-RLNLRVDPNTSSKIITTLNNGQQLDILKKQGSWYYVKVGSQTG 983
Query: 178 WIKKQKI 184
W+ Q +
Sbjct: 984 WVSSQYV 990
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
E+ P F T A R N R GPG +++V T L K VE++ + NW QI D T G
Sbjct: 282 LEQLPTGTFGTTTA-RLNVRTGPGTSHSIVTT-LDKDTKVELLAKQGNWYQIA-VDNTTG 338
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIY------INLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ L + + + + Y +NL +P+ S ++ + G L I +
Sbjct: 339 FVSGDYLKLDKPSEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILK 398
Query: 163 CSGEWCFGYNLDTEGWI 179
G W GW+
Sbjct: 399 KEGNWYRVRAGHQSGWV 415
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGKRS 120
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L SG +
Sbjct: 725 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKAGNRT-GWVSVDYLNVSGSGN 782
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+P N +NL I+ + G + + + G W + GW+
Sbjct: 783 VDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGWV 841
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R G G ++++ T LTKG VE++K+ W Q++ + T GW++ L+ S
Sbjct: 441 ARLNLRSGAGTNHSIITT-LTKGQKVELLKKQGGWYQVKAGNRT-GWVSADYLNVNGSGN 498
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V +P + +NL I+ + G + + + G W + GW+
Sbjct: 499 VDNAPSSGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGWV 557
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGKRS 120
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L SG +
Sbjct: 583 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKAGNRT-GWVSVDYLNVSGSGN 640
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+P + +NL I+ + G + + + G W + GW+
Sbjct: 641 VDNTPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGWV 699
>gi|82702254|ref|YP_411820.1| hypothetical protein Nmul_A1125 [Nitrosospira multiformis ATCC
25196]
gi|82410319|gb|ABB74428.1| Protein of unknown function DUF1058 [Nitrosospira multiformis ATCC
25196]
Length = 162
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++ LPVE + + + W ++RD +G + W+ + LS KR +V+ +P+ ++Y+
Sbjct: 64 SRNLPVEAIVKVDGWVKVRDSEGALAWVEEKALSEKRHILVT-------SPL-ADVYQVA 115
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTE-GWIKKQKIWG 186
I S ++ +V+ GV+L + + W + D + G+++ ++WG
Sbjct: 116 TINSPLMFQVQQGVILEWLEPPANGWVRVRHRDGQTGYVRTSQVWG 161
>gi|160898736|ref|YP_001564318.1| hypothetical protein Daci_3295 [Delftia acidovorans SPH-1]
gi|160364320|gb|ABX35933.1| protein of unknown function DUF1058 [Delftia acidovorans SPH-1]
Length = 158
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A++H +E FV++K + N R P + L KG P++VV+ W ++
Sbjct: 29 AVAHARE---------FVSVKGTSVNVRQQP-TTRSATLWELGKGYPLQVVQRKGQWLRV 78
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLT 159
RD + T+GW++ + L+GK +V NL P +V K+ E V+ T
Sbjct: 79 RDNESTLGWVH-APLTGKTPHMVV-------TGRTANLRAGPGQNHRVVGKLAEMEVVRT 130
Query: 160 IRECSGEWC-FGYNLDTEGWIKKQKIWG 186
+R+ G W + +GW+ + WG
Sbjct: 131 LRK-QGSWAQVQRDNGQKGWVARSLTWG 157
>gi|38603523|dbj|BAD02898.1| bacteriolytic enzyme [Bacillus clausii]
Length = 1333
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-----G 117
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L+
Sbjct: 857 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKVGNRT-GWVSADYLNVSNNQA 914
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K ++ + +R T +NL P+ S I+ + G L I + G W + G
Sbjct: 915 KTESVETVIDRGTTTA-RLNLRVDPNTSSKIITTLNNGQQLDILKKQGSWYYVKVGSQTG 973
Query: 178 WIKKQKI 184
W+ Q +
Sbjct: 974 WVSSQYV 980
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R G G ++++ T LTKG VE++K+ W Q++ + T GW++ L+ S
Sbjct: 431 ARLNLRSGAGTNHSIITT-LTKGQKVELLKKQGGWYQVKAGNRT-GWVSADYLNVNGSGN 488
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V +P + +NL I+ + G + + + G W + GW+
Sbjct: 489 VDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGWV 547
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L+ S
Sbjct: 715 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKAGNRT-GWVSVDYLNVNGSGN 772
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V +P N +NL I+ + G + + + G W + GW+
Sbjct: 773 VDNTPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGWV 831
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
E+ P F T A R N R GPG +++V T L K VE++ + NW QI T G
Sbjct: 272 LEQLPTGTFGTTTA-RLNVRTGPGTSHSIVTT-LDKDTKVELLAKQGNWYQIA-VGNTTG 328
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIY------INLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ L + + + + Y +NL +P+ S ++ + G L I +
Sbjct: 329 FVSGDYLKLDKPSEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILK 388
Query: 163 CSGEWCFGYNLDTEGWI 179
G W GW+
Sbjct: 389 KEGNWYRVRAGHQSGWV 405
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R G G ++++ T L KG VE++K+ W Q++ + T GW++ L+ S
Sbjct: 573 ARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVKAGNRT-GWVSVDYLNVNGSGN 630
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V +P + +NL I+ + G + + + G W + GW+
Sbjct: 631 VDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGWV 689
>gi|81428472|ref|YP_395472.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
gi|78610114|emb|CAI55163.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
Length = 440
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+TIKA+ N R GPG+ Y + +KG + V+ + NW Q+R IGW+ L++
Sbjct: 37 ITIKANVVNVRQGPGLSYDTMGQ-ASKGEVMNVISQKNNWYQVRLSGDKIGWVASWLVNN 95
Query: 118 KRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
+ S NR T + N+ + + S ++ KV G LT+ W YN
Sbjct: 96 TEVSATS--NRVATVTNDFANVRQSSNASSPLLGKVNKGDKLTVLYQQNGWSQVKYN-SA 152
Query: 176 EGWIKKQKI 184
GW++ I
Sbjct: 153 VGWVQSDLI 161
>gi|56475993|ref|YP_157582.1| of unknown function [Aromatoleum aromaticum EbN1]
gi|56312036|emb|CAI06681.1| conserved hypothetical protein of unknown function [Aromatoleum
aromaticum EbN1]
Length = 152
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G PVEVV + W ++RD G + WI + LS KR+ +V+ P + D
Sbjct: 56 GTPVEVVVTLDKWVKVRDAGGALTWIERRALSEKRTVMVA-------VPRAVVRQHPADE 108
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKIWGI 187
S V+ VL + + W + D T+G++K ++WG+
Sbjct: 109 ASAAFETVKDAVLEFVAQSGDGWIQVRHKDGTQGYLKISEVWGL 152
>gi|319792897|ref|YP_004154537.1| hypothetical protein Varpa_2220 [Variovorax paradoxus EPS]
gi|315595360|gb|ADU36426.1| protein of unknown function DUF1058 [Variovorax paradoxus EPS]
Length = 154
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P + V+ N R GPG Y T ++KG P V+ +W + DF+ WI +
Sbjct: 28 PQRQMVSAAVGTLNMRTGPGQRYESHWT-VSKGYPFRVIGRKGSWLHVSDFENDKAWIYR 86
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGY 171
+ + +V + L + P+ +S +V + G +L + G+W +
Sbjct: 87 PMTNKTPHHVV--------KAKAVVLRRSPNARSPVVRRAAYGDVLRTLQRRGDWVKVTH 138
Query: 172 NLDTEGWIKKQKIWG 186
GW+ ++ +WG
Sbjct: 139 EGGGTGWVARRLVWG 153
>gi|229543721|ref|ZP_04432781.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
gi|229328141|gb|EEN93816.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
Length = 487
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-SGKRSAIVSPW 126
R GPG+ Y + K V+++ +W QIR G GWI L+ +G SA S
Sbjct: 42 RSGPGVSYPIAGK-AAKNDTYTVLQKDGDWFQIRLPQGNTGWIAGWLVETGTPSAKQSKQ 100
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ T + + I K PD + IV +E ++T+ G W + + + GW Q
Sbjct: 101 GKITADRLRIR--KAPDQSAAIVGTLEKNAVVTVTRAEGGWVYIESGNVSGWADSQ 154
>gi|94266004|ref|ZP_01289726.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93453433|gb|EAT03852.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 157
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+++ + N R GP + ++ + P+++++ +W +I DF+G GWI LL
Sbjct: 32 YVSVQREKVNIRSGPSTDHEILWEVF-RDFPLQILERRGDWARIVDFEGDEGWIYTPLLG 90
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-T 175
+ IV N+ P ++A V GV+ E +W + D T
Sbjct: 91 NDKRVIV--------QVETANMRVGPSTNYEVMATVRYGVVFEPIERRRDWLKVEHADGT 142
Query: 176 EGWIKKQKIW 185
GWI + +W
Sbjct: 143 TGWITDRLLW 152
>gi|239816373|ref|YP_002945283.1| hypothetical protein Vapar_3400 [Variovorax paradoxus S110]
gi|239802950|gb|ACS20017.1| protein of unknown function DUF1058 [Variovorax paradoxus S110]
Length = 153
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ V+ A N R GPG Y T + +G P V+ +W ++ DF+ W+ + +
Sbjct: 30 QMVSSAAKTLNMRTGPGQRYEAHWT-VGRGYPFRVIGRKGDWLRVSDFENDKAWVYRPMT 88
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
S +V K + L + P +S +V + G +L E G+W +
Sbjct: 89 SKTPHHVV-----KAKVAV---LRRSPSTRSPVVKRAAYGDVLRTLERRGDWVKVRHEGG 140
Query: 175 TEGWIKKQKIWG 186
GW+ ++ +WG
Sbjct: 141 GTGWVARRLVWG 152
>gi|254478958|ref|ZP_05092318.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035104|gb|EEB75818.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 668
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ + LP ++ N R GPG Y ++ T + K + V+ + +W +++ +GT+
Sbjct: 11 VSSTQNLPSYLVTTGDYVNIRKGPGTQYGII-TQVNKNTLLNVLDKSGDWYKVKLQNGTV 69
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GWI +G +A P + K N +N+ K P I+ + + G +L++ SG+W
Sbjct: 70 GWI-----AGWLTATPLPSSIKV-NANDVNIRKGPGTNYGIITQAKKGTVLSVLGKSGDW 123
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
F+ I N R GPG Y ++ T LT+G +E++ E W ++R DG IGW+
Sbjct: 323 FLMITGDVVNIRNGPGTQYDII-TQLTRGYILEMLDASEEWYKVRLKDGRIGWV 375
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
PLP + + A+ N R GPG Y ++ T KG + V+ + +W +++ +GT GWI
Sbjct: 80 PLPSSIKVNANDVNIRKGPGTNYGII-TQAKKGTVLSVLGKSGDWYKVKLPNGTTGWI 136
>gi|257093112|ref|YP_003166753.1| hypothetical protein CAP2UW1_1509 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045636|gb|ACV34824.1| protein of unknown function DUF1058 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 144
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP------WNRKTNNPIY 135
+ +G PVE+V E W ++RD DG++ WI L +R+ IV+ N + P+
Sbjct: 45 IKRGTPVELVVVLEGWSKVRDADGSLAWIESKYLGKRRTLIVTTARGQIRQNADDSAPVS 104
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
K S+ +V PG + +R G+ G+++ +IWG+
Sbjct: 105 FEAEKNV---SLDFVEVVPGGWVKVRHRDGQ---------SGFVRINQIWGL 144
>gi|328953858|ref|YP_004371192.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454182|gb|AEB10011.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 147
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R ++I R N R P +++ KG P+ V K+ +W D++G GW+ + L+
Sbjct: 22 RTMSIARDRVNVRTKPSKRASILFQ-APKGYPIVVKKKTRHWLYFEDWNGNKGWVYRPLV 80
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
S + ++ + + N+ K P + ++A+ + G + + G+W GY +
Sbjct: 81 SAIPTTVI-----RVDTA---NVRKGPGTRRPLIAQAKQGEIYRVLGEQGDWVKIGYYYE 132
Query: 175 TE--GWIKKQKIWG 186
E GWI +WG
Sbjct: 133 NEVVGWIYDDLVWG 146
>gi|116495019|ref|YP_806753.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227534971|ref|ZP_03965020.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|116105169|gb|ABJ70311.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227187428|gb|EEI67495.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 440
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y+++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKADTVNVRLGPGLAYSIMG-QVKSGNELSIIGAKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A N P+ + Y + + + V + +E G W YN
Sbjct: 93 DQSEAATSQAKVATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE--GAWTQIAYNT- 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|239631390|ref|ZP_04674421.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239525855|gb|EEQ64856.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 440
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y+++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKADTVNVRLGPGLAYSIMG-QVKSGNELSIIGAKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A N P+ + Y + + + V + +E G W YN
Sbjct: 93 DQSEAATSQAKVATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE--GAWTQIAYNT- 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|163733836|ref|ZP_02141278.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
gi|161392947|gb|EDQ17274.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
Length = 218
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLS 116
++K SR N R GPG Y VV LT+ VEV+ + N W ++R D G GW+ + LL+
Sbjct: 158 SVKGSRVNMRSGPGTQYDVVA-QLTQSAEVEVLTDTGNGWVELRPLDGGPTGWVAEFLLT 216
Query: 117 G 117
G
Sbjct: 217 G 217
>gi|191638524|ref|YP_001987690.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|190712826|emb|CAQ66832.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|327382560|gb|AEA54036.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei LC2W]
gi|327385757|gb|AEA57231.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei BD-II]
Length = 440
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y+++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKADTVNVRLGPGLAYSIMG-QVKSGNELSIIGAKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A N P+ + Y + + + V + +E G W YN
Sbjct: 93 DQSEAATSQAKVATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE--GAWTQIAYNT- 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|301066578|ref|YP_003788601.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
gi|300438985|gb|ADK18751.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
Length = 440
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++T+KA N R+GPG+ Y+++ + G + ++ +W Q+R IGW+ L+
Sbjct: 34 QYMTVKADTVNVRLGPGLAYSIMG-QVKSGNELSIIGAKNSWYQVRLAGNKIGWVASWLV 92
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+A N P+ + Y + + + V + +E G W YN
Sbjct: 93 DQSEAATSQAKVATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE--GAWTQIAYNT- 149
Query: 175 TEGWIKKQKI 184
T WI +
Sbjct: 150 TAAWITSSSV 159
>gi|255655316|ref|ZP_05400725.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-23m63]
gi|296451301|ref|ZP_06893041.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296880347|ref|ZP_06904310.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
gi|296259907|gb|EFH06762.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296428588|gb|EFH14472.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
Length = 606
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ T L KG VEV+ E W +I+ +DG +G+++ S L G
Sbjct: 101 VTSNSLNMRNGAGTSYRVI-TVLKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYL-GDV 157
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
S + K N +N+ P+ ++ K+ G + + S W
Sbjct: 158 SNSTNKSKTKQVNTTSLNVRSGPNTSYGLLGKLSKGSKVEVISESNGWS 206
>gi|256003918|ref|ZP_05428904.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|255992046|gb|EEU02142.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|316940651|gb|ADU74685.1| NLP/P60 protein [Clostridium thermocellum DSM 1313]
Length = 370
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+KAS N R GPG Y+++ L+ G V ++KE W QI+ +G+ GW++ + ++
Sbjct: 161 VKASALNVRQGPGTSYSII-NQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGTYVN 216
>gi|297568421|ref|YP_003689765.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924336|gb|ADH85146.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 166
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+++ + N R GPG + ++ + P++V+ W QI DF+ GW+ L+
Sbjct: 41 YVSVQRDKINIRSGPGTDHEILWEVF-RDFPLKVISRQGEWAQIEDFEKDRGWVYTPLVG 99
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
++ IV NL P + A V GV+ E +W ++ T
Sbjct: 100 NEKRVIVQ--------VEVANLRVGPGTNYEVKATVRYGVVFEPLERRRDWVKLQHSDGT 151
Query: 176 EGWIKKQKIW 185
GW+ +W
Sbjct: 152 TGWMSTNLLW 161
>gi|125973123|ref|YP_001037033.1| PgdS peptidase. cysteine peptidase. MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281417315|ref|ZP_06248335.1| NLP/P60 protein [Clostridium thermocellum JW20]
gi|125713348|gb|ABN51840.1| PgdS peptidase, Cysteine peptidase, MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281408717|gb|EFB38975.1| NLP/P60 protein [Clostridium thermocellum JW20]
Length = 370
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+KAS N R GPG Y+++ L+ G V ++KE W QI+ +G+ GW++ + ++
Sbjct: 161 VKASALNVRQGPGTSYSII-NQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGTYVN 216
>gi|297537766|ref|YP_003673535.1| hypothetical protein M301_0574 [Methylotenera sp. 301]
gi|297257113|gb|ADI28958.1| protein of unknown function DUF1058 [Methylotenera sp. 301]
Length = 156
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L++ PVEV+ +W ++RD G + W+ LS KR+ +V+ + + +
Sbjct: 55 LSQNYPVEVIVNLGDWLKVRDAQGALNWVEAKQLSNKRTVMVTASKAE--------IRQS 106
Query: 142 PDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLD-TEGWIKKQKIWG 186
D S +VA VE V+L + + S W + D G+I WG
Sbjct: 107 ADATSNLVATVEKDVVLEVVDAKLSNGWLKIKHRDGVAGYILISSTWG 154
>gi|319762489|ref|YP_004126426.1| sh3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|330825660|ref|YP_004388963.1| SH3 type 3 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117050|gb|ADU99538.1| SH3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|329311032|gb|AEB85447.1| SH3 type 3 domain protein [Alicycliphilus denitrificans K601]
Length = 158
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+IK++ N R P + L +G P++V + W ++RDF+ ++GW+ L S
Sbjct: 36 FVSIKSNAVNVRAQP-TTRSDTRWELGRGYPLQVEQRRGQWLKVRDFEESLGWVFAPLTS 94
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDT 175
+V+ L P Q IV ++ ++ SG W +
Sbjct: 95 KTPHRVVT--------APSARLRAGPGTQHKIVGTLQQHEVVRSLGQSGAWAKVQRDGGQ 146
Query: 176 EGWIKKQKIWG 186
+GW+ K+ WG
Sbjct: 147 KGWVAKRLTWG 157
>gi|226311473|ref|YP_002771367.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226094421|dbj|BAH42863.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 631
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + + N R GP + +V T L + V+ +W Q++ +G GW+ L+S
Sbjct: 51 VQVTVDKLNVRSGPSLQDAIV-TSLPNKTVLPVISTKNDWIQVKLPNGQSGWVANWLVST 109
Query: 118 K----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYN 172
+ + A VS + + +N+ P +V + PG I + SGEW N
Sbjct: 110 QQQQQKPATVST-KQVESTTTNLNVRSGPGQTYAVVQTINPGTRYPIVQTSGEWLQIQLN 168
Query: 173 LDTEGWI 179
T+GW+
Sbjct: 169 AGTKGWV 175
Score = 38.5 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+K N R P + T+ G + V+++ +W +I+ DG GW+ ++
Sbjct: 306 TVKTDGLNLRSEPNTSSAIQTTFPV-GSKLSVLEKQGDWYRIKAADGKTGWVAGQHITVD 364
Query: 119 RSAIVSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ ++ +P NP N+ P ++ +V+PG I SGEW
Sbjct: 365 QPSMPTPSGPYVTVMNP-DTNVRSGPSTDHAVIKQVQPGEKYGIANKSGEW 414
>gi|254974850|ref|ZP_05271322.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-66c26]
gi|255092238|ref|ZP_05321716.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CIP 107932]
gi|255313977|ref|ZP_05355560.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-76w55]
gi|255516657|ref|ZP_05384333.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-97b34]
gi|255649756|ref|ZP_05396658.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-37x79]
gi|260682912|ref|YP_003214197.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260686510|ref|YP_003217643.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
gi|260209075|emb|CBA62217.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260212526|emb|CBE03475.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
Length = 607
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G G Y V+ T L KG VEV+ E W +I+ +DG +G+++ S L G S +
Sbjct: 107 NMRNGAGTSYRVI-TVLKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYL-GDVSNSTNK 163
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
K N +N+ P+ ++ K+ G + + S W
Sbjct: 164 SKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWS 206
>gi|255100323|ref|ZP_05329300.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-63q42]
gi|255306261|ref|ZP_05350433.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile ATCC 43255]
Length = 607
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G G Y V+ T L KG VEV+ E W +I+ +DG +G+++ S L G S +
Sbjct: 107 NMRNGAGTSYRVI-TVLKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYL-GDVSNSTNK 163
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
K N +N+ P+ ++ K+ G + + S W
Sbjct: 164 SKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWS 206
>gi|126698902|ref|YP_001087799.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile 630]
gi|55668683|gb|AAV54288.1| Acd [Clostridium difficile 630]
gi|115250339|emb|CAJ68161.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium
difficile]
Length = 607
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G G Y V+ T L KG VEV+ E W +I+ +DG +G+++ S L G S +
Sbjct: 107 NMRNGAGTSYRVI-TVLKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYL-GDVSNSTNK 163
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
K N +N+ P+ ++ K+ G + + S W
Sbjct: 164 SKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWS 206
>gi|301053511|ref|YP_003791722.1| NLP/P60 family protein [Bacillus anthracis CI]
gi|300375680|gb|ADK04584.1| NLP/P60 family protein [Bacillus cereus biovar anthracis str. CI]
Length = 399
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWLKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S +V N + + P + ++ V G +L + W
Sbjct: 193 GSYVV--------NTGALKVRTGPATYNAVIGGVTNGTVLNVTGAENGW 233
>gi|253998267|ref|YP_003050330.1| hypothetical protein Msip34_0555 [Methylovorus sp. SIP3-4]
gi|313200340|ref|YP_004038998.1| hypothetical protein MPQ_0580 [Methylovorus sp. MP688]
gi|253984946|gb|ACT49803.1| protein of unknown function DUF1058 [Methylovorus sp. SIP3-4]
gi|312439656|gb|ADQ83762.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 151
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ ++A+ L P +A + E + +PR + A + +Y + +G
Sbjct: 8 VLLSIAMILALTPSVASALE---YRSVAVPRAILYDAPSGQGKK----LYVI-----WQG 55
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P+EV+ +W ++RD G + WI L+ KR+ IV ++ + D
Sbjct: 56 YPLEVIVNLGDWIKVRDNRGGLNWIEAKQLATKRTVIVI--------ATQASIQQSADAA 107
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
S +V VE V+L + E SG GWIK
Sbjct: 108 SSVVGTVEKDVVLDMLEMSG----------NGWIK 132
>gi|255263880|ref|ZP_05343222.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
gi|255106215|gb|EET48889.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
Length = 180
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 20 KILQNSLIFTLAIY----FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ +Q TLA + +ALS +EI E R ++ A+R N R GPG +
Sbjct: 77 RAVQTPATVTLATASSDDVAIVETVALSQVEEIEEVVKDIR--SVDANRVNMRAGPGTNF 134
Query: 76 TVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLSGKRS 120
V+ LT+G E+++E ++ W ++R D G +GW+ LLS K S
Sbjct: 135 GVLA-KLTRGTEAEILEENDDGWVRLRVTDSGQVGWMAARLLSEKIS 180
>gi|163740200|ref|ZP_02147594.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
gi|161386058|gb|EDQ10433.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
Length = 233
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDF- 103
+EI E P +I A+R N R GPG +Y +V L+ G V V ++ W +R
Sbjct: 160 QEIVE--PDADIRSITATRVNMRSGPGTVYPIV-DRLSNGEEVAVFEDIGTGWLHLRTLK 216
Query: 104 DGTIGWINKSLLSGKR 119
DG +GWI SL+S KR
Sbjct: 217 DGKVGWIAASLVSQKR 232
>gi|319945280|ref|ZP_08019542.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741850|gb|EFV94275.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
Length = 208
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G+PVEV+ + W ++RD +G I W+ + LS +R+ + S + LY++P+
Sbjct: 110 RGMPVEVIAVLQGWVKVRDMEGDIAWVLRDDLSDRRTVVAS---------TTVPLYQEPN 160
Query: 144 IQSIIVAKVEPGVLLTIR----ECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ + GV+ + + +G + G+++ ++WGI
Sbjct: 161 ADAPQWFEAARGVVFELEDDKPDDAGFVRVRHADGQSGYVELGQVWGI 208
>gi|254475752|ref|ZP_05089138.1| SH3, type 3 [Ruegeria sp. R11]
gi|214029995|gb|EEB70830.1| SH3, type 3 [Ruegeria sp. R11]
Length = 225
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENW 97
I A + EI + K R VT A+R N R GPG +Y V+ LT G V+V+++ W
Sbjct: 145 ITAAAVVDEIEDPKADIRSVT--ATRVNMRSGPGTVYPVL-DQLTNGAEVQVIEDIGTGW 201
Query: 98 RQIRDFDGT-IGWINKSLLSGKRS 120
+R +G +GWI SL+S K S
Sbjct: 202 LHLRTVEGGKVGWIAASLISKKGS 225
>gi|163739411|ref|ZP_02146821.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
gi|161387164|gb|EDQ11523.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
Length = 233
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDF- 103
+EI E P +I A+R N R GPG +Y +V L+ G V V ++ W +R
Sbjct: 160 QEIVE--PDADIRSITATRVNMRSGPGTVYPIV-DRLSNGEEVAVFEDIGTGWLHLRTVK 216
Query: 104 DGTIGWINKSLLSGKR 119
DG +GWI SL+S KR
Sbjct: 217 DGKVGWIAASLVSQKR 232
>gi|163791446|ref|ZP_02185855.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
gi|159873310|gb|EDP67405.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
Length = 439
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK--ASRANSRIGPGIMYTVVC 79
++N LI F I+AL F L TIK AS N R GPG+ Y ++
Sbjct: 1 MENKLILKKQKKFVTLFIIALFIGLTAFATVVLANQGTIKVDASVVNVRTGPGLSYDIM- 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINL 138
T +T G V ++ E W ++R + IGWI L+ SA + T +N+
Sbjct: 60 TQVTGGEKVTMLTEENEWYKVRLSNDQIGWIASWLIENTEVSAATNKIGVVTGEE--VNI 117
Query: 139 YKKPDIQSIIVAKVEPGVLLTI 160
+ + S I+ KV G LT+
Sbjct: 118 RSESNADSDILGKVTKGTELTV 139
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYI- 136
+TKG + V+ + E W Q++ + G + WI+ L+ S + V+ + + PI
Sbjct: 131 VTKGTELTVLFQQEGWTQVQYY-GQVAWISSELIKMTESATETTTVAVAEEEDSAPIQTV 189
Query: 137 -------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N+ P I+S +V E G T G+W
Sbjct: 190 TTRSSGTNIRNSPSIESGVVTTAEKGESFTYLSTEGDW 227
>gi|259416274|ref|ZP_05740194.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
gi|259347713|gb|EEW59490.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
Length = 217
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDF-DG 105
+ +P+ I+ASRAN R+GPG + V+ L G V V+ ++ W + + G
Sbjct: 144 VATPEPIGDMRKIRASRANVRLGPGTRFPVLMQLLA-GDKVRVLNDDHSGWSLLENPKTG 202
Query: 106 TIGWINKSLLSGKRS 120
+GWI SLLS K+S
Sbjct: 203 QVGWIAASLLSAKQS 217
>gi|302877468|ref|YP_003846032.1| hypothetical protein Galf_0223 [Gallionella capsiferriformans ES-2]
gi|302580257|gb|ADL54268.1| protein of unknown function DUF1058 [Gallionella capsiferriformans
ES-2]
Length = 150
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+++ +P E + +NW ++RD G + W+ K L+ K+ +V P P+ +++ +
Sbjct: 51 VSRYMPFEAIVTLDNWVKVRDRTGGLYWLEKHALTNKKYVVVIP-------PL-VDVRAE 102
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTE-GWIKKQKIWG 186
PD + V +V V L E +G W + D E G+++ ++WG
Sbjct: 103 PDEGAARVCQVRAQVALEWFESTGTGWIKVRHKDGETGFVRSSEVWG 149
>gi|300117554|ref|ZP_07055341.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
gi|298725089|gb|EFI65744.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
Length = 420
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G IG+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGIGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|86135754|ref|ZP_01054333.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
gi|85826628|gb|EAQ46824.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
Length = 237
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-IGWINKSLLSGK 118
I+ASR N R GPG +Y V L + V W Q+R G IGW+ SL+S K
Sbjct: 176 IRASRVNMRQGPGTIYPVTARLLAGDEVLIVEDNGTGWLQLRTRIGNKIGWVAASLVSKK 235
Query: 119 RS 120
RS
Sbjct: 236 RS 237
>gi|329900864|ref|ZP_08272613.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549337|gb|EGF33908.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
Length = 149
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+ +PVEV+ Y W ++RD G + W+ L KR I + + D
Sbjct: 52 RNMPVEVILTYGEWSKVRDASGDLSWVESKQLDAKRHVITKAAGTR--------VRAAAD 103
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTE-GWIKKQKIWG 186
+ ++ V+ V+L + E S W + D + G++K +WG
Sbjct: 104 EMAPVIFSVDKSVILEMAEPSTAGWVKVRHRDGQGGFVKATDVWG 148
>gi|118595211|ref|ZP_01552558.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
gi|118440989|gb|EAV47616.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
Length = 154
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ Q L+ L I + P+L+ FV IK+ + GP T
Sbjct: 5 RVFQGLLLAVLFIAVSIQPVLS-------------AEFVAIKSKKTILYEGPS-DSTSKE 50
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+T+ P++V+ + ++W +++D +G I W+ S +R+ + K+N + ++
Sbjct: 51 FIVTESYPLKVLVKLKDWTKVKDHEGKISWVKVQDTSNERTVM----TLKSN----VIVF 102
Query: 140 KKPDIQSIIVAKVEPGV---LLTIRECSGEWCFGYNL--DTEGWIKKQKIWGI 187
KP S+ +A V V LL+ + G W L + EG+I+ Q +WGI
Sbjct: 103 YKPSFSSVKLADVGKYVALKLLSPIQADG-WIEVKTLTQNIEGFIRVQDVWGI 154
>gi|110678711|ref|YP_681718.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
gi|109454827|gb|ABG31032.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
Length = 218
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLS 116
++K +R N R GPG Y VV LT+ VEV+ + N W ++R + G GW+ + LL+
Sbjct: 158 SVKGTRVNMRSGPGTQYDVVA-QLTQSEEVEVLTDTGNGWVELRPLEGGPTGWVAEFLLT 216
Query: 117 G 117
G
Sbjct: 217 G 217
>gi|326801274|ref|YP_004319093.1| NLP/P60 protein [Sphingobacterium sp. 21]
gi|326552038|gb|ADZ80423.1| NLP/P60 protein [Sphingobacterium sp. 21]
Length = 396
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F I S N R P + L G PV+V+++ E + +R DG I W++++ +S
Sbjct: 101 FGVINVSVGNMRTFPKNAAEMASQALL-GWPVDVLRKKEGYYLVRTIDGYISWLDEAAIS 159
Query: 117 GKRSAIVSPWNRKTNNPI---YINLYKKPDIQSIIVAKVEPGVLL 158
K + WNRK + Y ++Y D +S+ V+ + G +L
Sbjct: 160 LKTKPEIDDWNRKEKVIVVGDYGHVYSDLDKRSLRVSDIVMGNIL 204
>gi|164687226|ref|ZP_02211254.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
gi|164603650|gb|EDQ97115.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
Length = 305
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +L+ T +I + PI E + + + VT+ SR N R GP + Y+++
Sbjct: 8 VLAGALVATSSI---VMPIA------ETSQVEAATQTVTV-TSRVNFRKGPSMNYSIMRK 57
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-NRKTNNPIYINLY 139
L KG + + + NW +++ +DGT G++ K +SG S+ + R N + +N+
Sbjct: 58 -LYKGYKLTYLGKNGNWIKVK-YDGTTGYVYKDYVSGYSSSSDNKGITRYVNASVGLNVR 115
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
K P + K+ G + + S W
Sbjct: 116 KGPSTSYSKLGKLSYGKSVKVLSTSNGWS 144
>gi|168217965|ref|ZP_02643590.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
gi|182380004|gb|EDT77483.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
Length = 553
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP + + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+IR FDG +G+ +KS ++
Sbjct: 457 EIR-FDGKVGYASKSYIT 473
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|328957463|ref|YP_004374849.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
gi|328673787|gb|AEB29833.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
Length = 438
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + AS N R GPG+ Y ++ T +T G V ++ E W ++R + IGWI L+
Sbjct: 39 IKVDASVVNVRTGPGLSYDIM-TQVTGGEKVTMLTEENEWYKVRLSNDQIGWIASWLIEN 97
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
SA + T +N+ + + S I+ KV G LT+
Sbjct: 98 TEVSAATNKIGVVTGEE--VNIRSESNADSTILGKVVNGTELTV 139
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 17/115 (14%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI- 122
R+ S I+ VV G + V+ + E W QI+ + G + WI+ L+ SA
Sbjct: 118 RSESNADSTILGKVV-----NGTELTVLFQQEGWTQIQYY-GQVAWISSELIEITESATE 171
Query: 123 ----------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+P T N+ P ++S +VA E G T G+W
Sbjct: 172 TTTVAVAEENSAPIQTVTTRSGSTNIRTSPSVESSVVATAEKGESFTYLSAEGDW 226
>gi|296134063|ref|YP_003641310.1| N-acetylmuramoyl-L-alanine amidase [Thermincola sp. JR]
gi|296032641|gb|ADG83409.1| N-acetylmuramoyl-L-alanine amidase [Thermincola potens JR]
Length = 557
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ V I A+ N R GPG Y V+ T + KG+ ++V+++ W + DG GW+ +
Sbjct: 90 KSVVITATSLNVRNGPGTTYKVIAT-VKKGMVLKVLRQTTGWYNVVLPDGRNGWVAAGYV 148
Query: 116 SGKRSAIVSPWNRKTNNPIY----------------INLYKKPDIQSIIVAKVEPGVLLT 159
+ K +P K P +N+ P + AKV G +
Sbjct: 149 TVKNLNQPNPQVPKPETPGADLGTPTEKNGVVKGGIVNVRSGPGTTYPVAAKVTNGTRVR 208
Query: 160 IRECSGEWCFGYNLD-TEGWIKK 181
I + EW D EGWI K
Sbjct: 209 ITRETAEWYKVTLPDGKEGWIAK 231
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P + +K N R GPG Y V +T G V + +E W ++ DG GWI K
Sbjct: 173 PTEKNGVVKGGIVNVRSGPGTTYPVAAK-VTNGTRVRITRETAEWYKVTLPDGKEGWIAK 231
Query: 113 SLL 115
L+
Sbjct: 232 YLV 234
>gi|164688525|ref|ZP_02212553.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
gi|164602938|gb|EDQ96403.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
Length = 539
Score = 41.6 bits (96), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R GP Y+V+ T LTKG VEV+ E W +I + + IG+++ LS ++
Sbjct: 80 VSASSLNMRKGPSTSYSVITT-LTKGEEVEVISEENGWAKI-NHNSKIGYVSSKYLSDEK 137
>gi|228990993|ref|ZP_04150956.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
gi|228768773|gb|EEM17373.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
Length = 438
Score = 41.6 bits (96), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
Y++ + EK + T+ S N R GP +TVV T + KG V+VV E
Sbjct: 114 YVSSDFVTTGEKTGTAVQQGTGNYTVNVSSLNVRTGPSASHTVVGT-VGKGQTVQVVGEV 172
Query: 95 ENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNN 132
++W +I + +G G+++K ++ G + VS K NN
Sbjct: 173 QDWFKI-NHNGGTGYVSKDFVTKGGTTTNVSTETEKPNN 210
>gi|228997080|ref|ZP_04156711.1| Enterotoxin [Bacillus mycoides Rock3-17]
gi|229004735|ref|ZP_04162471.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228756528|gb|EEM05837.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228762705|gb|EEM11621.1| Enterotoxin [Bacillus mycoides Rock3-17]
Length = 440
Score = 41.6 bits (96), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
Y++ + EK + T+ S N R GP +TVV T + KG V+VV E
Sbjct: 116 YVSSDFVTTGEKTGTTVQQGTGNYTVNVSSLNVRTGPSASHTVVGT-VGKGQTVQVVGEV 174
Query: 95 ENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNN 132
++W +I + +G G+++K ++ G + VS K NN
Sbjct: 175 QDWFKI-NHNGGTGYVSKDFVTKGGTTTNVSTETEKPNN 212
>gi|126731141|ref|ZP_01746949.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
gi|126708443|gb|EBA07501.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
Length = 723
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R GPG Y + T + +G V V + W IR +G GW++ + LS R +
Sbjct: 577 NVRSGPGTQYGRI-TAVDRGTQVTVTGSSDGWSNIRLPNGLTGWVSATYLSSSRPSAQRQ 635
Query: 123 -------VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++P++ +T + Y+N+ P + I+ +V G + + S W
Sbjct: 636 CYATVTNLNPYSSRTRADGSGYLNVRSAPSTRGNILMEVYLGDTVQVVGQSNGW 689
>gi|84499896|ref|ZP_00998162.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
gi|84391830|gb|EAQ04098.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
Length = 192
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIY---FYLAPIL-ALSHEKEIFEKKPLPRFVTIKASRAN 66
S DLR+ + L + LA + AP L + + + +P P + +R N
Sbjct: 79 SFDLRRPDEEELASVDPAVLASFGGVLETAPDPETLDPQPAVVKPEPAPDMREVSGNRVN 138
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLSG 117
R GPG +++V L++G VEV+ E N W ++R D G +GW+ L++
Sbjct: 139 MRNGPGTNHSIVA-RLSRGDSVEVLAEPGNGWLKLRVGDTGRVGWMADFLVTA 190
>gi|159900165|ref|YP_001546412.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893204|gb|ABX06284.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 391
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP + Y + L P+ VV +E W Q+ +GW++ S ++
Sbjct: 112 VASEELNLRDGPSVDYLPMAILLNT-TPLTVVGRFEGWLQVVTPQRALGWVDDSYVALAS 170
Query: 120 SAIVSPW-NRKTN-NPIYI--------NLYKKPDIQSIIVA--KVEPGVLLTIRECSGEW 167
SA P N + NP+ + N+ KP ++ I+ E G + +++ G +
Sbjct: 171 SAQTLPQVNLHADPNPVLVAGLTVERANVRSKPQTEAEIITTLSAEHGQVNLLQQREGWF 230
Query: 168 CFGYNLDTEGWIKKQ 182
N TEGW+ +
Sbjct: 231 NVRTNDGTEGWVSAE 245
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 49 FEKKPLPRFVT-IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P P V + RAN R P ++ T + V ++++ E W +R DGT
Sbjct: 180 LHADPNPVLVAGLTVERANVRSKPQTEAEIITTLSAEHGQVNLLQQREGWFNVRTNDGTE 239
Query: 108 GWINKSLLSGK 118
GW++ LL
Sbjct: 240 GWVSAELLQAD 250
>gi|84684088|ref|ZP_01011990.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84688113|ref|ZP_01015965.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84663876|gb|EAQ10388.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
gi|84667841|gb|EAQ14309.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
Length = 154
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y ++ + G VE ++ W ++R G +GW L R A +
Sbjct: 36 NLRTGPGSQYNIIRK-MYHGSAVETLEYANGWVRVRHESGAVGWAFAKYLV--RPAATNV 92
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ N Y+NL P + I+ + G +T+ E SG W
Sbjct: 93 RYVYSPNDGYLNLRTGPGTRYQIIRPMYNGEAVTLLERSGGWV 135
>gi|167638368|ref|ZP_02396645.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
gi|167513669|gb|EDR89038.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
Length = 420
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|30261984|ref|NP_844361.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47777984|ref|YP_018596.2| NLP/P60 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184824|ref|YP_028076.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|165870129|ref|ZP_02214785.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170706012|ref|ZP_02896474.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|177650724|ref|ZP_02933621.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190566425|ref|ZP_03019343.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227815228|ref|YP_002815237.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229600369|ref|YP_002866355.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
gi|254734851|ref|ZP_05192563.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254755506|ref|ZP_05207540.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Vollum]
gi|254760042|ref|ZP_05212066.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Australia 94]
gi|30256610|gb|AAP25847.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47551689|gb|AAT31071.2| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. 'Ames Ancestor']
gi|49178751|gb|AAT54127.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|164714017|gb|EDR19538.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170129014|gb|EDS97879.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|172083185|gb|EDT68246.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190562560|gb|EDV16527.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227007237|gb|ACP16980.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229264777|gb|ACQ46414.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
Length = 420
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|65319267|ref|ZP_00392226.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 420
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|228927046|ref|ZP_04090112.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|254721306|ref|ZP_05183096.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. A1055]
gi|228832781|gb|EEM78352.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 418
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAI 122
SA+
Sbjct: 189 GSAV 192
>gi|49481179|ref|YP_036119.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218903105|ref|YP_002450939.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228933283|ref|ZP_04096139.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229090967|ref|ZP_04222191.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|229121532|ref|ZP_04250759.1| Enterotoxin [Bacillus cereus 95/8201]
gi|49332735|gb|AAT63381.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218538332|gb|ACK90730.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228661996|gb|EEL17609.1| Enterotoxin [Bacillus cereus 95/8201]
gi|228692368|gb|EEL46103.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|228826444|gb|EEM72221.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 420
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|255693901|ref|ZP_05417576.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
gi|260620266|gb|EEX43137.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
Length = 327
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+FY + LS + + E +P+P + + S N R G + + T G+PV
Sbjct: 7 FFFYFLAMATLSLKAQ--EIRPMPADSAYGVVHISVCNMR-EEGKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTYEKPDAT 122
Query: 146 SIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGHF 144
>gi|167632737|ref|ZP_02391063.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170686539|ref|ZP_02877760.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
gi|254684548|ref|ZP_05148408.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254741252|ref|ZP_05198940.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Kruger B]
gi|167531549|gb|EDR94214.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170669615|gb|EDT20357.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
Length = 420
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|260173879|ref|ZP_05760291.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|315922143|ref|ZP_07918383.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|313696018|gb|EFS32853.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
Length = 326
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L Y +LA + A +EI +P+P + + S N R G + + T G+
Sbjct: 6 LLFYCFLAMMAASLKAQEI---RPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGM 61
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPD 143
PV+V+ +Y W +I+ D IGW+++ +++ WNR Y Y+KPD
Sbjct: 62 PVKVL-QYNGWYEIQTPDDYIGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPD 120
Query: 144 IQSIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 121 ESSQPVSDVVAGNRLKWEGSKGHF 144
>gi|125974304|ref|YP_001038214.1| peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|256003477|ref|ZP_05428467.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|125714529|gb|ABN53021.1| Peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|255992501|gb|EEU02593.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|316941452|gb|ADU75486.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
Length = 503
Score = 41.2 bits (95), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 43 SHEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
S E I ++ +P + + AN R GPG + ++ T +T G + V+ NW Q+
Sbjct: 84 STELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGII-TRMTNGARLPVIGFSNNWYQV 142
Query: 101 RDFDGTIGWINKSLL-----SGKR 119
R ++G GWI+ S++ SG+R
Sbjct: 143 RLYNGREGWISGSIVTRNVYSGRR 166
>gi|281418359|ref|ZP_06249379.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|281409761|gb|EFB40019.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
Length = 503
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 43 SHEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
S E I ++ +P + + AN R GPG + ++ T +T G + V+ NW Q+
Sbjct: 84 STELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGII-TRMTNGARLPVIGFSNNWYQV 142
Query: 101 RDFDGTIGWINKSLL-----SGKR 119
R ++G GWI+ S++ SG+R
Sbjct: 143 RLYNGREGWISGSIVTRNVYSGRR 166
>gi|157674090|gb|ABV60161.1| enterotoxin FM [Bacillus cereus]
Length = 397
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAI 122
SA+
Sbjct: 185 GSAV 188
>gi|18309588|ref|NP_561522.1| enterotoxin [Clostridium perfringens str. 13]
gi|18144265|dbj|BAB80312.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 635
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP L + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 480 NEEKPVEPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWY 538
Query: 99 QIRDFDGTIGWINKSLLS 116
+IR F+G +G+ +KS ++
Sbjct: 539 EIR-FNGKVGYASKSYIT 555
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP L + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWI 110
+I+ F+G G++
Sbjct: 457 EIK-FNGKSGYV 467
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|52143465|ref|YP_083364.1| NLP/P60 family protein [Bacillus cereus E33L]
gi|51976934|gb|AAU18484.1| NLP/P60 family protein [Bacillus cereus E33L]
Length = 420
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|118477409|ref|YP_894560.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|196036870|ref|ZP_03104257.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196047052|ref|ZP_03114271.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225863914|ref|YP_002749292.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228914573|ref|ZP_04078182.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228945596|ref|ZP_04107946.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229184189|ref|ZP_04311398.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|118416634|gb|ABK85053.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|195990523|gb|EDX54504.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196022156|gb|EDX60844.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225786426|gb|ACO26643.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228599304|gb|EEK56915.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|228814114|gb|EEM60385.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228844892|gb|EEM89934.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 420
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229172676|ref|ZP_04300234.1| Enterotoxin [Bacillus cereus MM3]
gi|228610808|gb|EEK68072.1| Enterotoxin [Bacillus cereus MM3]
Length = 426
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|228939118|ref|ZP_04101713.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971995|ref|ZP_04132613.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978605|ref|ZP_04138978.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228781101|gb|EEM29306.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228787709|gb|EEM35670.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228820541|gb|EEM66571.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326939695|gb|AEA15591.1| enterotoxin [Bacillus thuringiensis serovar chinensis CT-43]
Length = 430
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|239828486|ref|YP_002951110.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
gi|239808779|gb|ACS25844.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
Length = 474
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V YL++G VEV+++ +W ++ IGW++ + L+ S +N
Sbjct: 111 VVGYLSQGQAVEVIEKENDWEKVVT-PSFIGWVSSAYLTSNDDKKTSMRQTGWVTADSLN 169
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE----GWIKKQKIWGIYP 189
+ +P +Q+ V KV G + I G+W Y + TE GW+ + I + P
Sbjct: 170 VRARPSLQAERVEKVTYGQQVQIMFKQGQW---YQIATENGKIGWVSSEYIAAVSP 222
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S +F + + LA AL + + K+ + A + N R GPG +Y VV + +
Sbjct: 3 SFVFLICMTVILA---ALPTSQAMAAKQT----AVVTAKQVNVRQGPGTLYHVVMK-VDQ 54
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G VV+E W Q+ GW+ + ++ R ++ +R + + P +
Sbjct: 55 GETYRVVREKAGWVQLEIKQNQTGWVAQQYIAYVRKQAMATEDR-------LRVRTVPSL 107
Query: 145 QSIIVAKVEPGVLLTIRECSGEW 167
+V + G + + E +W
Sbjct: 108 NGKVVGYLSQGQAVEVIEKENDW 130
>gi|228907704|ref|ZP_04071560.1| Enterotoxin [Bacillus thuringiensis IBL 200]
gi|228851937|gb|EEM96735.1| Enterotoxin [Bacillus thuringiensis IBL 200]
Length = 430
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|229079160|ref|ZP_04211709.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|229109445|ref|ZP_04239039.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228674012|gb|EEL29262.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228704177|gb|EEL56614.1| Enterotoxin [Bacillus cereus Rock4-2]
Length = 432
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 139 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 196
Query: 119 RSAI 122
SA+
Sbjct: 197 GSAV 200
>gi|229150214|ref|ZP_04278436.1| Enterotoxin [Bacillus cereus m1550]
gi|228633333|gb|EEK89940.1| Enterotoxin [Bacillus cereus m1550]
Length = 431
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|229069530|ref|ZP_04202819.1| Enterotoxin [Bacillus cereus F65185]
gi|229178386|ref|ZP_04305755.1| Enterotoxin [Bacillus cereus 172560W]
gi|229190084|ref|ZP_04317090.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228593413|gb|EEK51226.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228605116|gb|EEK62568.1| Enterotoxin [Bacillus cereus 172560W]
gi|228713669|gb|EEL65555.1| Enterotoxin [Bacillus cereus F65185]
Length = 428
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|206970725|ref|ZP_03231677.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228952357|ref|ZP_04114445.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|229043746|ref|ZP_04191448.1| Enterotoxin [Bacillus cereus AH676]
gi|60202511|gb|AAX14641.1| enterotoxin FM [Bacillus cereus]
gi|206734361|gb|EDZ51531.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228725599|gb|EEL76854.1| Enterotoxin [Bacillus cereus AH676]
gi|228807353|gb|EEM53884.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 426
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|30020092|ref|NP_831723.1| enterotoxin [Bacillus cereus ATCC 14579]
gi|229127388|ref|ZP_04256383.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|29895642|gb|AAP08924.1| Enterotoxin [Bacillus cereus ATCC 14579]
gi|228656070|gb|EEL11913.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
Length = 430
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 194
Query: 119 RSAI 122
SA+
Sbjct: 195 GSAV 198
>gi|228920686|ref|ZP_04084029.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228838987|gb|EEM84285.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 428
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|228964970|ref|ZP_04126072.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228794711|gb|EEM42215.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 430
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|296502574|ref|YP_003664274.1| enterotoxin [Bacillus thuringiensis BMB171]
gi|296323626|gb|ADH06554.1| enterotoxin [Bacillus thuringiensis BMB171]
Length = 430
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 194
Query: 119 RSAI 122
SA+
Sbjct: 195 GSAV 198
>gi|228958266|ref|ZP_04119994.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801425|gb|EEM48314.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 426
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229144597|ref|ZP_04272999.1| Enterotoxin [Bacillus cereus BDRD-ST24]
gi|228638837|gb|EEK95265.1| Enterotoxin [Bacillus cereus BDRD-ST24]
Length = 428
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|228900577|ref|ZP_04064799.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
gi|228859060|gb|EEN03498.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
Length = 430
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229160969|ref|ZP_04288958.1| Enterotoxin [Bacillus cereus R309803]
gi|228622537|gb|EEK79374.1| Enterotoxin [Bacillus cereus R309803]
Length = 428
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229196202|ref|ZP_04322951.1| Enterotoxin [Bacillus cereus m1293]
gi|228587267|gb|EEK45336.1| Enterotoxin [Bacillus cereus m1293]
Length = 422
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|196041886|ref|ZP_03109174.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
gi|196027258|gb|EDX65877.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
Length = 418
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAI 122
SA+
Sbjct: 189 GSAV 192
>gi|218896941|ref|YP_002445352.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
gi|218541564|gb|ACK93958.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
Length = 432
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|218232041|ref|YP_002366676.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
gi|218159998|gb|ACK59990.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
Length = 413
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|206977499|ref|ZP_03238394.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217959460|ref|YP_002338012.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|229138685|ref|ZP_04267267.1| Enterotoxin [Bacillus cereus BDRD-ST26]
gi|206744349|gb|EDZ55761.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217063160|gb|ACJ77410.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|228644804|gb|EEL01054.1| Enterotoxin [Bacillus cereus BDRD-ST26]
Length = 426
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|6224906|gb|AAF06005.1| enterotoxin [Bacillus cereus]
Length = 419
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229029681|ref|ZP_04185756.1| Enterotoxin [Bacillus cereus AH1271]
gi|228731623|gb|EEL82530.1| Enterotoxin [Bacillus cereus AH1271]
Length = 426
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|222095604|ref|YP_002529661.1| nlp/p60 family protein [Bacillus cereus Q1]
gi|221239662|gb|ACM12372.1| NLP/P60 family protein [Bacillus cereus Q1]
Length = 406
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 113 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 170
Query: 119 RSAI 122
SA+
Sbjct: 171 GSAV 174
>gi|157674095|gb|ABV60163.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAI 122
SA+
Sbjct: 189 GSAV 192
>gi|42781106|ref|NP_978353.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
gi|42737027|gb|AAS40961.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
Length = 426
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|6224908|gb|AAF06006.1| enterotoxin [Bacillus cereus]
Length = 431
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 138 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 195
Query: 119 RSAI 122
SA+
Sbjct: 196 GSAV 199
>gi|157674086|gb|ABV60159.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 40.8 bits (94), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 186
Query: 119 RSAI 122
SA+
Sbjct: 187 GSAV 190
>gi|157674093|gb|ABV60162.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 40.8 bits (94), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAI 122
SA+
Sbjct: 185 GSAV 188
>gi|157674088|gb|ABV60160.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 40.8 bits (94), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAI 122
SA+
Sbjct: 185 GSAV 188
>gi|157674079|gb|ABV60156.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 186
Query: 119 RSAI 122
SA+
Sbjct: 187 GSAV 190
>gi|228985083|ref|ZP_04145250.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774570|gb|EEM22969.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 422
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|163939798|ref|YP_001644682.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|229166861|ref|ZP_04294608.1| Enterotoxin [Bacillus cereus AH621]
gi|163861995|gb|ABY43054.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|228616489|gb|EEK73567.1| Enterotoxin [Bacillus cereus AH621]
Length = 430
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|324326018|gb|ADY21278.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 426
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|168211690|ref|ZP_02637315.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
gi|170710343|gb|EDT22525.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
Length = 547
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 45 EKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ E E+KP L + +K + A N R GPG Y V+ T L VE++KE + W +I
Sbjct: 394 DNESNEEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEI 452
Query: 101 RDFDGTIGWINKSLLS 116
+ F+G +G+ +KS ++
Sbjct: 453 K-FNGKVGYASKSYIT 467
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LCNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|157674081|gb|ABV60157.1| enterotoxin FM [Bacillus cereus]
Length = 395
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 125 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 182
Query: 119 RSAI 122
SA+
Sbjct: 183 GSAV 186
>gi|229102590|ref|ZP_04233294.1| Enterotoxin [Bacillus cereus Rock3-28]
gi|228680817|gb|EEL34990.1| Enterotoxin [Bacillus cereus Rock3-28]
Length = 425
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|229132826|ref|ZP_04261671.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228650653|gb|EEL06643.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 434
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|229155568|ref|ZP_04283676.1| Enterotoxin [Bacillus cereus ATCC 4342]
gi|228627886|gb|EEK84605.1| Enterotoxin [Bacillus cereus ATCC 4342]
Length = 422
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|229096497|ref|ZP_04227468.1| Enterotoxin [Bacillus cereus Rock3-29]
gi|228686703|gb|EEL40610.1| Enterotoxin [Bacillus cereus Rock3-29]
Length = 429
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|126739699|ref|ZP_01755391.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
gi|126719345|gb|EBA16055.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
Length = 250
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGT-IGWINKSLLSG 117
I+ASR N R GPG +Y V+ L G V+V+ + W +R G IGW+ SL+S
Sbjct: 189 IRASRVNMRQGPGTIYPVIARLL-NGDEVQVIDDSGTGWLHLRARKGDKIGWVAASLVSR 247
Query: 118 KRS 120
K S
Sbjct: 248 KSS 250
>gi|254466995|ref|ZP_05080406.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
gi|206687903|gb|EDZ48385.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
Length = 212
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFD-GTIGWINKSLLSG 117
I+ASR N R GPG Y V+ T L G V V+++ W +R + G +GWI SL+S
Sbjct: 151 IRASRVNMRQGPGTKYPVL-TRLLAGEEVIVIEDTGTGWLHLRAPEKGVVGWIAASLVSK 209
Query: 118 KR 119
KR
Sbjct: 210 KR 211
>gi|71906254|ref|YP_283841.1| hypothetical protein Daro_0614 [Dechloromonas aromatica RCB]
gi|71845875|gb|AAZ45371.1| Protein of unknown function DUF1058 [Dechloromonas aromatica RCB]
Length = 149
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 81 YLTKG-LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
YL K PVEVV E W ++RD +GT+ W+ +S +R +V+ +P +
Sbjct: 48 YLIKAQTPVEVVVRLEGWFKVRDAEGTLAWVESRNVSERRMLVVT-------SP-RAEIR 99
Query: 140 KKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLD-TEGWIKKQKIWGI 187
+ ++ ++A+++ V + + S W + D G+I+ ++WG+
Sbjct: 100 QADKAEAAVLAELDKWVAVEFVESASPGWAKVRHRDGATGYIRSTQVWGL 149
>gi|229017292|ref|ZP_04174196.1| Enterotoxin [Bacillus cereus AH1273]
gi|229023468|ref|ZP_04179965.1| Enterotoxin [Bacillus cereus AH1272]
gi|228737821|gb|EEL88320.1| Enterotoxin [Bacillus cereus AH1272]
gi|228743993|gb|EEL94091.1| Enterotoxin [Bacillus cereus AH1273]
Length = 449
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|47569982|ref|ZP_00240645.1| enterotoxin [Bacillus cereus G9241]
gi|47553330|gb|EAL11718.1| enterotoxin [Bacillus cereus G9241]
Length = 402
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 113 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEEQDWFKI-NFNGGTGYVSKDFVTKG 170
Query: 119 RSAI 122
SA+
Sbjct: 171 GSAV 174
>gi|229059655|ref|ZP_04197033.1| Enterotoxin [Bacillus cereus AH603]
gi|228719668|gb|EEL71267.1| Enterotoxin [Bacillus cereus AH603]
Length = 425
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI 122
SA+
Sbjct: 191 GSAV 194
>gi|326803465|ref|YP_004321283.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651737|gb|AEA01920.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 408
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-----NKSLLSGKRSAI 122
R GPGI Y + + +G +V++E +W+ I +G GWI N SL + + A
Sbjct: 2 RNGPGITYDI-SQQIDQGSQYQVLEEKHDWKHIILDNGQSGWIPNWLANDSLANNEEEAK 60
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
T +N+Y+ S ++ + I SG+ D GWI +
Sbjct: 61 AGTGFIATVLSDQVNVYQDDSTNSQVIGQANDNEKYNILYQSGDMINIQYKDDIGWIPQN 120
Query: 183 KIWGIYPG 190
+I I PG
Sbjct: 121 QIE-ITPG 127
>gi|217969960|ref|YP_002355194.1| hypothetical protein Tmz1t_1540 [Thauera sp. MZ1T]
gi|217507287|gb|ACK54298.1| protein of unknown function DUF1058 [Thauera sp. MZ1T]
Length = 165
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN---RKTNNPIYINL 138
L G PVE+V + W ++RD G GW+ L +R+ IV+ R+
Sbjct: 66 LRPGTPVEIVVREDGWMRVRDPAGGFGWVEGGALVTRRTVIVTAERAIVRRAAQETAAPA 125
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIWGI 187
++ +++++ +EP S W +++ EG++ ++WG+
Sbjct: 126 FEA--TRNVVLELLEP--------ASEGWARVRHVEGFEGYVHASEVWGL 165
>gi|148658216|ref|YP_001278421.1| NLP/P60 protein [Roseiflexus sp. RS-1]
gi|148570326|gb|ABQ92471.1| NLP/P60 protein [Roseiflexus sp. RS-1]
Length = 532
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLS 116
TI RA R GPG Y V ++ PV+V+ Y +W Q+R+ DG I WI+ +L+
Sbjct: 147 ATIAVERAFLRNGPGTNYDAVGR-ISGATPVQVIGRYGDWFQVRERVDGPIYWISGEVLA 205
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 52 KPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
P P V + A + N R GP Y V + G+ V+++ +Y++W ++R DGT W+
Sbjct: 305 DPNPALVGVIAENSVNLRKGPDSRYDRVGR-IDAGVQVDLIGKYKDWLRVRLPDGTKAWV 363
Query: 111 NKSLLS 116
+ L++
Sbjct: 364 FRDLIT 369
>gi|160882658|ref|ZP_02063661.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
gi|156111973|gb|EDO13718.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
Length = 326
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L Y +LA + A +EI +P+P + + S N R G + + T G+
Sbjct: 6 LLFYCFLATMAASLKAQEI---RPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGM 61
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPD 143
PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KPD
Sbjct: 62 PVKVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPD 120
Query: 144 IQSIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 121 ESSQPVSDVVAGNRLKWEGSKGHF 144
>gi|78043744|ref|YP_361279.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995859|gb|ABB14758.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 618
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KA+ N R GPG Y+V+ T L +G VE ++ +W +++ T GW+ K+ L
Sbjct: 195 VKATSLNLRSGPGTSYSVIKT-LPQGTKVEGLQVSGDWMKVKA-GSTTGWVAKAYL---- 248
Query: 120 SAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
V+ +R I +Y + D + A GV TI SGE FG + +GW
Sbjct: 249 VPYVAETSRGDGLRIIKTVYPQVDPVNVFNGAGFSTGVKATI---SGEKSFGVLEEKDGW 305
Query: 179 IK 180
+
Sbjct: 306 YR 307
>gi|229011289|ref|ZP_04168481.1| Enterotoxin [Bacillus mycoides DSM 2048]
gi|228749945|gb|EEL99778.1| Enterotoxin [Bacillus mycoides DSM 2048]
Length = 436
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDYVTKG 194
Query: 119 RSAI 122
SA+
Sbjct: 195 GSAV 198
>gi|120437653|ref|YP_863339.1| NlpC/P60 family protein [Gramella forsetii KT0803]
gi|117579803|emb|CAL68272.1| NlpC/P60 family protein [Gramella forsetii KT0803]
Length = 407
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K S AN R P +V T T G+P++V K+ W I+ DG +GW++ ++ K
Sbjct: 109 VKISVANLRDEPKHSAQLV-TQATLGMPLKVYKKQGGWYYIQTPDGYLGWVDYGGIANKT 167
Query: 120 SAIVSPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTI 160
S W + + IY+ + ++KPD S V + G +L +
Sbjct: 168 KEEFSEW-KSSEKLIYLKPFGSSHEKPDNNSQSVTDLVAGDILEL 211
>gi|168206724|ref|ZP_02632729.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
gi|170661865|gb|EDT14548.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
Length = 553
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP + + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGT-LCNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+IR F+G +G+ +KS ++
Sbjct: 457 EIR-FNGKVGYASKSYIT 473
Score = 34.3 bits (77), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYVVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|320353987|ref|YP_004195326.1| hypothetical protein Despr_1887 [Desulfobulbus propionicus DSM
2032]
gi|320122489|gb|ADW18035.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+I + N R P + ++ T G P+++ +E NW D+ GW+ K L+S
Sbjct: 31 SIAKDQVNIRSKPSLSSEIIFT-APLGYPIKIEQEANNWSFFHDWQNNRGWVYKPLVSDI 89
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE- 176
+A+V N+ + +S +V+ E G + I G+W GY
Sbjct: 90 ETAVVV--------VDKANIRNASNTRSQVVSTAEQGEIYKILAKKGDWVRLGYYHGGAE 141
Query: 177 -GWIKKQKIWG 186
GWI ++G
Sbjct: 142 VGWIHSDLVFG 152
>gi|237718431|ref|ZP_04548912.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|293371425|ref|ZP_06617856.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
gi|229452364|gb|EEO58155.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|292633622|gb|EFF52180.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
Length = 326
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L Y +LA + A +EI +P+P + + S N R G + + T G+
Sbjct: 6 LLFYCFLATMAASLKAQEI---RPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGM 61
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPD 143
PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KPD
Sbjct: 62 PVKVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPD 120
Query: 144 IQSIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 121 ESSQPVSDVVAGNRLKWEGSKGHF 144
>gi|157674077|gb|ABV60155.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSLLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAI 122
SA+
Sbjct: 189 GSAV 192
>gi|110800117|ref|YP_695040.1| N-acetylmuramoyl-L-alanine amidase [Clostridium perfringens ATCC
13124]
gi|110674764|gb|ABG83751.1| putative enterotoxin, EntD [Clostridium perfringens ATCC 13124]
Length = 553
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP + + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+IR F+G +G+ +KS ++
Sbjct: 457 EIR-FNGKVGYASKSYIT 473
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|226941754|ref|YP_002796828.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
gi|226716681|gb|ACO75819.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
Length = 147
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
+++ PVEV+ NW ++RD G I W++ + LS +R+ IV+
Sbjct: 48 VSRAYPVEVLARQGNWARVRDATGGIAWVDYARLSPQRTVIVT 90
>gi|29346724|ref|NP_810227.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
gi|29338621|gb|AAO76421.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
Length = 328
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
++FY ++A+ K E +P+P + + S N R G + + T G+PV
Sbjct: 6 LFFYCLLVVAVVSLKAQ-EIRPMPADSAYGVVHISVCNMR-DEGKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTYEKPDDD 122
Query: 146 SIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGHF 144
>gi|182625760|ref|ZP_02953528.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
gi|177909022|gb|EDT71504.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
Length = 553
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP L + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVDPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGT-LHNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+I+ F+G +G+ +KS ++
Sbjct: 457 EIK-FNGKVGYASKSYIT 473
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|126732308|ref|ZP_01748108.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
gi|126707177|gb|EBA06243.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
Length = 199
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDG-TIGWINKSLLS 116
T+ SR N R GP + V T L +G VEV+ E + W ++R DG IGW++ S L+
Sbjct: 138 TVTGSRVNLRAGPSTSFDAV-TQLLEGEEVEVLDETPDGWVKLRATDGNNIGWMSGSFLT 196
Query: 117 GK 118
Sbjct: 197 AS 198
>gi|20808951|ref|NP_624122.1| hypothetical protein TTE2606 [Thermoanaerobacter tengcongensis MB4]
gi|20517614|gb|AAM25726.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 723
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ S N R GPG Y ++ T + +G +E + + +W +R DGT+GWI+
Sbjct: 380 VSGSVVNIRTGPGTQYDII-TQVNRGEILEALNKSGDWYNVRLKDGTVGWIS 430
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + R N R GP Y V+ T ++KG ++ + + +W +++ D GWI L+
Sbjct: 165 VVVNGDRVNVRTGPDTKYDVITT-VSKGEVLKALAKLGDWYKVQLKDNKAGWIAGWLVIP 223
Query: 118 KRSAIVSPWN--RKTNNP 133
K A S N ++ N+P
Sbjct: 224 KDQAQQSSQNHSKEENSP 241
>gi|58802526|gb|AAW82450.1| enterotoxin FM [Bacillus mycoides]
Length = 285
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 45 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDYVTKG 102
Query: 119 RSAI 122
SA+
Sbjct: 103 GSAV 106
>gi|299149077|ref|ZP_07042139.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
gi|298513838|gb|EFI37725.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
Length = 326
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L Y +LA + A +EI +P+P + + S N R G + + T G+
Sbjct: 6 LLFYCFLAMMAASLKAQEI---RPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGM 61
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPD 143
PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KPD
Sbjct: 62 PVKVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPD 120
Query: 144 IQSIIVAKVEPGVLLTIRECSGEW 167
S V+ V G L G +
Sbjct: 121 ESSQPVSDVVAGNRLKWEGSKGHF 144
>gi|299822821|ref|ZP_07054707.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
gi|299816350|gb|EFI83588.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
Length = 426
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWNRKTNNPIYINL 138
L KG V V+ + W Q++ + G I WIN S ++ K SA S + T N+
Sbjct: 125 LHKGDQVTVISQQNGWAQVQ-YKGKIAWINSSYITIKESATREKDSSLQQVTVRENATNI 183
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + S I+ KV+ G I G+W
Sbjct: 184 RETAALNSNILEKVDAGESFDIEGVQGDW 212
>gi|169829347|ref|YP_001699505.1| cell-wall amidase lytH [Lysinibacillus sphaericus C3-41]
gi|168993835|gb|ACA41375.1| Probable cell-wall amidase lytH precursor [Lysinibacillus
sphaericus C3-41]
Length = 526
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + +A+ ++ I + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLIV------TIAIPNKNFIQNASADTSDLKVAGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIR--DFDG-TIGWINKSLLSGK--RSAIVSPWNRKTNNPI 134
T L +G P+ + +W Q++ ++G W+ S + K ++S +R
Sbjct: 58 T-LEEGDPLTSIDREGDWIQVKAGSYEGWVASWLTASTSTQKTIDKTVISQVDR------ 110
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWIKKQ 182
+N+ PDI S ++ ++ G + E + EW +N + GW+ K
Sbjct: 111 -LNIRTDPDISSAVLGQLSTGNQANLIEENNEWAKIDWNGQS-GWVSKD 157
>gi|229115471|ref|ZP_04244877.1| Enterotoxin [Bacillus cereus Rock1-3]
gi|228667884|gb|EEL23320.1| Enterotoxin [Bacillus cereus Rock1-3]
Length = 425
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +T + + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTALGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI 122
SA+
Sbjct: 193 GSAV 196
>gi|164687863|ref|ZP_02211891.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
gi|164603138|gb|EDQ96603.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
Length = 375
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+K VT+ S N R GPG Y+ + T + KG + V++ + W ++ +G G
Sbjct: 19 MDKAYADSTVTVNVSALNVRSGPGTDYSKIGT-VYKGSSLTVLETNDMWYHVKLNNGLKG 77
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ + K + + +N + N +N+ P I G + + SG W
Sbjct: 78 WVYSRYVK-KEYSSNTTYNTGSINISAVNVRSGPGNGYSIKKVASYGTKVKLLNKSGGW- 135
Query: 169 FGYNLD----TEGWIKKQKI 184
YN++ T GWI K+ I
Sbjct: 136 --YNVELPSGTNGWIYKKYI 153
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 59 TIKASRANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL- 115
+I S N R GPG Y++ V +Y TK V+++ + W + GT GWI K +
Sbjct: 98 SINISAVNVRSGPGNGYSIKKVASYGTK---VKLLNKSGGWYNVELPSGTNGWIYKKYIN 154
Query: 116 -SG------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
SG +S + N K +N+ P I AK+ G ++ + + S W
Sbjct: 155 TSGHTEDDDNKSDGFNSCNGKVTCKSNLNVRSGPSTSYSIKAKLTHGQVIKLTDKSNGWY 214
Query: 169 -FGYNLDTEGWIKKQKI 184
T GW+K I
Sbjct: 215 KVSLTNGTTGWVKDDYI 231
>gi|126653966|ref|ZP_01725803.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
gi|126589523|gb|EAZ83665.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
Length = 526
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + +A+ ++ I + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLIV------TIAIPNKNFIQNASADTSDLKVSGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIR--DFDG-TIGWINKSLLSGK--RSAIVSPWNRKTNNPI 134
T L +G P+ + +W Q++ ++G W+ S + K ++S +R
Sbjct: 58 T-LDEGDPLTSIAREGDWIQVKAGSYEGWVASWLTTSTSTQKTIDKTVISQVDR------ 110
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWIKKQ 182
+N+ PDI S ++ ++ G + E + EW +N GW+ K
Sbjct: 111 -LNIRTDPDISSAVLGQLSTGNQANLLEENNEWAKIDWN-GLSGWVSKD 157
>gi|284793776|pdb|2KRS|A Chain A, Solution Nmr Structure Of Sh3 Domain From Cpf_0587
(Fragment 415-479) From Clostridium Perfringens.
Northeast Structural Genomics Consortium (Nesg) Target
Cpr74a
Length = 74
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
S N R GPG Y V+ T L VE++KE + W +IR F+G +G+ +KS ++
Sbjct: 9 SALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIR-FNGKVGYASKSYIT 60
>gi|311031526|ref|ZP_07709616.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. m3-13]
Length = 561
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRS---- 120
R GPG ++VV V+ ++E ENW ++ DG GW+ K ++L+ K+
Sbjct: 85 RSGPGTNFSVVGFLHASATSVQYLEENENWVKVHS-DGVEGWVAKEFVTILAKKKEEQQA 143
Query: 121 -----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+ T +N+ +P QS ++ + G + + GEW +N
Sbjct: 144 ETEESTEETEGQSATITTDGLNIRSEPSTQSEVLGTLSSGQQVEVLAIRGEWLNISFN-G 202
Query: 175 TEGWI 179
T GW+
Sbjct: 203 TVGWV 207
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TIK + N R P + V L +G V ++ E NW +I +G GWI L
Sbjct: 235 ATIKVAGLNVRNEP-TLNGKVLEQLPQGTTVSIISERNNWCEIEYDNGKTGWIAGWFL-- 291
Query: 118 KRSAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++S + SP ++++ + N+ P S ++ + + G +I W
Sbjct: 292 EKSGVSSPTPSQSSDGTIVIVDDATNIRSAPSTDSKVILRADEGEEFSIVAVEDNW 347
>gi|302608284|emb|CBW44748.1| conserved hypothetical protein, SH3-like region precursor
[Marinobacter hydrocarbonoclasticus]
Length = 222
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R G G Y ++ L G P+EV++ +N+ ++R GT GW+ LS +
Sbjct: 36 RSGAGTQYRIIENALPSGTPLEVLETGDNYTRVRTPKGTEGWVASQYLSNE 86
>gi|156741201|ref|YP_001431330.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
gi|156232529|gb|ABU57312.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
Length = 532
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLS 116
T+ RA R GPG Y V ++ PV+V+ Y +W Q+R+ DG I WI+ +L+
Sbjct: 147 ATVAVERAFLRNGPGTEYDAVGR-ISGETPVQVIGRYGDWFQVRERVDGPIYWISGEVLA 205
Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ T++ S R GPG Y V T L + VE+ + Y++W I G GW+ L
Sbjct: 229 KIATVRESGLQLRDGPGTNY-VSMTTLQQHTQVELYEIYQDWFHIGAPGGLDGWVKAEFL 287
Query: 116 SGKRSAIVSPWNRKT---NNPIY--------INLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ S + +T NP +NL K PD + + +++ GV + +
Sbjct: 288 NVDPSVVKRLLVAETIPDPNPALVGVIAENSVNLRKGPDSRYDRIGRIDAGVQVDLIGKH 347
Query: 165 GEW 167
+W
Sbjct: 348 KDW 350
>gi|89100796|ref|ZP_01173649.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
gi|89084499|gb|EAR63647.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
Length = 581
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---S 116
I S N R GPG+ Y++V KG ++KE +W Q+ G+ GW+ L +
Sbjct: 36 IADSGVNIRGGPGLSYSIV-KQAAKGDRYPILKESGDWLQLNLGGGSTGWVAGWLAVKEA 94
Query: 117 GKR-SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK+ SA VS T + + + P + ++A + G I E G W
Sbjct: 95 GKKESASVSSGGTVTADGLRVR--SNPGTDASVIAVLNKGQKAGIIEKEGNWVRITGSFG 152
Query: 176 EGWI 179
GW+
Sbjct: 153 NGWV 156
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
E + T+ A R PG +V+ L KG ++++ NW +I G GW
Sbjct: 98 ESASVSSGGTVTADGLRVRSNPGTDASVIAV-LNKGQKAGIIEKEGNWVRITGSFGN-GW 155
Query: 110 INKSLLS-GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
++ ++ G A + T +N+ P Q ++ K++ G ++I +G W
Sbjct: 156 VSADFITEGSSKAEAASAAEGTVTGDSLNVRSAPGTQGTVLGKLQSGDRVSIVSDNGSWT 215
>gi|312112570|ref|YP_003990886.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
gi|311217671|gb|ADP76275.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
Length = 479
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 17/142 (11%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P+LA +E++ V + A N R GPG+ Y + + +G ++++E W
Sbjct: 24 PVLAAKNERQT---------VVVTAKEVNVRQGPGMSYRSLAK-IHQGETYQLIEERAGW 73
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+++ GW+ K+ VS +R + + P IV + G +
Sbjct: 74 VKVQMKRNQAGWVAKTYTKFVLEQAVSQEDR-------LRVRLTPGRDGRIVGHLSKGEV 126
Query: 158 LTIRECSGEWCFGYNLDTEGWI 179
+++ E G+W GW+
Sbjct: 127 VSVLETDGDWSKVVTSSLIGWV 148
>gi|225027153|ref|ZP_03716345.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
gi|224955617|gb|EEG36826.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
Length = 323
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN-----N 132
V T ++ G V NW +R +G G+I KS LSG ++ + ++ T+
Sbjct: 62 VLTSVSAGTSVTKTGRSGNWIAVR-VNGIKGYIYKSYLSGSKNTSTATVSKSTSYRAVIT 120
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL KP S + + G +T+ +G W
Sbjct: 121 ASSVNLRAKPSFSSRVKGSLSAGQAVTVCSTNGSW 155
>gi|187250675|ref|YP_001875157.1| hypothetical protein Emin_0258 [Elusimicrobium minutum Pei191]
gi|186970835|gb|ACC97820.1| Uncharacterized protein conserved in bacteria DUF1058
[Elusimicrobium minutum Pei191]
Length = 157
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W Q++DF+G GWI+ +LLS + + +N+ + P + IV VE G
Sbjct: 63 WVQVKDFEGHTGWIHNTLLSTQIGLSATS---------DVNIRQSPSSNAPIVCTVEKGY 113
Query: 157 LLTIRECSGEWCFGYNLDTE----------GWIKKQKIWG 186
L +G W Y + E GW+ +WG
Sbjct: 114 ALKFISKNGGW---YQVQDEPADKNKGICKGWVYSAYVWG 150
>gi|288869986|ref|ZP_06112473.2| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
gi|288868890|gb|EFD01189.1| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
Length = 555
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 39 ILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ L+ K +F + S+ N R GI ++ T + KG V V++ E W
Sbjct: 145 VFDLAEHKRVFVNNDWSEETKAVADSKGNVREKGGIKSPII-TRVEKGSEVTVLETMEKW 203
Query: 98 RQIRDFDGTIGWINKSLLSGKRS 120
++R DG IG++ L G RS
Sbjct: 204 DKVRTVDGYIGYVEHKRLGGSRS 226
>gi|157674083|gb|ABV60158.1| enterotoxin FM [Bacillus cereus]
Length = 401
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVT 184
>gi|169342324|ref|ZP_02863395.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
gi|169299549|gb|EDS81612.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
Length = 553
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP + + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGT-LHNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+I+ F+G +G+ +KS ++
Sbjct: 457 EIK-FNGKVGYASKSYIT 473
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G G++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYV 385
>gi|153808299|ref|ZP_01960967.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
gi|149129202|gb|EDM20418.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
Length = 336
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ + +S E +P+P + + S N R G + + T G+PV
Sbjct: 13 ILFFCCFLAVVSVTLNAQEIRPMPADSAYGVVHISVCNLR-DEGKFTSGMSTQALLGMPV 71
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ + WNR Y Y+KPD +
Sbjct: 72 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYNEWNRAEKIVVTAHYGFTYEKPDEK 130
Query: 146 SIIVAKVEPG 155
S V+ V G
Sbjct: 131 SQTVSDVVAG 140
>gi|295400753|ref|ZP_06810730.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977334|gb|EFG52935.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 479
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 17/142 (11%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P+LA +E++ V + A N R GPG+ Y + + +G ++++E W
Sbjct: 24 PVLAAKNERQT---------VVVTAKEVNVRQGPGMSYRSLAK-VHQGETYQLIEERAGW 73
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+++ GW+ K+ VS +R + + P IV + G +
Sbjct: 74 VKVQMKRNQAGWVAKTYTKLVLEQAVSQEDR-------LRVRLTPGRDGRIVGHLSKGEV 126
Query: 158 LTIRECSGEWCFGYNLDTEGWI 179
+++ E G+W GW+
Sbjct: 127 VSVLETDGDWSKVVTSSLIGWV 148
>gi|119899103|ref|YP_934316.1| hypothetical protein azo2813 [Azoarcus sp. BH72]
gi|119671516|emb|CAL95429.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 148
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ G PVEVV + W ++RD G + WI + L+ +R+ IV+ + ++
Sbjct: 49 IGAGTPVEVVVSLDKWVKVRDPGGALTWIERRALAERRTVIVT--------AARAAVRQQ 100
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD-TEGWIKKQKIWGI 187
P + +V + V+L + W + D G+++ ++WG+
Sbjct: 101 PAGDAPVVFEAAKDVVLEHAAAPADGWVRVRHPDGASGFVRVTEVWGL 148
>gi|229084945|ref|ZP_04217197.1| Enterotoxin [Bacillus cereus Rock3-44]
gi|228698261|gb|EEL50994.1| Enterotoxin [Bacillus cereus Rock3-44]
Length = 434
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I + +G G+I+K ++
Sbjct: 136 TVNVSSLNVRTGPSASHTVLGS-VNKGQTVQVVGEVQDWFKI-NHNGGTGYISKDFVTKG 193
Query: 119 RSAIVSPWNR-KTNNPIYIN-------------LYKKPDIQSIIVAKVEPGVLLTIRECS 164
+A+ + + TNN I + P + ++ V G L +
Sbjct: 194 GTAVSNQTEKPATNNNATIQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTTLQVTGAE 253
Query: 165 GEW 167
W
Sbjct: 254 NGW 256
>gi|307265072|ref|ZP_07546632.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919870|gb|EFN50084.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 656
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
LP + + A+ N R GPG Y ++ T + G + V+ + +W + + +GT+GWI
Sbjct: 303 LPSSLMVNANVVNIRTGPGTQYDII-TQVNNGDILSVIDKSGDWYKAKLQNGTVGWI 358
>gi|126729269|ref|ZP_01745083.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
gi|126710259|gb|EBA09311.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
Length = 274
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+A N R GPG + V+ T +T+G V V+ + + W IR DG G+ + LS R
Sbjct: 163 QAGALNLRDGPGTGFPVIDT-MTQGSSVRVLDDSQTWYLIRHEDGQTGYAHSKYLSQTRQ 221
Query: 121 AIV 123
+
Sbjct: 222 PLA 224
>gi|68075941|ref|XP_679890.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500729|emb|CAH95131.1| conserved hypothetical protein [Plasmodium berghei]
Length = 808
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYI---NLYKKPDIQSIIVA-KVEPGVLLTIRECSGE--- 166
L SG + WN K NN +YI NLY I +I V K P +LL + C
Sbjct: 609 LFSGSNDKNIFVWNLKNNNCLYILKDNLYT---INAIDVNLKKFPKILL-VSVCEDSSLK 664
Query: 167 -WCFGYNLDT-EGWIKKQKIWGIYPGEVFK 194
W F +NLD + KK+KI IY EV K
Sbjct: 665 LWNFSFNLDNLKDNKKKRKIDQIYDNEVIK 694
>gi|70937837|ref|XP_739673.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516843|emb|CAH78275.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 472
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYI---NLYKKPDIQSIIVA-KVEPGVLLTIRECSGE--- 166
L SG + WN K NN +YI NLY I +I V K P +LL + C
Sbjct: 343 LFSGSNDKNIFVWNLKNNNCLYILKDNLYT---INAIDVNLKKFPKILL-VSVCEDSSLK 398
Query: 167 -WCFGYNLDT-EGWIKKQKIWGIYPGEVFK 194
W F +NLD + KK+KI IY EV K
Sbjct: 399 LWNFSFNLDNLKDNKKKRKIDQIYDNEVVK 428
>gi|168214795|ref|ZP_02640420.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
gi|170713760|gb|EDT25942.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
Length = 553
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 43 SHEKEIFEKKP---LPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ EK + +KP + + +K + A N R GPG Y V+ T L VE++KE + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGT-LHNNDKVEIIKEVDGWY 456
Query: 99 QIRDFDGTIGWINKSLLS 116
+I+ F+G +G+ +KS ++
Sbjct: 457 KIK-FNGKVGYASKSYIT 473
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
S N R GPG Y V+ T L VE++KE + W +I+ F+G IG++
Sbjct: 340 SALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKIGYV 385
>gi|152975287|ref|YP_001374804.1| NLP/P60 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024039|gb|ABS21809.1| NLP/P60 protein [Bacillus cytotoxicus NVH 391-98]
Length = 418
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W ++ +++G G+I+K ++
Sbjct: 132 TVNVSSLNVRTGPSTSHTVLGS-VHKGKVVQVVGEVQDWFKV-NYNGGTGYISKDFVTKG 189
Query: 119 RSAIVSPWNR-KTNNPIYI 136
+A+ S + NN + +
Sbjct: 190 GTAVSSQTEKPAANNSVAL 208
>gi|114330674|ref|YP_746896.1| hypothetical protein Neut_0659 [Nitrosomonas eutropha C91]
gi|114307688|gb|ABI58931.1| protein of unknown function DUF1058 [Nitrosomonas eutropha C91]
Length = 159
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LP+EVV + W ++RD+ G + W+ LS KR IV N ++Y+ PD
Sbjct: 64 LPLEVVVKVVGWVKVRDYHGYLAWVEDKNLSPKRFVIV--------NASVGSVYQSPDQN 115
Query: 146 SIIVAKVEPGVLLT-IRECSGEWCFGYNLDTE-GWIKKQKIWGI 187
S +V + V+L + + W + D + G+I+ ++WG+
Sbjct: 116 SSLVFQARQDVVLEWLGAAANGWVKVKHQDGQVGYIRTDQVWGV 159
>gi|88858388|ref|ZP_01133030.1| hypothetical protein PTD2_13399 [Pseudoalteromonas tunicata D2]
gi|88820005|gb|EAR29818.1| hypothetical protein PTD2_13399 [Pseudoalteromonas tunicata D2]
Length = 202
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
G G + +V + + G P+E++ E + + Q++D G GW+++ +S K V N K
Sbjct: 49 GAGKNFRIVGS-INAGSPLELIDEQDGYAQVKDDKGRTGWVDQRFVSKKSGLAVENQNLK 107
>gi|159900539|ref|YP_001546786.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
gi|159893578|gb|ABX06658.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
Length = 539
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
A R N R GPG Y + + G ++++ ++E W +IR DG + W+ + ++S
Sbjct: 333 ADRTNLREGPGTAYEKIVK-VNAGERLQLIAKHEVWVKIRQSDGEVAWVAREVVS 386
>gi|288870484|ref|ZP_06114247.2| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
gi|288867028|gb|EFC99326.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
Length = 688
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIR----DFD 104
+ R T+ AS N R GPG Y++V T LT G V V+ E W QIR
Sbjct: 37 MERSATVNASSLNVRSGPGTTYSIV-TKLTSGAAVTVIDEKTASDGALWYQIRVKGSGGT 95
Query: 105 GTIGWINKSLL 115
T G+++KS L
Sbjct: 96 ETTGYVSKSYL 106
>gi|260892339|ref|YP_003238436.1| NLP/P60 protein [Ammonifex degensii KC4]
gi|260864480|gb|ACX51586.1| NLP/P60 protein [Ammonifex degensii KC4]
Length = 245
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRKTNNPIYINL 138
G PV V++ +NW ++R DG++GW+ + L+ G+ + ++ P + + +Y+
Sbjct: 27 GEPVLVLERRKNWCRVRVLDGSVGWVQQVALTTPVLAGGEPALVIKPKAKLDSFALYL-- 84
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIW 185
G + RE WC ++ EGW++ + +W
Sbjct: 85 ----------------GTAVWTRERREGWCRVFSPSGHEGWVEAEALW 116
>gi|226314188|ref|YP_002774084.1| hypothetical protein BBR47_46030 [Brevibacillus brevis NBRC 100599]
gi|226097138|dbj|BAH45580.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 612
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + + N R PG +V T L K + + K+ ++W Q++ +G GWIN +
Sbjct: 62 VEVAVDQLNIRSEPGTTTQIVAT-LKKATRLPITKQQKDWTQVKLPNGNTGWINNKYV-- 118
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWC-FGYNLDT 175
+ V +N +N+ +P+ + I+ ++ GV L +R+ GEW +
Sbjct: 119 -KMIEVPQIKYVKSNVDMLNVRAEPNPTAQILQIIDNNGVFLQMRK-QGEWAQIKLSDQK 176
Query: 176 EGWIK 180
GW+K
Sbjct: 177 NGWVK 181
>gi|163786705|ref|ZP_02181153.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
gi|159878565|gb|EDP72621.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
Length = 252
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ ++ +KE +KK P V + SR S + L +G V+V++ YE+W++
Sbjct: 174 VVMAFQKEGLDKKDNPAIVFAQESRVKSEANQQ---SEEVFRLHEGTKVQVLETYEDWKK 230
Query: 100 IRDFDGTIGWI 110
I+ D + GW+
Sbjct: 231 IQLSDNSTGWV 241
>gi|253573081|ref|ZP_04850473.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
gi|251837338|gb|EES65437.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
Length = 328
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
++FY ++A+ K E +P+P + + S N R G + + T G+PV
Sbjct: 6 LFFYCLLVVAVVSLKAQ-EIRPMPADSAYGVVHISVCNMR-DEGKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR Y Y+KP+
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVVTPMSKEQYDEWNRAEKIVVTSHYGFTYEKPNDD 122
Query: 146 SIIVAKVEPG 155
S V+ V G
Sbjct: 123 SQTVSDVVAG 132
>gi|226313519|ref|YP_002773413.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226096467|dbj|BAH44909.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 370
Score = 37.4 bits (85), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A R GP + +V + L +G V+++K+ +W Q R +G GW++ + +
Sbjct: 116 TVLADSLRMRKGPSTSHEIVLS-LPRGTRVDILKKQGDWIQARTSNGQTGWVSATYIGDA 174
Query: 119 RSAIVSPWNRKTNNP 133
+ +P + T +P
Sbjct: 175 KVNANAPVTKSTKSP 189
>gi|227510274|ref|ZP_03940323.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227524425|ref|ZP_03954474.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227088384|gb|EEI23696.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227189926|gb|EEI69993.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 280
Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
VT+K ++ N R GP + Y+V T + +G ++V+ NW ++ TIGW+
Sbjct: 33 VTVKVNQLNIRTGPSVTYSVKAT-VKQGAQLQVISRKNNWIKVIYKHKTIGWV 84
>gi|227513281|ref|ZP_03943330.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
gi|227083482|gb|EEI18794.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
Length = 280
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
VT+K ++ N R GP + Y+V T + +G ++V+ NW ++ TIGW+
Sbjct: 33 VTVKVNQLNIRTGPSVTYSVKAT-VKQGAQLQVISRKNNWIKVIYKHKTIGWV 84
>gi|291615066|ref|YP_003525223.1| hypothetical protein Slit_2611 [Sideroxydans lithotrophicus ES-1]
gi|291585178|gb|ADE12836.1| protein of unknown function DUF1058 [Sideroxydans lithotrophicus
ES-1]
Length = 144
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
T+ LP+E V + NW ++RD G + WI K LS KR +V+ P+ + + P
Sbjct: 46 TRYLPLEEVVDLANWVKVRDSSGKLYWIEKRNLSNKRYVMVTV-------PLAV-VRSDP 97
Query: 143 DIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD-TEGWIKKQKIWG 186
S +V K + L +G W + D + G++K +WG
Sbjct: 98 TENSQVVFKAAQQLGLEWLANTGTGWIKVRHADGSVGYLKSTDVWG 143
>gi|134300528|ref|YP_001114024.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
gi|134053228|gb|ABO51199.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
Length = 616
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 52 KPLP--RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
KP P + V I + N R GPG ++V +++G+ + ++ W Q+R +G+ W
Sbjct: 196 KPAPAGQVVVINSDNLNLRSGPGTSHSVA-GQVSRGIRLPIISRSGQWLQVRQANGSTAW 254
Query: 110 INKSLLS 116
+ L+S
Sbjct: 255 VAGWLVS 261
>gi|223698233|gb|ACN18729.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698272|gb|ACN18755.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698275|gb|ACN18757.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698284|gb|ACN18763.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698290|gb|ACN18767.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698308|gb|ACN18779.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698446|gb|ACN18871.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G LT+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|159900897|ref|YP_001547144.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893936|gb|ABX07016.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 556
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 14/158 (8%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
I AL + I P + I N R GPG Y + L V ++ Y+ W
Sbjct: 230 IDALPDAQNIPTPPPA-KVGKITQDNLNLRDGPGTDY-ISMKKLGIDSQVSLLARYQGWY 287
Query: 99 QIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIY--------INLYKKPDIQSI 147
QI +G +GW++ L +G I + + NP INL P +
Sbjct: 288 QIETGEGNVGWVSAEFLNLEAGVAERIAEAESIPSANPDLVGWATDEGINLRSGPSTKFD 347
Query: 148 IVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWIKKQKI 184
+ K+ G LT+ EW T+GWI + +
Sbjct: 348 SLGKLSKGAELTLLARYKEWVKVQTAKGTKGWISQDLV 385
>gi|147677121|ref|YP_001211336.1| hypothetical protein PTH_0786 [Pelotomaculum thermopropionicum SI]
gi|146273218|dbj|BAF58967.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 587
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I N R GPG Y VV +G V++E W ++R G GW+ L+S
Sbjct: 104 VLINGDLVNIRSGPGTGYGVVAQ-AGRGERFPVLEESAGWYKVRLGTGAAGWVAGWLVSL 162
Query: 118 KRSAI-VSP-------------WNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ SA+ V+P + KT +N+ P S I+ + G L+I
Sbjct: 163 ETSAVPVAPVIPPSSPGAGGAAADGKTAVVTASVLNVRSGPGTSSGIIGQAVQGDSLSIL 222
Query: 162 ECSGEW 167
SG+W
Sbjct: 223 GQSGDW 228
>gi|254829720|ref|ZP_05234375.1| hypothetical protein Lmon1_00125 [Listeria monocytogenes 10403S]
Length = 427
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G LT+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|298386623|ref|ZP_06996179.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
gi|298261000|gb|EFI03868.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
Length = 328
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKK 141
G+PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+K
Sbjct: 60 GMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEQYDEWNRAEKIVVTSHYGFTYEK 118
Query: 142 PDIQSIIVAKVEPG 155
PD S V+ V G
Sbjct: 119 PDDDSQTVSDVVAG 132
>gi|228991863|ref|ZP_04151799.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
gi|228767592|gb|EEM16219.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
Length = 382
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PV +++ +W ++ + IG+I KS LS + + N+ N +NL +P IQS
Sbjct: 69 PVTILETTRDWYKV-NAQNKIGYIQKSNLS--LAKLNQQRNQHIVNASALNLRSEPSIQS 125
Query: 147 IIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQ 182
I+ + G ++++E +W YN G++KK+
Sbjct: 126 SILDVLPNGTFISVQETLNDWYLISYNGKI-GYVKKE 161
>gi|228997979|ref|ZP_04157580.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
gi|229005530|ref|ZP_04163242.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228755717|gb|EEM05050.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228761712|gb|EEM10657.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
Length = 382
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PV +++ +W ++ + IG+I KS LS + + N+ N +NL +P IQS
Sbjct: 69 PVTILETTRDWYKV-NAQNKIGYIQKSNLS--LTKLNQQRNQHIVNASALNLRSEPSIQS 125
Query: 147 IIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQ 182
I+ + G ++++E +W YN G++KK+
Sbjct: 126 SILDVLPNGTFISVQETLNDWYLISYNGKI-GYVKKE 161
>gi|329767413|ref|ZP_08258938.1| hypothetical protein HMPREF0428_00635 [Gemella haemolysans M341]
gi|328836102|gb|EGF85793.1| hypothetical protein HMPREF0428_00635 [Gemella haemolysans M341]
Length = 258
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
FE P+P F +K + I +V+ L E K+Y N+ DF+ G
Sbjct: 170 FENYPIPNFSMVKGDEKSVSIAAA---SVMAKVYRDNLMKEYAKKYPNY----DFENNAG 222
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPI 134
+ K L G + V+P +R+ PI
Sbjct: 223 YGTKKHLEGLKEYGVTPIHRRDFEPI 248
>gi|120554798|ref|YP_959149.1| SH3 type 3 domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324647|gb|ABM18962.1| SH3, type 3 domain protein [Marinobacter aquaeolei VT8]
Length = 222
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R G G Y ++ + G P+EV++ E++ ++R GT GW++ LS +
Sbjct: 36 RSGAGSQYRIIENAVPSGTPLEVLETGESYTRVRTPKGTEGWVSSQYLSNE 86
>gi|224368254|ref|YP_002602417.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
gi|223690970|gb|ACN14253.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
Length = 204
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
R GPG+ + ++ L G +E+++ + W +R+ DG GW+
Sbjct: 38 RTGPGVEHKIIA-MLESGDNLELIESGDGWSHVRNVDGKDGWV 79
>gi|289434801|ref|YP_003464673.1| hypothetical protein lse_1436 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171045|emb|CBH27587.1| unnamed protein product [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 427
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYDV-TSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S N+ +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVNSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQDGWA 141
>gi|313633168|gb|EFS00052.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL N1-067]
Length = 427
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYDV-TSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S N+ +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVNSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQDGWA 141
>gi|332974779|gb|EGK11695.1| ErfK/YbiS/YcfS/YnhG family protein [Desmospora sp. 8437]
Length = 317
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI A+RAN R P + TVV KG + + W +++ G ++++S+
Sbjct: 190 VTITATRANLRSQPSLTATVV-EQSGKGNRLTLTGTVGEWYRVKRTHGKTAYVHQSVSRK 248
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S++ P + T N+ K P + ++ +V G L G W
Sbjct: 249 GGSSLHPPKGKVTVTARLANIRKAPSMSGKVLQRVVRGKQLKATGKKGNW 298
>gi|313637737|gb|EFS03098.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL S4-171]
Length = 352
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYDV-TSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S N+ +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVNSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQDGWA 141
>gi|22777706|dbj|BAC13978.1| N-acetylmuramoyl-L-alanine amidase (partial) [Oceanobacillus
iheyensis HTE831]
Length = 346
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+FE+ + + R GPG Y + + G ++++ +W +I D++G
Sbjct: 19 VFEQSVNADTAIVDGDGVHVRSGPGSEYDSIGN-VNNGQSYPLLQQQTDWVEI-DYNGES 76
Query: 108 GWINKSLLSGKR-SAIVSPWNRKTNNPIYIN--LYKKPDIQSIIVAKVEPGVLLTI 160
GW+++ ++ +R + + ++ + +Y N L P + I+A V+ G L I
Sbjct: 77 GWVSQEYINIERVEQEYAEIDSESVDTVYNNTHLRSGPSVNDAIIAYVDQGTTLAI 132
>gi|168070201|ref|XP_001786728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660617|gb|EDQ48458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 289
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP + +++ T K + + V+ +W Q++ +G GW+ L++ ++
Sbjct: 6 VSVDKLNVRSGPSLQDSIITTLPVKTV-LPVLSTKNDWIQVKLPNGQSGWVANYLVTQQQ 64
Query: 120 S-AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEG 177
+ A V+ T+ +N+ P +V + PG +I + +G+W + T+G
Sbjct: 65 TPASVAQIESTTDK---LNVRSGPGQTYSVVQTINPGTRYSIVQKNGDWIQIQLSGQTKG 121
Query: 178 WI 179
W+
Sbjct: 122 WV 123
>gi|218782161|ref|YP_002433479.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218763545|gb|ACL06011.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 217
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
N R G G+ Y ++ L G VE++++ + W +IR DG GW+ +L+ +
Sbjct: 33 NMRSGKGVDYRIIA-MLDTGQTVELLEQSDGWAKIRLGDGKEGWVLSRMLTDQ 84
>gi|112961525|gb|ABI28423.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|28378624|ref|NP_785516.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254556839|ref|YP_003063256.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300768152|ref|ZP_07078057.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180780|ref|YP_003924908.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|28271460|emb|CAD64365.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254045766|gb|ACT62559.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300494216|gb|EFK29379.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046271|gb|ADN98814.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 282
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
T+ + N R GPG+ Y + +KG V ++K NW +R D GWI
Sbjct: 34 ATVNIANVNIRSGPGMSYAIEDA-TSKGTKVHIMKRKNNWLYVRYADHKFGWI 85
>gi|313618811|gb|EFR90702.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL S4-378]
Length = 332
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN +
Sbjct: 91 TDVSAASNSIAIVSSDGGLNVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKS- 149
Query: 177 GWIKKQ 182
W+ Q
Sbjct: 150 AWVSSQ 155
>gi|212638573|ref|YP_002315093.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
gi|212560053|gb|ACJ33108.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
Length = 398
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+++ +KK + + V +A R GPG Y ++ Y+ + E+W +R +
Sbjct: 62 QNEQMEKKKQIQQLVVCQADGLRLRKGPGTTYAIIG-YVNRNEKGTATVIQEDWMYVR-W 119
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK------PDIQSIIVAKVEPGVL 157
DG GW+++S ++ + + LY P QS ++ K + G
Sbjct: 120 DGKEGWVHRSYVANVEKNEQNNEQNNEQHTYVQMLYDNTNIRSAPSTQSPVITKAKQGDQ 179
Query: 158 LTIRECSGEW 167
++ G+W
Sbjct: 180 FSVIRKEGQW 189
>gi|112961390|gb|ABI28333.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|112959319|gb|ABI27183.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959322|gb|ABI27185.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959325|gb|ABI27187.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959328|gb|ABI27189.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959331|gb|ABI27191.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959337|gb|ABI27195.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959340|gb|ABI27197.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959343|gb|ABI27199.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959346|gb|ABI27201.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 354
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|112959229|gb|ABI27123.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959232|gb|ABI27125.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959235|gb|ABI27127.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959238|gb|ABI27129.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959241|gb|ABI27131.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959244|gb|ABI27133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959247|gb|ABI27135.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959250|gb|ABI27137.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959253|gb|ABI27139.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959256|gb|ABI27141.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959259|gb|ABI27143.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959262|gb|ABI27145.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959265|gb|ABI27147.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959268|gb|ABI27149.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959271|gb|ABI27151.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959274|gb|ABI27153.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959277|gb|ABI27155.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959280|gb|ABI27157.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959283|gb|ABI27159.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959286|gb|ABI27161.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959289|gb|ABI27163.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959292|gb|ABI27165.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959295|gb|ABI27167.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959298|gb|ABI27169.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959301|gb|ABI27171.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959304|gb|ABI27173.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959307|gb|ABI27175.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959310|gb|ABI27177.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959313|gb|ABI27179.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959316|gb|ABI27181.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959349|gb|ABI27203.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959352|gb|ABI27205.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959355|gb|ABI27207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959358|gb|ABI27209.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959361|gb|ABI27211.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959364|gb|ABI27213.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959367|gb|ABI27215.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959370|gb|ABI27217.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959373|gb|ABI27219.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959376|gb|ABI27221.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959379|gb|ABI27223.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959382|gb|ABI27225.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959385|gb|ABI27227.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959388|gb|ABI27229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959391|gb|ABI27231.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959394|gb|ABI27233.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959397|gb|ABI27235.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959400|gb|ABI27237.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959403|gb|ABI27239.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959406|gb|ABI27241.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959409|gb|ABI27243.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959412|gb|ABI27245.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 355
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|112961393|gb|ABI28335.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 22 LQNSLIF--TLAIYFYLAPI---LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++N IF ++I A I +A+++E + +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANENSVV----------VKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + K + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 -VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWI 179
N+ +KP S + + G +T+ W YN T W+
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTSAWV 152
>gi|295705177|ref|YP_003598252.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
gi|294802836|gb|ADF39902.1| N-acetylmuramoyl-L-alanine amidase cwlB (Cell wall hydrolase)
(Autolysin) [Bacillus megaterium DSM 319]
Length = 429
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 17/137 (12%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+ I AS N R ++V T L + V VVKE +W Q++ G GW+
Sbjct: 101 SASKSAVINASSLNVRSSASTSASIV-TNLPRNSKVTVVKESGSWSQVKTASGQTGWVAS 159
Query: 113 SLL---SGKRSAIVSPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L SG+ S +T I I NL +P + + I+ + G +
Sbjct: 160 QYLQTGSGQSS--------QTAQSIQITKASNLRTQPSLSAGIIRVAKAGERFKKVNETN 211
Query: 166 EWC-FGYNLDTEGWIKK 181
+W Y+ W+ K
Sbjct: 212 DWVQIQYSASQTAWVSK 228
>gi|254852145|ref|ZP_05241493.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
gi|258605448|gb|EEW18056.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
Length = 436
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|112961342|gb|ABI28301.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961345|gb|ABI28303.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961348|gb|ABI28305.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961351|gb|ABI28307.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961354|gb|ABI28309.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961357|gb|ABI28311.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961360|gb|ABI28313.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961363|gb|ABI28315.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961366|gb|ABI28317.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961369|gb|ABI28319.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961372|gb|ABI28321.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961375|gb|ABI28323.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961378|gb|ABI28325.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961381|gb|ABI28327.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961384|gb|ABI28329.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961387|gb|ABI28331.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961396|gb|ABI28337.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961399|gb|ABI28339.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961402|gb|ABI28341.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961405|gb|ABI28343.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961408|gb|ABI28345.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961411|gb|ABI28347.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961414|gb|ABI28349.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961417|gb|ABI28351.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961420|gb|ABI28353.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961423|gb|ABI28355.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961426|gb|ABI28357.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961429|gb|ABI28359.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961432|gb|ABI28361.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961435|gb|ABI28363.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961438|gb|ABI28365.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961441|gb|ABI28367.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961444|gb|ABI28369.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961447|gb|ABI28371.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961450|gb|ABI28373.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961453|gb|ABI28375.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961456|gb|ABI28377.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961459|gb|ABI28379.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961462|gb|ABI28381.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961465|gb|ABI28383.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961468|gb|ABI28385.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961471|gb|ABI28387.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961474|gb|ABI28389.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961477|gb|ABI28391.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961480|gb|ABI28393.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961483|gb|ABI28395.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961486|gb|ABI28397.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961489|gb|ABI28399.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961492|gb|ABI28401.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961495|gb|ABI28403.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961498|gb|ABI28405.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961501|gb|ABI28407.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961504|gb|ABI28409.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961507|gb|ABI28411.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961510|gb|ABI28413.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961513|gb|ABI28415.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961516|gb|ABI28417.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961519|gb|ABI28419.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961522|gb|ABI28421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961528|gb|ABI28425.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|254994484|ref|ZP_05276674.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-064]
Length = 288
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|321160005|pdb|3PVQ|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
gi|321160006|pdb|3PVQ|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
Length = 308
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKK 141
G PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+K
Sbjct: 40 GXPVKVL-QYTGWYEIQTPDDYTGWVHRXVITPXSKEKYDEWNRAEKIVVTSHYGFTYEK 98
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEW 167
PD S V+ V G L G +
Sbjct: 99 PDDDSQTVSDVVAGNRLKWEGSKGHF 124
>gi|112959334|gb|ABI27193.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 352
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|160937715|ref|ZP_02085075.1| hypothetical protein CLOBOL_02608 [Clostridium bolteae ATCC
BAA-613]
gi|158439360|gb|EDP17112.1| hypothetical protein CLOBOL_02608 [Clostridium bolteae ATCC
BAA-613]
Length = 589
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 20 KILQNSLIFTLAIYFYLAPI----LALSHEKEIF-EKKPLPRFVTIKASRANSRIGPGIM 74
K+ Q+ + +L + I A S K +F + P + R+ G+
Sbjct: 153 KVTQDGMYLSLGVVVNYTDIRTQAFATSQIKRVFIDTSWQPYDTAVLKKTGQVRVKGGVK 212
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-NKSLLSGKRSAIVSPWNRKTNNP 133
++ T G V+V++ + W ++R DG IG++ N+ L +G++ A VS + P
Sbjct: 213 SQII-TEAAAGETVDVLETMDKWSRVRTADGYIGYVENRKLEAGEQIAPVSTFEA----P 267
Query: 134 IYINL 138
+Y ++
Sbjct: 268 VYTSI 272
>gi|46907749|ref|YP_014138.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes serotype
4b str. F2365]
gi|47094424|ref|ZP_00232110.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|226224122|ref|YP_002758229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
Clip81459]
gi|254824420|ref|ZP_05229421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|254931456|ref|ZP_05264815.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|255521239|ref|ZP_05388476.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-175]
gi|300764812|ref|ZP_07074802.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|46881018|gb|AAT04315.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47017199|gb|EAL08046.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|225876584|emb|CAS05293.1| Putative N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293583008|gb|EFF95040.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|293593655|gb|EFG01416.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|300514488|gb|EFK41545.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|328465558|gb|EGF36787.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 1816]
gi|328474883|gb|EGF45683.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 220]
gi|332311963|gb|EGJ25058.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes str.
Scott A]
Length = 427
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|16800624|ref|NP_470892.1| hypothetical protein lin1556 [Listeria innocua Clip11262]
gi|16414043|emb|CAC96787.1| lin1556 [Listeria innocua Clip11262]
Length = 427
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN +
Sbjct: 91 TDVSAASNSIAIVSSDGGLNVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKS- 149
Query: 177 GWIKKQ 182
W+ Q
Sbjct: 150 AWVSSQ 155
>gi|303239328|ref|ZP_07325856.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
gi|302593114|gb|EFL62834.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
Length = 358
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
I N R GPG Y V+C + KG VE+++ W I+ G GW+
Sbjct: 158 IDGDDVNVREGPGKNYGVICQ-VDKGEKVEILESAPEWYHIKTSSGVNGWV 207
>gi|82915496|ref|XP_729097.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23485949|gb|EAA20662.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1191
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYI---NLYKKPDIQSIIVA-KVEPGVLLTIRECSGE--- 166
L SG + WN K N+ +YI NLY I +I V K P +LL + C
Sbjct: 609 LFSGSNDKNIFVWNLKNNSCLYILKDNLYT---INAIDVNLKKFPKILL-VSVCEDSSLK 664
Query: 167 -WCFGYNLDT-EGWIKKQKIWGIYPGEVFK 194
W F +NLD + KK+KI IY EV K
Sbjct: 665 LWNFSFNLDNLKDNKKKRKIDQIYDNEVVK 694
>gi|255100149|ref|ZP_05329126.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
gi|255306039|ref|ZP_05350211.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
Length = 424
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y+++ L G VE+ + W +++ GTIGW++ S +S
Sbjct: 212 NVRSGPGTSYSIIGK-LNGGDVVELKAKSNGWYKVKLSSGTIGWVSASYIS 261
>gi|126698729|ref|YP_001087626.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|115250166|emb|CAJ67987.1| putative SH3-domain protein [Clostridium difficile]
Length = 431
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y+++ L G VE+ + W +++ GTIGW++ S +S
Sbjct: 219 NVRSGPGTSYSIIGK-LNGGDVVELKAKSNGWYKVKLSSGTIGWVSASYIS 268
>gi|254974669|ref|ZP_05271141.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255092057|ref|ZP_05321535.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255313794|ref|ZP_05355377.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
gi|255516475|ref|ZP_05384151.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255649575|ref|ZP_05396477.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|306519701|ref|ZP_07406048.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
Length = 424
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y+++ L G VE+ + W +++ GTIGW++ S +S
Sbjct: 212 NVRSGPGTSYSIIGK-LNGGDVVELKSKNNGWYKVKLSSGTIGWVSASYIS 261
>gi|260682739|ref|YP_003214024.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260686337|ref|YP_003217470.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|260208902|emb|CBA61884.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260212353|emb|CBE03160.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 427
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y+++ L G VE+ + W +++ GTIGW++ S +S
Sbjct: 215 NVRSGPGTSYSIIGK-LNGGDVVELKSKNNGWYKVKLSSGTIGWVSASYIS 264
>gi|223698305|gb|ACN18777.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|223698266|gb|ACN18751.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698269|gb|ACN18753.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698293|gb|ACN18769.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698296|gb|ACN18771.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698341|gb|ACN18801.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698377|gb|ACN18825.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698380|gb|ACN18827.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698419|gb|ACN18853.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698449|gb|ACN18873.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698452|gb|ACN18875.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698455|gb|ACN18877.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698485|gb|ACN18897.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698518|gb|ACN18919.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698548|gb|ACN18939.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698551|gb|ACN18941.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698554|gb|ACN18943.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698557|gb|ACN18945.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698560|gb|ACN18947.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698563|gb|ACN18949.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698566|gb|ACN18951.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|223698230|gb|ACN18727.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698236|gb|ACN18731.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698239|gb|ACN18733.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698242|gb|ACN18735.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698248|gb|ACN18739.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698251|gb|ACN18741.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698254|gb|ACN18743.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698257|gb|ACN18745.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698260|gb|ACN18747.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698263|gb|ACN18749.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698278|gb|ACN18759.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698281|gb|ACN18761.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698287|gb|ACN18765.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698299|gb|ACN18773.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698302|gb|ACN18775.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698311|gb|ACN18781.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698314|gb|ACN18783.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698317|gb|ACN18785.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698320|gb|ACN18787.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698323|gb|ACN18789.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698326|gb|ACN18791.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698329|gb|ACN18793.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698332|gb|ACN18795.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698335|gb|ACN18797.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698338|gb|ACN18799.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698344|gb|ACN18803.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698347|gb|ACN18805.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698350|gb|ACN18807.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698353|gb|ACN18809.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698356|gb|ACN18811.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698359|gb|ACN18813.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698362|gb|ACN18815.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698365|gb|ACN18817.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698368|gb|ACN18819.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698371|gb|ACN18821.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698374|gb|ACN18823.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698383|gb|ACN18829.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698386|gb|ACN18831.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698389|gb|ACN18833.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698392|gb|ACN18835.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698395|gb|ACN18837.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698398|gb|ACN18839.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698401|gb|ACN18841.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698404|gb|ACN18843.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698407|gb|ACN18845.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698410|gb|ACN18847.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698413|gb|ACN18849.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698416|gb|ACN18851.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698422|gb|ACN18855.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698425|gb|ACN18857.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698428|gb|ACN18859.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698431|gb|ACN18861.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698434|gb|ACN18863.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698437|gb|ACN18865.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698440|gb|ACN18867.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698443|gb|ACN18869.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698458|gb|ACN18879.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698461|gb|ACN18881.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698464|gb|ACN18883.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698467|gb|ACN18885.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698470|gb|ACN18887.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698473|gb|ACN18889.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698476|gb|ACN18891.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698479|gb|ACN18893.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698482|gb|ACN18895.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698488|gb|ACN18899.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698491|gb|ACN18901.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698494|gb|ACN18903.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698497|gb|ACN18905.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698500|gb|ACN18907.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698503|gb|ACN18909.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698506|gb|ACN18911.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698509|gb|ACN18913.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698512|gb|ACN18915.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698515|gb|ACN18917.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698521|gb|ACN18921.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698524|gb|ACN18923.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698527|gb|ACN18925.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698530|gb|ACN18927.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698533|gb|ACN18929.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698536|gb|ACN18931.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698539|gb|ACN18933.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698542|gb|ACN18935.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698545|gb|ACN18937.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698569|gb|ACN18953.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698572|gb|ACN18955.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698575|gb|ACN18957.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698578|gb|ACN18959.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698581|gb|ACN18961.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698584|gb|ACN18963.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698587|gb|ACN18965.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698590|gb|ACN18967.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698593|gb|ACN18969.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698596|gb|ACN18971.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698599|gb|ACN18973.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698602|gb|ACN18975.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698605|gb|ACN18977.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|223698245|gb|ACN18737.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|299535677|ref|ZP_07048998.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
gi|298728877|gb|EFI69431.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
Length = 528
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + +A+ ++ + + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLMV------TMAIPNKNFVQRASADTSDLKVAGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA-------IVSPWNRKTNN 132
T L +G P+ + +W Q++ + GW+ S L+ +A ++S +R
Sbjct: 58 T-LEEGDPLTSIGREGDWYQVKAGNYE-GWV-ASWLTAPTNAKQAIDKTVISQVDR---- 110
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWIKKQ 182
+N+ +PDI S ++ ++ G + E + EW +N T GW+ K
Sbjct: 111 ---LNIRTEPDISSAVLGQLSTGNQANLVEENEEWAKIDWNGLT-GWVSKD 157
>gi|210623715|ref|ZP_03293999.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
gi|210153403|gb|EEA84409.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
Length = 497
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
T+ A N R GPGI Y+ L KG V ++++ + W +I+D G W++ L
Sbjct: 28 ATVTADTLNMRSGPGISYSKRGV-LHKGAKVTILEKSKGWVKIKDSSGKTAWVSGQYL 84
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 88 VEVVKEYEN-WRQIRDFDGTIGWINKSLL------SGKR----------SAIVSPWNRKT 130
V+++++ +N W +++ G IGW++ L SG ++ + N K
Sbjct: 134 VQIIEKKDNGWSKVKTESGKIGWVSSKYLVNTPTNSGNTSSQENSSSQNDSVATSGNVKV 193
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N +N+ K P I+ + G ++ +E SG W
Sbjct: 194 NTSSGLNVRKGPGTNHSIIGSLAGGSVVQAKEKSGGW 230
>gi|251796870|ref|YP_003011601.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
gi|247544496|gb|ACT01515.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
Length = 369
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ R R G G+ + ++ YLTKG V ++ E W +++ D +GW++ ++
Sbjct: 116 ATVLVDRLRLRAGAGLNHEILG-YLTKGEAVTIIDNREGWVRVQTRDKQLGWVSDRYIAK 174
Query: 118 KRSAIVSPWNRKT 130
+ VS + K+
Sbjct: 175 GETQTVSVASGKS 187
>gi|225570090|ref|ZP_03779115.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
gi|225161560|gb|EEG74179.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
Length = 556
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 59 TIKASRANSRIG-PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ A + ++++ G + + V + L KG V V++ +NW+++R +G IG++ S L
Sbjct: 143 TVAAVKKDTQVRYQGGVKSPVLSELKKGGEVTVIENEDNWKKVRTKNGFIGYVKNSALKD 202
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDI----QSIIVAKVEPGVLLTIRECSG 165
V+ RK + N+ K I ++ + VL I E G
Sbjct: 203 AEKKNVT---RKFEEQEFTNISKDYTINMAWHNVTNSDANSSVLQKIAESKG 251
>gi|217964332|ref|YP_002350010.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|217333602|gb|ACK39396.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|307571102|emb|CAR84281.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes L99]
gi|313608674|gb|EFR84513.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
F2-208]
Length = 427
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|224499818|ref|ZP_03668167.1| hypothetical protein LmonF1_09084 [Listeria monocytogenes Finland
1988]
Length = 427
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|254509790|ref|ZP_05121857.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
gi|221533501|gb|EEE36489.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
Length = 195
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDF-DGTIGWINKSLL 115
I +R N R GPG +Y V+ T G VEV+ + W ++R F D +GWI+ SL+
Sbjct: 134 ISGTRVNMRDGPGTIYPVIA-KATIGQRVEVLGDSGTGWLRLRLFPDQRVGWISASLV 190
>gi|83589381|ref|YP_429390.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
gi|83572295|gb|ABC18847.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
Length = 657
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
V I S N R GPG Y V+ L + V+++ + W Q++ DG GW++ S
Sbjct: 160 VRITGSYVNVRTGPGTSYGVI-DVLPRDTLVQLLATGDGWYQVQLPDGRQGWVSAS 214
>gi|313623671|gb|EFR93825.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL J1-023]
Length = 427
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VIVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN +
Sbjct: 91 TDVSAASNSIAIVSSDGGLNVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKS- 149
Query: 177 GWIKKQ 182
W+ Q
Sbjct: 150 AWVSSQ 155
>gi|255030802|ref|ZP_05302753.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes LO28]
Length = 202
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWIKK 181
W+
Sbjct: 150 AWVSS 154
>gi|255025793|ref|ZP_05297779.1| hypothetical protein LmonocytFSL_04645 [Listeria monocytogenes FSL
J2-003]
Length = 436
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|16803561|ref|NP_465046.1| hypothetical protein lmo1521 [Listeria monocytogenes EGD-e]
gi|47097018|ref|ZP_00234591.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|224501539|ref|ZP_03669846.1| hypothetical protein LmonFR_03312 [Listeria monocytogenes FSL
R2-561]
gi|254828245|ref|ZP_05232932.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|254898313|ref|ZP_05258237.1| hypothetical protein LmonJ_00820 [Listeria monocytogenes J0161]
gi|254912195|ref|ZP_05262207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
gi|254936523|ref|ZP_05268220.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284801911|ref|YP_003413776.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284995053|ref|YP_003416821.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|16410950|emb|CAC99599.1| lmo1521 [Listeria monocytogenes EGD-e]
gi|47014600|gb|EAL05560.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|258600633|gb|EEW13958.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|258609117|gb|EEW21725.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284057473|gb|ADB68414.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284060520|gb|ADB71459.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|293590168|gb|EFF98502.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
Length = 427
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|295136524|ref|YP_003587200.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
gi|294984539|gb|ADF55004.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
Length = 402
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
IK S AN R P +V T T G+PV+V K+ +W I+ DG + W++ +
Sbjct: 112 IKISVANLREEPRHAAQLV-TQTTLGMPVKVYKKQGSWYYIQTPDGYLAWVDYGGIQNMT 170
Query: 120 SAIVSPWNRKTNNPIYINLYKK 141
+ W K + IY+N Y K
Sbjct: 171 KEQFADWKSK-DKLIYLNPYGK 191
>gi|237712834|ref|ZP_04543315.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262408810|ref|ZP_06085355.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|294648196|ref|ZP_06725736.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294810774|ref|ZP_06769422.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229447162|gb|EEO52953.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262353021|gb|EEZ02116.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|292636471|gb|EFF54949.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294442107|gb|EFG10926.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 326
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 50 EKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E +P+P + + S N R G + + T G+PV+V+ +Y W +I+ D
Sbjct: 23 EIRPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGMPVKVL-QYTGWYEIQTPDDY 80
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
GW+++ +++ WNR Y Y+KPD S V+ V G L
Sbjct: 81 TGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGS 140
Query: 164 SGEW 167
G +
Sbjct: 141 KGHF 144
>gi|290893880|ref|ZP_06556858.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
gi|290556597|gb|EFD90133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
Length = 427
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTE 176
+ S ++ +N+ +KP S + + G +T+ W YN T
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYN-GTS 149
Query: 177 GWI 179
W+
Sbjct: 150 AWV 152
>gi|253581038|ref|ZP_04858299.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847701|gb|EES75670.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 549
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
G + + + T + KG + +++E ENW Q+ DG IG+I+K
Sbjct: 172 GGIKSAILTSVKKGTKLRLIEEMENWDQVATDDGYIGYIDK 212
>gi|138896826|ref|YP_001127279.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
gi|134268339|gb|ABO68534.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
Length = 449
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
E K R + R N R GPG+ Y + + +G ++ + W +I IGW
Sbjct: 28 ENKKKERLAVVTVDRVNVRQGPGVPYRPLAN-VHRGETYRLIDIKDGWLKIEWKKNKIGW 86
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I S + R + +R + L ++P + I+ + G + + + GEW
Sbjct: 87 IAASYAAPVREMEIVQEDR-------LRLRQEPGLDGRIIGHLAQGDQVIVIKEKGEWKQ 139
Query: 170 GYNLDTEGWI 179
GW+
Sbjct: 140 IVTKKAVGWV 149
>gi|196250403|ref|ZP_03149095.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
gi|196210062|gb|EDY04829.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
Length = 449
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
E K R + R N R GPG+ Y + + +G ++ + W +I IGW
Sbjct: 28 ENKKKERLAVVTVDRVNVRQGPGVPYRPLAN-VHRGETYRLIDIKDGWLKIEWKKNKIGW 86
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I S + R + +R + L ++P + I+ + G + + + GEW
Sbjct: 87 IAASYAAPVREMEIVQEDR-------LRLRQEPGLDGRIIGHLAQGDQVIVIKEKGEWKQ 139
Query: 170 GYNLDTEGWI 179
GW+
Sbjct: 140 IVTKKAVGWV 149
>gi|298484068|ref|ZP_07002236.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
gi|298269749|gb|EFI11342.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
Length = 326
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 50 EKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E +P+P + + S N R G + + T G+PV+V+ +Y W +I+ D
Sbjct: 23 EIRPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGMPVKVL-QYTGWYEIQTPDDY 80
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
GW+++ +++ WNR Y Y+KPD S V+ V G L
Sbjct: 81 TGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGS 140
Query: 164 SGEW 167
G +
Sbjct: 141 KGHF 144
>gi|154686899|ref|YP_001422060.1| YrvJ [Bacillus amyloliquefaciens FZB42]
gi|154352750|gb|ABS74829.1| YrvJ [Bacillus amyloliquefaciens FZB42]
Length = 520
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 17/143 (11%)
Query: 54 LPRFVT---------IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
LP F T I + N R GPG+ Y + + KG + KE +W Q++
Sbjct: 19 LPSFHTAIAAEGEAVIATDKINVRGGPGLSYGIKAE-VKKGERYPIAKEEGDWVQLQLSP 77
Query: 105 GTIGW-----INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
G GW I+K+ S+ S T+ + I K P ++ K+ G +
Sbjct: 78 GKTGWVVSWLISKTAGGADHSSATSGTVTSTDPDLRIR--KGPGTSYEVIGKLPQGAHAS 135
Query: 160 IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + W T GW+ +
Sbjct: 136 VLDKNSGWVNISYQGTTGWVSSE 158
>gi|295087660|emb|CBK69183.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Bacteroides xylanisolvens XB1A]
Length = 326
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 50 EKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E +P+P + + S N R G + + T G+PV+V+ +Y W +I+ D
Sbjct: 23 EIRPMPADSAYGVVHISVCNLR-EEGKFTSGMSTQALLGMPVKVL-QYTGWYEIQTPDDY 80
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
GW+++ +++ WNR Y Y+KPD S V+ V G L
Sbjct: 81 TGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGS 140
Query: 164 SGEW 167
G +
Sbjct: 141 KGHF 144
>gi|294499793|ref|YP_003563493.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
gi|294349730|gb|ADE70059.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
Length = 583
Score = 35.4 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P +V +TKG V++V E + W +I + G WI+ ++ +
Sbjct: 35 VTATSLNVRATPSTSGAIVGK-ITKGNTVDIVDESKGWAKI-TYSGKEAWISSQYINKTQ 92
Query: 120 SAIVSPWNRKTNNPIY----INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ S N + + + +N+ + IV + +T+ + SG W
Sbjct: 93 TNSTSTANSTSKSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQVKTASG 152
Query: 176 E-GWIKKQ 182
+ GW+ Q
Sbjct: 153 QTGWVASQ 160
>gi|116872950|ref|YP_849731.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741828|emb|CAK20952.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 427
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VIVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENEWYKVQLDNGNTGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S ++ +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSASLGLLNNGDQVTVTSQQNGWA 141
>gi|56421790|ref|YP_149108.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
gi|56381632|dbj|BAD77540.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
Length = 446
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN--NPIY 135
+ +L +G V ++KE W ++ DG IGW++ + L+ R + +S +T N
Sbjct: 118 IIGHLARGETVWIIKEDGEWTEVI-ADGAIGWVSSAYLTAARESSIS---HQTGIVNASS 173
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGWI 179
+N+ +P +++ V ++ G + I E W +GW+
Sbjct: 174 LNVRAEPSLKAARVGRLVRGEEVEIVEKKPGWYKIASQTGLDGWV 218
>gi|261420695|ref|YP_003254377.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|319768365|ref|YP_004133866.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
gi|261377152|gb|ACX79895.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|317113231|gb|ADU95723.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
Length = 448
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ +L +G V V+KE W ++ DG IGW++ + L+ R + +S N +N
Sbjct: 120 IIGHLARGETVWVIKEDGEWTEVI-ADGAIGWVSSAYLTAARESSISH-QTGIVNASSLN 177
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +P +++ V ++ G + I E W
Sbjct: 178 VRAEPSLKAARVGRLVRGEEVEIVEKKPGW 207
>gi|319953009|ref|YP_004164276.1| nlp/p60 protein [Cellulophaga algicola DSM 14237]
gi|319421669|gb|ADV48778.1| NLP/P60 protein [Cellulophaga algicola DSM 14237]
Length = 385
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F + S AN R P + T T G PV+++K+ +W I+ D + W++ +
Sbjct: 87 HFGLVTISVANLRSNPK-HSAELGTQATLGTPVKIIKKEGSWSLIQTPDQYLSWVDDGGI 145
Query: 116 SGKRSAIVSPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTI 160
+A W + IY N Y PD S +V+ + G +L +
Sbjct: 146 VAMNAADYQHW-KDAQKMIYTKISGNTYTMPDETSQVVSDIVAGGILEL 193
>gi|219848908|ref|YP_002463341.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
gi|219543167|gb|ACL24905.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
Length = 536
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGW 109
PL T+ A A R GPG+ Y + L G +EVV + W Q R D T+ W
Sbjct: 147 NAPLIVPATVTADVAKVRNGPGLAYDDIAR-LNGGTTIEVVGRHNEWLQFRTTDDPTLRW 205
Query: 110 INKSLLS 116
I L+
Sbjct: 206 IAAELVD 212
>gi|158521500|ref|YP_001529370.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510326|gb|ABW67293.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 190
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 31 AIYFYLAPILAL-----SHEKEIFEKKPLPRFV--TIKASRANSRIGPGIMYTVVCTYLT 83
A YF+LA +++L + + + +P P ++ TIK + R G G M + + LT
Sbjct: 3 APYFFLAIVVSLLVVFPGYARAV---QPGPAYISDTIKITM---RTGQG-MDNKIVSLLT 55
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
G +EV++ + W IR +G GWI S +S
Sbjct: 56 VGQAIEVLEPGDEWSLIRAANGKEGWILSSFIS 88
>gi|315303279|ref|ZP_07873917.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
gi|313628352|gb|EFR96847.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
Length = 427
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQVRKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S + +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVTSDGGLNVREKPSTSSNSLGLLNNGDQVTVTSQQDGWA 141
>gi|210614128|ref|ZP_03290064.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
gi|210150829|gb|EEA81837.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
Length = 623
Score = 35.0 bits (79), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T ++K V V++ +W+++R DG IG+I K+ L ++ +S R+ +Y N+
Sbjct: 232 TEVSKKDKVTVIENEGDWKKVRTEDGYIGYIKKNCLKNEKEETIS---REFEEQVYTNIS 288
Query: 140 KKPDI----QSIIVAKVEPGVLLTIRECSG 165
K I + VL TI + G
Sbjct: 289 KDYTINMAWHVVTNQSANEKVLQTIADTKG 318
>gi|315282433|ref|ZP_07870849.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
gi|313613922|gb|EFR87650.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
Length = 427
Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +KA N R GPG+ Y V + K + VV E W +++ +G GW+ L+
Sbjct: 32 VVVKAEVLNVRSGPGLAYD-VTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVEN 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ S ++ +N+ +KP S + + G +T+ W
Sbjct: 91 TDVSAASNSVAIVSSDGGLNVREKPSTSSNSLGLLNKGDQVTVTSQQNGWA 141
>gi|326790641|ref|YP_004308462.1| hypothetical protein Clole_1538 [Clostridium lentocellum DSM 5427]
gi|326541405|gb|ADZ83264.1| protein of unknown function DUF187 [Clostridium lentocellum DSM
5427]
Length = 566
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
P+ T+ A+ N R G +V L KG V ++ +W +++ DGTIGW K+
Sbjct: 505 FPKQGTVNATSLNIRAGARTDRAIVAK-LAKGTKVTILSILGDWYKVKLADGTIGWCVKT 563
Query: 114 LLS 116
+S
Sbjct: 564 YIS 566
>gi|291460251|ref|ZP_06599641.1| glycosyl hydrolase, family 18 [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417198|gb|EFE90917.1| glycosyl hydrolase, family 18 [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 585
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ +K IF ++ S R R+ G+ V+ T L+KG V V++ E W ++R
Sbjct: 176 TEQKRIFLDNSRGQYTEATLSGREAVRLKGGVKSEVL-TMLSKGDTVTVLESMEKWSKVR 234
Query: 102 DFDGTIGWINKSLLSGKR 119
DG IG++ S L+ R
Sbjct: 235 TGDGFIGFLRNSKLTDIR 252
>gi|163754421|ref|ZP_02161543.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
gi|161325362|gb|EDP96689.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
Length = 253
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI LA F + + A+++++ +K P V K + S P + V L +G
Sbjct: 165 LISFLAFLFIIGTV-AIAYQQYGKAQKDRPAIVFAKETTVKSE--PNLRSDEVFV-LHEG 220
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWI 110
V+V+ +NW++I+ DG IGWI
Sbjct: 221 TKVQVLDTVDNWKKIQLIDGKIGWI 245
>gi|301598777|pdb|3NPF|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
gi|301598778|pdb|3NPF|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
Length = 306
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKK 141
G PV+V+ +Y W +I+ D GW+++ +++ WNR Y Y+K
Sbjct: 40 GXPVKVL-QYNGWYEIQTPDDYTGWVHRXVITPXSKERYDEWNRAEKIVVTSHYGFAYEK 98
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEW 167
PD S V+ V G L G +
Sbjct: 99 PDESSQPVSDVVAGNRLKWEGSKGHF 124
>gi|320116294|ref|YP_004186453.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|319929385|gb|ADV80070.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 379
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 98 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 156
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ K PI +N+ +I + ++A+V + +
Sbjct: 157 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 216
Query: 162 ECSGEWCFGYNL----DTEGWIKKQ 182
W YN+ EGWI Q
Sbjct: 217 GNQNGW---YNIRLSDGREGWIYGQ 238
>gi|291485167|dbj|BAI86242.1| hypothetical protein BSNT_04002 [Bacillus subtilis subsp. natto
BEST195]
Length = 561
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IFT A++ + + A E I N R GPG+ Y + + KG
Sbjct: 55 IIFTAALFPTFSSVTAAQGE------------AVIATDETNVRSGPGLSYGITAE-VKKG 101
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWI 110
++KE +W QI+ G GW+
Sbjct: 102 ERYPILKEDGDWVQIQLGSGEKGWV 126
>gi|328554379|gb|AEB24871.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens TA208]
gi|328912784|gb|AEB64380.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens LL3]
Length = 517
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 15/142 (10%)
Query: 54 LPRFVT---------IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
LP F T I + N R GPG+ Y + + KG ++KE +W Q++
Sbjct: 19 LPSFHTAVAAEGEAVIATDKINVRGGPGLSYEIKAE-VKKGERYPILKEEGDWVQLQLSP 77
Query: 105 GTIGWINKSLLS----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
G GW+ L+S G +A + +P + + K P ++ K G ++
Sbjct: 78 GKTGWVVSWLISKTAGGADNASAKSGTVTSTDPD-LRIRKGPGTSYEVIGKFPQGAHASM 136
Query: 161 RECSGEWCFGYNLDTEGWIKKQ 182
+ + W T GW+ +
Sbjct: 137 LDKNSGWVNISYQGTTGWVSSE 158
>gi|164688702|ref|ZP_02212730.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
gi|164602178|gb|EDQ95643.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
Length = 399
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
T+ I + +A +S E + I +R N R GP YT+V T L KG+ V
Sbjct: 25 TIGINYNIASADIVSQE------------IYITTNRLNMRKGPSTDYTLVGT-LDKGVKV 71
Query: 89 EVVKEYENWRQIR-DFDGTIGWINKSLLSGKRSA-----IVSPWNRKTNNPIYINLYKKP 142
+ +++ + + ++ +++ W+N + L +S+ + S + N +N+ K P
Sbjct: 72 KAIEKSSDGKWLKINYNSQNVWVNFAYLQKDKSSNNDIKLDSQYETTAN----VNMRKGP 127
Query: 143 --DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
D II+ + + G+W + GWI Q I
Sbjct: 128 STDYTKIIIVPAQTKITPIKSSSDGKWVQINYKNVTGWISAQYI 171
>gi|167037877|ref|YP_001665455.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166856711|gb|ABY95119.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 424
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 143 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 201
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ K PI +N+ +I + ++A+V + +
Sbjct: 202 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 261
Query: 162 ECSGEWCFGYNL----DTEGWIKKQ 182
W YN+ EGWI Q
Sbjct: 262 GNQNGW---YNIRLSDGREGWIYGQ 283
>gi|300914812|ref|ZP_07132128.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307723954|ref|YP_003903705.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
gi|300889747|gb|EFK84893.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307581015|gb|ADN54414.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
Length = 379
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 98 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 156
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ K PI +N+ +I + ++A+V + +
Sbjct: 157 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 216
Query: 162 ECSGEWCFGYNL----DTEGWIKKQ 182
W YN+ EGWI Q
Sbjct: 217 GNQNGW---YNIRLSDGREGWIYGQ 238
>gi|123437062|ref|XP_001309331.1| NLP/P60 family protein [Trichomonas vaginalis G3]
gi|121891053|gb|EAX96401.1| NLP/P60 family protein, putative [Trichomonas vaginalis G3]
Length = 294
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y V+ + G + V NW Q+ ++G G++ L S +
Sbjct: 44 NIRSGPGTGYGVIAA-VADGTTLSVTGHSSNWWQV-SYNGQTGYVISDYLKVSGSVSGTG 101
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +VA + G +TI +G+W Y++ ++G++ Q I
Sbjct: 102 --------SGLNVRAGPGTNYAVVAGLSDGTSVTITGINGDW---YHI-SQGYVYSQYI 148
>gi|167040774|ref|YP_001663759.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
gi|166855014|gb|ABY93423.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
Length = 424
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 143 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 201
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ K PI +N+ +I + ++A+V + +
Sbjct: 202 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 261
Query: 162 ECSGEWCFGYNL----DTEGWIKKQ 182
W YN+ EGWI Q
Sbjct: 262 GNQNGW---YNIRLSDGREGWIYGQ 283
>gi|256750985|ref|ZP_05491868.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256750095|gb|EEU63116.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 410
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 129 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 187
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ K PI +N+ +I + ++A+V + +
Sbjct: 188 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 247
Query: 162 ECSGEWCFGYNL----DTEGWIKKQ 182
W YN+ EGWI Q
Sbjct: 248 GNQNGW---YNIRLSDGREGWIYGQ 269
>gi|309789810|ref|ZP_07684389.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
gi|308228114|gb|EFO81763.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
Length = 141
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
AN R GP T V + KG V +++ +W ++R DGT GW+ ++L
Sbjct: 78 ANLRSGPST-NTAVVAVVRKGTQVGLLERQGDWYRVRTPDGTQGWMANTVL 127
>gi|255655134|ref|ZP_05400543.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296451122|ref|ZP_06892863.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296880526|ref|ZP_06904488.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296259943|gb|EFH06797.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296428480|gb|EFH14365.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 424
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y+++ L G VE+ + W +++ +GT GW++ S +S
Sbjct: 212 NVRSGPGTSYSIIGK-LNGGDVVELKAKNNGWYKVKLSNGTTGWVSGSYIS 261
>gi|224371145|ref|YP_002605309.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
gi|223693862|gb|ACN17145.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
Length = 204
Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P+L + +E E + V++ N R GPG+ Y V + +G + V +E W
Sbjct: 119 PVLTAAEREETAEIVKVKEEVSVAVEILNVRSGPGMTYG-VSSLAYQGQILRVYQESTGW 177
Query: 98 RQIRDFDGTIGWINKSLLS 116
+ G +GW++K ++
Sbjct: 178 LYVELPSGKLGWVDKKFIT 196
>gi|221310696|ref|ZP_03592543.1| hypothetical protein Bsubs1_15076 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315020|ref|ZP_03596825.1| hypothetical protein BsubsN3_14987 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319941|ref|ZP_03601235.1| hypothetical protein BsubsJ_14898 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324222|ref|ZP_03605516.1| hypothetical protein BsubsS_15042 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 561
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 48 IFEKKPLPRFVTIKASRA---------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
IF P F ++ A++ N R GPG+ Y + + KG ++KE +W
Sbjct: 56 IFTSALFPTFSSVTAAQGEAVIATDEMNVRSGPGLSYGITAE-VKKGERYPILKEDGDWV 114
Query: 99 QIRDFDGTIGWI 110
QI+ G GW+
Sbjct: 115 QIQLGSGEKGWV 126
>gi|16079812|ref|NP_390636.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus subtilis
subsp. subtilis str. 168]
gi|81342118|sp|O32041|YRVJ_BACSU RecName: Full=Putative N-acetylmuramoyl-L-alanine amidase YrvJ;
Flags: Precursor
gi|2635222|emb|CAB14717.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. subtilis str. 168]
Length = 518
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 48 IFEKKPLPRFVTIKASRA---------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
IF P F ++ A++ N R GPG+ Y + + KG ++KE +W
Sbjct: 13 IFTSALFPTFSSVTAAQGEAVIATDEMNVRSGPGLSYGITAE-VKKGERYPILKEDGDWV 71
Query: 99 QIRDFDGTIGWI 110
QI+ G GW+
Sbjct: 72 QIQLGSGEKGWV 83
>gi|309792796|ref|ZP_07687239.1| NLP/P60 protein [Oscillochloris trichoides DG6]
gi|308225160|gb|EFO78945.1| NLP/P60 protein [Oscillochloris trichoides DG6]
Length = 536
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P T+ + N R GPG Y V + + G V ++ +Y++W ++ DGT WI L
Sbjct: 310 PLVGTVLENAVNMRKGPGSAYDRVAS-INAGAQVTLLGKYKDWFKVELSDGTKAWIFSDL 368
Query: 115 L 115
+
Sbjct: 369 M 369
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLS 116
R GPG+ Y + +T G VEV+ +E W Q+R D TI W+ L+
Sbjct: 159 RNGPGLAYDEI-NRITGGSNVEVIGRHEEWLQVRQADDATIYWVAAELVD 207
>gi|301163714|emb|CBW23268.1| putative peptidase [Bacteroides fragilis 638R]
Length = 400
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPI 134
+ T G+PV+V+ ++ NW +I+ D I W+++ + A + WN+
Sbjct: 127 MTTQALMGMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDAWNKADKIVVTSH 185
Query: 135 YINLYKKPDIQSIIVAKVEPG 155
Y Y++PD +S V+ V G
Sbjct: 186 YGFTYQQPDAKSQSVSDVVAG 206
>gi|253564682|ref|ZP_04842138.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
gi|251946147|gb|EES86524.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
Length = 400
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPI 134
+ T G+PV+V+ ++ NW +I+ D I W+++ + A + WN+
Sbjct: 127 MTTQALMGMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDAWNKADKIVVTSH 185
Query: 135 YINLYKKPDIQSIIVAKVEPG 155
Y Y++PD +S V+ V G
Sbjct: 186 YGFTYQQPDAKSQSVSDVVAG 206
>gi|313148143|ref|ZP_07810336.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
gi|313136910|gb|EFR54270.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
Length = 323
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPI 134
+ T G+PV+V+ ++ NW +I+ D I W+++ + A + WN+
Sbjct: 50 MTTQALMGMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDAWNKADKIVVTSH 108
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
Y Y++PD +S V+ V G L G
Sbjct: 109 YGFTYQQPDEKSQSVSDVVAGNRLKYEGTQG 139
>gi|149182098|ref|ZP_01860582.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
gi|148850200|gb|EDL64366.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
Length = 870
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFD 104
E + + TI A N R G Y+V+ L G V+V+ +EN W +I +FD
Sbjct: 78 ESSLIGKETTINADTVNIRKGASTSYSVIDK-LNTGKVVKVIDTFENSLNELWYRI-EFD 135
Query: 105 GTIGWINKSLLS 116
G GW+ LLS
Sbjct: 136 GKRGWVFHRLLS 147
>gi|116490652|ref|YP_810196.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
gi|116091377|gb|ABJ56531.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
Length = 315
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSL 114
+ +T KA + R GPG MY + T+ + + ++KE W ++R D GW+ +
Sbjct: 48 KSITTKAKKTVLRDGPGPMYKQLATF-SNSEKLTILKEKHGWLKVRSSIDKKTGWVASWV 106
Query: 115 LSGKRSAIVSPWNRKTNNPIYIN 137
GK + VS R T I ++
Sbjct: 107 AEGKANN-VSKVTRMTEATIVLD 128
>gi|116333379|ref|YP_794906.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
gi|116098726|gb|ABJ63875.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
Length = 283
Score = 34.3 bits (77), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
VT S N R GPG+ Y + K + ++ E NW +RD GW+
Sbjct: 34 VTATVSNLNLRNGPGLTYQATHK-VKKNSRLTILGEKNNWYHVRDSQNHFGWV 85
>gi|224826225|ref|ZP_03699327.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
gi|224601326|gb|EEG07507.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
Length = 148
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
PVEV+ + W ++RD G I WI + LS +R +V
Sbjct: 54 PVEVLTSQKEWSRVRDATGGIAWIPVAALSTQRMLLV 90
>gi|254460908|ref|ZP_05074324.1| SH3, type 3 [Rhodobacterales bacterium HTCC2083]
gi|206677497|gb|EDZ41984.1| SH3, type 3 [Rhodobacteraceae bacterium HTCC2083]
Length = 170
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFD-GTIGWINKSLLSG 117
+ A+R N R GPG + V+ LT G VE++++ + W ++R D G GW+ LL+
Sbjct: 109 VTAARVNMRDGPGQNFDVIA-KLTNGQQVEILQDPGDGWVKLRVGDTGREGWMADFLLTA 167
Query: 118 KRS 120
+
Sbjct: 168 SNN 170
>gi|255010344|ref|ZP_05282470.1| dipeptidyl peptidase VI [Bacteroides fragilis 3_1_12]
Length = 400
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPI 134
+ T G+PV+V+ ++ NW +I+ D I W+++ + A + WN+
Sbjct: 127 MTTQALMGMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDAWNKADKIVVTSH 185
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
Y Y++PD +S V+ V G L G
Sbjct: 186 YGFTYQQPDEKSQSVSDVVAGNRLKYEGTQG 216
Searching..................................................done
Results from round 2
>gi|254780764|ref|YP_003065177.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040441|gb|ACT57237.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 194
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI
Sbjct: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS
Sbjct: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK
Sbjct: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
Query: 181 KQKIWGIYPGEVFK 194
KQKIWGIYPGEVFK
Sbjct: 181 KQKIWGIYPGEVFK 194
>gi|148558959|ref|YP_001259969.1| hypothetical protein BOV_2088 [Brucella ovis ATCC 25840]
gi|148370216|gb|ABQ60195.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 245
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPR 56
T + LY + +++M I SL F L + AP + +H +P+PR
Sbjct: 50 TARGRSLYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPR 108
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLS
Sbjct: 109 FASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLS 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
GKR+AI +PW + + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 169 GKRTAITAPWLK-NDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVR 227
Query: 177 GWIKKQKIWGIYPGEVFK 194
GWIK+ ++WG+YPGEVF
Sbjct: 228 GWIKQSELWGVYPGEVFD 245
>gi|190889806|ref|YP_001976348.1| hypothetical protein RHECIAT_CH0000174 [Rhizobium etli CIAT 652]
gi|190695085|gb|ACE89170.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 179
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAEADGATGWVAQSEIWGAYPGEAFK 179
>gi|237816515|ref|ZP_04595508.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788582|gb|EEP62797.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 245
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPR 56
T + LY + +++M I SL F L + P + +H +P+PR
Sbjct: 50 TARGRSLYRVLSQRFMIAIF-GSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPR 108
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLS
Sbjct: 109 FASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLS 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
GKR+AI +PW + + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 169 GKRTAITAPWLK-NDKGTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVR 227
Query: 177 GWIKKQKIWGIYPGEVFK 194
GWIK+ ++WG+YPGEVF
Sbjct: 228 GWIKQSELWGVYPGEVFD 245
>gi|327192784|gb|EGE59713.1| hypothetical protein RHECNPAF_1930010 [Rhizobium etli CNPAF512]
Length = 179
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 179
>gi|241207089|ref|YP_002978185.1| hypothetical protein Rleg_4408 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860979|gb|ACS58646.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 220 bits (560), Expect = 9e-56, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L + L + + + + A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLTSCLALAIVLAASMGSVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + IY
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC + GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIVAKLEPGVMLTIGECNGDWCRAESDGASGWVAQSEIWGAYPGEAFK 179
>gi|239833225|ref|ZP_04681554.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825492|gb|EEQ97060.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 225
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Query: 3 THAEKILYSLDLRKYMPKIL-----QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
T + LY + +++M L L A + A + P+PRF
Sbjct: 30 TARGRSLYRVLSQRFMMATLGFLAFFLFLAPLGASQNHGAQAAEPAGTSVGASGLPVPRF 89
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V++K +R N R+GPG Y V ++ GLPVE+++EY+NWR+IRD DGT GW+ +SLLSG
Sbjct: 90 VSLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIIQEYDNWRRIRDADGTEGWVYQSLLSG 149
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
KR+AI +PW + N IN+ + S +VA++EPGV+ T+REC+G+WC G
Sbjct: 150 KRTAITAPWLK-NNQGSMINMRRDASETSGLVAEIEPGVVGTVRECTGQWCRLDMGGVRG 208
Query: 178 WIKKQKIWGIYPGEVFK 194
WIK+ +WG+YPGEVF
Sbjct: 209 WIKQSDLWGVYPGEVFD 225
>gi|306843593|ref|ZP_07476194.1| Bacterial SH3-like region [Brucella sp. BO1]
gi|306276284|gb|EFM57984.1| Bacterial SH3-like region [Brucella sp. BO1]
Length = 190
Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + ++H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|260567357|ref|ZP_05837827.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306839954|ref|ZP_07472748.1| Bacterial SH3-like region [Brucella sp. NF 2653]
gi|260156875|gb|EEW91955.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306404918|gb|EFM61203.1| Bacterial SH3-like region [Brucella sp. NF 2653]
Length = 190
Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|218662759|ref|ZP_03518689.1| hypothetical protein RetlI_26864 [Rhizobium etli IE4771]
Length = 194
Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L P+ A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 16 MRSKVLKSCLALAIALAASLGPVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 75
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + I+
Sbjct: 76 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIF 135
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 136 VNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 194
>gi|260563075|ref|ZP_05833561.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265999711|ref|ZP_05467487.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260153091|gb|EEW88183.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263095439|gb|EEZ19040.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 190
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|315121981|ref|YP_004062470.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495383|gb|ADR51982.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 177
Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats.
Identities = 127/177 (71%), Positives = 147/177 (83%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M +I I TLAIYFY+ S E EI +K+ +PRFVTIK++RAN+RIGPG +YTV
Sbjct: 1 MSRISHIFFISTLAIYFYVVQAPIFSQEVEISKKQLIPRFVTIKSNRANARIGPGTIYTV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
VCTYL +GLPVE+++EYENWRQIRD DGT GWINK LLS KRSAIVSPWNRK N YI+
Sbjct: 61 VCTYLIRGLPVEIIQEYENWRQIRDVDGTTGWINKILLSNKRSAIVSPWNRKEKNRPYID 120
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L++KP+ QSI+VAKVEPGVLLTIRECSGEWCFGYN D EGWIK++KIWGIYPGEVFK
Sbjct: 121 LHQKPETQSIVVAKVEPGVLLTIRECSGEWCFGYNSDVEGWIKQKKIWGIYPGEVFK 177
>gi|297247399|ref|ZP_06931117.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
gi|297174568|gb|EFH33915.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
Length = 190
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|225626541|ref|ZP_03784580.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261759107|ref|ZP_06002816.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|225618198|gb|EEH15241.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261739091|gb|EEY27087.1| conserved hypothetical protein [Brucella sp. F5/99]
Length = 190
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/192 (40%), Positives = 118/192 (61%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|189025226|ref|YP_001935994.1| SH3 domain protein [Brucella abortus S19]
gi|260546276|ref|ZP_05822016.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|189020798|gb|ACD73520.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260096383|gb|EEW80259.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
Length = 190
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/192 (40%), Positives = 118/192 (61%), Gaps = 8/192 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + P + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLK-NDKGTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVFK 194
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVFD 190
>gi|227824000|ref|YP_002827973.1| hypothetical protein NGR_c34960 [Sinorhizobium fredii NGR234]
gi|227343002|gb|ACP27220.1| conserved hypothetical protein contains bacterial SH3-like region
[Sinorhizobium fredii NGR234]
Length = 215
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 82/190 (43%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
+ +R ++ K Q L LA + AL+ + PLPRFV++K+
Sbjct: 28 RLRSDTGFVMRHFISKASQLLLAVFLAT--AIMNSAALAQAAKGPSGLPLPRFVSLKSRS 85
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N RIGP + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +
Sbjct: 86 VNLRIGPSLDYAVAFRYLKTGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAVAA 145
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
PW R I++NL + P + IVA+++PGVLL I EC+G+WC EGWI + +I
Sbjct: 146 PWMRGKGEGIFVNLRRDPQGTAPIVARMQPGVLLHIGECNGDWCHAETQGVEGWIAQGEI 205
Query: 185 WGIYPGEVFK 194
WG YPGE FK
Sbjct: 206 WGAYPGEAFK 215
>gi|116249911|ref|YP_765749.1| hypothetical protein RL0144 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254559|emb|CAK05633.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 179
Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ + + A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASMGSVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + IY
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC + GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIVAKLEPGVMLTIGECNGDWCRAESDGASGWVAQSEIWGAYPGEAFK 179
>gi|150398568|ref|YP_001329035.1| hypothetical protein Smed_3379 [Sinorhizobium medicae WSM419]
gi|150030083|gb|ABR62200.1| protein of unknown function DUF1058 [Sinorhizobium medicae WSM419]
Length = 183
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
S +R + +I ++L + L A + + PLPRFV++KA N RIG
Sbjct: 2 SFVMRHVISRI--SALTMAALLGAVLTASTAHAQAAKGPSGLPLPRFVSLKAKSVNLRIG 59
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 60 PSVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAMAAPWMRSK 119
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+++N+ + P + IVA++EPGV+L I EC+G+WC EGWI + +IWG YPG
Sbjct: 120 GEGVFVNMRRDPQGTAPIVARIEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPG 179
Query: 191 EVFK 194
E FK
Sbjct: 180 EAFK 183
>gi|209551659|ref|YP_002283576.1| hypothetical protein Rleg2_4088 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537415|gb|ACI57350.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ + + LA + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASMGTVELAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKAKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREALPSASIVAKLEPGVMLTIGECNGDWCRAETDGASGWVAQSEIWGAYPGEAFK 179
>gi|319405040|emb|CBI78650.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 185
Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 110/186 (59%), Gaps = 7/186 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE-----IFEKKPLPRFVTIKASRANSR 68
++ ++ L L L L LA SH + PLPRF +IK++R N R
Sbjct: 1 MKHFIWFRLFILLSCVLMTGKLLFGSLAFSHPQTLNQNLGTSGLPLPRFASIKSARVNMR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
IGPG Y+++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW +
Sbjct: 61 IGPGNNYSIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + L K P IVA++EP ++ IR+C+G WC +T GW+ + ++WGIY
Sbjct: 121 DKVHRLM--LRKNPGDNEKIVAEIEPNIIGNIRQCNGIWCELDIRNTRGWLHQNQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|49473801|ref|YP_031843.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
gi|49239304|emb|CAF25630.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
Length = 185
Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE---IFEKKPLPRFVTIKASRANSR 68
+ ++ ++ IF ++ + + + PLPRF +IK +R N R
Sbjct: 1 MQYSRWFRFLVLAPFIFMAGVFTFSSSDFLHAQTLNQNLGPSGLPLPRFASIKPTRVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
IGPG Y+++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 IGPGSNYSIIFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L K P + +VA+VEP V+ I +C G WC + GW+ + ++WGIY
Sbjct: 121 DKTKRLM--LRKTPTDNAKVVAEVEPNVIGNIHQCDGYWCELDINNIRGWLHQPQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|319898321|ref|YP_004158414.1| hypothetical protein BARCL_0143 [Bartonella clarridgeiae 73]
gi|319402285|emb|CBI75824.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 185
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 106/179 (59%), Gaps = 2/179 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ + + L + H++ PLPRF +IK++R N R+GPG Y
Sbjct: 8 RFFVLLSCVLMTGGLLFGSFAFSYSQTPHQEFSPSGLPLPRFASIKSARVNMRVGPGNNY 67
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW + + +
Sbjct: 68 SIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKKHRLM 127
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K P + IVA+VEP ++ IR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 128 --LRKNPRDNAKIVAEVEPNIIGNIRQCNGSWCELDIHNIRGWLNQTQLWGIYPDEKIK 184
>gi|86355796|ref|YP_467688.1| hypothetical protein RHE_CH00136 [Rhizobium etli CFN 42]
gi|86279898|gb|ABC88961.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 179
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 78/155 (50%), Positives = 106/155 (68%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + + PLPRFVT+K+ R N RIGPG + V YL GLPVE+++EY+NWR+
Sbjct: 25 FAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDFAVSWMYLKSGLPVEIIQEYDNWRR 84
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
IRD DGT GW+N+SLLSG+R+AI +PW + +Y+NL ++ + IVAK+EPGV+LT
Sbjct: 85 IRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVYVNLRREAQPSASIVAKLEPGVMLT 144
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 145 IGECNGDWCHAETDGAAGWVAQSEIWGAYPGEAFK 179
>gi|319403613|emb|CBI77198.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 185
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE-----IFEKKPLPRFVTIKASRANSR 68
++ ++ L L L L+ SH + PLPRF +IK++R N R
Sbjct: 1 MKHFIWFRFFVLLSCILMTGGLLFGSLSFSHSQTLNQDLGPSGLPLPRFASIKSARVNMR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW +
Sbjct: 61 VGPGNNYSIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + L K P IVA++EP ++ TIR+C+G WC + GW+ + ++WGIY
Sbjct: 121 DKTHRLM--LRKNPGDNEKIVAEIEPNIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|163867430|ref|YP_001608627.1| hypothetical protein Btr_0145 [Bartonella tribocorum CIP 105476]
gi|161017074|emb|CAK00632.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 186
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 5/186 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE---IFEKKPLPRFVTIKASRANSR 68
+ + ++ S I + +P L + PLPRF +IK +R N R
Sbjct: 1 MQNSRLYHVLMLASCILIAKVIVLGSPRLLHAQTLNQNLGPSGLPLPRFASIKPTRVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSNYSIIFTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L KKP + ++A+VEP V+ I +C G+WC + GW+ + ++WGIY
Sbjct: 121 DKTKRLM--LRKKPTDNAELLAEVEPNVIGNIHQCDGQWCEITLNNVHGWLHQSQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|240849802|ref|YP_002971190.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
gi|240266925|gb|ACS50513.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
Length = 186
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 5/186 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHE---KEIFEKKPLPRFVTIKASRANSR 68
+ ++ + S I + +P L + PLPRF +IK + N R
Sbjct: 1 MQNSRWFRVSILTSCILIATVIVLGSPHLLHAQTFNQNLGPSGLPLPRFASIKPTSVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSNYSIIFTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L K P + +VA+VEP V+ IR+C G+WC +T GW+++ ++WGIY
Sbjct: 121 DKTKRLM--LRKNPTDNAELVAEVEPNVIGNIRQCDGQWCELNINNTRGWLQQPQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKVK 184
>gi|325291523|ref|YP_004277387.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
gi|325059376|gb|ADY63067.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
Length = 179
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 107/177 (60%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ I F +A + PLPRFV++K+ R N RIGP Y V
Sbjct: 3 MRSVVSMVCIALSLGLFGVANEAMAQGAAKGASGLPLPRFVSLKSKRVNMRIGPSTDYAV 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
Y+ G+PVE+++EYENWR+IRD DGT GW+N++LLSG+R+A+ +PW R +Y+N
Sbjct: 63 SWMYMKSGMPVEIIQEYENWRRIRDADGTEGWVNQALLSGERTAVAAPWMRGKGKDVYVN 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + + ++A++EPGV+ I EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 123 MRRDAQSGASVIARLEPGVVFRIGECNGDWCRAEAGQASGWVSQGEIWGAYPGEAFK 179
>gi|153008071|ref|YP_001369286.1| hypothetical protein Oant_0735 [Ochrobactrum anthropi ATCC 49188]
gi|151559959|gb|ABS13457.1| protein of unknown function DUF1058 [Ochrobactrum anthropi ATCC
49188]
Length = 190
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILAL----------SHEKEIFEKKPLPRFV 58
+Y + +++ L LA +F LAP+ A + P+PRFV
Sbjct: 1 MYRVLSQRFWIATL-----GFLAFFFILAPLGASHRHAARAAEPAGTTVGASGLPVPRFV 55
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++K +R N RIGPG Y V ++ GLPVE+++EY+NWR+IRD DGT GW+ +SLLSGK
Sbjct: 56 SLKPARVNLRIGPGRDYAVSWLFMKAGLPVEIIQEYDNWRRIRDADGTEGWVYQSLLSGK 115
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
R+AI +PW + N IN+ + S + A++EPGV+ T+REC+G+WC GW
Sbjct: 116 RTAITAPWLK-NNQGSMINMRRDAADTSGLAAEIEPGVVGTVRECTGQWCRVDMGGVRGW 174
Query: 179 IKKQKIWGIYPGEVFK 194
IK+ +WG+YPGEVF
Sbjct: 175 IKQSDLWGVYPGEVFD 190
>gi|159184151|ref|NP_353113.2| hypothetical protein Atu0078 [Agrobacterium tumefaciens str. C58]
gi|159139486|gb|AAK85898.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 179
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +R + + + +L + +A K PLPRFV++K+ R N RIGP
Sbjct: 1 MGMRSVVSIV---CIALSLGLLGAAGEAMAQGAAKGA-SGLPLPRFVSLKSKRVNMRIGP 56
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
Y V YL G+PVE+++EYENWR+IRD DGT GW+N++LLSG+R+A+ +PW R
Sbjct: 57 STDYAVSWMYLKSGMPVEIIQEYENWRRIRDADGTEGWVNQALLSGERTAVAAPWMRGKG 116
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+Y+N+ ++ + + A++EPGV+ I EC+G+WC GW+ + +IWG YPGE
Sbjct: 117 KEVYVNMRREAQSGAAVTARLEPGVVFRIGECNGDWCRAEAGQASGWVSQGEIWGAYPGE 176
Query: 192 VFK 194
FK
Sbjct: 177 AFK 179
>gi|319406530|emb|CBI80172.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 185
Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE-----IFEKKPLPRFVTIKASRANSR 68
++ ++ L L L L+ SH + PLPRF +IK++R N R
Sbjct: 1 MKHFIWFRFFVLLSCILMTGGLLFVSLSFSHPQTLNQDLGPSGLPLPRFASIKSARVNMR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW +
Sbjct: 61 VGPGNNYSIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + L K P IVA++EP ++ TIR+C+G WC + GW+ + ++WGIY
Sbjct: 121 DKTHRLM--LRKNPGDNEKIVAEIEPNIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|256112500|ref|ZP_05453421.1| hypothetical protein Bmelb3E_07438 [Brucella melitensis bv. 3 str.
Ether]
gi|265993936|ref|ZP_06106493.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262764917|gb|EEZ10838.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 181
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPDRVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 MIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|256060135|ref|ZP_05450317.1| hypothetical protein Bneo5_07231 [Brucella neotomae 5K33]
gi|261324113|ref|ZP_05963310.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306842714|ref|ZP_07475357.1| Bacterial SH3-like region [Brucella sp. BO2]
gi|261300093|gb|EEY03590.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306287160|gb|EFM58662.1| Bacterial SH3-like region [Brucella sp. BO2]
Length = 181
Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 113/180 (62%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + ++H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|195970216|ref|NP_384279.2| hypothetical protein SMc02848 [Sinorhizobium meliloti 1021]
gi|187904126|emb|CAC41560.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 223
Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 2/184 (1%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
S +R ++ ++ ++ L + L A + + PLPRFV++KA N RIG
Sbjct: 42 SFVMRHFISRVSTLTMAALLGV--VLTAGTAQAQAAKGPSGLPLPRFVSLKAKSVNLRIG 99
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 100 PSVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTALAAPWMRSK 159
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+++N+ + P + IVA+VEPGV+L I EC+G+WC EGWI + +IWG YPG
Sbjct: 160 GEGVFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPG 219
Query: 191 EVFK 194
E FK
Sbjct: 220 EAFK 223
>gi|49474949|ref|YP_032990.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
gi|49237754|emb|CAF26946.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
Length = 186
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 5/185 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE---IFEKKPLPRFVTIKASRANSR 68
+ ++ +L S ++ + + + PLPRF +IK +R N R
Sbjct: 1 MQHSRWFRFLLLASCFLMAEVFVFSSLDFLHAQTLNQNLGPSGLPLPRFASIKPTRVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y ++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSDYAIIFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L K P + +VA+VEP V+ IR C+G WC + GW+ + ++WGIY
Sbjct: 121 DKTKRLI--LRKSPADNAEVVAEVEPNVIGNIRHCNGYWCELNINNIRGWVYQSQLWGIY 178
Query: 189 PGEVF 193
P E
Sbjct: 179 PDEKI 183
>gi|328541689|ref|YP_004301798.1| Bacterial SH3-like region [polymorphum gilvum SL003B-26A1]
gi|326411441|gb|ADZ68504.1| Bacterial SH3-like region [Polymorphum gilvum SL003B-26A1]
Length = 171
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 3/174 (1%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L L LA+ P LA + P+PRFV++K+ R N R+GP + V T
Sbjct: 1 MLLRFLTVALAVLTLAQPALAQATRTGTASGLPVPRFVSLKSDRVNVRMGPSRDHEVAWT 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y+ GLPVE+V+E+ENWR++RD++G GW+ SLLSG+R+ +V+PW L
Sbjct: 61 YVQAGLPVEIVQEFENWRRVRDWEGKEGWLFHSLLSGRRTGLVTPWESADTA---TPLRA 117
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ IVA ++ VL +R+C G WC GWI + +++G+YP E
Sbjct: 118 SARSDAPIVAYLQSKVLAEVRQCRGGWCRVEGAGYRGWIDQTRLFGVYPDETID 171
>gi|23503023|ref|NP_699150.1| hypothetical protein BR2176 [Brucella suis 1330]
gi|161620084|ref|YP_001593971.1| hypothetical protein BCAN_A2218 [Brucella canis ATCC 23365]
gi|163844188|ref|YP_001628593.1| hypothetical protein BSUIS_A2013 [Brucella suis ATCC 23445]
gi|254700807|ref|ZP_05162635.1| hypothetical protein Bsuib55_08102 [Brucella suis bv. 5 str. 513]
gi|254705175|ref|ZP_05167003.1| hypothetical protein Bsuib36_14886 [Brucella suis bv. 3 str. 686]
gi|254707308|ref|ZP_05169136.1| hypothetical protein BpinM_10125 [Brucella pinnipedialis
M163/99/10]
gi|254709151|ref|ZP_05170962.1| hypothetical protein BpinB_02557 [Brucella pinnipedialis B2/94]
gi|254713424|ref|ZP_05175235.1| hypothetical protein BcetM6_08732 [Brucella ceti M644/93/1]
gi|254716219|ref|ZP_05178030.1| hypothetical protein BcetM_07256 [Brucella ceti M13/05/1]
gi|254718214|ref|ZP_05180025.1| hypothetical protein Bru83_01471 [Brucella sp. 83/13]
gi|256030676|ref|ZP_05444290.1| hypothetical protein BpinM2_08482 [Brucella pinnipedialis
M292/94/1]
gi|256158677|ref|ZP_05456560.1| hypothetical protein BcetM4_07391 [Brucella ceti M490/95/1]
gi|256254081|ref|ZP_05459617.1| hypothetical protein BcetB_07233 [Brucella ceti B1/94]
gi|256370571|ref|YP_003108082.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|261217993|ref|ZP_05932274.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221222|ref|ZP_05935503.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314790|ref|ZP_05953987.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316650|ref|ZP_05955847.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321157|ref|ZP_05960354.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751315|ref|ZP_05995024.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755880|ref|ZP_05999589.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265983171|ref|ZP_06095906.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265987722|ref|ZP_06100279.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997183|ref|ZP_06109740.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851401|ref|ZP_06792074.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
gi|23349065|gb|AAN31065.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336895|gb|ABX63200.1| protein of unknown function DUF1058 [Brucella canis ATCC 23365]
gi|163674911|gb|ABY39022.1| protein of unknown function DUF1058 [Brucella suis ATCC 23445]
gi|256000734|gb|ACU49133.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|260919806|gb|EEX86459.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923082|gb|EEX89650.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293847|gb|EEX97343.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295873|gb|EEX99369.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303816|gb|EEY07313.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741068|gb|EEY28994.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745633|gb|EEY33559.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551651|gb|EEZ07641.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659919|gb|EEZ30180.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264661763|gb|EEZ32024.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294819990|gb|EFG36989.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
Length = 181
Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|222147254|ref|YP_002548211.1| hypothetical protein Avi_0315 [Agrobacterium vitis S4]
gi|221734244|gb|ACM35207.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 179
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 18 MPKILQNSLI--FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
MP + S + F A+ A + PLPRFVT+K++R N RIGP Y
Sbjct: 1 MPNGFKRSCLIPFIAALCVIWAGAAVAQGPTKGMSGLPLPRFVTLKSARVNLRIGPSTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
Y GLPVE+++EY+NWR+IRD DGT GW+N++LLSG+RSA+ +PW + + IY
Sbjct: 61 ATSWMYTRAGLPVEIIQEYDNWRRIRDADGTEGWVNQTLLSGERSALAAPWMKGKGDNIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+N+ ++ + +VAK++PGVL+ + EC+G WC T+GW+ + +IWG YPGE FK
Sbjct: 121 VNMRREGQAGAGVVAKLQPGVLIKLLECNGNWCRAEVDGTKGWVAQGEIWGAYPGEAFK 179
>gi|121602573|ref|YP_989515.1| hypothetical protein BARBAKC583_1266 [Bartonella bacilliformis
KC583]
gi|120614750|gb|ABM45351.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 185
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ + S+ + ++ PLPRFV+IK +R N R+GPG Y
Sbjct: 8 RFFVLLTCVSITGGFLFASLTFSYAEVLNKNFGPSGLPLPRFVSIKPARVNVRVGPGSNY 67
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+V TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 68 AIVFTYQKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKRLM 127
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K P + +VA+VEP ++ IR+C G WC GW+ + ++WGIYPGE K
Sbjct: 128 --LRKTPTDNAPLVAEVEPNIIGNIRQCDGYWCELSIGKVRGWLHQTQLWGIYPGEKIK 184
>gi|158421861|ref|YP_001523153.1| hypothetical protein AZC_0237 [Azorhizobium caulinodans ORS 571]
gi|158328750|dbj|BAF86235.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 199
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Query: 4 HAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS 63
+ + R + +L+ L + LA +K P+PRFV++KA
Sbjct: 15 AKGRADMRITWRHL--SQARRALMALLMVTMLPGMALAADDDKGAGTGLPVPRFVSLKAD 72
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
R N R GP V + GLPVE+ E+E WR+IRD DG GW+ S+LSG+R+A+V
Sbjct: 73 RVNVRNGPNRDQDVAWIFTRAGLPVEITAEFETWRRIRDADGAEGWVYHSMLSGRRTALV 132
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+PW++ T I L KPD + VA++E VL TI+ C G+WC +G++++ K
Sbjct: 133 APWSKDTT----ITLRDKPDANARAVARLEANVLGTIKSCDGKWCRILGDGFDGYVEQNK 188
Query: 184 IWGIYPGEVFK 194
+WG+YP E
Sbjct: 189 LWGVYPNEKVD 199
>gi|225853600|ref|YP_002733833.1| hypothetical protein BMEA_A2236 [Brucella melitensis ATCC 23457]
gi|256045780|ref|ZP_05448658.1| hypothetical protein Bmelb1R_14840 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992196|ref|ZP_06104753.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|225641965|gb|ACO01879.1| protein of unknown function DUF1058 [Brucella melitensis ATCC
23457]
gi|263003262|gb|EEZ15555.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|326410175|gb|ADZ67240.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539893|gb|ADZ88108.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 181
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 MIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|319407998|emb|CBI81652.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 185
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEI-----FEKKPLPRFVTIKASRANSRIGPGIMY 75
L L +L L LSH + PLPRF +IK +R N R+GPG Y
Sbjct: 8 RFSTFLSCVLITGEFLFSSLVLSHAQASNQNLGPSGLPLPRFASIKPARVNVRVGPGSNY 67
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 68 PIIYTYQKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKRLM 127
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + P + ++A+VEP ++ IR+C G WC + GW+ + ++WGIYPGE K
Sbjct: 128 V--RQTPTDNAKLLAEVEPNIIGNIRQCDGHWCELDIRNIRGWLHQTQLWGIYPGEKIK 184
>gi|254690308|ref|ZP_05153562.1| hypothetical protein Babob68_09067 [Brucella abortus bv. 6 str.
870]
gi|254694796|ref|ZP_05156624.1| hypothetical protein Babob3T_09063 [Brucella abortus bv. 3 str.
Tulya]
gi|260755847|ref|ZP_05868195.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|261215122|ref|ZP_05929403.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260675955|gb|EEX62776.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260916729|gb|EEX83590.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 181
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|256258561|ref|ZP_05464097.1| hypothetical protein Babob9C_14672 [Brucella abortus bv. 9 str.
C68]
gi|260884872|ref|ZP_05896486.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260874400|gb|EEX81469.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 181
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|260169580|ref|ZP_05756391.1| hypothetical protein BruF5_14716 [Brucella sp. F5/99]
Length = 181
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + AP + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|307306338|ref|ZP_07586082.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
gi|307319225|ref|ZP_07598654.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306895061|gb|EFN25818.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306902180|gb|EFN32777.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
Length = 179
Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R ++ ++ ++ L + L A + + PLPRFV++KA N RIGP +
Sbjct: 1 MRHFISRVSTLTMAALLGV--VLTAGTAQAQAAKGPSGLPLPRFVSLKAKSVNLRIGPSV 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 59 DYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTALAAPWMRSKGEG 118
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+++N+ + P + IVA+VEPGV+L I EC+G+WC EGWI + +IWG YPGE F
Sbjct: 119 VFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPGEAF 178
Query: 194 K 194
K
Sbjct: 179 K 179
>gi|62291012|ref|YP_222805.1| hypothetical protein BruAb1_2149 [Brucella abortus bv. 1 str.
9-941]
gi|82700923|ref|YP_415497.1| hypothetical protein BAB1_2177 [Brucella melitensis biovar Abortus
2308]
gi|254731337|ref|ZP_05189915.1| SH3-like region [Brucella abortus bv. 4 str. 292]
gi|260759070|ref|ZP_05871418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|62197144|gb|AAX75444.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82617024|emb|CAJ12133.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|260669388|gb|EEX56328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
Length = 181
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + P + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 122 IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 181
>gi|254696425|ref|ZP_05158253.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
gi|260760796|ref|ZP_05873139.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260671228|gb|EEX58049.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 181
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGPGIM 74
+ SL F L + P + +H +P+PRF ++K +R N R+GPG
Sbjct: 3 AIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRD 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW + +
Sbjct: 63 YAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGT 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I + ++ + + A+VEPGV+ T+REC+G+WC GWIKK ++WG+YPGEVF
Sbjct: 122 IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKKSELWGVYPGEVFD 181
>gi|92115676|ref|YP_575405.1| hypothetical protein Nham_0044 [Nitrobacter hamburgensis X14]
gi|91798570|gb|ABE60945.1| protein of unknown function DUF1058 [Nitrobacter hamburgensis X14]
Length = 185
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 6/181 (3%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEI--FEKKPLPRFVTIKASRANSRIGPG 72
R M K L S++F A+ + + + P+PR+V++K+ N R GP
Sbjct: 8 RVMMVKRLFASMVFAAAMLNAVGIEATANAKDSALSASGLPVPRYVSLKSDHVNVRAGPT 67
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
V Y GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ ++
Sbjct: 68 KDNDVAWVYTKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKHKDD-- 125
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
LY D +S + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 126 --LAQLYSSADTESAVAARLQAGVVAQVKHCAAGWCHVAGDGFDGWIQQQRLWGVYADEK 183
Query: 193 F 193
Sbjct: 184 I 184
>gi|149203170|ref|ZP_01880141.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
gi|149143716|gb|EDM31752.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
Length = 167
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ S + L I L P+ A+ E+ PLPRFV++KAS N R GP + + + +
Sbjct: 3 VMKSGLVALVIMMGLGPVAAMGQERGPVTNLPLPRFVSMKASEGNVRRGPSLTHRIDWIF 62
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ +LLSG R+A V ++L K
Sbjct: 63 KRRDMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVRTASV--------EVEMLDLLAK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
PD +S++VA++E GV+ + EC +WC +GW K +WG+ GE F+
Sbjct: 115 PDAKSMVVARLEQGVIARLEECQPDWCAVSAGGYDGWAPKSALWGVMDGETFE 167
>gi|222084348|ref|YP_002542877.1| hypothetical protein Arad_0203 [Agrobacterium radiobacter K84]
gi|221721796|gb|ACM24952.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 179
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 74/176 (42%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEK-EIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L++ +F + + A + + + PLPRFVT+K+ R N R+GP Y V
Sbjct: 4 KVLKSCAVFAIGLMMAGATADLAAAQAAKGPSGLPLPRFVTLKSKRVNLRVGPSADYAVS 63
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
YL +GLPVE+++EY+NWR++RD DGT GW+N+SLLSG+RSA+ +PW + +++N+
Sbjct: 64 WLYLKQGLPVEIIQEYDNWRRVRDADGTEGWVNQSLLSGQRSALAAPWMKGKGKAVFVNM 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++AK++PGV++ +REC+G+WC TEGW+ + +IWG YPGE FK
Sbjct: 124 RRDAQPSGTVIAKLQPGVMMNVRECTGDWCLATADGTEGWVAQSEIWGAYPGEAFK 179
>gi|110636266|ref|YP_676474.1| hypothetical protein Meso_3942 [Mesorhizobium sp. BNC1]
gi|110287250|gb|ABG65309.1| protein of unknown function DUF1058 [Chelativorans sp. BNC1]
Length = 185
Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF--------EKKPLPRFVTIKASRANSRI 69
M K+L+ + + +L + L A+S ++ PLPRFV++K+ R N R+
Sbjct: 1 MFKVLKKTRLLSLVLATALTAFPAISQDQAQVGAALKRGPSGLPLPRFVSLKSGRVNMRV 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
GPG Y V+ YL GLPVE+++EY+NWR++RD DGT GWIN++LLSG+R+A+V+PW +
Sbjct: 61 GPGTQYAVMWLYLKPGLPVEIIQEYDNWRRVRDADGTEGWINQALLSGQRTAVVAPWFKG 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
N + L KP+ + VAKVEPG++ + C+G WC EGW+ + IWG+YP
Sbjct: 121 KENA-AVPLVAKPEEGAREVAKVEPGLVGEVAMCNGSWCRINFAGHEGWMDQGAIWGVYP 179
Query: 190 GEVFK 194
GE K
Sbjct: 180 GEAIK 184
>gi|90420509|ref|ZP_01228416.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335237|gb|EAS48990.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 181
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + E K PLPR+V++KASR N RIGPG Y V YL +GLPVEV++EYE WR+
Sbjct: 29 AAHAVEVGPVSKLPLPRYVSLKASRVNLRIGPGRDYPVTWLYLKEGLPVEVIQEYELWRR 88
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
IRD +GT GW+ SLLSG R++I +PW R I+++ P + +VA++EPGV+
Sbjct: 89 IRDSEGTEGWVYHSLLSGDRTSIAAPWLRGKAT--MIDIHNSPATDAPLVARIEPGVVAG 146
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ C+ WC D +G++++Q+IWG+YP E F+
Sbjct: 147 VKTCTAGWCELKVADRDGYVRQQEIWGVYPDERFE 181
>gi|114706968|ref|ZP_01439867.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
gi|114537518|gb|EAU40643.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ P+ + + E + K PLPR+V++K+SR N R GPG + V YL GLPVE++
Sbjct: 38 VSLTTMPLPSAAVEVGRYSKLPLPRYVSLKSSRVNLRNGPGREHKVNWLYLKSGLPVEII 97
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+E+++WR+IRD DGT GW+ SLLSG+R+AI +PW R + ++++ P + ++ +
Sbjct: 98 QEFDHWRKIRDADGTEGWVYHSLLSGERTAIAAPWLRGKDA--LVDVHMSPAKDAPLIVR 155
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+EPGV+ + +C+ WC + G++++ +IWG+YP E +
Sbjct: 156 MEPGVVSKVEKCNAGWCEIAVSERVGFVEQNEIWGVYPDEPIE 198
>gi|163757762|ref|ZP_02164851.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
gi|162285264|gb|EDQ35546.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAP-------ILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ + + + L+ P + + PLPRFV++KA+R N R
Sbjct: 2 RRLSLLAASCLVLAATTIVPSGPFCPSGVGVAHAQSAGKGPSGLPLPRFVSLKATRVNLR 61
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
IGPG Y V Y G+P+EV++EY+NWR++RD +GT GW+ +SLLSG+R+A V+PW
Sbjct: 62 IGPGRDYAVAWLYTRPGVPMEVIQEYDNWRRVRDAEGTEGWVYQSLLSGERTATVAPWKA 121
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + +++++ + +VA++EPGV++ ++ C GEWC +G++ + +IWG Y
Sbjct: 122 ASGKDEFTSMHREARANARVVARLEPGVVVKVKACDGEWCEASAEGMDGYVAQSQIWGAY 181
Query: 189 PGEVFK 194
PGE F+
Sbjct: 182 PGEAFR 187
>gi|298290257|ref|YP_003692196.1| hypothetical protein Snov_0242 [Starkeya novella DSM 506]
gi|296926768|gb|ADH87577.1| protein of unknown function DUF1058 [Starkeya novella DSM 506]
Length = 211
Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + P+PRFV++KA + N R GP + V + GLPVE+ E+E WR+I
Sbjct: 62 AANGPTGRASGLPVPRFVSLKADKVNVRSGPTRDHAVAWVFTRAGLPVEITAEFETWRRI 121
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW+ S+LSG+R+A+VSPW P LY PD S + AK+EPGVL +
Sbjct: 122 RDSDGAEGWVYHSMLSGRRTALVSPWKAGEPTP----LYADPDKSSAVKAKLEPGVLGKV 177
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C G+WC + +G++ ++++WG+YPGE +
Sbjct: 178 EHCDGKWCRFFENGFDGFVAQERLWGVYPGEKIE 211
>gi|86747741|ref|YP_484237.1| hypothetical protein RPB_0615 [Rhodopseudomonas palustris HaA2]
gi|86570769|gb|ABD05326.1| Protein of unknown function DUF1058 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
L+F A+ AP A P+PR+V++K+ N RIGP V Y
Sbjct: 8 AGLLFAGAMVGVAAPSFAAKDSPLSTSGLPVPRYVSLKSDHVNVRIGPTKDNDVAWVYTR 67
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
GLPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+++ ++ LY+
Sbjct: 68 AGLPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKDKDE----LATLYESAS 123
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
S + A+++ GV+ I+ C WC +GWI+KQ++WG+Y E K
Sbjct: 124 TDSAVAARLQAGVVAQIKRCDAVWCRIAGQGFDGWIEKQRLWGVYADEQVK 174
>gi|114765169|ref|ZP_01444313.1| hypothetical protein 1100011001332_R2601_15145 [Pelagibaca
bermudensis HTCC2601]
gi|114542444|gb|EAU45471.1| hypothetical protein R2601_15145 [Roseovarius sp. HTCC2601]
Length = 166
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +LI L + A + E+ PLPR+V++KAS N R GP + + +
Sbjct: 1 MRMAALIVGLMAALLTGTVSAATDERGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWI 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y + +P+E+ EY +WR++RD DG GW++ SLLSG R+ +V + L+
Sbjct: 61 YTRRDMPLEITAEYGHWRRVRDADGAGGWVHYSLLSGVRTVLV--------QQDMLELHG 112
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+PD + + AK+ GV+ + +C WC +GW K +WG+ P E+
Sbjct: 113 RPDAAAPVNAKLALGVVARLGKCETAWCELSAGGYDGWAPKSALWGVAPDEI 164
>gi|17988236|ref|NP_540870.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|17984002|gb|AAL53134.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
Length = 167
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/156 (44%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
A + +P+PRF ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR
Sbjct: 13 AAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWR 72
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+IRD DGT GW+ +SLLSGKR+AI +PW + + I + ++ + + A+VEPGV+
Sbjct: 73 RIRDADGTEGWVYQSLLSGKRTAITAPWLK-NDKGTMIAMRREAAETAGVTAEVEPGVVG 131
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 132 TVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVFD 167
>gi|182677505|ref|YP_001831651.1| hypothetical protein Bind_0510 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633388|gb|ACB94162.1| protein of unknown function DUF1058 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 192
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
L P + + + PLPR+V++K+ R N R GP + + GLPVE+ E
Sbjct: 36 LCLVPSPSPAQQVGTASGLPLPRYVSLKSDRVNLREGPSKDHRTTWVFQRAGLPVEITAE 95
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+E WR+IRD +G+ GW+ SLLSG+R+A+++PW + P LY+KP S + AK++
Sbjct: 96 FETWRKIRDSEGSEGWVLHSLLSGRRTALIAPWKKGEEFP----LYEKPSDHSALRAKLQ 151
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
V+ +R C G WC +G++++ +WG+YP E +
Sbjct: 152 ANVIAGVRRCDGTWCRLTGDGFDGYLQQALLWGVYPDEKIE 192
>gi|163737042|ref|ZP_02144460.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
gi|161389646|gb|EDQ13997.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
Length = 254
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
Y+ L + +A+ L P+ A E+ PLPRFV++KA+ N R GP + +
Sbjct: 84 YLRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTH 143
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++
Sbjct: 144 KIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGARTVLI--------EEDM 195
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 196 LTVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|163740534|ref|ZP_02147928.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
gi|161386392|gb|EDQ10767.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
Length = 254
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
Y+ L + +A+ L P+ A E+ PLPRFV++KA+ N R GP + +
Sbjct: 84 YLRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTH 143
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++
Sbjct: 144 KIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGARTVLI--------EEDM 195
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 196 LTVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|299133360|ref|ZP_07026555.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
gi|298593497|gb|EFI53697.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
Length = 185
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+R + +++ LA + + + + P+PR+V++K+ N R+GP
Sbjct: 8 GMRMMELRSSIWAMLMALATWGMTGGTGHAAKDVQTTSGLPVPRYVSLKSDHVNVRVGPT 67
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
V Y GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V+ +
Sbjct: 68 KDQDVSWIYTRAGLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVTMKTKGE-- 125
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L P S + A+++ GV+ ++ C+G+WC +GWI++Q++WG+Y E
Sbjct: 126 --LAALRDDPSEDSAVSARLQAGVIAQVKRCTGKWCRITGEGFDGWIEQQRLWGVYADEK 183
Query: 193 F 193
Sbjct: 184 V 184
>gi|126732185|ref|ZP_01747986.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
gi|126707267|gb|EBA06332.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
Length = 164
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI + + + +L+ E+ PLPRFV++KA+ N R GP + + + Y +
Sbjct: 4 LILSAILSLNVLATASLAAERGPVTNLPLPRFVSMKAAEVNVRRGPSLSHRIDWVYKRRD 63
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+P+E+ EY +WR++RD DG GW++ +LLSG R+ IV + + L+K+P+
Sbjct: 64 MPLEITAEYGHWRRVRDRDGAGGWVHYALLSGVRTVIV--------DQDMLALHKRPEAD 115
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
S + A++E GV+ + EC +WC GW K +WG+ E+
Sbjct: 116 SNVTARLEMGVIARLGECGIDWCELSADGYRGWADKSALWGVGLDEI 162
>gi|307943429|ref|ZP_07658773.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307773059|gb|EFO32276.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 169
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/159 (40%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 37 APILALSHEKEI-FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
P LA + + PLPRFV++K+ R N R+GP + + T++ GLPVE+++E++
Sbjct: 15 VPELAQAQATKTGPSGYPLPRFVSLKSDRVNVRLGPSREHDIAWTFVKSGLPVEIIQEFD 74
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
NWR+IRD++G GW+ SLLSG+R+A+V+PW + P L ++ +IIVA+++P
Sbjct: 75 NWRRIRDWEGKEGWVFHSLLSGRRTALVTPWEKSNRTP----LRQRSKSDAIIVAELDPF 130
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL T+ ECSG WC EGW+ + +++G+YP E+F+
Sbjct: 131 VLATVTECSGGWCKVQGEGFEGWLDQTRLFGVYPDELFE 169
>gi|319779756|ref|YP_004139232.1| hypothetical protein Mesci_0007 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165644|gb|ADV09182.1| protein of unknown function DUF1058 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 186
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A S PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLTLSAAFLGALLYSPLTAAQSAAAPAQSVVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+SLLSG+R+AIV+PW R
Sbjct: 66 ANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQSLLSGRRTAIVAPWQRGKGT 125
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL PD + +VA +EPGV+ TI+ C G+WC GW+ + +WG YPGE
Sbjct: 126 --RINLLNSPDKDARVVAMIEPGVMGTIKSCDGQWCEMTFEGHTGWLAQSVVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|209883648|ref|YP_002287505.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
gi|209871844|gb|ACI91640.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
Length = 177
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R + +++ LA + + + + P+PR+V++K+ N R GP
Sbjct: 1 MRMMELRSSIWAMLLALATWGMTGGTGQAAKDVQTTSGLPVPRYVSLKSDHVNVRGGPTK 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
V Y GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V N+
Sbjct: 61 DQDVSWIYTRAGLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVIMKNKDE--- 117
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
L +PD +S + A+++ GV+ ++ C+G WC +GWI++Q++WG+Y E
Sbjct: 118 -LAVLRDRPDEESAVAARLQAGVIAQVKRCTGTWCRIAGDGFDGWIRQQRLWGVYADEKL 176
>gi|83951771|ref|ZP_00960503.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
gi|83836777|gb|EAP76074.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
Length = 167
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + +AI L+ +A S ++ PLPRFV++K S R GP + +
Sbjct: 1 MRHVMLTA--ALVAILPILSASVAASQDRGPVTNLPLPRFVSMKTSEGYVRRGPSRTHRI 58
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ +P+E+ E+ +WR++RD DG GW++ SLLSG R+ +V +
Sbjct: 59 DWIFKQPNIPLEITAEHGHWRRVRDRDGAGGWMHYSLLSGARTVLV--------EQDMLQ 110
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K+PD ++ IVA++E GV+ IRECS +WC +GW K +WG+ PGE+
Sbjct: 111 LRKQPDPKAPIVAQLELGVVARIRECSAQWCRLAVAGYKGWAPKSALWGVKPGEILD 167
>gi|255264111|ref|ZP_05343453.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
gi|255106446|gb|EET49120.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
Length = 166
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ + E+ P+PRFV++KAS N R GP + + + + + +P+E+ EY NWR+
Sbjct: 20 VCSAQERGPVTNLPIPRFVSLKASEGNVRRGPSLSHRIDWVFKRRDMPLEITAEYGNWRR 79
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+RD +G GW++ SLLSG R+ I+ + + LY +PD + A++E GV+
Sbjct: 80 VRDREGQGGWVHYSLLSGTRTVII--------DADLLTLYARPDPNAPENARLEAGVVAR 131
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ EC WC GW K +WG+ P E+
Sbjct: 132 LGECQPAWCRLNAGGYRGWAPKSALWGVKPSEL 164
>gi|260432586|ref|ZP_05786557.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416414|gb|EEX09673.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 212
Score = 197 bits (500), Expect = 8e-49, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 28 FTLAIYFYLAPILALSHE-KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
F A + A + E + P+PR+V++KA+ N R GP + + + + +G+
Sbjct: 53 FVCAFAAVVFAWGAQAQENRGSVTNLPIPRYVSMKAAEGNVRRGPSLTHRIDWVFKRRGM 112
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P++VV EY NWR+++D DG GW++ +LLSG R+ +V + + PD +
Sbjct: 113 PLQVVAEYGNWRKVQDRDGAGGWVHYALLSGVRTVLV--------ESDMLPVRTSPDPNA 164
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ A E GV+ + C+ +WC GW K +WG+ P E+
Sbjct: 165 PVKAHFESGVVARLGSCTIDWCRISAGGYGGWAPKSSLWGVDPNEI 210
>gi|260461967|ref|ZP_05810212.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
gi|259032214|gb|EEW33480.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
Length = 186
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLVLSAAFLGTLLYSPLAAAQGAAAPAQGAVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+SLLSG+R+AI++PW R
Sbjct: 66 ANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGA 125
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL PD + ++A VEPGV+ I+ C G+WC GW+ + +WG YPGE
Sbjct: 126 Q--INLLNSPDKDARVIAIVEPGVMGMIKSCDGQWCEMTLGGHTGWLAQSTVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|163744590|ref|ZP_02151950.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
gi|161381408|gb|EDQ05817.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
Length = 169
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M S + A+ A + PLPRFV++KAS N R GP + + +
Sbjct: 1 MITAFLRSTLLVGALLLAQMSPGATEEARGQVTNLPLPRFVSLKASEGNVRRGPSLSHRI 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
Y + LP+ + E+ +WR+I D DG GW++ SLLSG R+ +V +
Sbjct: 61 DWVYKRRDLPLRITAEHGHWRRIEDRDGMGGWVHYSLLSGTRTVLV--------EQDMLQ 112
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L+ PD ++ +VA++E GV+ + EC+ EWC + GW K ++WG+ P E+
Sbjct: 113 LHVNPDPKAAVVARLELGVVARLGECTLEWCELRSGGFTGWAPKVRLWGVGPKEL 167
>gi|13474642|ref|NP_106211.1| hypothetical protein mll5573 [Mesorhizobium loti MAFF303099]
gi|14025396|dbj|BAB51997.1| mll5573 [Mesorhizobium loti MAFF303099]
Length = 186
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A + PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V YL GLP+EVV+E++ WR++RD DG+ GWIN+SLLSG+R+AI++PW R
Sbjct: 66 ANYSVDWMYLKAGLPMEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGA 125
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL K PD + +VA VEPGV+ TI+ C G+WC GW+ + +WG YPGE
Sbjct: 126 Q--INLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEMTLEGHTGWLAQAAVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|146337239|ref|YP_001202287.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146190045|emb|CAL74037.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 173
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
++ + + A P+PR+V++K+ N R GP V Y
Sbjct: 7 GAVAVLVVCLLDMIGSAAAKDSVLTTSGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVYTR 66
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
GLPVE+ EYENWR++RD +G+ GW+ SLLSG+R+A+V+ N+ P +Y+ D
Sbjct: 67 SGLPVEITAEYENWRRVRDSEGSEGWVYHSLLSGRRTAVVTMKNKDDLAP----IYESAD 122
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
S + A+++ GV+ +++C WC EGWI++Q++WG+Y E
Sbjct: 123 ATSAVTARLQAGVVAQVKKCGNGWCRVLGNGFEGWIQQQRLWGVYADEQV 172
>gi|99080320|ref|YP_612474.1| hypothetical protein TM1040_0479 [Ruegeria sp. TM1040]
gi|99036600|gb|ABF63212.1| protein of unknown function DUF1058 [Ruegeria sp. TM1040]
Length = 200
Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYL---APILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ LR + ++ + A AP A + PLPR+V++KA+ N
Sbjct: 22 RVALRGALCALVMGGFFVSTAPVATAQESAPERAAAQTLGPVTNLPLPRYVSMKAAEGNV 81
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GP + + + + +G+P+EV EY +WR++RD DG GW++ +LLSG R+ +V
Sbjct: 82 RRGPSLNHRIDWVFKRRGMPLEVTAEYGHWRRVRDRDGQGGWVHYALLSGVRTVLV---- 137
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ + +P + VA E GV+ + C+ +WC GW K +WG+
Sbjct: 138 ----EQDLVQVRARPQEDAPAVAAFELGVVAQLGACTRDWCEITAGGHSGWTHKDNLWGV 193
Query: 188 YPGEV 192
P E+
Sbjct: 194 DPDEL 198
>gi|254504542|ref|ZP_05116693.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440613|gb|EEE47292.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 156
Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats.
Identities = 61/159 (38%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+AP + P+PRFV++K+ R N R+GP + + T++ GLPVE+++E+E
Sbjct: 1 MAPPVFAQGTTTGATGLPVPRFVSLKSDRVNVRLGPSREHDISWTFVQSGLPVEIIQEFE 60
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
NWR+IRD++G GW+ SLLSG+R+A+V+PW R P L + + IVA++EP
Sbjct: 61 NWRRIRDWEGKQGWVFHSLLSGRRTALVTPWERDNRTP----LRARSQSDADIVAELEPF 116
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL + EC+G WC + GW+ + +++G+YP E+ +
Sbjct: 117 VLTAVGECAGGWCRVSGEEFNGWLDQTRLFGVYPDELIE 155
>gi|91974700|ref|YP_567359.1| hypothetical protein RPD_0218 [Rhodopseudomonas palustris BisB5]
gi|91681156|gb|ABE37458.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB5]
Length = 174
Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+++F AI AP LA P+PR+V++K+ N RIGP V Y
Sbjct: 8 AAVLFAGAITGAAAPALAAKDSPLSASGLPVPRYVSLKSDHVNVRIGPTKDNDVAWVYTR 67
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
GLPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+++ ++ LY+
Sbjct: 68 AGLPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKDKDE----LATLYEAAS 123
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
S + A+++ GV+ I+ C WC +GWI+KQ++WG+Y E K
Sbjct: 124 TGSAVAARLQAGVVAQIKRCDPNWCRIIGSGFDGWIEKQRLWGVYADEQVK 174
>gi|323135706|ref|ZP_08070789.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
gi|322398797|gb|EFY01316.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
Length = 176
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+L+ + A +K P+PR+V++K+ R N R GP + + Y
Sbjct: 13 AALLIGAFCLIFATLAPAQEQQKGPVSNLPIPRYVSLKSDRVNVREGPSKEHPTLWIYTR 72
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
GLPVE+ E+E WR+IRD +G+ GW+ SLLSG+R+A+++PW ++
Sbjct: 73 AGLPVEITAEFETWRKIRDSEGSEGWVLHSLLSGRRTALIAPWKKEPQLLT-------AS 125
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ VAK+ PGV+ T+R C G+WC + +G+I+++ +WG+YPGE +
Sbjct: 126 DHTTPVAKLGPGVIGTLRGCDGKWCRLAGKEFDGYIQQENLWGVYPGEKVE 176
>gi|254460708|ref|ZP_05074124.1| aspartyl-trna synthetase [Rhodobacterales bacterium HTCC2083]
gi|206677297|gb|EDZ41784.1| aspartyl-trna synthetase [Rhodobacteraceae bacterium HTCC2083]
Length = 165
Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ A L A + E+ PLPRFV++KAS N R GP + + + +
Sbjct: 1 MKPIATLLRAGLLALVATTASASERGAVTNLPLPRFVSLKASEGNVRRGPSLTHRIDWVF 60
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ SLLSG R ++ + LY++
Sbjct: 61 KRRDMPLEITAEHGHWRRVRDRDGVGGWVHYSLLSGTRYVLI--------EQDMLALYQR 112
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
D + +VA++E GV+ + +C EWC + +GW KQ +WG+ P E+
Sbjct: 113 ADPATPVVARLELGVIARLGKCGPEWCRLSSSGYKGWAPKQSLWGVQPEEL 163
>gi|46202919|ref|ZP_00052391.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 197
Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+L + + AP A K K PLPR+ ++K +R N R GP + +
Sbjct: 15 AVLAALFAVLVPLTAESAPAPAPEVGKGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLW 74
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP--WNRKTNNPIYIN 137
+ +GLPVE+V E+E WR+IRD +GT GW+ SLLSG+R+A+V P R +
Sbjct: 75 VFQREGLPVEIVAEFETWRRIRDSEGTEGWVLHSLLSGRRTAVVIPPSGERADAAKATVP 134
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG------YNLDTEGWIKKQKIWGIYPGE 191
L + D QS A+++PGV+ +++ C+G WC D +G+I++ ++WG+YP E
Sbjct: 135 LTARADDQSAEQARLQPGVIGSVKSCTGTWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDE 194
Query: 192 VFK 194
+
Sbjct: 195 RVE 197
>gi|56695536|ref|YP_165886.1| hypothetical protein SPO0631 [Ruegeria pomeroyi DSS-3]
gi|56677273|gb|AAV93939.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 174
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHE--KEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ L+ LAP+ + E + P+PRFV++KA+ N R GP + +
Sbjct: 4 FNSFMRPLAAAILSALVTLAPVAPQAQEAVRGAVTNLPIPRFVSMKANEGNVRRGPSLTH 63
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + + +P+++ E+ +WR+++D DG GW++ +LLSG R+ +V
Sbjct: 64 RIDWVFKRRDMPLQITAEHGHWRKVQDRDGAGGWVHYALLSGVRTVLV--------EKDM 115
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ LY +PD S + A E GV+ + C+ +WC GW K+ +WG+ E+
Sbjct: 116 MPLYARPDPASQVAAHFEMGVVARLGTCTQDWCRISAGGYRGWAPKENLWGVGTDEI 172
>gi|27375878|ref|NP_767407.1| hypothetical protein blr0767 [Bradyrhizobium japonicum USDA 110]
gi|27349016|dbj|BAC46032.1| blr0767 [Bradyrhizobium japonicum USDA 110]
Length = 176
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + P+PR+V++K+ N R GP V Y GLPVE+ E+ENWR++
Sbjct: 27 AKDNTPQSASGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVYTRAGLPVEITAEFENWRRV 86
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD +G GW+ SLLSG+R+A+V+ ++ P +Y + D S + AK++ GV+ +
Sbjct: 87 RDSEGAEGWVYHSLLSGRRTAVVTMKHKDELAP----IYDRADPDSAVAAKLQAGVVTQV 142
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
++CS WC +GWI+++++WG+Y E
Sbjct: 143 KKCSANWCRVTGNGFDGWIQQERLWGVYSDEQV 175
>gi|217978629|ref|YP_002362776.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
gi|217504005|gb|ACK51414.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
Length = 177
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + P+PR+V++K+ R N R GP + +L GLPVE+ E+E WR++
Sbjct: 28 ARADQLGSASGLPIPRYVSLKSDRVNLREGPSKDHRTTWVFLRAGLPVEITAEFEIWRRV 87
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD +G+ GW+ SLLSG+R+A+V+PW + ++P +Y KPD ++ + A ++ V+ +
Sbjct: 88 RDSEGSEGWVLHSLLSGRRTALVTPWKKGADSP----VYDKPDAKAAVAANLQSNVIANV 143
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
R C G WC + +G+I++ +WG+YP E +
Sbjct: 144 RSCDGSWCRVWGDGFKGYIEQGDLWGVYPNEKIE 177
>gi|39933500|ref|NP_945776.1| hypothetical protein RPA0423 [Rhodopseudomonas palustris CGA009]
gi|192288858|ref|YP_001989463.1| hypothetical protein Rpal_0427 [Rhodopseudomonas palustris TIE-1]
gi|39647346|emb|CAE25867.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192282607|gb|ACE98987.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
TIE-1]
Length = 174
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L F A+ A P+PR+V++K+ N R+GP
Sbjct: 1 MTMKYLMAVTAFAGAMICAATFAHAGKESPLSASGLPVPRYVSLKSDHVNVRVGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVEV E+ENWR++RD +G GW+ SLLSG+R+A+V+ ++ P
Sbjct: 61 VAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVVTMKDKDGLAP--- 117
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
LY+ S +VA+++ GV+ ++ C +WC +GWI+K ++WG+Y E
Sbjct: 118 -LYESASSGSAVVARLQAGVVAQVKRCDMKWCRIVGSGFDGWIEKLQLWGVYADEQV 173
>gi|86136265|ref|ZP_01054844.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
gi|85827139|gb|EAQ47335.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
Length = 155
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+ + E+ PLPR+V++KA+ AN R GP + + + + +G+P+EV E+ +
Sbjct: 6 LASMVAASERGPVTNFPLPRYVSMKAAEANVRRGPSLTHRIDWVFKRRGMPLEVTAEFGH 65
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
WR++RD DG GW++ +LLSG R+ +V + L+ + D Q+ + A +E GV
Sbjct: 66 WRRVRDQDGAGGWVHYALLSGARTVLV--------QEDMLTLHARADEQAPVTAALEYGV 117
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + +C+ WC GW K K+WG+ P E+
Sbjct: 118 VARLGDCALTWCEVSVGGFSGWAPKSKLWGVMPDEI 153
>gi|316931654|ref|YP_004106636.1| hypothetical protein Rpdx1_0260 [Rhodopseudomonas palustris DX-1]
gi|315599368|gb|ADU41903.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
DX-1]
Length = 174
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L F A+ + A P+PR+V++K+ N R+GP
Sbjct: 1 MTMKYLMAVTAFAGAMTCAASFAQAGKDSPLSASGLPVPRYVSLKSDHVNVRVGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVEV E+ENWR++RD +G GW+ SLLSG+R+A+V ++ P
Sbjct: 61 VAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVVIMKDKDELAP--- 117
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
LY++ S +VA+++ GV+ +R C +WC +GWI+K ++WG+Y E
Sbjct: 118 -LYERATAGSAVVARLQAGVVAQVRRCDMKWCRIVGSGFDGWIEKLQLWGVYADEQV 173
>gi|149914051|ref|ZP_01902583.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
gi|149812335|gb|EDM72166.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
Length = 166
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 8/153 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
E+ PLPR+V++KAS N R GP + + + + + +P+E+ E+ +WR++R
Sbjct: 22 QQPERGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWVFKRRDVPLEITAEHGHWRRVR 81
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D DG GW++ SLLSG R+AIV ++L+ +PD + + A++E GV+ I+
Sbjct: 82 DRDGAGGWVHYSLLSGSRTAIV--------ERDMLDLHVRPDPSTRVTARLELGVIARIK 133
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C+ +WC +GW K IWG+ E+ +
Sbjct: 134 SCAPDWCEISAGGYDGWAPKSAIWGVGADEILE 166
>gi|85706632|ref|ZP_01037724.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
gi|85668690|gb|EAQ23559.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
Length = 167
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++++ L + F + P+ A + ++ PLPRFV++KA+ N R GP + + +
Sbjct: 2 TVMKSGLAAVFTLIF-VGPLAATAEDRGPVTNLPLPRFVSMKAAEGNVRRGPSLTHRIDW 60
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+ + +P+E+ E+ +WR++RD DG GW++ +LLSG R+A V ++L
Sbjct: 61 IFKRRDMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVRTASV--------EVEMLDLL 112
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+P+ +++VA++E GV+ + EC +WC +GW K +WG+ E F+
Sbjct: 113 VRPEPDTMVVARLEQGVIARVEECKPDWCAISAAGYDGWAPKTALWGVKASETFE 167
>gi|110680608|ref|YP_683615.1| hypothetical protein RD1_3438 [Roseobacter denitrificans OCh 114]
gi|109456724|gb|ABG32929.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 178
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHE---KEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + L+ S + L ++ A + P+PR+V++KAS AN R GP
Sbjct: 6 RPIIEYLRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANVRRGPS 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + + + + +P+ +V E+ +WR++ D DG GWI+ SLLSG R+ IV
Sbjct: 66 LTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVRTVIV--------- 116
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ +P+ ++ + A++E GV+ + +C+ +WC + GW K +WG+ P E+
Sbjct: 117 EETLTIHSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFRGWSPKTSLWGVRPDEL 176
>gi|118591454|ref|ZP_01548852.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
gi|118436126|gb|EAV42769.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
Length = 165
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 7/167 (4%)
Query: 30 LAIYFYLAPILALSHEKEI---FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ + L A + P+PRFV++K+ R N RIGP + + T++ GL
Sbjct: 1 MTLLCGLLATSATPQAQGTTTGASGLPVPRFVSLKSDRVNVRIGPSREHDIAWTFVQSGL 60
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVE+V E+ENWR+IRD++G GW+ +SLLS +R+A+V+PW + P+ D
Sbjct: 61 PVEIVGEFENWRRIRDWEGKQGWVFRSLLSSRRTALVTPWEKSDRTPLRARSRSDAD--- 117
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
IVA+++P VL TI EC+G WC + +GW+ + +++G+YP E+
Sbjct: 118 -IVAELDPFVLTTISECAGGWCRVNGENYDGWLDQTRLFGVYPDELI 163
>gi|154248046|ref|YP_001419004.1| hypothetical protein Xaut_4125 [Xanthobacter autotrophicus Py2]
gi|154162131|gb|ABS69347.1| protein of unknown function DUF1058 [Xanthobacter autotrophicus
Py2]
Length = 183
Score = 191 bits (484), Expect = 6e-47, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 6/181 (3%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILA--LSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
M + +L + L PI A ++ P+PRFV++KA + N R GP
Sbjct: 7 HLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNVRNGPNK 66
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ V + GLPVEV E+E WR+IRD DG GW+ S+LS +R+A+V+PW +
Sbjct: 67 DHDVSWVFNRAGLPVEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWLKGET-- 124
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ + P+ + +VA++EP VL ++ C G++C +G++++ +++GIYP E
Sbjct: 125 --VPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLIGDGFDGYVQQSQLFGIYPNEKV 182
Query: 194 K 194
+
Sbjct: 183 E 183
>gi|300025010|ref|YP_003757621.1| hypothetical protein Hden_3509 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526831|gb|ADJ25300.1| protein of unknown function DUF1058 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 185
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
P+PRFV++K+ R N R GPG Y Y GLP+E+V+E+E+WR++RD +G GW
Sbjct: 40 SGLPVPRFVSLKSDRVNLRNGPGTDYPTGWVYRRAGLPLEIVQEFESWRKVRDSEGATGW 99
Query: 110 INKSLLSGKRSAIVSPWNRKTNN-PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ +S LSG+R+A+V PW RK + P + ++ +S IV VE GV+ +R C G WC
Sbjct: 100 VLQSFLSGRRTALVLPWERKASTKPPLVPIHASDSERSHIVVNVEAGVIADLRTCDGRWC 159
Query: 169 FGYNLDTEGWIKKQKIWGIYPGEVFK 194
G+I+++K+WG Y GE K
Sbjct: 160 RVTVDAYTGYIEQKKLWGAYEGETIK 185
>gi|85714163|ref|ZP_01045152.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
gi|85699289|gb|EAQ37157.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
Length = 176
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 25 SLIFTLAIYFYLAP--ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S++F+ A+ + A P+PR+V++K+ N R GP V Y
Sbjct: 9 SMVFSAAMLSAIGIETTAAAKDSALSTSGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYT 68
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ + + LY +
Sbjct: 69 KAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKIKGD----FAVLYDRA 124
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
D+Q + A+++ GV+ ++ C+ WC +GWI+++++WG+Y E
Sbjct: 125 DVQGNVAARLQAGVVTQVKHCAAGWCHVAGDGFDGWIEQRRLWGVYADEKI 175
>gi|254476612|ref|ZP_05089998.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
gi|214030855|gb|EEB71690.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
Length = 178
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPRFV++KA+ N R GP + + + + +G+P+E+ EY +WR++RD
Sbjct: 36 EARGPVTNLPLPRFVSMKAAEGNVRRGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVRDR 95
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ +LLSG R+ +V + + +P++ + + A E GV+ + +C
Sbjct: 96 DGAGGWVHYALLSGARTVLV--------EEDMLTVRARPEVNAPVTAAFEMGVVARLGKC 147
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+WC GW K+K+WG+ P E+
Sbjct: 148 HLDWCSISAGGYRGWAPKEKLWGVAPDEL 176
>gi|75674235|ref|YP_316656.1| hypothetical protein Nwi_0036 [Nitrobacter winogradskyi Nb-255]
gi|74419105|gb|ABA03304.1| Protein of unknown function DUF1058 [Nitrobacter winogradskyi
Nb-255]
Length = 176
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 25 SLIFTLAIYFYLAP--ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S++F A +A P+PR+V++K+ N R GP V Y
Sbjct: 9 SMVFAAATLGAVAIETTADAKDSALSTSGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVYT 68
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ + P LY +
Sbjct: 69 KAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKAKDDFTP----LYDRA 124
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
D+Q + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 125 DVQGNVAARLQAGVVTQVKRCAAGWCHVTGDGFDGWIEQQRLWGVYADEKI 175
>gi|170749094|ref|YP_001755354.1| hypothetical protein Mrad2831_2687 [Methylobacterium radiotolerans
JCM 2831]
gi|170655616|gb|ACB24671.1| protein of unknown function DUF1058 [Methylobacterium radiotolerans
JCM 2831]
Length = 187
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ + L+ LA AP K PLPR+ ++K R N R GP +
Sbjct: 6 LSLAVAAVLVGGLATGARAAPPAGPEAGVGPVTKLPLPRYASLKTDRVNLREGPSKDHRT 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + GLPVE+V E+E WR+IRD +GT GW+ SLLSG+R+AIV+ K ++
Sbjct: 66 LWVFQRAGLPVEIVGEFETWRRIRDSEGTEGWVLHSLLSGRRTAIVNAGPDKGAEKAAVS 125
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-----YNLDTEGWIKKQKIWGIYPGEV 192
L K D + AK++ GV+ +++ C+G WC D +G+I++ ++WG+YP EV
Sbjct: 126 LRAKADDGADDEAKLQTGVIGSVKSCTGTWCRMIVALPNKRDVDGYIRQNRLWGVYPNEV 185
Query: 193 FK 194
+
Sbjct: 186 VE 187
>gi|294676080|ref|YP_003576695.1| hypothetical protein RCAP_rcc00523 [Rhodobacter capsulatus SB 1003]
gi|294474900|gb|ADE84288.1| protein of unknown function DUF1058 [Rhodobacter capsulatus SB
1003]
Length = 206
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+A LA+ + + PLPR+V++K S N+R GP + + + + G+P+ V E+
Sbjct: 55 AVAQALAVQNGRGPVTNLPLPRYVSLKGSEGNARRGPSLSHRIDWVFTHPGMPLRVTAEF 114
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+WR++ D DG GW++ +LLSG R+ IV L+ + D +S +VA E
Sbjct: 115 GHWRRVEDRDGAGGWVHYALLSGVRTVIV--------EDDMTELHARADAKSAVVALAEM 166
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
G + + C+ +WC + +GW+ K IWG+ E+
Sbjct: 167 GAVAQLENCTPDWCEISAEEADGWVPKTAIWGVDADEI 204
>gi|83954721|ref|ZP_00963432.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
gi|83841005|gb|EAP80176.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
Length = 168
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 18 MPKILQNSLIFTLA-IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M +L++ L+ TLA ++ P+ A E P+PRFV++KAS N R GP + +
Sbjct: 1 MKPMLRSVLLGTLAAVHLCTTPVFA--QEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHR 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + + LP+ + E+ +WR++ D DG GW++ SLLSG R+ +V +
Sbjct: 59 IDWVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTRTVLV--------EQDRL 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 111 QLLVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|115522273|ref|YP_779184.1| hypothetical protein RPE_0245 [Rhodopseudomonas palustris BisA53]
gi|115516220|gb|ABJ04204.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisA53]
Length = 175
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ +L+ + A P+PR+V++K+ N R GP V Y GL
Sbjct: 12 VVSLSWGLSVTASQAAKDSPATTSGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGL 71
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVE+ EYENWR++RD +G GW+ SLLSG+R+A+++ N+ P +Y + + S
Sbjct: 72 PVEITAEYENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKNKDDLAP----VYDEANPAS 127
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ AK++ GV+ I+ C+ WC EGWI+++++WG+Y E +
Sbjct: 128 SVAAKLQVGVVAQIKRCASGWCRVLGNGFEGWIQQERLWGVYADEKVE 175
>gi|254437485|ref|ZP_05050979.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252931|gb|EDY77245.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 186
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
SL ++A Y + PI A+ ++ P+PR+V++KA+ AN R GP + + + + +
Sbjct: 25 SLAHSVAAYEAVVPITAVQSDRGPVTNLPMPRYVSLKANEANVRRGPSLSHRIDWVFQRR 84
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+ VV E+ +WR++ D +G GW++ SLLSG R+ I+ + + L +PD
Sbjct: 85 DMPLRVVGEFGHWRRVVDREGMGGWVHYSLLSGNRTVII--------DRDLLVLRGQPDA 136
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ VA +E GV+ + EC +WC GW K ++G+ E+
Sbjct: 137 DATEVAMLELGVIADLGECHIDWCRLRADGHRGWALKAAMFGVGADEL 184
>gi|83943719|ref|ZP_00956177.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
gi|83845399|gb|EAP83278.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
Length = 168
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 18 MPKILQNSLIFTLA-IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M +L++ L+ LA ++ P+ A E P+PRFV++KAS N R GP + +
Sbjct: 1 MKPMLRSVLLGALAAVHLCTTPVFA--QEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHR 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + + LP+ + E+ +WR++ D DG GW++ SLLSG R+ +V +
Sbjct: 59 IDWVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTRTVLV--------EQDRL 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 111 QLLVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|154254073|ref|YP_001414897.1| hypothetical protein Plav_3642 [Parvibaculum lavamentivorans DS-1]
gi|154158023|gb|ABS65240.1| protein of unknown function DUF1058 [Parvibaculum lavamentivorans
DS-1]
Length = 199
Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 2 FTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK 61
+L +L + + Q S A P++ P+PR+V++K
Sbjct: 16 LAAGGALLVALGC---LTGMAQASDRIATAALEEREPLV---RTPGTATGLPVPRYVSLK 69
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ RAN R GPG + + Y G+P+EV+ E NWR+IRD +G GWI ++L+G+RSA
Sbjct: 70 SGRANVRRGPGTDFPIDWVYRKSGMPLEVIAESNNWRRIRDHEGDGGWIWHTMLAGERSA 129
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
IV + + + + LYK+PD QS ++A E G++ + C+G WC EGW+ +
Sbjct: 130 IV---DAQAADGGPVALYKEPDRQSAVMAYAERGLVARVTSCTGNWCHLEAGGAEGWVAQ 186
Query: 182 QKIWGIYPGEVFK 194
+WG+YPGE F+
Sbjct: 187 SALWGVYPGERFE 199
>gi|90421877|ref|YP_530247.1| hypothetical protein RPC_0353 [Rhodopseudomonas palustris BisB18]
gi|90103891|gb|ABD85928.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB18]
Length = 175
Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A P+PR+V++K+ N R GP V Y GLPVE+ EYENWR++
Sbjct: 26 AAKDGPISASGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRV 85
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD +G GW+ SLLSG+R+A+V+ ++ P LY + S + A+++ GVL +
Sbjct: 86 RDSEGAEGWVYHSLLSGRRTAVVTMKSKDELAP----LYDSASVTSPVAARLQAGVLTQV 141
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ C+ WC +GWI+++++WG+Y E
Sbjct: 142 KRCAQGWCRVIGNGFDGWIQQERLWGVYADEKVD 175
>gi|126737359|ref|ZP_01753094.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
gi|126721944|gb|EBA18647.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
Length = 174
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 23 QNSLIFTLAIYFYLAPILALS-HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + + +LAI+ A + ++ PLPR+V++KAS N R GP + + + +
Sbjct: 10 RIAAVLSLAIFVVAPISEAWAKGKRGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWVF 69
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+G+P+E+ EY +WR++RD DG GW++ +LLSG R+ ++ + ++
Sbjct: 70 KRRGMPLEITAEYGHWRRVRDQDGAGGWVHYALLSGVRTVLI--------QEDMLTVHAH 121
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
P+ Q+ I A E GV+ + EC+ WC GW K K+WG+ P EV
Sbjct: 122 PNPQAPITAAFEYGVVARLGECAEAWCEITAGGYSGWAPKSKLWGVAPEEV 172
>gi|222086965|ref|YP_002545499.1| hypothetical protein Arad_3671 [Agrobacterium radiobacter K84]
gi|221724413|gb|ACM27569.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 184
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+L LA P+ A + K P+PR+V++KA +A R+GP +Y
Sbjct: 11 FCLMLGFLTSAALATPMPAQPVAATAWNKGRETGLPIPRYVSLKAHKARMRVGPSTIYAT 70
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
Y+ GLP+E++ EY WRQ+RD GT GW++ +LLSG+R+A+V+PW +
Sbjct: 71 KWIYMKPGLPLEIIDEYGRWRQVRDDTGTTGWMHGALLSGQRTAVVAPWLKTN-----AM 125
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT--EGWIKKQKIWGIYPGEVFK 194
L P+ + ++A+++P VLL++ C+G WC + G+I++ +WG YPGE+F+
Sbjct: 126 LRGGPEKTANLIAELQPRVLLSLHSCTGAWCNVSVREHSARGYIRQDLLWGAYPGEMFQ 184
>gi|259416866|ref|ZP_05740786.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
gi|259348305|gb|EEW60082.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
Length = 201
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPRFV++KA+ N R GP + + + + +G+P+EV EY +WR+++D DG
Sbjct: 62 GPVTNLPLPRFVSMKAAEGNVRRGPSLNHRIDWVFKRRGMPLEVTAEYGHWRRVQDRDGQ 121
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R+ ++ + + +P + +VA E GV+ + C
Sbjct: 122 GGWVHYALLSGIRTVLI--------EEDMLQVRARPQEGAPVVAAFELGVVAQLGACDPS 173
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEV 192
WC GW +K+ +WG+ E+
Sbjct: 174 WCEVTAGGHTGWTRKENLWGVDADEL 199
>gi|260429234|ref|ZP_05783211.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
gi|260419857|gb|EEX13110.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
Length = 166
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E+ P+PRFV++KA N R GP + + + Y +G+P+EV EY +WR++
Sbjct: 21 SATEERGAVTNLPIPRFVSLKAGETNVRRGPSLTHRIDWVYKRRGMPLEVTAEYGHWRRV 80
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW++ SL+SG R+ +V + L+ +P + AK+ GV+ +
Sbjct: 81 RDVDGAGGWVHYSLISGVRTVLV--------EDDMLELHSRPGDNMPVEAKLAVGVIAKL 132
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+C+ +WC EGW K +WG+ E
Sbjct: 133 GDCTVDWCEISAGGYEGWAHKAALWGVDAEET 164
>gi|163849872|ref|YP_001637915.1| hypothetical protein Mext_0422 [Methylobacterium extorquens PA1]
gi|218528503|ref|YP_002419319.1| hypothetical protein Mchl_0455 [Methylobacterium chloromethanicum
CM4]
gi|163661477|gb|ABY28844.1| protein of unknown function DUF1058 [Methylobacterium extorquens
PA1]
gi|218520806|gb|ACK81391.1| protein of unknown function DUF1058 [Methylobacterium
chloromethanicum CM4]
Length = 197
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGC 160
Query: 164 SGEWCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|240137097|ref|YP_002961566.1| hypothetical protein MexAM1_META1p0337 [Methylobacterium extorquens
AM1]
gi|240007063|gb|ACS38289.1| conserved hypothetical protein precursor [Methylobacterium
extorquens AM1]
Length = 189
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 33 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 92
Query: 106 TIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C
Sbjct: 93 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGC 152
Query: 164 SGEWCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 153 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 189
>gi|254450049|ref|ZP_05063486.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
gi|198264455|gb|EDY88725.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
Length = 181
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ + + L ++A + PI ++ ++ P+PR+V++KA+ AN R GP + + +
Sbjct: 13 IALAMSSPLAQSVAAQETVVPITSVQSDRGPVTNLPMPRYVSLKANEANVRRGPSLSHRI 72
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +P+ VV EY +WR++ D +G GW++ SLLSG R+ I+ + +
Sbjct: 73 DWVFQRRDMPLRVVGEYGHWRRVVDREGMGGWVHYSLLSGNRTVII--------DRDLLV 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L ++ S VA +E GV+ + EC +WC GW K ++G+ E+
Sbjct: 125 LRRQAIAASTEVAILELGVIADLGECQIDWCRLRADGYRGWAPKADLFGVGADEL 179
>gi|254511634|ref|ZP_05123701.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
gi|221535345|gb|EEE38333.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
Length = 163
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 26 LIFTLAIYFY-LAPILALSHE-KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
++ ++++ L + A + E + PLPR+V++KA+ N R GP + + + +
Sbjct: 1 MVAAISVFLLALGTVTASAQEKRGPVTNLPLPRYVSMKAAEGNVRRGPSLTHRIDWVFKR 60
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G+P+++ EY NWR+++D DG GW++ +LLSG R+ ++ + +Y PD
Sbjct: 61 RGMPLQITAEYGNWRKVQDRDGAGGWVHYALLSGVRTVLI--------EAELLPVYALPD 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + A E GV+ + ECS +WC GW K +WG+ E+
Sbjct: 113 PNTQVNAHFETGVVARLEECSPDWCRISAGGYRGWTLKTNLWGVDSSEI 161
>gi|126725836|ref|ZP_01741678.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
gi|126705040|gb|EBA04131.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
Length = 167
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S++F I + +A + + PLPRFV++KAS N R GP + + + + +
Sbjct: 6 SVLFLALILAATSSGIADENPRGSVTNLPLPRFVSLKASEGNVRRGPSLAHKIDWVFKHR 65
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+++V EY NWR+I+D DG GW++ SLLSG R I+ N LY D
Sbjct: 66 NMPLQIVGEYGNWRRIKDRDGAGGWMHYSLLSGSRMVII--------NGDRTPLYILADE 117
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+S A+ E G L + +CS WCF + +GWI K +WG+ E+
Sbjct: 118 KSKKSAEAEDGALAKLEDCSLHWCFVRADNAKGWIPKSALWGVDEDEI 165
>gi|119384675|ref|YP_915731.1| hypothetical protein Pden_1942 [Paracoccus denitrificans PD1222]
gi|119374442|gb|ABL70035.1| protein of unknown function DUF1058 [Paracoccus denitrificans
PD1222]
Length = 200
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPR+V++K N+R GP + + + + G+P+ VV E+ +WR++ D
Sbjct: 58 PNRGSVTNLPLPRYVSLKGGEGNARRGPSLSHRIDWVFRHAGMPLRVVAEFGHWRRVEDQ 117
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ SLLSG R+AIV+ ++L +P+ ++ +VA+ E G ++ + EC
Sbjct: 118 DGAGGWVHYSLLSGVRTAIVT--------KDMLDLLARPEPRASVVARAEAGAIVRLHEC 169
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+WC +GW+ K IWG+ P E+
Sbjct: 170 IVDWCRVSGGGEKGWVPKTTIWGVDPDEI 198
>gi|254559109|ref|YP_003066204.1| hypothetical protein METDI0492 [Methylobacterium extorquens DM4]
gi|254266387|emb|CAX22151.1| conserved hypothetical protein precursor [Methylobacterium
extorquens DM4]
Length = 197
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+A+V P R + + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSGEQARLQPGVIGSVKGC 160
Query: 164 SGEWCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|254295396|ref|YP_003061419.1| hypothetical protein Hbal_3054 [Hirschia baltica ATCC 49814]
gi|254043927|gb|ACT60722.1| protein of unknown function DUF1058 [Hirschia baltica ATCC 49814]
Length = 197
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEI--FEKKPLPRFVTIKASRA 65
+L ++ + +P Q+ A L P + E+ I F P+PR+ ++K +
Sbjct: 24 LLSAMGMSAMVPAFAQSDFTIEPA---SLTPYVNPQQERRISKFSSMPVPRYASLKYNEV 80
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+GPG+ Y + Y GLPV VVKE +NWR+IRD G W+++ +L +R+ I S
Sbjct: 81 NGRLGPGLEYPIKWQYQRSGLPVLVVKESKNWRKIRDPQGDEVWVHQRMLGARRTGITS- 139
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +Y+KPD++++ +A+VE GV+ I EC G+WC GW + IW
Sbjct: 140 --------TNVIMYQKPDLETLPIAEVEMGVVADIAECEGDWCRVDIDGRNGWAYRNSIW 191
Query: 186 GIYP 189
G+
Sbjct: 192 GVDD 195
>gi|296446203|ref|ZP_06888150.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
gi|296256240|gb|EFH03320.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
Length = 180
Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ LPRFV++K+ R N GP + + Y GLPVE+ E+E WR+IRD
Sbjct: 36 QQQIGPVSGLALPRFVSLKSDRVNLHEGPSKEHPTLWVYERAGLPVEITAEFETWRKIRD 95
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+GT GW+ SLLSG+R+A+V+PW ++ +S +A++ PGV+ +R
Sbjct: 96 SEGTEGWVLHSLLSGRRTALVAPWKKEPA-------LAYARDRSTPLARLSPGVVANLRL 148
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C G WC +G++ ++ +WG+YPGE
Sbjct: 149 CDGSWCRVSGDGFDGYVHQENLWGVYPGEKID 180
>gi|209966396|ref|YP_002299311.1| hypothetical protein RC1_3134 [Rhodospirillum centenum SW]
gi|209959862|gb|ACJ00499.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 189
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 8/145 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
P+PRF T+++ N R GPG+ Y V ++ G+PVE+ E++ WR+IRD++GT GW
Sbjct: 52 SGLPIPRFATLRSDEVNLRTGPGVRYPVDWVFVRAGMPVEITAEFDTWRRIRDWEGTQGW 111
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+++S+L G+RS +V+ R L ++P S VA+ EPGV+ + C G+WC
Sbjct: 112 VHRSMLVGRRSFVVTGDIR--------TLRQEPGGSSPAVAQAEPGVMGRLNYCKGDWCR 163
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVFK 194
EGW+++ + WG+YP E K
Sbjct: 164 VEAQGIEGWLRRGEFWGVYPDEEVK 188
>gi|254463970|ref|ZP_05077381.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
gi|206684878|gb|EDZ45360.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
Length = 165
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPR+V++KA+ N R GP + + + + +G+P+E+ EY +WR+++D
Sbjct: 23 ESRGPVTNLPLPRYVSMKAATGNVRRGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVQDR 82
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ +LLSG R+ +V + ++ +PD ++ + A E GV+ + EC
Sbjct: 83 DGAGGWVHYALLSGVRTVLV--------EEDMLTVHARPDTRAPVTAAFELGVVARLGEC 134
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
EWC GW K+K+WG+ P E+
Sbjct: 135 ETEWCEISAGGYSGWAPKKKLWGVAPDEL 163
>gi|89053405|ref|YP_508856.1| hypothetical protein Jann_0914 [Jannaschia sp. CCS1]
gi|88862954|gb|ABD53831.1| protein of unknown function DUF1058 [Jannaschia sp. CCS1]
Length = 190
Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P P+PR+VT++A+ N+R GP + + + + +P+ VV E+ +W
Sbjct: 42 PADHAEARTGPVTGFPIPRYVTMRATEGNARRGPSRSHRIDWVFTRRHMPMMVVAEHGHW 101
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R++ D DG GW++ SLLSG RSAIV + L+ +PD S I A E GV
Sbjct: 102 RRVVDRDGAGGWMHYSLLSGNRSAIV--------ETDMLPLHARPDAASNIRAHAEMGVT 153
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ EC WC GW+ +WG+ P EVF
Sbjct: 154 GHLDECIPGWCRLEVGGFAGWVDASALWGVDPDEVFD 190
>gi|188579760|ref|YP_001923205.1| hypothetical protein Mpop_0492 [Methylobacterium populi BJ001]
gi|179343258|gb|ACB78670.1| protein of unknown function DUF1058 [Methylobacterium populi BJ001]
Length = 197
Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+A+V P R + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADAAKATVPLNARADEQSGEQARLQPGVIGSVKSC 160
Query: 164 SGEWCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGTWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|148284831|ref|YP_001248921.1| hypothetical protein OTBS_1538 [Orientia tsutsugamushi str.
Boryong]
gi|146740270|emb|CAM80628.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 165
Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ S I++ I F + + ++ + +PRF++ K + N R GP I Y +
Sbjct: 2 MMKTSRIYSFIITFIIMVTVFINAALSDNKNTKIPRFISTKTNEINMRTGPNIKYPIKWI 61
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ K P+E+V +++ W +RD G GWI+ S+LS KR+ +++ + NLYK
Sbjct: 62 FTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVINSNKIQ-------NLYK 114
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ +S I+A +EP V +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 115 SSNYESRIIAYLEPKVRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|310814772|ref|YP_003962736.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
gi|308753507|gb|ADO41436.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
Length = 234
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V+++++ N R GP V + GLPV++ EYE+WR+I D DG
Sbjct: 95 GASTNLPVPRYVSLRSNEVNVRRGPASSQRVDWVFHRAGLPVQITGEYEHWRRIIDRDGE 154
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R+ IV + + +P+ + ++A+ E GV+ + EC +
Sbjct: 155 GGWVHYALLSGNRTVIV--------QAELLPVLAQPEANAPVIAQFENGVIADLDECRPD 206
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEV 192
WC GW+ K +WG+ P E+
Sbjct: 207 WCRIGAGGYRGWVMKSALWGVDPTEI 232
>gi|260575389|ref|ZP_05843388.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
gi|259022309|gb|EEW25606.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
Length = 195
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 31 AIYFYLAPILALSH---EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
A + P++A + PLPR+VT+K N+R GPG+ + + + G+P
Sbjct: 37 AAETAMVPVVATPQHDPNRGSVTNLPLPRYVTLKNGEGNARRGPGLTHRIDWVFTRVGMP 96
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + EYE+WR++ D +G GW++ SLLSG RS +V+ ++ P
Sbjct: 97 LRITAEYEHWRRVEDAEGAGGWVHYSLLSGVRSVLVA--------QDMAGIHAWPAPDGE 148
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++A+ E GV+ + EC +WC +GW+ K +WG+ PGEV +
Sbjct: 149 VIAQAELGVIAKLLECLPDWCRIAVDGEKGWVPKAALWGVDPGEVIE 195
>gi|148251694|ref|YP_001236279.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
gi|146403867|gb|ABQ32373.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
Length = 137
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G+ GW+ S
Sbjct: 1 MPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGSEGWVYHS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG+R+A+V+ N+ +Y P + A+++ GV+ +++CS WC
Sbjct: 61 LLSGRRTAVVTMKNKDD----LAAVYDSPSASGAVTARLQVGVIAQVKKCSNGWCRVLGN 116
Query: 174 DTEGWIKKQKIWGIYPGEVF 193
+GWI++Q++WG+Y E
Sbjct: 117 GFDGWIEQQRLWGVYADEQV 136
>gi|254487979|ref|ZP_05101184.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
gi|214044848|gb|EEB85486.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
Length = 168
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + +L+ L I + E PLPRFV++KA+ N R GP + + +
Sbjct: 1 MTSKFRFALLGAL-IAILPMGGAGNATEVGQVTNLPLPRFVSMKAAEGNVRRGPSLTHRI 59
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +P+++ E+ +WR++ D DG GW++ SLLSG R+ ++ ++
Sbjct: 60 DWVFKHRDMPLQITAEHGHWRRVEDRDGMGGWVHYSLLSGTRTVLI--------EQDHLR 111
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD + + A+ E G + + C EWCF +GW K ++WG+ E+
Sbjct: 112 LLVRPDPNAPVAAEFELGAIARLGACDLEWCFLRADGYKGWAPKARLWGVGAAEL 166
>gi|157826400|ref|YP_001495464.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
gi|157801704|gb|ABV78427.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
Length = 159
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ I F L I+ + +K P+PRFV+IK++ N+R GP + ++ KG PV
Sbjct: 1 MIKILFALIAIILSTTINADNKKLPIPRFVSIKSNEVNARSGPTTKAAIEWVFVKKGEPV 60
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K +I+S +
Sbjct: 61 EIIAEYEQWRQVRDIHGESGWIHSSILSGRRSVIIIADQE-------IELLKHANIESRV 113
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 114 IAKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVYDD 155
>gi|221638733|ref|YP_002524995.1| hypothetical protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
gi|221159514|gb|ACM00494.1| Hypothetical Protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
Length = 191
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 52 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 111
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R+A+V +L++ P S + + GV++ + EC +
Sbjct: 112 GGWVHYALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 163
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 164 WCRVSADGNRGWVIKTALWGVDPDEILQ 191
>gi|163796742|ref|ZP_02190700.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
gi|159177996|gb|EDP62543.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
Length = 165
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A++ P+PR+VT++A N R GPG+ Y + Y LPVEV+ E++ WR+I
Sbjct: 19 AIAATVGTETGLPIPRYVTLRAKEVNVRAGPGVRYPIEWVYQRPNLPVEVIAEFDTWRKI 78
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DGT GW+++ +LSG+R+ +V R L + P+ + VA++E GV+ +
Sbjct: 79 RDPDGTEGWVHQQMLSGRRAVLVIGAERL--------LRRTPEPNAPTVARLEIGVIGWL 130
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C +WC +GWI + IWG+ E K
Sbjct: 131 DGCRQDWCEVDVAGMDGWIPRSHIWGVRADEALK 164
>gi|77462863|ref|YP_352367.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332557754|ref|ZP_08412076.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
gi|77387281|gb|ABA78466.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332275466|gb|EGJ20781.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
Length = 191
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 52 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 111
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R+A+V +L++ P S + + GV++ + EC +
Sbjct: 112 GGWVHYALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 163
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 164 WCRVSADGNRGWVIKTALWGVDPDEILQ 191
>gi|84686302|ref|ZP_01014197.1| hypothetical protein 1099457000256_RB2654_08862 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665829|gb|EAQ12304.1| hypothetical protein RB2654_08862 [Rhodobacterales bacterium
HTCC2654]
Length = 169
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ + ++ A + E+ P+PRFV++K S AN R GP + + + + +G+
Sbjct: 10 FMAVVLGLIVSGAEARAAERGSVTNMPIPRFVSLKVSEANVRRGPSLTHKIDWVFTRRGM 69
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P+EV E+ +WR+++D DG GW++ SL+SG R+AIV + + +
Sbjct: 70 PLEVTGEFGHWRRVQDRDGVGGWVHYSLISGARTAIV--------DRDLAPVLVRAAADG 121
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ A++E GV++ + +C WC GW+++ +WG+ PGEV +
Sbjct: 122 QVKARLEAGVIVNMDKCGPVWCRVKVGGYRGWMERSALWGLKPGEVIE 169
>gi|163732362|ref|ZP_02139808.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
gi|161394660|gb|EDQ18983.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
Length = 132
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++KAS AN R GP + + + + + +P+ +V E+ +WR++ D DG GWI+ S
Sbjct: 1 MPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG R+ IV +N++ +P+ S + A +E GV+ + +C +WC +
Sbjct: 61 LLSGVRTVIV---------EETLNIHSRPNTDSPVNAMLEAGVIARLGKCEPDWCQVRSG 111
Query: 174 DTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P EV
Sbjct: 112 GFRGWTPKTLLWGVLPDEV 130
>gi|126461755|ref|YP_001042869.1| hypothetical protein Rsph17029_0986 [Rhodobacter sphaeroides ATCC
17029]
gi|126103419|gb|ABN76097.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17029]
Length = 203
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 64 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 123
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R+A+V +L++ P S + + GV++ + EC +
Sbjct: 124 GGWVHYALLSGARTAMVV--------AEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 175
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 176 WCRVSADGNRGWVIKTALWGVDPDEILQ 203
>gi|222147834|ref|YP_002548791.1| hypothetical protein Avi_1100 [Agrobacterium vitis S4]
gi|221734822|gb|ACM35785.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 239
Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ A + + + PLPRF ++KA R R GP Y V Y +GLPVE++
Sbjct: 76 LAPGTAAAMPMLRQTGRVTGYPLPRFASLKADRVRMRAGPSTDYPVRFIYEARGLPVEII 135
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+EY+NWRQ+RD DGT GW++ +LSG R+ +V+PW + + + L +P + I A+
Sbjct: 136 EEYDNWRQVRDSDGTSGWMSAVMLSGARTGLVAPW--RGSKGDLVMLRTRPLATAAITAQ 193
Query: 152 VEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKIWGIYPGEVF 193
++P V L I C G WC G++++ +WG+YPGE
Sbjct: 194 LQPRVRLKIGGCDGHWCSVSVERGGPSGFVRQGLVWGVYPGETI 237
>gi|220920423|ref|YP_002495724.1| hypothetical protein Mnod_0379 [Methylobacterium nodulans ORS 2060]
gi|219945029|gb|ACL55421.1| protein of unknown function DUF1058 [Methylobacterium nodulans ORS
2060]
Length = 187
Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V++K R N R GP + + + GLPVE+V E+E WR+IRD +GT
Sbjct: 37 GPVSGLPMPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVSEFETWRRIRDSEGT 96
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+ SLLSG+R+A+V + + LY +P+ + +VA+++ GV+ +I+ CSG
Sbjct: 97 EGWVLHSLLSGRRTAVVLAQG---DKAAPVPLYAEPEGRGGVVAQLQAGVIGSIKSCSGT 153
Query: 167 WCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
WC D +G++++ ++WG+YP E +
Sbjct: 154 WCRLIVALPQKRGDVDGYLRQDRLWGVYPNEKVE 187
>gi|84499903|ref|ZP_00998169.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
gi|84391837|gb|EAQ04105.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
Length = 173
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E PLPR+V++KAS+ N R GP + + + ++ + +P+++ E+ +WR++ D
Sbjct: 30 TQETGPVTHLPLPRYVSMKASKGNVRRGPSVTHRIDWVFMRRNMPLQITAEHGHWRRVVD 89
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+G GWI+ SLLSG R+ ++ ++++ +P+ +S + A++E GV+ + +
Sbjct: 90 QEGAGGWIHHSLLSGVRTVLI--------QKDMLDIHLRPNRKSPVAAQLELGVVARLDQ 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
C+ +WC +GW K +WG+ E+
Sbjct: 142 CTPDWCRLSVAGYKGWAPKSALWGVEAAEL 171
>gi|189183587|ref|YP_001937372.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
gi|189180358|dbj|BAG40138.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
Length = 165
Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ S I++ I + + ++ + +PRFV+ K + N R GP I Y +
Sbjct: 2 MMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKWI 61
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ K P+E+V +++ W +RD G GWI+ S+LS KR+ +++ + NLYK
Sbjct: 62 FTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVINSNKIQ-------NLYK 114
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ +S I+A +EP + +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 115 SSNYESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|91204831|ref|YP_537186.1| hypothetical protein RBE_0016 [Rickettsia bellii RML369-C]
gi|91068375|gb|ABE04097.1| unknown [Rickettsia bellii RML369-C]
Length = 159
Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ I F L I+ + +K P+PRFV+IK++ N+R GP + ++ KG PV
Sbjct: 1 MIKILFALIAIILSTTINADNKKLPIPRFVSIKSNEVNARSGPTTKAAIEWVFVKKGEPV 60
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K +I+S +
Sbjct: 61 EIIAEYEQWRQVRDIHGESGWIHSSVLSGRRSVIIIADQE-------IELLKYANIESRV 113
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 114 IAKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVYDD 155
>gi|254472303|ref|ZP_05085703.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
gi|211958586|gb|EEA93786.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
Length = 182
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 39 ILALSHEKEI-FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
I A + P+PRFV++K+ R N R GP + + T++ LPVEVV+EY++W
Sbjct: 27 ITAQAQSAGSGVSGLPVPRFVSLKSDRVNVRNGPSRKHDIGWTFVRSRLPVEVVQEYDDW 86
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R+IRD++G GW+ K+LL+G RSA+V+PW N L K+P IVA +EP VL
Sbjct: 87 RRIRDWEGKEGWVFKTLLTGYRSALVTPWL--VNTVETTPLRKRPGPNEEIVAFLEPLVL 144
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ EC+ +C + EGW+ + +++G+Y E
Sbjct: 145 AGVVECTDGYCRISGKEFEGWVDQSRLFGVYKNETI 180
>gi|89069642|ref|ZP_01156981.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
gi|89044840|gb|EAR50940.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
Length = 163
Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E PLPR+V++K S N R GP + + + + +P+ V EY +WR++ D
Sbjct: 21 QEVGAVTNLPLPRYVSLKTSEGNLRRGPSLSHRIDWVLTRRNMPLRVTAEYGHWRRVIDR 80
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ SLLSG R+ IV ++L +PD + VA+ E GV+ I EC
Sbjct: 81 DGVGGWVHYSLLSGVRTVIV--------EADELSLLGRPDAAAPEVARFERGVVARIDEC 132
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+WC GW K WG+ PGEV
Sbjct: 133 LPDWCRLSAGGYRGWAPKGAYWGVEPGEVLD 163
>gi|312114989|ref|YP_004012585.1| hypothetical protein Rvan_2262 [Rhodomicrobium vannielii ATCC
17100]
gi|311220118|gb|ADP71486.1| protein of unknown function DUF1058 [Rhodomicrobium vannielii ATCC
17100]
Length = 175
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEK-----EIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ + ++ + + F ++L+ E PLPRFV++KAS N+R+GPG Y
Sbjct: 1 MTKFRIVCGILVAFSFFSGVSLAQEAAQRNAGPVTGLPLPRFVSLKASEVNARVGPGGEY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + GLPVEV+ E+ENWRQ+RD +G GW+N +L S +R+A+V+PW +
Sbjct: 61 QIAWVFRRAGLPVEVIAEFENWRQVRDSEGGTGWVNAALTSARRTAVVAPWVKDRMLFRL 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+VA++EPG ++ I +C GE C Y +G++ ++ +WG+YPGE K
Sbjct: 121 TATRGG----GTLVAQIEPGAIVDIAQCDGEDCEVYASKQKGYLPQKSLWGVYPGEKVK 175
>gi|288957055|ref|YP_003447396.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
gi|288909363|dbj|BAI70852.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
Length = 163
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + P+PRFVT++ N R GP Y + + K +PVE+++E++ WR+IRD
Sbjct: 20 SKDPTHASGLPIPRFVTVRVGEVNLRSGPNGSYPIEWVFKRKDMPVEIIQEFDTWRRIRD 79
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++G GW+++S LSG+R ++ R +Y P S +VA+ EPGV+ ++++
Sbjct: 80 WEGAEGWVHQSALSGRRGVLIVGQTRA--------IYDAPRGDSAVVARAEPGVIGSLKK 131
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C +WC GW+K+ WG Y GE
Sbjct: 132 CRDDWCEVDVKGYRGWMKRADFWGTYAGEKID 163
>gi|170740471|ref|YP_001769126.1| hypothetical protein M446_2231 [Methylobacterium sp. 4-46]
gi|168194745|gb|ACA16692.1| protein of unknown function DUF1058 [Methylobacterium sp. 4-46]
Length = 194
Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V++K R N R GP + + + GLPVE+V E+ENWR+IRD +GT
Sbjct: 44 GSRSGLPVPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVAEFENWRRIRDSEGT 103
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+ SLLSG+R+A+V + + LY + + +VA+++ GV+ +++ C+G
Sbjct: 104 EGWVLHSLLSGRRTAVVLAPG---DKAAPVPLYAEREGGGGVVAQLQAGVIGSVKSCNGT 160
Query: 167 WCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
WC D +G++++ ++WG+YP E +
Sbjct: 161 WCRLIVALPQKRGDVDGYMRQDRLWGVYPNEKVE 194
>gi|239946793|ref|ZP_04698546.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921069|gb|EER21093.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 167
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G
Sbjct: 27 ADNKKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGE 86
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS I++ + I L K D +S ++AK+ P V +++C +
Sbjct: 87 GGWIHSSVLSGKRSVIITSDKK-------IELTKSADPKSRVIAKLMPKVRCGLKKCKEQ 139
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+C D GWI K+ IWG+Y
Sbjct: 140 FCQITCKDYTGWISKKVIWGVYDD 163
>gi|157964957|ref|YP_001499781.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
gi|157844733|gb|ABV85234.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
Length = 170
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 56/141 (39%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE++ EY+ WRQ+RD +G GW
Sbjct: 32 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEIIAEYKQWRQVRDINGEGGW 91
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 92 IHSSVLSGKRSVVIT-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEQFCQ 144
Query: 170 GYNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 145 ITCKDYTGWISKKVIWGVYDD 165
>gi|114571600|ref|YP_758280.1| hypothetical protein Mmar10_3061 [Maricaulis maris MCS10]
gi|114342062|gb|ABI67342.1| protein of unknown function DUF1058 [Maricaulis maris MCS10]
Length = 188
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHE-KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ + L + F + E + +PRFV++K AN R GP + +
Sbjct: 1 MRSLIALILCLTFAGSAFATQDSEHTATPSGQAVPRFVSLKVDVANGRSGPSSQHPIAWR 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
YL GLP+EV+ E +WR++RD +G + W+++S+LSG+RS L+
Sbjct: 61 YLRAGLPMEVIAETPDWRRVRDPEGEVTWMHRSILSGRRSVYTL---------EETTLHA 111
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ S I A E GV+L++ C WC GW++ +WG+YP E+
Sbjct: 112 RDSDSSPIEAVAEAGVILSLERCRTGWCRVEGQGFRGWVRPHTLWGVYPQEL 163
>gi|83595118|ref|YP_428870.1| hypothetical protein Rru_A3789 [Rhodospirillum rubrum ATCC 11170]
gi|83578032|gb|ABC24583.1| Protein of unknown function DUF1058 [Rhodospirillum rubrum ATCC
11170]
Length = 186
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEK---------EIFEKKPLPRFVTIKA 62
+ LRK + + LA+ P A + E PLPRF ++++
Sbjct: 1 MTLRKPFSLPALVATMVALALVVATPPTKAQVAPEADENAGSGGEAPSGLPLPRFASLRS 60
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
++ N R GPG Y VV T+ +G+P+E++ EY+NWR+IRD +G+ GW+++ +LSG+R+ +
Sbjct: 61 AQINMRSGPGTRYPVVWTFQKRGIPIEILAEYDNWRKIRDPEGSEGWVHRHMLSGERTFL 120
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
+ L P ++S +A++EPGV+ + C + +C GW+
Sbjct: 121 TIGGPQI--------LRSDPSVESRPLARLEPGVIGKLLTCPRATAYCRADVGGYLGWLA 172
Query: 181 KQKIWGIYPGEVFK 194
+ WG+Y E
Sbjct: 173 RDAFWGLYRDETLD 186
>gi|84515929|ref|ZP_01003290.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
gi|84510371|gb|EAQ06827.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
Length = 212
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ + LA +A + P+PRFV++ A+ AN R GP + +
Sbjct: 42 RWSRVMRMALCAMVLASAAAVAQEASDGPAIGPETNLPVPRFVSLNAAEANVRRGPSLSH 101
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + + +P+++V EY WR++ D DG GWI+ +LLSG R+ +V+
Sbjct: 102 RIDWVFKRRNMPLQLVAEYGQWRRVIDHDGQGGWIHYTLLSGARTVLVT--------ETP 153
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
L PD + A +E GV+ + +C +WC GW+ K IWG+
Sbjct: 154 TPLRTLPDPAAPENAILEQGVIGRLGQCEPDWCQLNAGGYRGWVPKSDIWGV 205
>gi|56551642|ref|YP_162481.1| hypothetical protein ZMO0746 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260752770|ref|YP_003225663.1| hypothetical protein Za10_0530 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543216|gb|AAV89370.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552133|gb|ACV75079.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 177
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
++ RK + Q + ++F ++P+ A LP + +I AS A R
Sbjct: 5 VFQSGKRKLFCAVAQFFIFCLCPVFFIMSPLSAAVIHTT------LPYWASISASEAFMR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GPG Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R+AI++
Sbjct: 59 SGPGANYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRRTAILNGVGI 118
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ NLY +P + ++ + E GV+ + +C WC G+I + +WG+
Sbjct: 119 Q-------NLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVD 171
Query: 189 PGEVFK 194
P E K
Sbjct: 172 PNEEIK 177
>gi|146278224|ref|YP_001168383.1| hypothetical protein Rsph17025_2188 [Rhodobacter sphaeroides ATCC
17025]
gi|145556465|gb|ABP71078.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 59 PVTSLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAG 118
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GW++ SLLSG RSA+V +L++ P S + V+ GV++ + C +W
Sbjct: 119 GWVHYSLLSGVRSAMVV--------AEMADLHEDPASGSTVTVHVQRGVVVRLLSCIRDW 170
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C GW+ K +WG+ P E+ +
Sbjct: 171 CRVSAEGNRGWVIKTALWGVDPAEILE 197
>gi|15604641|ref|NP_221159.1| hypothetical protein RP809 [Rickettsia prowazekii str. Madrid E]
gi|3861336|emb|CAA15235.1| unknown [Rickettsia prowazekii]
gi|292572460|gb|ADE30375.1| hypothetical protein rpr22_CDS790 [Rickettsia prowazekii Rp22]
Length = 167
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARRGPTTKSAVEWVFIKKGEPVEITAEYEQWRQVRDINGECGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LS KRS I++ + I L K D +S ++AK+ P V ++++C E+C
Sbjct: 90 IHSSVLSAKRSVIIA-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEEFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D +GWI K+ IWG+Y
Sbjct: 143 VTCKDYKGWISKKAIWGVY 161
>gi|296531931|ref|ZP_06894730.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
gi|296267741|gb|EFH13567.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
Length = 164
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PRFV++++ N RIGP + + TY + +PVE+++EY WR+IRD DGT
Sbjct: 23 GSVTGLPIPRFVSLRSDEVNLRIGPDTRFPIEWTYQRRDMPVEILREYNQWRRIRDIDGT 82
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+++S L+G+R+ +V R NL++ S +VA++ PGV+ IR C
Sbjct: 83 EGWVHQSTLAGRRTFLVRGQER--------NLHRSEGEGSAVVARLMPGVVGRIRRCQAA 134
Query: 167 --WCFGYNLDTEGWIKKQKIWGIYPGEVF 193
WC D G + + +IWG+ P E
Sbjct: 135 SRWCEVQVGDHRGHMLRSEIWGVGPDEEI 163
>gi|229587172|ref|YP_002845673.1| hypothetical protein RAF_ORF1141 [Rickettsia africae ESF-5]
gi|228022222|gb|ACP53930.1| Unknown [Rickettsia africae ESF-5]
Length = 167
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GW
Sbjct: 30 KKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGW 89
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 90 IHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQ 142
Query: 170 GYNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 143 ITCKDYTGWISKKVIWGVYDD 163
>gi|241761231|ref|ZP_04759319.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374138|gb|EER63635.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 177
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
++ RK + Q + ++F ++P+ A LP + +I AS A R
Sbjct: 5 VFQSGKRKLFCAVAQFFIFCLCPVFFIISPLSAAVIHTT------LPYWASISASEAFMR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GPG Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R+AI++
Sbjct: 59 SGPGANYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRRTAILNGVGI 118
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ NLY +P + ++ + E GV+ + +C WC G+I + +WG+
Sbjct: 119 Q-------NLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVD 171
Query: 189 PGEVFK 194
P E K
Sbjct: 172 PNEEIK 177
>gi|51473978|ref|YP_067735.1| hypothetical protein RT0797 [Rickettsia typhi str. Wilmington]
gi|51460290|gb|AAU04253.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 168
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+K P+PRFV+IK++ N R GP V ++ KG PVE+ EY WRQI D +G GW
Sbjct: 31 KKLPIPRFVSIKSNEVNVRRGPTTKSAVEWVFIKKGEPVEITAEYAQWRQICDINGECGW 90
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+ S+LS KRS I+ + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 91 IHSSVLSSKRSVIIV-------SDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEQFCQ 143
Query: 170 GYNLDTEGWIKKQKIWGIY 188
D +GWI K IWG+Y
Sbjct: 144 ITCKDYKGWISKNAIWGVY 162
>gi|34581157|ref|ZP_00142637.1| hypothetical protein [Rickettsia sibirica 246]
gi|157829085|ref|YP_001495327.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933809|ref|YP_001650598.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238650857|ref|YP_002916712.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
gi|28262542|gb|EAA26046.1| unknown [Rickettsia sibirica 246]
gi|157801566|gb|ABV76819.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908896|gb|ABY73192.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238624955|gb|ACR47661.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
Length = 159
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G
Sbjct: 19 ADNKKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGE 78
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C +
Sbjct: 79 GGWIHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQ 131
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+C D GWI K+ IWG+Y
Sbjct: 132 FCQITCKDYTGWISKKVIWGVYDD 155
>gi|159045511|ref|YP_001534305.1| hypothetical protein Dshi_2971 [Dinoroseobacter shibae DFL 12]
gi|157913271|gb|ABV94704.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 204
Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
PLPRFV++KA+ N R GP + + + + + +P+E+ EY +WR++R
Sbjct: 43 AEPRTGPVTNLPLPRFVSMKAAEGNVRRGPSLTHRIDWVFKHRNMPLEITGEYGHWRRVR 102
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D DG GW++ SLLSG R+ I+ + +P+ + + A+ E GV+ +
Sbjct: 103 DRDGAGGWMHYSLLSGARTVII--------EEDLAPVLSQPNEDAQVRARAELGVIARLE 154
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWGI 187
C WC T GW+++ ++WG+
Sbjct: 155 GCENAWCRVRVGRTRGWMQEAQLWGV 180
>gi|83944892|ref|ZP_00957258.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
gi|83851674|gb|EAP89529.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
Length = 196
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L + LAP A + + F P+PRFV++K + R GP + V Y
Sbjct: 1 MRKLFALILLLSGLLAPESASAQTCDTFSGLPVPRFVSLKFNETRGRAGPSFTHPVAWLY 60
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
KGLP+EVV E +WR++RD +G W+++ L+G+RS S R L +
Sbjct: 61 QRKGLPMEVVAETPDWRRVRDPEGEEVWMHRRTLTGRRSVWASEATR---------LLSR 111
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
PD + ++A VE G +L + C WC D GW + WG+YP E
Sbjct: 112 PDTDASLIADVEAGAVLWLERCRAGWCRLEADDRRGWARADAFWGVYPEET 162
>gi|15893174|ref|NP_360888.1| hypothetical protein RC1251 [Rickettsia conorii str. Malish 7]
gi|15620386|gb|AAL03789.1| unknown [Rickettsia conorii str. Malish 7]
Length = 167
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G
Sbjct: 27 ADNKKLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGE 86
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS +++ + I L K D +S ++AK+ P V ++++C +
Sbjct: 87 GGWIHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQ 139
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+C D GWI K+ IWG+Y
Sbjct: 140 FCQITCKDYTGWISKKVIWGVYDD 163
>gi|126734884|ref|ZP_01750630.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
gi|126715439|gb|EBA12304.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
Length = 176
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ L A PLPR+V+++AS AN R GP + +
Sbjct: 6 HWVRVCQIAIFAVVLGASSAYAQQGNAGPAIGPETNLPLPRYVSLRASEANVRRGPSLSH 65
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + + +P++V+ EY +WR++ D DG GW++ +LSG R+ ++ N
Sbjct: 66 RIDWVFQRQSMPLQVIAEYGHWRRVIDRDGQGGWVHYRMLSGARTVVIEEPNTV------ 119
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +P+ ++ A +E GV+ + +C+ EWC GW +K +WG+ E+
Sbjct: 120 --LRTRPEPGALENAVLETGVVARLGDCNPEWCRLTAGGYRGWARKAALWGVADAEI 174
>gi|67459674|ref|YP_247298.1| hypothetical protein RF_1282 [Rickettsia felis URRWXCal2]
gi|67005207|gb|AAY62133.1| unknown [Rickettsia felis URRWXCal2]
Length = 167
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G
Sbjct: 27 ADNKKLPIPRFVSIKSNEVNARSGPTTKSAVEWLFVKKGEPVEITAEYEQWRQVRDINGE 86
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS +++ + I L K D +S ++AK+ P V +++C +
Sbjct: 87 GGWIHSSVLSGKRSVVIT-------SDKEIELTKSADHKSRVIAKLMPKVRCGLKKCKEQ 139
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+C + GWI K+ IWG+Y
Sbjct: 140 FCQITCKNYTGWISKKVIWGVYDD 163
>gi|304392313|ref|ZP_07374254.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303295417|gb|EFL89776.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 190
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 17/187 (9%)
Query: 25 SLIFTLAIYFYLAPILALSH-------EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
++I LA+ P A S + PLPRFV++KA AN R+GPG Y++
Sbjct: 3 AIILGLALGHASDPANAASPVDREVSTKTGRETGLPLPRFVSLKARSANLRVGPGRKYSI 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI- 136
+ G+P+E+++E++ WR++RD DGT GW+ SLLS +R+A+V+PW R+ +
Sbjct: 63 SWRFQRSGVPLEIIQEFDRWRRVRDADGTTGWVLHSLLSSRRTAVVAPWERRRSIADLAK 122
Query: 137 ---------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ ++ S VA+++PG+ +T+REC WC W++++ +WG
Sbjct: 123 APVVKAAFFDAKREASSNSSTVARLQPGLQVTVRECEESWCRVKARTVSMWVRREMLWGT 182
Query: 188 YPGEVFK 194
Y EV +
Sbjct: 183 YKDEVIE 189
>gi|46201496|ref|ZP_00054934.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + A + PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E
Sbjct: 17 VSAVWAPTALAGEASGLPLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFE 76
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
WR+IRD+ GT GW+++S+LSG+R +V R L + +A+VEPG
Sbjct: 77 AWRKIRDWQGTEGWLHQSMLSGRRMMVVMGSQR--------TLRASDSDNADALAQVEPG 128
Query: 156 VLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL + +C + ++C +GW K+ +IWG+Y GE +
Sbjct: 129 VLGRLLQCPRNRDFCRVEINQIQGWFKRDEIWGVYKGEWIE 169
>gi|114328778|ref|YP_745935.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
gi|114316952|gb|ABI63012.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
Length = 281
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PRF ++A N R+GP Y + Y + LPVE+V+E++ WR ++D +G
Sbjct: 138 GSATGLPIPRFAALRADEVNMRVGPDTRYPIEWVYKRRELPVEIVREFQVWRLVQDQEGV 197
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG- 165
GW++++ L+G+R+ + + L ++ D +S VA ++PGV+ I+ C
Sbjct: 198 KGWVHQATLTGRRTFLTIGQ-------TPVTLRRRADEESSAVAILKPGVVGRIQNCEAK 250
Query: 166 -EWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
EWC G++++ +WG+ P EV
Sbjct: 251 SEWCQVQVKSYRGYLRRSTMWGLLPDEVV 279
>gi|157804187|ref|YP_001492736.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
gi|157785450|gb|ABV73951.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
Length = 159
Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats.
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K P+PRFV+IK++ N+R GP + ++ KG PVE++ EYE WRQ+RD +G
Sbjct: 19 ADNKKLPVPRFVSIKSNEVNARSGPTTKSAIEWVFIKKGEPVEIIAEYEQWRQVRDINGE 78
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS +V I L K + +S ++ K+ P V +++C +
Sbjct: 79 GGWIHSSVLSGKRSVVVIGDKE-------IELTKSVNPKSRVIVKLMPKVRCGLKKCKEQ 131
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+C D GWI K+ IWG+Y
Sbjct: 132 FCQITCKDYTGWISKKVIWGVYND 155
>gi|157826269|ref|YP_001493989.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
gi|157800227|gb|ABV75481.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
Length = 159
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+K +PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G
Sbjct: 19 ADNKKLSIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGE 78
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI+ S+LSGKRS I++ + I L K D +S ++AK+ P V +++C +
Sbjct: 79 GGWIHSSVLSGKRSVIIT-------SDKEIELTKSVDSKSRVIAKLMPKVRCGLKKCKEQ 131
Query: 167 WCFGYNLDTEGWIKKQKIWGIY 188
+C D GWI K+ IWG+Y
Sbjct: 132 FCQITCKDYTGWISKKAIWGVY 153
>gi|83309293|ref|YP_419557.1| hypothetical protein amb0194 [Magnetospirillum magneticum AMB-1]
gi|82944134|dbj|BAE48998.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 174
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E WR+IRD+
Sbjct: 31 SAGEASGLPLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFEAWRKIRDWQ 90
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
GT GW+++S+LSG+R +V R L + +A VEPGVL + +C
Sbjct: 91 GTEGWLHQSMLSGRRMMVVMGGQR--------TLRAGDSENADALALVEPGVLGRLLQCP 142
Query: 164 -SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++C +GW K+ +IWG+Y GE +
Sbjct: 143 RNRDFCRVEINQIQGWFKRDEIWGVYKGEWIE 174
>gi|114770151|ref|ZP_01447689.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
gi|114548988|gb|EAU51871.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
Length = 165
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 30 LAIYFYLAPILAL-SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+AI L+ + A+ ++E+ P+PRFV++K + R GP ++ + Y + P+
Sbjct: 8 IAITIVLSWVSAVKANERGPVTNLPIPRFVSMKVNEGFVRRGPSKLHRIDWVYKHRNTPL 67
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ EYE+WR+++D DG GW++ LLSG R+ + + +P+ Y+ D I
Sbjct: 68 MITGEYEHWRRVQDVDGQGGWMHFRLLSGTRTVV----FKSAKSPVKRRNYEGAD----I 119
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
V E GV+ + EC+ WC + +GW+ K IWG++ E+
Sbjct: 120 VFFAEKGVIGNLDECNLSWCKVFVNKKKGWVSKSHIWGVFENEL 163
>gi|144898306|emb|CAM75170.1| secreted protein containing DUF1058 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 166
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + A+ L L + E PLPRFV++K+ N R GPG+ Y + Y
Sbjct: 1 MVRVRVAGFAV-ALLLWGLVPAQAGET-SGLPLPRFVSLKSDEVNLRAGPGVRYPIDWIY 58
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L K LPVEVV E+E WR+IRD++G GW+++S+LSG+R +V L
Sbjct: 59 LRKDLPVEVVAEFEAWRKIRDWEGAEGWVHQSMLSGRRMMVVIGGQPHV-------LRAS 111
Query: 142 PDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ VA+V PG L + C + ++C T+GW+++ ++WG+Y GE +
Sbjct: 112 DADSADPVAQVAPGALGRVVNCPRNRDFCRVELNQTQGWLRRDQMWGVYKGEWLE 166
>gi|296114191|ref|ZP_06832846.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295979267|gb|EFG85990.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 356
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S +K PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR +
Sbjct: 166 MSPDKGSATGLPLPRFAAFRADEVNLRAGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVE 225
Query: 102 DFDGTIGWINKSLLSGKRSAI----------------------------------VSPWN 127
D DG GW++++ L G R+ + V+
Sbjct: 226 DADGQKGWVHQATLVGTRTFVIPGQPVQGDAQQAGQPSAKETDVIGRADSRIIGHVADAT 285
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIW 185
+ P + L K D S IVA ++PGV+ T+R+C WC GW+++Q +W
Sbjct: 286 QAAAVPGGVMLRGKADPASPIVAVLKPGVVGTLRQCPAGSGWCQVTVKQYSGWLERQSLW 345
Query: 186 GIYPGEVF 193
G+ P EV
Sbjct: 346 GLLPQEVI 353
>gi|241518642|ref|YP_002979270.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240863055|gb|ACS60719.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 184
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
KY+ I + +++ A + +K P+PRFV++K +RA RIGP Y
Sbjct: 9 KYLLSIAAIVSVHSVSNAAPSALASSTWMKKGRETGLPIPRFVSLKTTRARMRIGPAFEY 68
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V Y GLP+E+ +EY NWRQ+RD DG GW+++SLLS R+A++ PW ++T
Sbjct: 69 AVKWLYQAPGLPLEITEEYGNWRQVRDSDGVSGWMHRSLLSSNRTAVIGPWLKETTA--- 125
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKIWGIYPGEVF 193
L + S A++E V + I C+ WC G+++K +WG+YP EV
Sbjct: 126 --LRAQARQNSFAKAELESRVRVQILSCTLSWCNVALNKDHISGFVEKSALWGVYPQEVV 183
>gi|58040675|ref|YP_192639.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
gi|58003089|gb|AAW61983.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
Length = 311
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K PLPR+ ++A + R GPG Y + Y +GLPVE+ +E++ WR + D
Sbjct: 122 NTDKGSNTGLPLPRYAALRADKVYMRRGPGDRYPIDWVYHRRGLPVEIEREFDVWRLVED 181
Query: 103 FDGTIGWINKSLLSGKRSAI----------------------------------VSPWNR 128
DG GW++++ L G R+ + V+ +
Sbjct: 182 SDGQKGWVHQATLYGSRTFVIPGLPPEGVKAQNGEASAQEGDHIGKADARILARVATQDE 241
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWG 186
+ + L P+ S ++A ++ G + I+ C + +WC EGW+ ++ WG
Sbjct: 242 ARAHKNDVLLMSHPEEDSTVIAVLQQGTVGNIKLCPQNSQWCRVSVKGYEGWLPRRLFWG 301
Query: 187 IYPGEVFK 194
+ PGE +
Sbjct: 302 LLPGETIQ 309
>gi|258541712|ref|YP_003187145.1| hypothetical protein APA01_06150 [Acetobacter pasteurianus IFO
3283-01]
gi|256632790|dbj|BAH98765.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635847|dbj|BAI01816.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638902|dbj|BAI04864.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641956|dbj|BAI07911.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645011|dbj|BAI10959.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648066|dbj|BAI14007.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651119|dbj|BAI17053.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654110|dbj|BAI20037.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 338
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 38/186 (20%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K PLPR+ ++A N R GPG + ++ Y +G+PV + +E++ WR + D G
Sbjct: 150 KGTVTGLPLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPVRIEREFDVWRLVEDPTG 209
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPI------------------------------- 134
GW+ ++ L+G R +V + PI
Sbjct: 210 QKGWMQQATLAGGRDFLVPGEPPGDDAPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDA 269
Query: 135 -----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ L + +VA ++PG + +++EC+ WC GW+ ++ IWG+
Sbjct: 270 KSIAGAVMLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGV 329
Query: 188 YPGEVF 193
E
Sbjct: 330 DADEAV 335
>gi|330991432|ref|ZP_08315383.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
gi|329761451|gb|EGG77944.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
Length = 298
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ K PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR + D
Sbjct: 110 NTKGSVTGLPLPRFAAFRADEVNLRTGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVEDS 169
Query: 104 DGTIGWINKSLLSGKRSAI----------------------------------VSPWNRK 129
DG GW++++ L G R+ + V+
Sbjct: 170 DGQKGWVHQATLVGTRTFVIPGLPPQGDAQQADQPSAKETDVIGRADTRIVGHVADVAEA 229
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ L S VA + PGV+ TIR+C+ WC GW+++ +WG+
Sbjct: 230 AGVKGAVMLRADAATTSAPVAVLRPGVVGTIRQCAAGTPWCKVSVKQYSGWLERSAMWGL 289
Query: 188 YPGEVF 193
P EV
Sbjct: 290 LPQEVI 295
>gi|329115262|ref|ZP_08244017.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
gi|326695705|gb|EGE47391.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
Length = 383
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 38/186 (20%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K PLPR+ ++A N R GPG + ++ Y +G+P+ + +E++ WR + D G
Sbjct: 195 KGTVTGLPLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPMRIEREFDVWRLVEDPTG 254
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPI------------------------------- 134
GW+ ++ L+G R +V + PI
Sbjct: 255 QKGWMQQATLAGGRDFLVPGEPPGDDTPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDT 314
Query: 135 -----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ L + +VA ++PG + +++EC+ WC GW+ ++ IWG+
Sbjct: 315 KSIAGAVMLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGV 374
Query: 188 YPGEVF 193
E
Sbjct: 375 DADEAV 380
>gi|294085136|ref|YP_003551896.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664711|gb|ADE39812.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 154
Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
P+PRFVTIK +AN R GPG Y V+ Y GLPV V E+ WR++ D +GT GW
Sbjct: 18 SGHPIPRFVTIKFEKANLRAGPGSEYPVLWQYRRLGLPVLVDAEFGVWRKVVDHEGTSGW 77
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ SLL KR+A V+ I + + + ++ ++A E G LL + C +WC
Sbjct: 78 MRGSLLGLKRNAFVT--------KGVIKIRAQDNQEARVIAVAERGALLDLETCPKQWCR 129
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVF 193
+ D GW+ + IWGI GEV
Sbjct: 130 VAHGDITGWVPRHSIWGIMDGEVI 153
>gi|262277750|ref|ZP_06055543.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
gi|262224853|gb|EEY75312.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
Length = 152
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++K ++ N R+GP Y V Y K LPV ++ E+ NWR+I+D++ +GWI+ S LS
Sbjct: 24 SLKNNKVNVRLGPSKTYPVKFIYKNKYLPVLIIDEHYNWRKIKDYENDLGWIHISQLSRT 83
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
RS + + N+ ++ P I S AK+E +L I EC+ WC N GW
Sbjct: 84 RSTVTTKNNQV--------IFSSPTIFSKPKAKLEIYQVLIISECTKNWCKVKNSKINGW 135
Query: 179 IKKQKIWGIYPGEVFK 194
IKK +WGI E+ K
Sbjct: 136 IKKNHLWGIQKDEIIK 151
>gi|85708759|ref|ZP_01039825.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
gi|85690293|gb|EAQ30296.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
Length = 166
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+L F + L A+ + + + +P + T++ N R+GP Y + Y
Sbjct: 1 MTALRFFAVLGLCLVLASAIFTDALRAQNREVPYWATLRFDEVNMRVGPSQEYKIDWVYK 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KGLPV+VV+ E+WR ++D +GT GW+ S L+ K ++ L ++P
Sbjct: 61 RKGLPVKVVRVRESWRLVQDHEGTQGWVAASQLNPKLGVLIIGEG-------LTELREEP 113
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
S++ EPGV+ + EC +C GW+ ++WG+
Sbjct: 114 AANSVMRWLAEPGVVGELIECRDNFCEIDVDGRVGWVAMDRLWGV 158
>gi|304320326|ref|YP_003853969.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
gi|303299228|gb|ADM08827.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
Length = 179
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A A A + P+PRFV ++ R +R GP Y V + KGLP++V
Sbjct: 27 ASEAASASTPAFTTSTTSASGLPIPRFVGLRKDRVRARFGPSFDYPVSYEFSMKGLPLKV 86
Query: 91 VKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ E + WR++ D DG WI++S+LS A+V L P +
Sbjct: 87 IGEDRDNIWRRVEDRDGQRMWIHRSMLSANSHAVV--------QAPEAILRTGPGATNAA 138
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
A++ GV L + C WC + + GW+ +WG
Sbjct: 139 RARLANGVFLKLETCEAGWCRVHAGEYRGWLPATSLWGAD 178
>gi|16127951|ref|NP_422515.1| hypothetical protein CC_3721 [Caulobacter crescentus CB15]
gi|221236773|ref|YP_002519210.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
gi|13425491|gb|AAK25683.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965946|gb|ACL97302.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
Length = 181
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+A + +PR+V++K + N+R GP + ++ Y KGLPV+VV E WR+
Sbjct: 32 VAAQGPRVTPSGLEVPRYVSLKYAEVNARNGPDEAHQLLWVYHAKGLPVQVVAETREWRR 91
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
I D +G + W++K G+RSA+ P + L P + + A ++ + +
Sbjct: 92 ICDPEGGLAWVHKRTTDGRRSAM-------RVQPTNLALLSAPKDGAKVNAYLKARAVAS 144
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ +C WC + GW ++ +IWG P
Sbjct: 145 LDKCENGWCRLRADGSSGWAREGEIWGADP 174
>gi|254419849|ref|ZP_05033573.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186026|gb|EDX81002.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 190
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSH---EKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + L+ LAI A + + +PR++++K+S +R GPG+
Sbjct: 8 IFQSLRRRSALALAILGVGLMAGAGATMPDGRPTPTGLEVPRWISLKSSHVRARQGPGLD 67
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y ++ Y GLPV+VV E WR+I D DG + WI++++ SG+RS +P
Sbjct: 68 YPILWEYRAAGLPVQVVAETTEWRKICDPDGAVAWIHRTVSSGRRSVF-------NTSPE 120
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ ++ S + A++ P L+++ EC WC GW++++ ++G
Sbjct: 121 EVMIHAGKSQASAVRARLSPRSLVSLDECEDGWCQVRARRLRGWVQERAVFG 172
>gi|295691506|ref|YP_003595199.1| hypothetical protein Cseg_4171 [Caulobacter segnis ATCC 21756]
gi|295433409|gb|ADG12581.1| protein of unknown function DUF1058 [Caulobacter segnis ATCC 21756]
Length = 178
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ +PR+V++K + N+R GP + ++ Y KGLPV+VV E WR+I D +
Sbjct: 34 PRITPSGLEVPRYVSLKYAEVNARKGPDEAHQLLWVYRAKGLPVQVVAETREWRRICDPE 93
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + W+++ + G+RSA+ P + L P + I A ++ + + +C
Sbjct: 94 GGLAWVHRRTVDGRRSAM-------RVQPTNLPLLSAPKDGAKINAYLKSRSVAALDKCE 146
Query: 165 GEWCFGYNLDTEGWIKKQKIWGIYP 189
WC GW ++++IWG P
Sbjct: 147 DGWCRLRADGASGWAREREIWGADP 171
>gi|148557478|ref|YP_001265060.1| hypothetical protein Swit_4584 [Sphingomonas wittichii RW1]
gi|148502668|gb|ABQ70922.1| protein of unknown function DUF1058 [Sphingomonas wittichii RW1]
Length = 160
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 8/163 (4%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + L L ++ E E++ +P + +I A R GP Y Y + LPV+VV
Sbjct: 6 LGWTLLGALLIAGAGEAQERR-VPYWASIATGDALLRTGPERTYPATWRYRRRDLPVQVV 64
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ Y NWR+IR+ DGT GW+ +LLS R+A+V+ ++ P S + +
Sbjct: 65 QVYGNWRRIREQDGTEGWMLATLLSATRTAVVTG-------DAPAEMHADPSSGSGLNWR 117
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
EPGV+ I +C +WC G+I+ + I+G+ PGEV +
Sbjct: 118 AEPGVVGRISKCESDWCLFDVGGKRGYIQIEHIYGVDPGEVVE 160
>gi|315497812|ref|YP_004086616.1| hypothetical protein Astex_0780 [Asticcacaulis excentricus CB 48]
gi|315415824|gb|ADU12465.1| protein of unknown function DUF1058 [Asticcacaulis excentricus CB
48]
Length = 222
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEI-------FEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + L++ + + + K+P+PR+ +++++ +R GP
Sbjct: 37 RAAVLALSLGMVCSGVAPAAQAGSAEEESFNTPSKQPVPRWASLRSNEVYARSGPTKENK 96
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V+ TY K LPV+++ E WR I D DG I W+++S+L +RS + + I
Sbjct: 97 VLWTYRQKNLPVQIISETREWRMICDPDGGIAWVSRSMLKSQRSVVSMGTQK-------I 149
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+L + + A++ P L + +C +C + +GW + ++WG G K
Sbjct: 150 DLLSAAKPTAKVKARLNPRSLAALDKCRKGYCKVSVGNVDGWAPQDRLWGAQEGAACK 207
>gi|332186855|ref|ZP_08388597.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
gi|332013188|gb|EGI55251.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
Length = 162
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ + L + EK+ +P + +I AS A R GP Y TY
Sbjct: 1 MTGLAGMAVMLMAGPIAAPAAAAPEKRAMPYYGSIGASLARMRTGPARAYPASWTYRRPD 60
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LPV+VV ++ WR+++D DGT GW+ LL R+AIV + + + P
Sbjct: 61 LPVKVVAAFKEWRKVQDPDGTEGWMLAVLLRNTRTAIV-------RSSEPLPMRSAPSDD 113
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ + + PGV+ I EC+G WC G++ IWG+ PGE
Sbjct: 114 AKTLWRAAPGVVGRISECNGGWCRLDVKGQAGFVPVGAIWGVEPGETL 161
>gi|94498704|ref|ZP_01305255.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
gi|94421867|gb|EAT06917.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
Length = 152
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A+ + +LA S KK P + ++ A R+GP + Y Y + LPV+
Sbjct: 1 MAVGGAVLLVLAASSANAAPGKK-TPYWASLSHDEARMRVGPSLDYPSNWVYRRRDLPVK 59
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
VV+ WR+++D DG GW++ LLS +AIV L+ P S +
Sbjct: 60 VVQVLGLWRKVQDPDGAQGWMHVRLLSDTPTAIVRSA--------IAPLHGSPSDGSATL 111
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+ E GV+ I +CSG WC G++K IWG G
Sbjct: 112 FRAERGVVGRISDCSGGWCAFDVKGRRGYVKASDIWGAIDG 152
>gi|149184645|ref|ZP_01862963.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
gi|148831965|gb|EDL50398.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
Length = 155
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + +P + +++A+ N R+GP Y + Y KGLPV+VV+ E WR I D DG
Sbjct: 18 PAQAQDREVPYWASLRANEINMRVGPSADYKIDWVYRRKGLPVKVVRVMEGWRLIEDPDG 77
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T GW+ LL R A+V + + D + I ++ PGV+ T+ +C+
Sbjct: 78 TRGWVASRLLDPARGAMVIG-------KDAAPMREDADASAPIKWQLAPGVVGTLGDCAR 130
Query: 166 EWCFGYNLDTEGWIKKQKIWGI 187
WC GW+++ ++WG
Sbjct: 131 GWCEMSVGKRSGWVRQTQLWGA 152
>gi|218674984|ref|ZP_03524653.1| hypothetical protein RetlG_27915 [Rhizobium etli GR56]
Length = 151
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/140 (45%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L P+ A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASLGPVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + I+
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTRARGIF 120
Query: 136 INLYKKPDIQSIIVAKVEPG 155
+NL ++ + I+AK+EP
Sbjct: 121 VNLRREAQPSASIIAKLEPR 140
>gi|167649014|ref|YP_001686677.1| hypothetical protein Caul_5059 [Caulobacter sp. K31]
gi|167351444|gb|ABZ74179.1| protein of unknown function DUF1058 [Caulobacter sp. K31]
Length = 182
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+PR+V++K N+R+GP + ++ Y KGLPV+VV E WR+I D +G +
Sbjct: 42 TPSGMDVPRYVSLKYGEVNARVGPDEEHRLLWIYKAKGLPVQVVAETREWRRICDPEGGL 101
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
W++K + G+R+A+ + L +P + I A + + C W
Sbjct: 102 SWVHKRTIDGRRTAM-------RVQAAALPLRAQPKANARITAYLAGRATAGLDRCEKGW 154
Query: 168 CFGYNLDTEGWIKKQKIWGI 187
C GW + +IWG
Sbjct: 155 CRLKADGESGWAPESEIWGA 174
>gi|85374170|ref|YP_458232.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
gi|84787253|gb|ABC63435.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
Length = 156
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI L +LA +++ +P + +I + N R+GP Y + + +GLPV+V
Sbjct: 5 AILIPLCLVLAACGSAAA-QQREVPYWASINTTELNMRVGPSTEYRIQWVFKREGLPVKV 63
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
++ + WR I D G GW+ +LS +R +V+ + P S +
Sbjct: 64 LRLKDGWRYIEDPVGDQGWVAARMLSTERGGVVTGEG-------LAPMRAAPADNSSLKW 116
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+EPGV+ T+ +C WC EG++ + ++WG
Sbjct: 117 NLEPGVVGTLGDCEAGWCVFSVEGREGYVPEARLWGA 153
>gi|296283826|ref|ZP_06861824.1| hypothetical protein CbatJ_09396 [Citromicrobium bathyomarinum
JL354]
Length = 160
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F LA L + + P + TI + AN R+GP Y + Y KGLP
Sbjct: 6 FLLATGLALTIATLTATPAGG-ANRGTPYWATIDVTEANMRVGPSAEYRIEWVYKRKGLP 64
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V+VV+ E WR + D DG GWI LLS R AIV ++ S
Sbjct: 65 VKVVRVREGWRLVEDPDGDQGWIAARLLSRTRGAIVVGKG-------LAEMHDSDAAGSA 117
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
I K+EPGV+ + +C WC + G+++ ++WG
Sbjct: 118 IKWKLEPGVVGRLGDCEENWCEFSVGERSGFVEANRLWGA 157
>gi|197103496|ref|YP_002128873.1| hypothetical protein PHZ_c0030 [Phenylobacterium zucineum HLK1]
gi|196476916|gb|ACG76444.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 172
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
E+ P+PR++++K + N+R GPG + ++ Y +GLPV+VV E WR+I D +
Sbjct: 30 ERATPSGLPVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETSEWRRICDPE 89
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + W+++ + G+RS + P L +KP + VA + P + ++ C
Sbjct: 90 GGLAWVHRRVTDGRRSVM-------NLQPAAAPLLRKPKAGAETVAYLRPKAMASLVRCQ 142
Query: 165 GEWCFGYNLDTEGWIKKQKIWG 186
WC GW+++ +WG
Sbjct: 143 KGWCKVKADRATGWVREGALWG 164
>gi|148261161|ref|YP_001235288.1| hypothetical protein Acry_2170 [Acidiphilium cryptum JF-5]
gi|326404565|ref|YP_004284647.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
gi|146402842|gb|ABQ31369.1| protein of unknown function DUF1058 [Acidiphilium cryptum JF-5]
gi|325051427|dbj|BAJ81765.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
Length = 177
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKE------IFEKKPLPRFVTIKASRANSRIGP 71
M + + + + + L A P+PRF + ++ R GP
Sbjct: 1 MRASSRLARLGLVVVALALGAWHAPKVGPGPGPGKGSATGWPVPRFESFRSREIYMRAGP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y ++ Y LPVEV E+ WR + DG GW++++LL G RS IV
Sbjct: 61 GFQYPIIWVYHRLDLPVEVTGEFNVWRHVVAPDGGDGWVHEALLHGLRSFIVIGGRH--- 117
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
L P + VA ++ GV+ IR C WC GW+++ + WG +
Sbjct: 118 -----TLRAGPHKDAAPVAYLDKGVIGVIRRCKAGAAWCQVEVDHRAGWLRRDQFWGSFA 172
Query: 190 GEVFK 194
GE K
Sbjct: 173 GEAIK 177
>gi|162147086|ref|YP_001601547.1| hypothetical protein GDI_1291 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785663|emb|CAP55234.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 300
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 58/222 (26%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI P A + +K PLPRF ++A N R GPG Y + Y + LPV++
Sbjct: 78 AIPSPPGPADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKI 137
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV--------------------------- 123
+E++ WR + D DG GW++++ L G R+ +V
Sbjct: 138 EREFDVWRLVEDSDGQKGWVHQATLVGARTFVVPGLPPVDPASDAAAQGASAQGAPARSG 197
Query: 124 -------------SPWNRKTNNPIYINLYKKPDIQSII----------------VAKVEP 154
P + + P + I VA ++P
Sbjct: 198 TAPAGGKPAAPTPQPGPGGHFDTTVVGHLADPAAAATIPGAVILRAAADAASAVVAVLKP 257
Query: 155 GVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
G + T R C+ WC GW+ + +WG+ P E +
Sbjct: 258 GSVGTFRTCAAGTTWCRVSVQHYSGWLDRSSVWGLLPQETIQ 299
>gi|307293235|ref|ZP_07573081.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
gi|306881301|gb|EFN12517.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
Length = 154
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + + KP+P + ++ A R+GP + Y Y + LPV+VV
Sbjct: 5 LGAGILAAACWAGVASASPAKPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVV 64
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ WR++ D GT GW++ LLS +AIV+ + P + + +
Sbjct: 65 QVLGLWRKVEDSSGTQGWMHVRLLSDTPTAIVT--------ADIAPMRDSPSEDARPLFR 116
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ GV+ + C WC +G+++ IWG
Sbjct: 117 AQKGVVGRLGSCGKGWCAFDVGGRKGFVRAGDIWGA 152
>gi|209544146|ref|YP_002276375.1| hypothetical protein Gdia_2000 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531823|gb|ACI51760.1| protein of unknown function DUF1058 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 367
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 58/222 (26%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI P A + +K PLPRF ++A N R GPG Y + Y + LPV++
Sbjct: 145 AIPSPPGPADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKI 204
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV--------------------------- 123
+E++ WR + D DG GW++++ L G R+ +V
Sbjct: 205 EREFDVWRLVEDSDGQKGWVHQATLVGARTFVVPGLPPVDPASDAAAQGASAQGAPARSG 264
Query: 124 -------------SPWNRKTNNPIYINLYKKPDIQSII----------------VAKVEP 154
P + + P + I VA ++P
Sbjct: 265 TAPAGGKPAAPTPQPGPGGHFDTTVVGHLADPAAAATIPGAVILRAAADAASAVVAVLKP 324
Query: 155 GVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
G + T R C+ WC GW+ + +WG+ P E +
Sbjct: 325 GSVGTFRTCAAGTTWCRVSVQHYSGWLDRSSVWGLLPQETIQ 366
>gi|294012311|ref|YP_003545771.1| hypothetical protein SJA_C1-23250 [Sphingobium japonicum UT26S]
gi|292675641|dbj|BAI97159.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 156
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + L + KP+P + ++ A R+GP + Y Y + LPV+VV
Sbjct: 7 LGAGMVAALCWTGGAWAAPAKPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVV 66
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ WR++ D GT GW++ LLS +AIV+ + P + +
Sbjct: 67 QVLGLWRKVEDPSGTQGWMHVRLLSDTPTAIVT--------ADIAPMRDSPSEDGRALFR 118
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ GV+ + C WC +G+++ IWG
Sbjct: 119 AQKGVVGRLSSCGKGWCAFDVGGQKGFVRASDIWGA 154
>gi|42520974|ref|NP_966889.1| hypothetical protein WD1176 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58699599|ref|ZP_00374297.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|42410715|gb|AAS14823.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58533884|gb|EAL58185.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 163
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS
Sbjct: 41 FVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLS 100
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
KR AIV Y+K + S I K++ V++ I +C+ EWCF +
Sbjct: 101 DKRYAIVKEDTYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRK 151
Query: 177 GWIKKQKIWGIY 188
W++K+ I+G+
Sbjct: 152 AWVQKKHIYGVD 163
>gi|225630845|ref|YP_002727636.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
gi|225677456|ref|ZP_03788419.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590502|gb|EEH11766.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225592826|gb|ACN95845.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
Length = 162
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS
Sbjct: 40 FVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLS 99
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
KR AIV Y+K + S I K++ V++ I +C+ EWCF +
Sbjct: 100 DKRYAIVKEDTYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRK 150
Query: 177 GWIKKQKIWGIY 188
W++K+ I+G+
Sbjct: 151 AWVQKKHIYGVD 162
>gi|329891074|ref|ZP_08269417.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846375|gb|EGF95939.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
Length = 168
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L+ + + +PR+VT+K+S+ +R GPG+ Y ++ Y GLPV+V+ E
Sbjct: 5 LLSAGSTMPDGRPTPTGLEVPRWVTLKSSQVRARQGPGLDYRILWEYRAAGLPVQVIAET 64
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
WR+I D DG++ WI++++ SG+RS + + + + + A + P
Sbjct: 65 REWRKICDPDGSVAWIHRTVASGRRSVF-------NRSDEAVPIRSGRSETASVRALLSP 117
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
L+ + EC WC GW+ ++ ++G
Sbjct: 118 RALVPLDECEDGWCRVRARKLRGWVAERAVFG 149
>gi|114797532|ref|YP_762107.1| hypothetical protein HNE_3434 [Hyphomonas neptunium ATCC 15444]
gi|114737706|gb|ABI75831.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 31 AIYFYLAPILALSHEKEI------FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ P+ + F KKP+PRF T++ + N R GP + + Y K
Sbjct: 23 TVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYNRK 82
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GLPV VVKE W ++RD G WI+ +L+ +A+V+ L PD
Sbjct: 83 GLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAMVT---------RTAVLASSPDR 133
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VA++ GVL+ + C C GW+ + +WG G K
Sbjct: 134 SGEGVAELGKGVLVEVTACEAALCEVEAAGYRGWMPRASLWGASTGPAGK 183
>gi|330813307|ref|YP_004357546.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486402|gb|AEA80807.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 156
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++++K ++ N RI P + Y K PV ++ +Y NWR+I+DF+ GW++ S L
Sbjct: 26 KYLSLKNNKVNVRIAPSRTAPIKWIYEKKSFPVIIIDQYYNWRKIKDFENDSGWVHISQL 85
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S KRS + + ++KKP S + K+ + I+ECS WC N
Sbjct: 86 SRKRSVLFV--------KDEVLIFKKPTTYSRPIYKIGKLEVAVIKECSLNWCNVKNNLF 137
Query: 176 EGWIKKQKIWGIYPGEVF 193
GW++K +WG+ E+
Sbjct: 138 SGWVEKNSLWGLNKNEIM 155
>gi|299529214|ref|ZP_07042659.1| SH3, type 3 [Comamonas testosteroni S44]
gi|298722837|gb|EFI63749.1| SH3, type 3 [Comamonas testosteroni S44]
Length = 157
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +++ +SLI A+ L P LA + E FV+IK + N R P
Sbjct: 1 MPCNRWIRTAATSSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ L+KG P++V + W +++D + T+GW++ L S +V+
Sbjct: 50 NTRSATLWE-LSKGYPLQVTQRKGQWLRVKDHESTLGWVHAPLTSKSPHMVVT------- 101
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
NL P + V K+E +L + G W + GW+ K +WG
Sbjct: 102 -ARTANLRSGPGQKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|264679109|ref|YP_003279016.1| SH3, type 3 [Comamonas testosteroni CNB-2]
gi|262209622|gb|ACY33720.1| SH3, type 3 [Comamonas testosteroni CNB-2]
Length = 157
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +++ +SLI A+ L P LA + E FV+IK + N R P
Sbjct: 1 MPCNRWIRTAATSSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ L+KG P++V + W +++D++ T+GW++ L S +V+
Sbjct: 50 NTRSATLWE-LSKGYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHMVVT------- 101
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
NL P + V K+E +L + G W + GW+ K +WG
Sbjct: 102 -ARTANLRSGPGQKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|302381693|ref|YP_003817516.1| hypothetical protein Bresu_0578 [Brevundimonas subvibrioides ATCC
15264]
gi|302192321|gb|ADK99892.1| protein of unknown function DUF1058 [Brevundimonas subvibrioides
ATCC 15264]
Length = 170
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ +PR+V++K+S +R GPG+ Y ++ Y GLPV+V+ E WR+I D +
Sbjct: 18 RPTPTGLDVPRWVSLKSSHVRARQGPGLDYRILWEYRAAGLPVQVIAETREWRKICDPEL 77
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ WIN+S++SG+R + + ++ + QS + A+ ++ + +C
Sbjct: 78 GVAWINRSVVSGRRGVF-------NDTGAEVAVHAARNAQSPVRARFSAHSIVALDDCKD 130
Query: 166 EWCFGYNLDTEGWIKKQKIWGIYP 189
WC +GW+ + ++G P
Sbjct: 131 GWCRVRARKLKGWLPEGAVFGTQP 154
>gi|326387467|ref|ZP_08209076.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208123|gb|EGD58931.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
Length = 165
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEK-EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
L+ +L L + +++L E P +V+++ S N R+GPG Y +
Sbjct: 2 RLRAALAACLTVLAATGAVVSLRPAPVHAAEDGGAPYWVSLRNSLTNMRVGPGRDYRINW 61
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
Y+ G+P++V+++ E W + D +G GW+ ++ K +
Sbjct: 62 VYVRAGVPLKVLRQMEGWVLVEDSEGARGWMLTQFVARKAH-------TGIVKGGIAEIR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ D ++ + PGV+ I +CS WC +G++++ +WG
Sbjct: 115 ENKDGSGALLWRAAPGVIARIGDCSAGWCKVDIDGRQGYVRQDAVWGA 162
>gi|221066296|ref|ZP_03542401.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
gi|220711319|gb|EED66687.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
Length = 157
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +++ +SLI A+ L P LA + E FV+IK N R P
Sbjct: 1 MSCNRWIRTAATSSLIALGALTAGLLPALAQAQE-----------FVSIKGKTVNVRERP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ L+KG P++V + W +++D++ T+GW++ L S +V+
Sbjct: 50 NTRSATLWE-LSKGYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHMVVT------- 101
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
NL P + V K+E +L + G W + GW+ K +WG
Sbjct: 102 -ARTANLRSGPGQKHNRVGKLEQYEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|87200321|ref|YP_497578.1| hypothetical protein Saro_2307 [Novosphingobium aromaticivorans DSM
12444]
gi|87136002|gb|ABD26744.1| protein of unknown function DUF1058 [Novosphingobium
aromaticivorans DSM 12444]
Length = 173
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+P +V+ +AN R+GPG Y + TY+ KG+P++V++ WR + D DG GWI
Sbjct: 45 VPYWVSTSKDKANMRVGPGRDYRISWTYVRKGVPLKVLRVMGGWRLVEDPDGARGWILAQ 104
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LS +R+ IV L +K D ++ +V PGV+ +++C WC
Sbjct: 105 FLSRERAGIVKGGVTG--------LREKKDGSGRLLWRVAPGVIGKVKDCDDGWCAFDVG 156
Query: 174 DTEGWIKKQKIWGI 187
+G+++ +WG
Sbjct: 157 GRKGYVRASSVWGA 170
>gi|329847681|ref|ZP_08262709.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
gi|328842744|gb|EGF92313.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
Length = 196
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A E + K +PR+ + + N+R GP + V TY G+PV+++ E +WR
Sbjct: 42 AADPVEYDTPSKAVVPRWAMLGKNEVNARNGPSLDNRKVWTYRKAGVPVQIISETRDWRL 101
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
I D G + W+ KS+L R+ I + + P + + A V P + T
Sbjct: 102 ICDPAGGVAWVKKSMLRSPRNVITPTQK--------LEIRTDPKADADVRAIVRPRSIAT 153
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWG 186
I C +WC GW K +WG
Sbjct: 154 IETCKDDWCKISVAGQTGWAPKTVLWG 180
>gi|71083107|ref|YP_265826.1| hypothetical protein SAR11_0402 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062220|gb|AAZ21223.1| Conserved hypothetical protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 149
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I +AI+F +L +F+++K S+ N R GP + Y
Sbjct: 1 MIKKIAIWFLCLSVLFGQFSMAEE------KFLSLKKSKVNVRYGPSFDSKIKYIYKKIN 54
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LP++ + + EN+R+I D GWI+ S + S I+ LYKKP
Sbjct: 55 LPIKQIDQKENFRRIVDLKNNSGWIHISQIKKSNSIIILEDKI---------LYKKPSNF 105
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
S +AK+E G LL +++C WC D GWIK + IWG
Sbjct: 106 SKPIAKLEKGRLLILKKCENIWCNVKTEDYSGWIKTENIWG 146
>gi|91762467|ref|ZP_01264432.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718269|gb|EAS84919.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 149
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I +AI+F +L +F+++K S+ N R GP + Y
Sbjct: 1 MIKKIAIWFLCLSVLFGQFSMAEE------KFLSLKKSKVNVRYGPSFDSKIKYIYKKIN 54
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LP++ + + EN+R+I D GWI+ S + S I+ LYKKP
Sbjct: 55 LPIKQIDQKENFRRIVDLKNNSGWIHISQIKKSNSIIILEDKI---------LYKKPSNF 105
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
S +AK+E G LL +++C WC D GW+K + IWG
Sbjct: 106 SKPIAKLEKGRLLILKKCENIWCNVKTEDYSGWVKTENIWG 146
>gi|103486271|ref|YP_615832.1| hypothetical protein Sala_0779 [Sphingopyxis alaskensis RB2256]
gi|98976348|gb|ABF52499.1| protein of unknown function DUF1058 [Sphingopyxis alaskensis
RB2256]
Length = 113
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GP I V+ Y K LPV+V+ +ENWR++ D DG GW+ LLS R+AIV+
Sbjct: 1 MRKGPSIDVPVLWEYRRKDLPVKVIARHENWRRVEDPDGARGWMAARLLSRTRTAIVTGA 60
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
R + ++P + + + PGV+ I +C WC +GWI+ IWG
Sbjct: 61 IR--------PMREEPSTTAAVAYRAAPGVVGRITDCQNGWCRFDVKGRKGWIQTDHIWG 112
>gi|320352151|ref|YP_004193490.1| hypothetical protein Despr_0005 [Desulfobulbus propionicus DSM
2032]
gi|320120653|gb|ADW16199.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ A++ +L L E V+I N R GPG + V+ ++ G
Sbjct: 1 MTLRRALFACTVSLLLLVRSVAAAE------MVSIAGEEINMRSGPGTEHEVLWK-ISDG 53
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P+EV+ +W Q++DF+G+ GW++K IV IN+ ++P +
Sbjct: 54 FPLEVLATKGDWLQVQDFEGSSGWVHKKTTRATPHMIV---KANRGTAQQINVRREPSTK 110
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKIWG 186
+ +VA GV+ E G W + GW++ +WG
Sbjct: 111 AAVVATASYGVVFKTLERQGTWVKVEHGQGVTGWVEGSLLWG 152
>gi|297570264|ref|YP_003691608.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296926179|gb|ADH86989.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 151
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L+++F + +L L + E V++ + N R GPG ++++ L KG P+
Sbjct: 7 ALSLFFAVLFLLGLVTAAQAIE------MVSVDRPKINMRSGPGTNHSILWE-LGKGYPL 59
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
V+ NW ++RDF+G GW+ + L+ +V N+ P + +
Sbjct: 60 MVIGRQGNWMKVRDFEGDEGWVYQPLVGRTPHLVVKVP--------VANIRSGPGTRYRL 111
Query: 149 VAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
V + GV+L E W + GW+ + +WG
Sbjct: 112 VGQARYGVVLQTMERGSGWVKVRHENGLTGWMSRDLLWG 150
>gi|158520363|ref|YP_001528233.1| hypothetical protein Dole_0346 [Desulfococcus oleovorans Hxd3]
gi|158509189|gb|ABW66156.1| protein of unknown function DUF1058 [Desulfococcus oleovorans Hxd3]
Length = 149
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L F + I AL F ++ L ++ A+ AN R GPG Y K P
Sbjct: 4 LRLFQSFCMVFICALLVAAPAFSQERL----SVTATTANIRTGPGTSYDKAWQ-AEKNYP 58
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV++ + W + +D++G GWI +L+S + IV +N+ P
Sbjct: 59 VVVVEKKDGWVKFKDYEGDEGWIYGALVSATSTVIV--------KKTRVNVRSGPGTNHP 110
Query: 148 IVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIW 185
+V + E GV + + G+W + GWI + +W
Sbjct: 111 VVFEAEKGVPFEVIKNDGDWLQIKHADGDTGWIYRPLVW 149
>gi|58699523|ref|ZP_00374245.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58533960|gb|EAL58237.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 148
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS
Sbjct: 41 FVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLS 100
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
KR AIV Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 101 DKRYAIVKEDTYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLS 146
>gi|58699352|ref|ZP_00374124.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534130|gb|EAL58357.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 145
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+ K+++ N R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS
Sbjct: 41 FVSTKSNKINMRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLS 100
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
KR AIV Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 101 DKRYAIVKEDTYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFL 145
>gi|99036078|ref|ZP_01315112.1| hypothetical protein Wendoof_01000031 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 113
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 1 MRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKED 60
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
Y+K + S I K++ V++ I +C+ EWCF + W++K+ I+G
Sbjct: 61 TYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYG 111
Query: 187 IY 188
+
Sbjct: 112 VD 113
>gi|94263262|ref|ZP_01287078.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93456345|gb|EAT06469.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V+I + N R GPG ++++ L KG P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 30 EMVSIDRPKVNMRDGPGTNHSILWE-LGKGYPLMVIGRQGNWLKVRDFEDDEGWVYQPLV 88
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+V +N+ P + +V + + GV+L E W +
Sbjct: 89 GRTPHLVVKV--------RIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENG 140
Query: 175 TEGWIKKQKIWG 186
GW+ + +WG
Sbjct: 141 LTGWVSRSLLWG 152
>gi|94271443|ref|ZP_01291956.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93450440|gb|EAT01626.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V+I + N R GPG ++++ L KG P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 30 EMVSIDRPKVNMRGGPGTNHSILWE-LGKGYPLMVIGRQGNWLKVRDFEDDEGWVYQPLV 88
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+V +N+ P + +V + + GV+L E W +
Sbjct: 89 GRTPHLVVKV--------RIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENG 140
Query: 175 TEGWIKKQKIWG 186
GW+ + +WG
Sbjct: 141 LTGWVSRSLLWG 152
>gi|320354278|ref|YP_004195617.1| SH3 type 3 domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122780|gb|ADW18326.1| SH3 type 3 domain protein [Desulfobulbus propionicus DSM 2032]
Length = 149
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 12/160 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ F I +LA + +V++ N R GP ++ L G
Sbjct: 1 MTFRPLIKTIPLSLLASAFAVSTVLGA---EYVSVVKDGVNLRSGPNTNTDILYQ-LPSG 56
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P+E++ + W ++ D++G G+I +SL+S IV N+ P
Sbjct: 57 YPLEILSKEGQWLKVSDYEGDKGYITESLVSKTPYVIVKVKE--------CNIRSGPSAN 108
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+V K V+ E G+W + D GW++K +W
Sbjct: 109 DSVVGKGVKDVIFKKVEQKGDWIKISHPDLTGWVQKDLVW 148
>gi|224368207|ref|YP_002602370.1| hypothetical protein HRM2_10940 [Desulfobacterium autotrophicum
HRM2]
gi|223690923|gb|ACN14206.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 155
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 22 LQNSLIFTLAIYFYLAPIL---ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
L + +AI+F + A + E+ I + AN R GPG Y +
Sbjct: 8 LCRDITLCVAIFFCMGAWFCQGAWAQERRC-----------ITSKIANVRSGPGTNYETL 56
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ P+ +V++ ++W + +DF+G +GWI+ SL+ S I N N+
Sbjct: 57 WQ-VETYYPILIVEKKDSWLKFKDFEGDMGWIHGSLVGDAPSVITVKSN--------CNV 107
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIW 185
P IV VE GV + + +W + D GWI K +W
Sbjct: 108 RSGPGPVHPIVFTVERGVPFKVLKQQSDWLEVEHGDGDRGWIYKPLVW 155
>gi|317051679|ref|YP_004112795.1| hypothetical protein Selin_1506 [Desulfurispirillum indicum S5]
gi|316946763|gb|ADU66239.1| protein of unknown function DUF1058 [Desulfurispirillum indicum S5]
Length = 147
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V + R N R P V+ T L K P++V+K+ NW Q+ DF+G GWI+ S+ +
Sbjct: 23 YVAVTGDRVNLRAQPSTNAEVLWT-LGKYFPLKVLKQQGNWYQVEDFEGDKGWIHNSVAN 81
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+ ++ N +N+ S I+ + GV I W +
Sbjct: 82 KENRGVIVIRNN-------VNVRSSNSTNSDILFRTSYGVAFRIIGQRSNWYQVEHPDGH 134
Query: 176 EGWIKKQKIWGI 187
+GWI+ +WG
Sbjct: 135 QGWIRGDLLWGA 146
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R V + + N R ++ + G+ ++ + NW Q+ DG GWI LL
Sbjct: 85 RGVIVIRNNVNVRSSNSTNSDILFR-TSYGVAFRIIGQRSNWYQVEHPDGHQGWIRGDLL 143
>gi|218779807|ref|YP_002431125.1| hypothetical protein Dalk_1961 [Desulfatibacillum alkenivorans
AK-01]
gi|218761191|gb|ACL03657.1| protein of unknown function DUF1058 [Desulfatibacillum alkenivorans
AK-01]
Length = 143
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ TLA+ F L P LA + +++ +AN R GPG Y ++ + +
Sbjct: 4 IVCTLAVLFLLMPGLAFAKR------------MSVAVDKANIRSGPGTNYDIIFR-VERY 50
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
PV V +W + D DG GW++K+LL +S I + N+ P
Sbjct: 51 FPVLVEDCVNDWCRFTDVDGQAGWLHKNLLDDVKSVITT--------KDKCNVRSGPGTN 102
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIW 185
+ VA VE GV + G W + GWI +W
Sbjct: 103 NKKVAIVEAGVPFKVLTTKGRWIKVEHVSGVVGWIHASLVW 143
>gi|94266004|ref|ZP_01289726.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93453433|gb|EAT03852.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 157
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V+++ + N R GP + ++ + + P+++++ +W +I DF+G GWI LL
Sbjct: 31 EYVSVQREKVNIRSGPSTDHEILWE-VFRDFPLQILERRGDWARIVDFEGDEGWIYTPLL 89
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLD 174
+ IV N+ P ++A V GV+ E +W +
Sbjct: 90 GNDKRVIV--------QVETANMRVGPSTNYEVMATVRYGVVFEPIERRRDWLKVEHADG 141
Query: 175 TEGWIKKQKIWGIYPGEVF 193
T GWI + +W P E+
Sbjct: 142 TTGWITDRLLW---PSELI 157
>gi|239816373|ref|YP_002945283.1| hypothetical protein Vapar_3400 [Variovorax paradoxus S110]
gi|239802950|gb|ACS20017.1| protein of unknown function DUF1058 [Variovorax paradoxus S110]
Length = 153
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ ++S + L + F L+ + S + V+ A N R GPG Y T
Sbjct: 1 MFRSSRLPALLLAFVLSWVALPSASAAE------RQMVSSAAKTLNMRTGPGQRYEAHWT 54
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ +G P V+ +W ++ DF+ W+ + + S +V L +
Sbjct: 55 -VGRGYPFRVIGRKGDWLRVSDFENDKAWVYRPMTSKTPHHVV--------KAKVAVLRR 105
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
P +S +V + G +L E G+W + GW+ ++ +WG
Sbjct: 106 SPSTRSPVVKRAAYGDVLRTLERRGDWVKVRHEGGGTGWVARRLVWG 152
>gi|297568421|ref|YP_003689765.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924336|gb|ADH85146.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 166
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+++ + N R GPG + ++ + + P++V+ W QI DF+ GW+ L+
Sbjct: 41 YVSVQRDKINIRSGPGTDHEILWE-VFRDFPLKVISRQGEWAQIEDFEKDRGWVYTPLVG 99
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
++ IV NL P + A V GV+ E +W + T
Sbjct: 100 NEKRVIV--------QVEVANLRVGPGTNYEVKATVRYGVVFEPLERRRDWVKLQHSDGT 151
Query: 176 EGWIKKQKIW 185
GW+ +W
Sbjct: 152 TGWMSTNLLW 161
>gi|160898736|ref|YP_001564318.1| hypothetical protein Daci_3295 [Delftia acidovorans SPH-1]
gi|160364320|gb|ABX35933.1| protein of unknown function DUF1058 [Delftia acidovorans SPH-1]
Length = 158
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV++K + N R P + L KG P++VV+ W ++RD + T+GW++ L
Sbjct: 35 EFVSVKGTSVNVRQQPTTRSATLWE-LGKGYPLQVVQRKGQWLRVRDNESTLGWVHAPLT 93
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-D 174
+V+ NL P +V K+ ++ G W
Sbjct: 94 GKTPHMVVT--------GRTANLRAGPGQNHRVVGKLAEMEVVRTLRKQGSWAQVQRDNG 145
Query: 175 TEGWIKKQKIWG 186
+GW+ + WG
Sbjct: 146 QKGWVARSLTWG 157
>gi|319792897|ref|YP_004154537.1| hypothetical protein Varpa_2220 [Variovorax paradoxus EPS]
gi|315595360|gb|ADU36426.1| protein of unknown function DUF1058 [Variovorax paradoxus EPS]
Length = 154
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P + V+ N R GPG Y T ++KG P V+ +W + DF+
Sbjct: 22 PSASAAPQRQMVSAAVGTLNMRTGPGQRYESHWT-VSKGYPFRVIGRKGSWLHVSDFEND 80
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
WI + + + +V + L + P+ +S +V + G +L + G+
Sbjct: 81 KAWIYRPMTNKTPHHVV--------KAKAVVLRRSPNARSPVVRRAAYGDVLRTLQRRGD 132
Query: 167 WCFGYN-LDTEGWIKKQKIWG 186
W + GW+ ++ +WG
Sbjct: 133 WVKVTHEGGGTGWVARRLVWG 153
>gi|51246128|ref|YP_066012.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
gi|50877165|emb|CAG37005.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
Length = 156
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+FVTI N R GP +V L +G P+ VV + +W ++ D++ GW+ L+
Sbjct: 31 QFVTIAKDGVNIRKGPTTKEEIVME-LFEGWPLRVVNKKNDWYEVVDYEKDRGWVYAPLV 89
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+ IV+ N+ P S ++A+VE GV+LT W +
Sbjct: 90 RKNDTVIVNVKKTG-------NMRSGPGKNSPVIAEVERGVVLTRITVKDGWVKVKHSQG 142
Query: 175 TEGWIKKQKIW 185
+ GWI K +W
Sbjct: 143 SVGWIYKTLLW 153
>gi|121594156|ref|YP_986052.1| SH3 type 3 domain-containing protein [Acidovorax sp. JS42]
gi|222111126|ref|YP_002553390.1| sh3 type 3 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606236|gb|ABM41976.1| SH3, type 3 domain protein [Acidovorax sp. JS42]
gi|221730570|gb|ACM33390.1| SH3 type 3 domain protein [Acidovorax ebreus TPSY]
Length = 158
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+IK + N R P + L +G P++V + W Q+RDF+ +GW+ L
Sbjct: 35 EFVSIKGNAVNVREKPSTRSATLWE-LGRGYPLQVQQRKGRWLQVRDFEEPLGWVYAPLT 93
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLD 174
S +V+ NL P Q V K++ ++ SG W
Sbjct: 94 SKTPHRVVT--------ARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARVQREDG 145
Query: 175 TEGWIKKQKIWG 186
+GW+ ++ WG
Sbjct: 146 QKGWVARRLTWG 157
>gi|254478958|ref|ZP_05092318.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035104|gb|EEB75818.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 668
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + LP ++ N R GPG Y ++ T + K + V+ + +W +++ +G
Sbjct: 9 AAVSSTQNLPSYLVTTGDYVNIRKGPGTQYGII-TQVNKNTLLNVLDKSGDWYKVKLQNG 67
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T+GWI L +A P + K N +N+ K P I+ + + G +L++ SG
Sbjct: 68 TVGWIAGWL-----TATPLPSSIKV-NANDVNIRKGPGTNYGIITQAKKGTVLSVLGKSG 121
Query: 166 EWCFGYN-LDTEGWIKKQKIWGIYPGEV 192
+W T GWI W + P +
Sbjct: 122 DWYKVKLPNGTTGWIAG---WLVIPNDT 146
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F+ I N R GPG Y ++ T LT+G +E++ E W ++R DG IGW+ L++
Sbjct: 323 FLMITGDVVNIRNGPGTQYDII-TQLTRGYILEMLDASEEWYKVRLKDGRIGWVAGWLVT 381
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
I+ GV +I
Sbjct: 382 VYERIGNESTQIVDRRTGTTPSRGDIGQALSILPYAGKGVWYSI 425
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
SA + +N+ P Q I+ ++ G +L + + S EW D GW
Sbjct: 315 SATPNSSTFLMITGDVVNIRNGPGTQYDIITQLTRGYILEMLDASEEWYKVRLKDGRIGW 374
Query: 179 IK 180
+
Sbjct: 375 VA 376
>gi|319762489|ref|YP_004126426.1| sh3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|330825660|ref|YP_004388963.1| SH3 type 3 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117050|gb|ADU99538.1| SH3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|329311032|gb|AEB85447.1| SH3 type 3 domain protein [Alicycliphilus denitrificans K601]
Length = 158
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV+IK++ N R P L +G P++V + W ++RDF+ ++GW+ L
Sbjct: 35 EFVSIKSNAVNVRAQPTTRSDTRWE-LGRGYPLQVEQRRGQWLKVRDFEESLGWVFAPLT 93
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S +V+ L P Q IV ++ ++ SG W
Sbjct: 94 SKTPHRVVT--------APSARLRAGPGTQHKIVGTLQQHEVVRSLGQSGAWAKVQRDGG 145
Query: 176 E-GWIKKQKIWG 186
+ GW+ K+ WG
Sbjct: 146 QKGWVAKRLTWG 157
>gi|323490012|ref|ZP_08095233.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
gi|323396308|gb|EGA89133.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
Length = 525
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
I S I +A F L + +F V I + N R GPG+ Y+V
Sbjct: 6 SIAIISFILFIAASFPLL------DKNHVFADTGT---VEITGTTVNVRSGPGLSYSVTG 56
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L +G VV + ++W ++R DG GWI L + A + ++ +N+
Sbjct: 57 D-LEQGQTATVVSKQDDWLEVR-VDGQEGWIASWLTTESGDAEKASGQTAVSSVNGLNVR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+PD+ + ++ K+ G + +GEW ++ G++ KQ I
Sbjct: 115 SQPDLSAAVLTKMNAGDRAEVVSSAGEWIEINFRNSRGFVSKQYI 159
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 12/165 (7%)
Query: 37 APILALSHEKEIFEKKPLPRFVT---IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
P+ S E+ EKK V+ + + N R P + + + +G V+
Sbjct: 169 TPVETESKEEPQEEKKTAISKVSSFEVAVNALNVRSKPDLSSKIQ-ETVQQGQVFPVLSM 227
Query: 94 YENWRQIRDFDGTIGWIN--KSLLSGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
NW +I IGW+ LS + + NL S +
Sbjct: 228 AGNWVEIELAKDKIGWVYAFHGQLSDQTVETVQSDLNESVVILTDGTNLRTAATTSSEVA 287
Query: 150 AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGEVF 193
++ G L + +W ++ + W + E F
Sbjct: 288 SRANAGDKLAVLAKQDDWYQVSLPEGKTAFVAE---WVVSTEEAF 329
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 25/140 (17%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------ 116
+ N R P + V+ T + G EVV W +I +F + G+++K +S
Sbjct: 109 NGLNVRSQPDLSAAVL-TKMNAGDRAEVVSSAGEWIEI-NFRNSRGFVSKQYISFAEESE 166
Query: 117 ---------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
K++AI + + +N+ KPD+ S I V+ G + +
Sbjct: 167 EATPVETESKEEPQEEKKTAISKVSSFEV-AVNALNVRSKPDLSSKIQETVQQGQVFPVL 225
Query: 162 ECSGEWCFGY-NLDTEGWIK 180
+G W D GW+
Sbjct: 226 SMAGNWVEIELAKDKIGWVY 245
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I N R V G + V+ + ++W Q+ +G ++ + ++S
Sbjct: 267 VVILTDGTNLRTAATTSSEVASR-ANAGDKLAVLAKQDDWYQVSLPEGKTAFVAEWVVST 325
Query: 118 KRSAIVSPWNRKTNNPIYIN 137
+ + +N
Sbjct: 326 EEAFAKEQSETIVRKKGTLN 345
>gi|81428472|ref|YP_395472.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
gi|78610114|emb|CAI55163.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
Length = 440
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L ++ + L +H +++ +TIKA+ N R GPG+ Y + +KG
Sbjct: 13 AVLILFILVGVGLFATHVLATYQQ------ITIKANVVNVRQGPGLSYDTMGQ-ASKGEV 65
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ V+ + NW Q+R IGW+ L++ + T + N+ + + S
Sbjct: 66 MNVISQKNNWYQVRLSGDKIGWVASWLVNNTE-VSATSNRVATVTNDFANVRQSSNASSP 124
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ KV G LT+ W GW++ I
Sbjct: 125 LLGKVNKGDKLTVLYQQNGWSQVKYNSAVGWVQSDLI 161
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 29/179 (16%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+A L + E R T+ AN R ++ + KG + V+ +
Sbjct: 88 VASWLVNNTEVSATSN----RVATVTNDFANVRQSSNASSPLLGK-VNKGDKLTVLYQQN 142
Query: 96 NWRQIRDFDGTIGWINKSLLS---GKRSAIVSPWNRK-------------TNNPIYINLY 139
W Q++ ++ +GW+ L+S +A+ + T L
Sbjct: 143 GWSQVK-YNSAVGWVQSDLISISNEAPTAVQTDTKTDDSSSQSTSDIKSVTTQLDNTKLR 201
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP---GEVFK 194
P + LT + S W + G++ W + P EV K
Sbjct: 202 SGPGVNYAYSQVYSANTKLTYLDKSDTWYKVKDSDGNTGYVAS---WVVTPSAKNEVVK 257
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
VT + R GPG+ Y Y + + + + + W +++D DG G++ ++
Sbjct: 191 VTTQLDNTKLRSGPGVNYAYSQVY-SANTKLTYLDKSDTWYKVKDSDGNTGYVASWVVTP 249
Query: 116 SGKRSAIVSPWNRKTNNPIYIN 137
S K + + + I ++
Sbjct: 250 SAKNEVVKTSATSLSEATIVLD 271
>gi|229552371|ref|ZP_04441096.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|258539742|ref|YP_003174241.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
gi|229314273|gb|EEN80246.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|257151418|emb|CAR90390.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
Length = 440
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ LA+ F + +++T+KA N R+GPG+ Y ++ + G
Sbjct: 12 LVILLALLFGVGAATTSVMANT--------QYMTVKAESVNVRLGPGLAYGIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A S N P +N+ +
Sbjct: 63 NELTIIGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP--VNVREYASQD 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G+W +T WI +
Sbjct: 121 AKQLGTLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 159
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A + K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP-----------VNVREYASQD 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ T L G V+VV + +W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGT-LNAGDSVKVVYQEGDWTQI-AYNNTAAWITSSSVQLTGQTTNLAQPAQANLTQ 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 AKSGAALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVTKQQDDWYQVTAPDGKSGYVA 238
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GI V L KG + V K+ ++W Q+ DG G++ ++ +
Sbjct: 194 NLRNAAGINAPSV-EKLDKGTELTVTKQQDDWYQVTAPDGKSGYVASWTVTAPNNGQTQK 252
Query: 126 WNRKTNNPIYI--NLYKKPDIQSI 147
K + + + D +
Sbjct: 253 AATKLSEATIVLDPGHGGTDTGAP 276
>gi|199599335|ref|ZP_03212733.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|258508561|ref|YP_003171312.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|199589774|gb|EDY97882.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|257148488|emb|CAR87461.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|259649868|dbj|BAI42030.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
Length = 440
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ LA+ F + +++T+KA N R+GPG+ Y ++ + G
Sbjct: 12 LVILLALLFGVGAATTSVMANT--------QYMTVKAESVNVRLGPGLAYGIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A S N P +N+ +
Sbjct: 63 NELTIIGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP--VNVREYASQD 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G+W +T WI +
Sbjct: 121 AKQLGTLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 159
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A + K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP-----------VNVREYASQD 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ T L G V+VV + +W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGT-LNAGDSVKVVYQEGDWTQI-AYNNTAAWITSSSVQLTGQTTNLAQPAQANLTQ 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 AKSGAALKVTTNTITNLRNAAGINAPSVEKLDKGTELTVTKQQDDWYQVTAPDGKSGYVA 238
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GI V L KG + V K+ ++W Q+ DG G++ ++ +
Sbjct: 194 NLRNAAGINAPSV-EKLDKGTELTVTKQQDDWYQVTAPDGKSGYVASWTVTAPNNGQTQK 252
Query: 126 WNRKTNNPIYI--NLYKKPDIQSI 147
K + + + D +
Sbjct: 253 AATKLSEATIVLDPGHGGTDTGAP 276
>gi|229543721|ref|ZP_04432781.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
gi|229328141|gb|EEN93816.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
Length = 487
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-S 116
VT+ + R GPG+ Y + K V+++ +W QIR G GWI L+ +
Sbjct: 32 VTVTHAAVYIRSGPGVSYPIAGK-AAKNDTYTVLQKDGDWFQIRLPQGNTGWIAGWLVET 90
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G SA + + + K PD + IV +E ++T+ G W + + +
Sbjct: 91 GTPSA--KQSKQGKITADRLRIRKAPDQSAAIVGTLEKNAVVTVTRAEGGWVYIESGNVS 148
Query: 177 GWIKKQKI 184
GW Q +
Sbjct: 149 GWADSQYV 156
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P + V T +T G +E+ W ++ DGT GW+ ++ +
Sbjct: 177 VAATSLNIRRSPSLQSGTVAT-VTYGTRLEITGTDHGWYEVELEDGTHGWVAGFYVT-RE 234
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
S + NLYK+P S V + G I W T +
Sbjct: 235 SQAKRSSEAEVTLHSGTNLYKRPQSGSDTVGTAKAGDRFPIVSEMDGWYKIRLESGTSAY 294
Query: 179 IKKQK 183
I +
Sbjct: 295 ISAKA 299
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 42/127 (33%), Gaps = 8/127 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---S 116
I A R R P +V T L K V V + W I GW + +
Sbjct: 103 ITADRLRIRKAPDQSAAIVGT-LEKNAVVTVTRAEGGWVYIE-SGNVSGWADSQYVQTEK 160
Query: 117 GKRSAIVSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
K + + N +N+ + P +QS VA V G L I W
Sbjct: 161 NKNAGKTAENNVSAAIVAATSLNIRRSPSLQSGTVATVTYGTRLEITGTDHGWYEVELED 220
Query: 174 DTEGWIK 180
T GW+
Sbjct: 221 GTHGWVA 227
>gi|254852145|ref|ZP_05241493.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
gi|258605448|gb|EEW18056.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
Length = 436
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|46907749|ref|YP_014138.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes serotype
4b str. F2365]
gi|47094424|ref|ZP_00232110.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|226224122|ref|YP_002758229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
Clip81459]
gi|254824420|ref|ZP_05229421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|254931456|ref|ZP_05264815.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|255521239|ref|ZP_05388476.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-175]
gi|300764812|ref|ZP_07074802.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|46881018|gb|AAT04315.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47017199|gb|EAL08046.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|225876584|emb|CAS05293.1| Putative N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293583008|gb|EFF95040.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|293593655|gb|EFG01416.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|300514488|gb|EFK41545.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|328465558|gb|EGF36787.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 1816]
gi|328474883|gb|EGF45683.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 220]
gi|332311963|gb|EGJ25058.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes str.
Scott A]
Length = 427
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|112961525|gb|ABI28423.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
>gi|254829720|ref|ZP_05234375.1| hypothetical protein Lmon1_00125 [Listeria monocytogenes 10403S]
Length = 427
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G LT+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G + V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQLTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|255025793|ref|ZP_05297779.1| hypothetical protein LmonocytFSL_04645 [Listeria monocytogenes FSL
J2-003]
Length = 436
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|224499818|ref|ZP_03668167.1| hypothetical protein LmonF1_09084 [Listeria monocytogenes Finland
1988]
Length = 427
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|16803561|ref|NP_465046.1| hypothetical protein lmo1521 [Listeria monocytogenes EGD-e]
gi|47097018|ref|ZP_00234591.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|224501539|ref|ZP_03669846.1| hypothetical protein LmonFR_03312 [Listeria monocytogenes FSL
R2-561]
gi|254828245|ref|ZP_05232932.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|254898313|ref|ZP_05258237.1| hypothetical protein LmonJ_00820 [Listeria monocytogenes J0161]
gi|254912195|ref|ZP_05262207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
gi|254936523|ref|ZP_05268220.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284801911|ref|YP_003413776.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284995053|ref|YP_003416821.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|16410950|emb|CAC99599.1| lmo1521 [Listeria monocytogenes EGD-e]
gi|47014600|gb|EAL05560.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|258600633|gb|EEW13958.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|258609117|gb|EEW21725.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284057473|gb|ADB68414.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284060520|gb|ADB71459.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|293590168|gb|EFF98502.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
Length = 427
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|112961393|gb|ABI28335.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + E V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANENS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|38603523|dbj|BAD02898.1| bacteriolytic enzyme [Bacillus clausii]
Length = 1333
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 784 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 841
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 842 GTVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKVGNRTGW 901
Query: 179 IKKQKI 184
+ +
Sbjct: 902 VSADYL 907
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 642 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 699
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 700 GNVDNTPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 759
Query: 179 IKKQKI 184
+ +
Sbjct: 760 VSVDYL 765
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 500 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 557
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 558 GNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 617
Query: 179 IKKQKI 184
+ +
Sbjct: 618 VSVDYL 623
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L+ G
Sbjct: 713 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVNGS 770
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P N +NL I+ + G + + + G W + GW
Sbjct: 771 GNVDNTPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 830
Query: 179 IKKQKI 184
+ +
Sbjct: 831 VSVDYL 836
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GK 118
+R N R G G ++++ T LTKG VE++K+ W Q++ GW++ L+ G
Sbjct: 429 TTARLNLRSGAGTNHSIITT-LTKGQKVELLKKQGGWYQVK-AGNRTGWVSADYLNVNGS 486
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 487 GNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 546
Query: 179 IKKQKI 184
+ +
Sbjct: 547 VSVDYL 552
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L+ G
Sbjct: 571 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVNGS 628
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 629 GNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 688
Query: 179 IKKQKI 184
+ +
Sbjct: 689 VSVDYL 694
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---- 116
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L+
Sbjct: 855 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-VGNRTGWVSADYLNVSNN 912
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K ++ + +R T +NL P+ S I+ + G L I + G W +
Sbjct: 913 QAKTESVETVIDRGTTTA-RLNLRVDPNTSSKIITTLNNGQQLDILKKQGSWYYVKVGSQ 971
Query: 176 EGWIKKQKI 184
GW+ Q +
Sbjct: 972 TGWVSSQYV 980
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+R N R P V+ T L G +E++K+ NW ++R GW++ + +
Sbjct: 358 TTARLNLRSQPNTSSNVLTT-LALGQKLEILKKEGNWYRVR-AGHQSGWVSADYVKISSN 415
Query: 121 AI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ SP +NL I+ + G + + + G W + GW
Sbjct: 416 GVDKESPSLGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGW 475
Query: 179 IKKQKI 184
+ +
Sbjct: 476 VSADYL 481
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
E+ P F T A R N R GPG +++V T L K VE++ + NW QI T G+
Sbjct: 273 EQLPTGTFGTTTA-RLNVRTGPGTSHSIVTT-LDKDTKVELLAKQGNWYQI-AVGNTTGF 329
Query: 110 INKSLLSGKRSAIVSPWNRKT------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
++ L + + + + +NL +P+ S ++ + G L I +
Sbjct: 330 VSGDYLKLDKPSEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILKK 389
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W GW+ +
Sbjct: 390 EGNWYRVRAGHQSGWVSADYV 410
>gi|290893880|ref|ZP_06556858.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
gi|290556597|gb|EFD90133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
Length = 427
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSSRSKTTKLSEATIVIDPG 258
>gi|217964332|ref|YP_002350010.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|217333602|gb|ACK39396.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|307571102|emb|CAR84281.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes L99]
gi|313608674|gb|EFR84513.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
F2-208]
Length = 427
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|91776536|ref|YP_546292.1| hypothetical protein Mfla_2184 [Methylobacillus flagellatus KT]
gi|91710523|gb|ABE50451.1| protein of unknown function DUF1058 [Methylobacillus flagellatus
KT]
Length = 141
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 22/160 (13%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA+ L P++A + E F +P+ V A A + L +G PV
Sbjct: 1 MLAVTMLLMPVMASAVE---FRSVAVPKAVVYDAPSAQGK---------KTFILGQGYPV 48
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ + +W ++RD G++ WI L+ KR+ +V ++ + D S +
Sbjct: 49 EIIVDLGDWLKVRDAQGSLNWIEAKQLANKRTVLVKGGQ--------ADIRQAADAASAL 100
Query: 149 VAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKIWG 186
+ K + V+L + E W + G+I +WG
Sbjct: 101 LGKADTDVVLDMLEPPVNGWIKVKHRDGITGYILASSLWG 140
>gi|297616461|ref|YP_003701620.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
gi|297144298|gb|ADI01055.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
Length = 634
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 25/179 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI L + ++ L ++ TI S N R GPG YT V +
Sbjct: 8 TARLISVLVLVTFVLSFLVVASAAWAATG-------TITGSVVNIRSGPGTNYTKVGA-I 59
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP----------------W 126
TKG VEV+K+ +W QIR GW++ SL+S K ++ P
Sbjct: 60 TKGAQVEVIKQAGDWCQIRFAGNKTGWVSSSLISVKATSQSQPVVSTTSSSTVSATGSGT 119
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKI 184
+NL + P +V KV G +LT+ + SG+W G+I +
Sbjct: 120 TTVEVTGTTVNLRQGPGTSYKVVGKVSKGTVLTVVDKSGDWYKITGQGIPVGYISSSLV 178
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 15/129 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y VV ++KG + VV + +W +I +G+I+ SL+ + + +
Sbjct: 130 NLRQGPGTSYKVVGK-VSKGTVLTVVDKSGDWYKITGQGIPVGYISSSLVKIRNNVATTG 188
Query: 126 WNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ +NL P V ++ G + + + S +W
Sbjct: 189 SSSTQGSVAQGTQNKAALVTGQVVNLRSGPGTSYSKVGQLVKGDTVQVLKSSSDWYLVKT 248
Query: 173 L-DTEGWIK 180
+GW+
Sbjct: 249 ESGAQGWVA 257
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 7/111 (6%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
S + + + + N R GPG Y+ V + KG V+V+K +
Sbjct: 184 VATTGSSSTQGSVAQGTQNKAALVTGQVVNLRSGPGTSYSKVGQLV-KGDTVQVLKSSSD 242
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
W ++ G GW+ L V N N P S
Sbjct: 243 WYLVKTESGAQGWVAGWL------VQVVTSGSTPNMNQNTNQTADPPSNSA 287
>gi|112961342|gb|ABI28301.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961345|gb|ABI28303.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961348|gb|ABI28305.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961351|gb|ABI28307.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961354|gb|ABI28309.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961357|gb|ABI28311.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961360|gb|ABI28313.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961363|gb|ABI28315.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961366|gb|ABI28317.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961369|gb|ABI28319.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961372|gb|ABI28321.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961375|gb|ABI28323.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961378|gb|ABI28325.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961381|gb|ABI28327.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961384|gb|ABI28329.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961387|gb|ABI28331.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961396|gb|ABI28337.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961399|gb|ABI28339.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961402|gb|ABI28341.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961405|gb|ABI28343.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961408|gb|ABI28345.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961411|gb|ABI28347.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961414|gb|ABI28349.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961417|gb|ABI28351.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961420|gb|ABI28353.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961423|gb|ABI28355.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961426|gb|ABI28357.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961429|gb|ABI28359.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961432|gb|ABI28361.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961435|gb|ABI28363.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961438|gb|ABI28365.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961441|gb|ABI28367.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961444|gb|ABI28369.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961447|gb|ABI28371.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961450|gb|ABI28373.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961453|gb|ABI28375.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961456|gb|ABI28377.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961459|gb|ABI28379.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961462|gb|ABI28381.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961465|gb|ABI28383.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961468|gb|ABI28385.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961471|gb|ABI28387.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961474|gb|ABI28389.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961477|gb|ABI28391.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961480|gb|ABI28393.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961483|gb|ABI28395.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961486|gb|ABI28397.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961489|gb|ABI28399.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961492|gb|ABI28401.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961495|gb|ABI28403.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961498|gb|ABI28405.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961501|gb|ABI28407.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961504|gb|ABI28409.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961507|gb|ABI28411.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961510|gb|ABI28413.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961513|gb|ABI28415.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961516|gb|ABI28417.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961519|gb|ABI28419.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961522|gb|ABI28421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961528|gb|ABI28425.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|328953858|ref|YP_004371192.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454182|gb|AEB10011.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 147
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R ++I R N R P +++ KG P+ V K+ +W D++G GW+ + L+
Sbjct: 22 RTMSIARDRVNVRTKPSKRASILFQ-APKGYPIVVKKKTRHWLYFEDWNGNKGWVYRPLV 80
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---YN 172
S + ++ N+ K P + ++A+ + G + + G+W Y
Sbjct: 81 SAIPTTVIRV--------DTANVRKGPGTRRPLIAQAKQGEIYRVLGEQGDWVKIGYYYE 132
Query: 173 LDTEGWIKKQKIWG 186
+ GWI +WG
Sbjct: 133 NEVVGWIYDDLVWG 146
>gi|112961390|gb|ABI28333.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLMIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|112959229|gb|ABI27123.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959232|gb|ABI27125.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959235|gb|ABI27127.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959238|gb|ABI27129.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959241|gb|ABI27131.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959244|gb|ABI27133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959247|gb|ABI27135.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959250|gb|ABI27137.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959253|gb|ABI27139.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959256|gb|ABI27141.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959259|gb|ABI27143.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959262|gb|ABI27145.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959265|gb|ABI27147.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959268|gb|ABI27149.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959271|gb|ABI27151.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959274|gb|ABI27153.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959277|gb|ABI27155.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959280|gb|ABI27157.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959283|gb|ABI27159.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959286|gb|ABI27161.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959289|gb|ABI27163.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959292|gb|ABI27165.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959295|gb|ABI27167.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959298|gb|ABI27169.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959301|gb|ABI27171.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959304|gb|ABI27173.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959307|gb|ABI27175.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959310|gb|ABI27177.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959313|gb|ABI27179.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959316|gb|ABI27181.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959349|gb|ABI27203.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959352|gb|ABI27205.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959355|gb|ABI27207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959358|gb|ABI27209.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959361|gb|ABI27211.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959364|gb|ABI27213.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959367|gb|ABI27215.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959370|gb|ABI27217.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959373|gb|ABI27219.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959376|gb|ABI27221.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959379|gb|ABI27223.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959382|gb|ABI27225.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959385|gb|ABI27227.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959388|gb|ABI27229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959391|gb|ABI27231.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959394|gb|ABI27233.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959397|gb|ABI27235.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959400|gb|ABI27237.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959403|gb|ABI27239.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959406|gb|ABI27241.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959409|gb|ABI27243.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959412|gb|ABI27245.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 355
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|112959319|gb|ABI27183.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959322|gb|ABI27185.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959325|gb|ABI27187.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959328|gb|ABI27189.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959331|gb|ABI27191.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959337|gb|ABI27195.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959340|gb|ABI27197.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959343|gb|ABI27199.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959346|gb|ABI27201.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 354
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|112959334|gb|ABI27193.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 352
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|315282433|ref|ZP_07870849.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
gi|313613922|gb|EFR87650.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
Length = 427
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSNSLGLLNKGDQVTVTSQQNGWAQIQYNGKSAWVSSDYL 157
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L KG V V + W QI+ ++G W++ L+ + S
Sbjct: 110 NVREKPSTSSNSLGL-LNKGDQVTVTSQQNGWAQIQ-YNGKSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGTVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P TV+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGTVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|289434801|ref|YP_003464673.1| hypothetical protein lse_1436 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171045|emb|CBH27587.1| unnamed protein product [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 427
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L ++ V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S N+ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + + W QI+ + G W++ L+ + SA
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQDGWAQIQ-YQGKNAWVSSDYLTIRESATKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ + ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDGEVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R V+ G + +W QIR G G++ ++
Sbjct: 174 VTIREDSTNIRNEASRDGEVI-EKANSGQSFAIQGVQGDWYQIRTTSGDTGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
+ KT + P
Sbjct: 233 SDKGQTATPKSKTTKLSEATIVIDPG 258
>gi|56964861|ref|YP_176592.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
gi|56911104|dbj|BAD65631.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
Length = 1398
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 794 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 851
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P N +NL I+ + G + + + G W + GW
Sbjct: 852 GNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 911
Query: 179 IKKQKI 184
+ +
Sbjct: 912 VSADYL 917
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 652 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 709
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P N +NL I+ + G + + + G W + GW
Sbjct: 710 GNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 769
Query: 179 IKKQKI 184
+ +
Sbjct: 770 VSVDYL 775
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 723 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 780
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P N +NL I+ + G + + + G W + GW
Sbjct: 781 GNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 840
Query: 179 IKKQKI 184
+ +
Sbjct: 841 VSVDYL 846
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L SG
Sbjct: 581 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSVDYLNVSGS 638
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 639 GNVDNTPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 698
Query: 179 IKKQKI 184
+ +
Sbjct: 699 VSVDYL 704
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GK 118
+R N R G G ++++ T LTKG VE++K+ W Q++ GW++ L+ G
Sbjct: 510 TTARLNLRSGAGTNHSIITT-LTKGQKVELLKKQGGWYQVK-AGNRTGWVSADYLNVNGS 567
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 568 GNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTGW 627
Query: 179 IKKQKI 184
+ +
Sbjct: 628 VSVDYL 633
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GK 118
+R N R G G ++++ T LTKG VE++K+ W Q++ GW++ L+ G
Sbjct: 439 TTARLNLRSGAGTNHSIITT-LTKGQKVELLKKQGGWYQVK-AGNRTGWVSADYLNVNGS 496
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +P + +NL I+ + G + + + G W + GW
Sbjct: 497 GNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGW 556
Query: 179 IKKQKI 184
+ +
Sbjct: 557 VSADYL 562
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---- 116
+R N R G G ++++ T L KG VE++K+ W Q++ GW++ L+
Sbjct: 865 TTARLNLRSGAGTNHSIITT-LAKGQKVELLKKQGGWYQVK-AGNRTGWVSADYLNVSNN 922
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K ++ + +R T +NL P+ S I+ + G L I + G W +
Sbjct: 923 QAKTESVETVIDRGTTTA-RLNLRVDPNTSSKIITTLNNGQQLDILKKQGSWYYVKVGSQ 981
Query: 176 EGWIKKQKI 184
GW+ Q +
Sbjct: 982 TGWVSSQYV 990
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 4/126 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+R N R P V+ T L G +E++K+ NW ++R GW++ + +
Sbjct: 368 TTARLNLRSQPNTSSNVLTT-LALGQKLEILKKEGNWYRVR-AGHQSGWVSADYVKISSN 425
Query: 121 AI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ SP +NL I+ + G + + + G W + GW
Sbjct: 426 GVDKESPSLGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGW 485
Query: 179 IKKQKI 184
+ +
Sbjct: 486 VSADYL 491
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 9/141 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
E+ P F T A R N R GPG +++V T L K VE++ + NW QI D T G+
Sbjct: 283 EQLPTGTFGTTTA-RLNVRTGPGTSHSIVTT-LDKDTKVELLAKQGNWYQI-AVDNTTGF 339
Query: 110 INKSLLSGKRSAIVSPWNRKT------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
++ L + + + + +NL +P+ S ++ + G L I +
Sbjct: 340 VSGDYLKLDKPSEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILKK 399
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W GW+ +
Sbjct: 400 EGNWYRVRAGHQSGWVSADYV 420
>gi|313633168|gb|EFS00052.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL N1-067]
Length = 427
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L ++ V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S N+ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + + W QI+ + G W++ L+ + SA
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQDGWAQIQ-YQGKNAWVSSDYLTIRESATKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ + ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDGAVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R V+ G + +W QIR G G++ ++
Sbjct: 174 VTIREDSTNIRNEASRDGAVI-EKANSGQSFAIQGVQGDWYQIRTTSGDTGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
+ KT + P
Sbjct: 233 SDKGQTATPKSKTTKLSEATIVIDPG 258
>gi|315303279|ref|ZP_07873917.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
gi|313628352|gb|EFR96847.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
Length = 427
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L ++ V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ K + VV E W +++ +G GW+ L+ + S + +N+ +K
Sbjct: 55 VRKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVTSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSNSLGLLNNGDQVTVTSQQDGWAQIQYQGKSAWVSSDYL 157
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV-- 123
N R P + L G V V + + W QI+ + G W++ L + S
Sbjct: 110 NVREKPSTSSNSLGL-LNNGDQVTVTSQQDGWAQIQ-YQGKSAWVSSDYLDIRESVTKVD 167
Query: 124 -SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ S ++ K G I+ G+W T G++
Sbjct: 168 DSDLQTVTIREDSTNIRSDASRDSEVIEKANSGQSFAIQGVQGDWYQIRTTNGTNGYVA 226
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VTI+ N R V+ G + +W QIR +GT G++ ++
Sbjct: 174 VTIREDSTNIRSDASRDSEVI-EKANSGQSFAIQGVQGDWYQIRTTNGTNGYVANWVVD 231
>gi|223698233|gb|ACN18729.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698272|gb|ACN18755.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698275|gb|ACN18757.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698284|gb|ACN18763.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698290|gb|ACN18767.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698308|gb|ACN18779.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698446|gb|ACN18871.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G LT+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G + V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQLTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|223698266|gb|ACN18751.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698269|gb|ACN18753.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698293|gb|ACN18769.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698296|gb|ACN18771.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698341|gb|ACN18801.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698377|gb|ACN18825.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698380|gb|ACN18827.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698419|gb|ACN18853.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698449|gb|ACN18873.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698452|gb|ACN18875.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698455|gb|ACN18877.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698485|gb|ACN18897.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698518|gb|ACN18919.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698548|gb|ACN18939.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698551|gb|ACN18941.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698554|gb|ACN18943.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698557|gb|ACN18945.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698560|gb|ACN18947.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698563|gb|ACN18949.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698566|gb|ACN18951.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|223698245|gb|ACN18737.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTITIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+TI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 ITIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|313637737|gb|EFS03098.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL S4-171]
Length = 352
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L ++ V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S N+ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + + W QI+ + G W++ L+ + SA
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQDGWAQIQ-YQGKNAWVSSDYLTIRESATKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ + S ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDSAVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R V+ G + +W QIR G G++ ++
Sbjct: 174 VTIREDSTNIRNEASRDSAVI-EKANSGQSFAIQGVQGDWYQIRTTSGDTGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
+ KT + P
Sbjct: 233 SDKGQTATPKSKTTKLSEATIVIDPG 258
>gi|223698230|gb|ACN18727.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698236|gb|ACN18731.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698239|gb|ACN18733.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698242|gb|ACN18735.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698248|gb|ACN18739.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698251|gb|ACN18741.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698254|gb|ACN18743.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698257|gb|ACN18745.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698260|gb|ACN18747.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698263|gb|ACN18749.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698278|gb|ACN18759.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698281|gb|ACN18761.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698287|gb|ACN18765.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698299|gb|ACN18773.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698302|gb|ACN18775.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698311|gb|ACN18781.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698314|gb|ACN18783.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698317|gb|ACN18785.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698320|gb|ACN18787.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698323|gb|ACN18789.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698326|gb|ACN18791.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698329|gb|ACN18793.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698332|gb|ACN18795.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698335|gb|ACN18797.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698338|gb|ACN18799.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698344|gb|ACN18803.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698347|gb|ACN18805.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698350|gb|ACN18807.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698353|gb|ACN18809.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698356|gb|ACN18811.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698359|gb|ACN18813.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698362|gb|ACN18815.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698365|gb|ACN18817.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698368|gb|ACN18819.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698371|gb|ACN18821.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698374|gb|ACN18823.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698383|gb|ACN18829.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698386|gb|ACN18831.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698389|gb|ACN18833.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698392|gb|ACN18835.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698395|gb|ACN18837.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698398|gb|ACN18839.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698401|gb|ACN18841.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698404|gb|ACN18843.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698407|gb|ACN18845.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698410|gb|ACN18847.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698413|gb|ACN18849.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698416|gb|ACN18851.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698422|gb|ACN18855.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698425|gb|ACN18857.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698428|gb|ACN18859.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698431|gb|ACN18861.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698434|gb|ACN18863.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698437|gb|ACN18865.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698440|gb|ACN18867.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698443|gb|ACN18869.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698458|gb|ACN18879.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698461|gb|ACN18881.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698464|gb|ACN18883.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698467|gb|ACN18885.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698470|gb|ACN18887.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698473|gb|ACN18889.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698476|gb|ACN18891.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698479|gb|ACN18893.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698482|gb|ACN18895.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698488|gb|ACN18899.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698491|gb|ACN18901.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698494|gb|ACN18903.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698497|gb|ACN18905.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698500|gb|ACN18907.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698503|gb|ACN18909.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698506|gb|ACN18911.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698509|gb|ACN18913.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698512|gb|ACN18915.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698515|gb|ACN18917.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698521|gb|ACN18921.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698524|gb|ACN18923.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698527|gb|ACN18925.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698530|gb|ACN18927.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698533|gb|ACN18929.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698536|gb|ACN18931.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698539|gb|ACN18933.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698542|gb|ACN18935.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698545|gb|ACN18937.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698569|gb|ACN18953.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698572|gb|ACN18955.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698575|gb|ACN18957.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698578|gb|ACN18959.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698581|gb|ACN18961.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698584|gb|ACN18963.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698587|gb|ACN18965.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698590|gb|ACN18967.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698593|gb|ACN18969.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698596|gb|ACN18971.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698599|gb|ACN18973.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698602|gb|ACN18975.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698605|gb|ACN18977.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|223698305|gb|ACN18777.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT ++ P
Sbjct: 233 SDKGQTSSPRSKTTKLSEASIVIDPG 258
>gi|16800624|ref|NP_470892.1| hypothetical protein lin1556 [Listeria innocua Clip11262]
gi|16414043|emb|CAC96787.1| lin1556 [Listeria innocua Clip11262]
Length = 427
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ Q +
Sbjct: 115 PSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P T + L G V V + W QI+ ++G W++ L+ + S
Sbjct: 110 NVREKPSTSSTSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGKSAWVSSQYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R PG V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPGRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|311069243|ref|YP_003974166.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
atrophaeus 1942]
gi|310869760|gb|ADP33235.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
atrophaeus 1942]
Length = 519
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 16/165 (9%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
IL + A++ P+ A E I N R GPG+ Y +
Sbjct: 5 CTILILCFVIIAALFSPPRPVTAAQGE------------AVIATDEMNVRSGPGLSYGIT 52
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIY 135
+ KG ++KE +W QI+ G GW+ L+ +G+ S + T+
Sbjct: 53 -AEVKKGESYPILKEDGDWVQIQLSSGEKGWVVSWLIKKKTGESSRASAGSETVTSTDSD 111
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + K P ++ K G I + W GW+
Sbjct: 112 LRIRKGPGTSYEVIGKFPQGEQAKIIDKDNSWIKISYQGVTGWVA 156
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT S R GPG Y V+ + +G +++ + +W +I + G GW+ S
Sbjct: 105 VTSTDSDLRIRKGPGTSYEVIGKF-PQGEQAKIIDKDNSWIKIS-YQGVTGWVASVYTSK 162
Query: 118 KRS-------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
A S T +N+ S I+ K+ G L+I W
Sbjct: 163 SGGGSQESGQASTSQNKSGTVGVSSLNVRSSASHDSAIITKLTRGTKLSILTEENGWLKI 222
Query: 171 YNLDTEGWIKKQKI 184
GW+ I
Sbjct: 223 EANGQRGWVASHYI 236
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R ++ T LT+G + ++ E W +I +G GW+ +
Sbjct: 182 TVGVSSLNVRSSASHDSAII-TKLTRGTKLSILTEENGWLKIE-ANGQRGWVASHYIVTG 239
Query: 119 RSAIVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ S ++ NL + IV + E G TI G W
Sbjct: 240 SNQSTSSSGGSGSSSSSSAKKAYIVYGGTNLRSSASTSASIVERAEKGSSYTITGTKGSW 299
Query: 168 CFGY-NLDTEGWIK 180
++
Sbjct: 300 YEVTLENGQTAYVA 313
>gi|254994484|ref|ZP_05276674.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-064]
Length = 288
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ ++GT W++ L+ + S
Sbjct: 110 NVREKPSTSSKALGL-LNNGDQVTVTSQQNGWAQIQ-YNGTSAWVSSDYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPSRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|116495019|ref|YP_806753.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227534971|ref|ZP_03965020.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|116105169|gb|ABJ70311.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227187428|gb|EEI67495.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 440
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ +A+ F + +++T+KA N R+GPG+ Y+++ + G
Sbjct: 12 LVVLVALLFGVGVATTSVMANT--------QYMTVKADTVNVRLGPGLAYSIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A N P +N+ +
Sbjct: 63 NELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP--VNVREYASQN 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G W T WI +
Sbjct: 121 AKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A S K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-----------VNVREYASQN 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ + L G V+VV + W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGS-LNAGDSVKVVYQEGAWTQI-AYNTTAAWITSSSVQLTGQTTNLAQPAQTALAN 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 EKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQDDWYAVTAPDGKTGYVA 238
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
LA + + +K P + N R GI V L KG + V K+ ++W
Sbjct: 168 LAQPAQTALANEKSAPALKVTTNTMTNLRNAAGINAPSV-EKLDKGTELTVSKQQDDWYA 226
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ DG G++ +S K + +
Sbjct: 227 VTAPDGKTGYVASWTVSAPNDGQTQKAATKLSEATIV 263
>gi|301066578|ref|YP_003788601.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
gi|300438985|gb|ADK18751.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
Length = 440
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ +A+ F + +++T+KA N R+GPG+ Y+++ + G
Sbjct: 12 LVVLVALLFGVGVATTSVMANT--------QYMTVKADTVNVRLGPGLAYSIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A N P +N+ +
Sbjct: 63 NELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP--VNVREYASQN 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G W T WI +
Sbjct: 121 AKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A S K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-----------VNVREYASQN 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ + L G V+VV + W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGS-LNAGDSVKVVYQEGAWTQI-AYNTTAAWITSSSVQLTGQTTNLAQPAQTALAT 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 EKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQDDWYAVTAPDGKTGYVA 238
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
LA + + +K P + N R GI V L KG + V K+ ++W
Sbjct: 168 LAQPAQTALATEKSAPALKVTTNTMTNLRNAAGINAPSV-EKLDKGTELTVSKQQDDWYA 226
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ DG G++ +S K + +
Sbjct: 227 VTAPDGKTGYVASWTVSAPNDGQTQKAATKLSEATIV 263
>gi|239631390|ref|ZP_04674421.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239525855|gb|EEQ64856.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 440
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ +A+ F + +++T+KA N R+GPG+ Y+++ + G
Sbjct: 12 LVVLVALLFGVGVATTSVMANT--------QYMTVKADTVNVRLGPGLAYSIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A N P +N+ +
Sbjct: 63 NELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP--VNVREYASQN 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G W T WI +
Sbjct: 121 AKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A S K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-----------VNVREYASQN 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ + L G V+VV + W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGS-LNAGDSVKVVYQEGAWTQI-AYNTTAAWITSSSVQLTGQTTNLAQPAQTALAI 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 EKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQDDWYAVTAPDGKTGYVA 238
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GI V L KG + V K+ ++W + DG G++ +S
Sbjct: 194 NLRNAAGINAPSV-EKLDKGTELTVSKQQDDWYAVTAPDGKTGYVASWTVSAPNDGQTQK 252
Query: 126 WNRKTNNPIYI 136
K + +
Sbjct: 253 AATKLSEATIV 263
>gi|191638524|ref|YP_001987690.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|190712826|emb|CAQ66832.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|327382560|gb|AEA54036.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei LC2W]
gi|327385757|gb|AEA57231.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei BD-II]
Length = 440
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ +A+ F + +++T+KA N R+GPG+ Y+++ + G
Sbjct: 12 LVVLVALLFGVGVATTSVMANT--------QYMTVKADTVNVRLGPGLAYSIMGQ-VKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ +W Q+R IGW+ L+ +A N P +N+ +
Sbjct: 63 NELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP--VNVREYASQN 120
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + G + + G W T WI +
Sbjct: 121 AKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A S K +P N R
Sbjct: 72 NSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-----------VNVREYASQN 120
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ + L G V+VV + W QI ++ T WI S L+G+ + + P
Sbjct: 121 AKQLGS-LNAGDSVKVVYQEGAWTQI-AYNTTAAWITSSSVQLTGQTTNLAQPAQTALAT 178
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 179 EKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQDDWYAVTAPDGKTGYVA 238
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
LA + + +K P + N R GI V L KG + V K+ ++W
Sbjct: 168 LAQPAQTALATEKSAPALKVTTNTMTNLRNAAGINAPSV-EKLDKGTELTVSKQQDDWYA 226
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ DG G++ +S K + +
Sbjct: 227 VTAPDGKTGYVASWTVSAPNDGQTQKAATKLSEATIV 263
>gi|116872950|ref|YP_849731.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741828|emb|CAK20952.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 427
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L ++ V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANANS-----VIVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENEWYKVQLDNGNTGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ +
Sbjct: 115 PSTSSASLGLLNNGDQVTVTSQQNGWAQIQYKGKSAWVSSDFL 157
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P + L G V V + W QI+ + G W++ L+ + S
Sbjct: 110 NVREKPSTSSASLGL-LNNGDQVTVTSQQNGWAQIQ-YKGKSAWVSSDFLNIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIREDSTNIRNKPSRDGDVIEKANSGQGFAIQGVQGDWYKIRTTSGQEGYVA 226
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R P V+ G + +W +IR G G++ ++
Sbjct: 174 VTIREDSTNIRNKPSRDGDVI-EKANSGQGFAIQGVQGDWYKIRTTSGQEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|313623671|gb|EFR93825.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL J1-023]
Length = 427
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VIVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ Q +
Sbjct: 115 PSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P T + L G V V + W QI+ ++G W++ L+ + SA
Sbjct: 110 NVREKPSTSSTSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGKSAWVSSQYLTIRESATKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R PG V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPGRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|299822821|ref|ZP_07054707.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
gi|299816350|gb|EFI83588.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
Length = 426
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 11/165 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L +++ L I + +A++H V ++ N R GPG+ Y V
Sbjct: 4 KFLFITIVSFLLIVAGIMTTIAMAHANT----------VEVQTEVLNVRNGPGLAYDVTS 53
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L ++V+ E W ++R +G G++ L+ K + S + +N+
Sbjct: 54 QVRKHDL-LQVIGEENKWYKVRLSNGESGYVASWLVKNKDVSAASNSLATVTSDGGLNIR 112
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W WI I
Sbjct: 113 TSPSTSSESIGLLHKGDQVTVISQQNGWAQVQYKGKIAWINSSYI 157
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 58 VTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
T+ + N R P + L KG V V+ + W Q++ + G I WIN S ++
Sbjct: 101 ATVTSDGGLNIRTSPSTSSESIGL-LHKGDQVTVISQQNGWAQVQ-YKGKIAWINSSYIT 158
Query: 117 GKRSAIV---SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
K SA S + T N+ + + S I+ KV+ G I G+W
Sbjct: 159 IKESATREKDSSLQQVTVRENATNIRETAALNSNILEKVDAGESFDIEGVQGDWYKVKTT 218
Query: 173 LDTEGWIK 180
G+I
Sbjct: 219 NGQSGYIA 226
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
VT++ + N R + ++ + G ++ +W +++ +G G+I ++
Sbjct: 174 VTVRENATNIRETAALNSNIL-EKVDAGESFDIEGVQGDWYKVKTTNGQSGYIANWVVDI 232
Query: 116 SGKRSAIVSPWNRKTNNPIYI 136
S K A P K + + +
Sbjct: 233 SQKGDAAPKPKTTKLSEAVIV 253
>gi|255030802|ref|ZP_05302753.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes LO28]
Length = 202
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W T W+ +
Sbjct: 115 PSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
>gi|296331697|ref|ZP_06874166.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675344|ref|YP_003867016.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151292|gb|EFG92172.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413588|gb|ADM38707.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 517
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L S+IF A++ L+ + A E I N R GPG+ Y +
Sbjct: 7 VLIVSIIFAGALFPPLSSVTAAQGE------------AVIATDEMNVRSGPGLSYGIT-A 53
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR---SAIVSPWNRKTNNPIYIN 137
KG ++KE +W QI+ G GW+ L++ + ++ + T+ +
Sbjct: 54 EAKKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQAGTSSSESSDTVTSTDPDLR 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W + GW+ + +
Sbjct: 114 MRTGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYQNATGWVSSEYV 160
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ L ++ VT R GPG Y V+ + +G V+ +
Sbjct: 83 VVSWLITKEDQAGTSSSESSDTVTSTDPDLRMRTGPGTSYEVIGKF-PQGSQASVIDKDS 141
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIV---------SPWNRKTNNPIYINLYKKPDIQS 146
W +I + GW++ ++ RS+ S + T +N+ +
Sbjct: 142 GWIKIS-YQNATGWVSSEYVTSGRSSSASSKSAQTESSGASTGTVGVSSLNVRASASHDA 200
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ K++ G+ LT+ W +GW+ +
Sbjct: 201 AIITKLDRGMKLTVLNEKNGWAHIEVNGLKGWVASHYL 238
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 11/131 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
T+ S N R ++ T L +G+ + V+ E W I +G GW+ L
Sbjct: 184 TVGVSSLNVRASASHDAAII-TKLDRGMKLTVLNEKNGWAHIE-VNGLKGWVASHYLLTS 241
Query: 116 -----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S + SP + N+ + IV + G TI G W
Sbjct: 242 SDPAESSANAGSSSPAKKAYIVYGGTNVRSDASTSASIVERAAKGDSFTITGSKGSWYEI 301
Query: 171 YNL-DTEGWIK 180
G++
Sbjct: 302 KLDNGQTGYVA 312
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++V KG + +W +I+ +G G++ ++ +SA +
Sbjct: 268 NVRSDASTSASIV-ERAAKGDSFTITGSKGSWYEIKLDNGQTGYVANWVVQTSKSAEEAG 326
Query: 126 WNRKTNNP 133
+ +++P
Sbjct: 327 ESPVSDSP 334
>gi|313618811|gb|EFR90702.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL S4-378]
Length = 332
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N IF + L + V +KA N R GPG+ Y V
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANANS-----VVVKAEVLNVRSGPGLAYDVTSQ- 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K + VV E W +++ +G GW+ L+ + S ++ +N+ +K
Sbjct: 55 ARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGLNVREK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S + + G +T+ W W+ Q +
Sbjct: 115 PSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R P T + L G V V + W QI+ ++G W++ L+ + S
Sbjct: 110 NVREKPSTSSTSLGL-LNNGDQVTVTSQQNGWAQIQ-YNGKSAWVSSQYLTIRESVTKVD 167
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI+ N R PG V+ G + +W +IR G G++ ++
Sbjct: 174 VTIRDDSTNIRNKPGRDGAVI-EKANSGQGFAIQGVQGDWYKIRTTSGEEGYVANWVVDV 232
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD 143
S KT + P
Sbjct: 233 SDKGQTSSPRSKTTKLSEATIVIDPG 258
>gi|254469002|ref|ZP_05082408.1| conserved hypothetical protein [beta proteobacterium KB13]
gi|207087812|gb|EDZ65095.1| conserved hypothetical protein [beta proteobacterium KB13]
Length = 150
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F+++ A +A P T +TKG P+EV+ + W++++D +G I WI S LS
Sbjct: 24 FMSVNADQAFLHEAPS-GSTKKSFIVTKGYPLEVIVSLKEWKKVKDHEGLINWIKTSDLS 82
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGY--N 172
KR+ + + +Y +P S I+AKV V L + + +W Y
Sbjct: 83 SKRTVLNLKGDN--------PIYLEPSSASPILAKVNENVTLELLDAKKIDDWVKVYSKV 134
Query: 173 LDTEGWIKKQKIWGI 187
D EG+IK +WGI
Sbjct: 135 GDIEGFIKATDLWGI 149
>gi|320353987|ref|YP_004195326.1| hypothetical protein Despr_1887 [Desulfobulbus propionicus DSM
2032]
gi|320122489|gb|ADW18035.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+I + N R P + ++ T G P+++ +E NW D+ GW+ K L+S
Sbjct: 31 SIAKDQVNIRSKPSLSSEIIFT-APLGYPIKIEQEANNWSFFHDWQNNRGWVYKPLVSDI 89
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---YNLDT 175
+A+V N+ + +S +V+ E G + I G+W +
Sbjct: 90 ETAVVVV--------DKANIRNASNTRSQVVSTAEQGEIYKILAKKGDWVRLGYYHGGAE 141
Query: 176 EGWIKKQKIWG 186
GWI ++G
Sbjct: 142 VGWIHSDLVFG 152
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
A+ SP K+ +N+ KP + S I+ G + I + + W F ++ + GW+
Sbjct: 22 ALSSPAGAKSIAKDQVNIRSKPSLSSEIIFTAPLGYPIKIEQEANNWSFFHDWQNNRGWV 81
Query: 180 KKQKI 184
K +
Sbjct: 82 YKPLV 86
>gi|163791446|ref|ZP_02185855.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
gi|159873310|gb|EDP67405.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
Length = 439
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 9/170 (5%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
K + K + + + F A + + AS N R GPG+
Sbjct: 3 NKLILKKQKKFVTLFIIALFIGLTAFATVVLANQGT-------IKVDASVVNVRTGPGLS 55
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + T +T G V ++ E W ++R + IGWI L+ +
Sbjct: 56 YDI-MTQVTGGEKVTMLTEENEWYKVRLSNDQIGWIASWLIENTE-VSAATNKIGVVTGE 113
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + S I+ KV G LT+ W WI + I
Sbjct: 114 EVNIRSESNADSDILGKVTKGTELTVLFQQEGWTQVQYYGQVAWISSELI 163
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 69/191 (36%), Gaps = 25/191 (13%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
T EK+ + ++ L N I +A + ++ + K +
Sbjct: 63 TGGEKVTMLTEENEWYKVRLSNDQIGWIASWLIENTEVSAATNKIGV----------VTG 112
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGK 118
N R ++ +TKG + V+ + E W Q++ + G + WI+ L+ S
Sbjct: 113 EEVNIRSESNADSDILGK-VTKGTELTVLFQQEGWTQVQ-YYGQVAWISSELIKMTESAT 170
Query: 119 RSAIVSPWNRKTNNPIYI--------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ V+ + + PI N+ P I+S +V E G T G+W
Sbjct: 171 ETTTVAVAEEEDSAPIQTVTTRSSGTNIRNSPSIESGVVTTAEKGESFTYLSTEGDWYQV 230
Query: 171 YN-LDTEGWIK 180
+G++
Sbjct: 231 KLPDGQKGYVA 241
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--L 115
VT ++S N R P I VV T KG + +W Q++ DG G++ + L
Sbjct: 189 VTTRSSGTNIRNSPSIESGVVTT-AEKGESFTYLSTEGDWYQVKLPDGQKGYVANWVVDL 247
Query: 116 SGKRSAIVSPWNRKTNNPIYI--NLYKKPDIQSIIVAKVEPGVLLTIRE 162
S ++ + + + D ++ E V L +
Sbjct: 248 SADQTPAPTASVTSLAEATIVIDAGHGGNDPGALANTFYEKEVTLDTAK 296
>gi|299535677|ref|ZP_07048998.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
gi|298728877|gb|EFI69431.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
Length = 528
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + + + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLMVTMAIPNKNFVQRASADTSDLKV------AGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T L +G P+ + +W Q++ GW+ L + +A + + +N+
Sbjct: 58 T-LEEGDPLTSIGREGDWYQVK-AGNYEGWVASWLTAPT-NAKQAIDKTVISQVDRLNIR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 115 TEPDISSAVLGQLSTGNQANLVEENEEWAKIDWNGLTGWVSKDYV 159
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+A K+ + + V + R N R P I V+ L+ G +V+E E W
Sbjct: 85 WVASWLTAPTNAKQAIDKTVISQVDRLNIRTEPDISSAVLGQ-LSTGNQANLVEENEEWA 143
Query: 99 QIRDFDGTIGWINKSLLS-----------GKRSAIVSPWNRKTNNPIY--------INLY 139
+I D++G GW++K ++ + + V+ N +N+
Sbjct: 144 KI-DWNGLTGWVSKDYVTINDNPKKETEPKENAVEVTTTTTAPANKDTTFTILVDTLNVR 202
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
KKPD+ + + V G + W D + GW+
Sbjct: 203 KKPDLNAKKIGTVTKGQAFKVLAHEHNWVQIQYNDKKVGWVY 244
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 8/123 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T +TKG +V+ NW QI+ D +GW+ +
Sbjct: 193 TILVDTLNVRKKPDLNAKKIGT-VTKGQAFKVLAHEHNWVQIQYNDKKVGWVYSFYGTFS 251
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + NL + +V +V+ GV I ++
Sbjct: 252 NKVKSTSKTSTSKELESVTIIYNGTNLRTDASTAAEVVERVDAGVNYPIVGVKNDFYEIQ 311
Query: 172 NLD 174
D
Sbjct: 312 LDD 314
>gi|291485167|dbj|BAI86242.1| hypothetical protein BSNT_04002 [Bacillus subtilis subsp. natto
BEST195]
Length = 561
Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +IFT A++ + + A E I N R GPG+ Y +
Sbjct: 50 VLIVCIIFTAALFPTFSSVTAAQGE------------AVIATDETNVRSGPGLSYGIT-A 96
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---IN 137
+ KG ++KE +W QI+ G GW+ L++ + A S +
Sbjct: 97 EVKKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 156
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 157 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 203
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS- 124
R GPG Y V+ + +G V+ + W +I + GW++ ++ S+ S
Sbjct: 156 RMRSGPGTSYEVIGKF-PQGSQASVIDKDSGWIKIS-YHSATGWVSSEYVTSGGSSSASD 213
Query: 125 ---------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
T +N+ + I+ K++ G LT+ W
Sbjct: 214 ESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNGL 273
Query: 176 EGWIKKQKI 184
+GW+ +
Sbjct: 274 KGWVASHYL 282
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L +G + V+ E W I +G GW+ + L S
Sbjct: 228 TVGVSSLNVRASASHDAAII-TKLDRGTKLTVLNEKNGWAHIE-VNGLKGWVASHYLLTS 285
Query: 117 GKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + NL + IV + G TI G W
Sbjct: 286 SVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKGSWYEI 345
Query: 171 YNLDTE 176
+ +
Sbjct: 346 KLDNGQ 351
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++V KG + +W +I+ +G ++ ++ +SA +
Sbjct: 312 NLRSDASTSASIV-ERAAKGDSYTITGSKGSWYEIKLDNGQTAYVANWVVQTSKSAEEAG 370
Query: 126 WNRKTNNP 133
+++P
Sbjct: 371 EPPVSDSP 378
>gi|319644796|ref|ZP_07999029.1| YrvJ1 protein [Bacillus sp. BT1B_CT2]
gi|317392605|gb|EFV73399.1| YrvJ1 protein [Bacillus sp. BT1B_CT2]
Length = 527
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 14/176 (7%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + +L S++ FY + A + E I N R GP
Sbjct: 1 MGINMKKRAVLILSMMLAAQAAFYTSSNTASAAIGEAV----------IATDEINVRSGP 50
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV---SPWNR 128
G+ + +V +++ +++E +W QI+ G GW+ L+ K S +
Sbjct: 51 GLSHEIVSV-VSRNESYPILEERGDWVQIQLNGGQKGWVVSWLIKKKSQVSSGSDSASGK 109
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T++ + + K P + G + + G+W + GW+ +
Sbjct: 110 VTSSEANLRIRKGPGTSYEVQGVFPEGEQADLLKTDGKWIKISYQNITGWVYSDYV 165
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 12/135 (8%)
Query: 60 IKASRANSRI--GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ +S AN RI GPG Y V + +G +++K W +I + GW+ ++
Sbjct: 110 VTSSEANLRIRKGPGTSYEVQGVF-PEGEQADLLKTDGKWIKIS-YQNITGWVYSDYVNQ 167
Query: 118 --------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S+ S T +N+ Q I+A ++ +TI W
Sbjct: 168 GSGAKQSQSSSSHASSSKSGTVGVSTLNVRSTASHQGRIIATLQRNASVTILNEQHGWYE 227
Query: 170 GYNLDTEGWIKKQKI 184
+GW I
Sbjct: 228 IEFNGQKGWAASHYI 242
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L + V ++ E W +I F+G GW + L
Sbjct: 188 TVGVSTLNVRSTASHQGRIIAT-LQRNASVTILNEQHGWYEIE-FNGQKGWAASHYILEG 245
Query: 117 GKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
K+++ S + + N+ P S IV + G I G+W
Sbjct: 246 NKQNSGTSETSSSSEAKRQATIVYEGTNVRSGPSTSSAIVKRTGKGESYPIVSTKGDWYE 305
Query: 170 GYNLDTE 176
+ +
Sbjct: 306 IKLSNGD 312
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R TI N R GP +V KG +V +W +I+ +G ++ ++
Sbjct: 263 RQATIVYEGTNVRSGPSTSSAIV-KRTGKGESYPIVSTKGDWYEIKLSNGDSAYVASWVV 321
>gi|297537766|ref|YP_003673535.1| hypothetical protein M301_0574 [Methylotenera sp. 301]
gi|297257113|gb|ADI28958.1| protein of unknown function DUF1058 [Methylotenera sp. 301]
Length = 156
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 24/174 (13%)
Query: 17 YMPKILQNSLIFTLAIYFY-LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ ++++S + + L P A + + F ++ S+A P
Sbjct: 1 MIFSMIKSSKHLLIVLSILALLPATASALD-----------FRSVAVSKAVLYDAPS-NA 48
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
L++ PVEV+ +W ++RD G + W+ LS KR+ +V+
Sbjct: 49 AKKVLLLSQNYPVEVIVNLGDWLKVRDAQGALNWVEAKQLSNKRTVMVT--------ASK 100
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYN-LDTEGWIKKQKIWG 186
+ + D S +VA VE V+L + + W + G+I WG
Sbjct: 101 AEIRQSADATSNLVATVEKDVVLEVVDAKLSNGWLKIKHRDGVAGYILISSTWG 154
>gi|328554379|gb|AEB24871.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens TA208]
gi|328912784|gb|AEB64380.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens LL3]
Length = 517
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 12/162 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI I L P + E I + N R GPG+ Y + + KG
Sbjct: 8 LILCGVIITALLPSFHTAVAAEGE--------AVIATDKINVRGGPGLSYEIK-AEVKKG 58
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWNRKTNNPIYINLYKKP 142
++KE +W Q++ G GW+ L+S + T+ + + K P
Sbjct: 59 ERYPILKEEGDWVQLQLSPGKTGWVVSWLISKTAGGADNASAKSGTVTSTDPDLRIRKGP 118
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ K G ++ + + W T GW+ + +
Sbjct: 119 GTSYEVIGKFPQGAHASMLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT R GPG Y V+ + +G ++ + W I + GT GW++ ++
Sbjct: 105 VTSTDPDLRIRKGPGTSYEVIGKF-PQGAHASMLDKNSGWVNIS-YQGTTGWVSSEYVTA 162
Query: 118 -------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K ++ S T +N+ S I+ K+ G ++I W
Sbjct: 163 DSGGSDTKANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSRGTKVSILSEDHGWLKI 222
Query: 171 YNLDTEGWIKKQKI 184
GW I
Sbjct: 223 EANGQRGWAASHYI 236
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 12/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R + T L++G V ++ E W +I +G GW +
Sbjct: 182 TVGVSSLNVRSAASHDSAI-MTKLSRGTKVSILSEDHGWLKIE-ANGQRGWAASHYIIKD 239
Query: 119 RSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S ++ NL + IV + + G I SG+W
Sbjct: 240 SDSSDSAAGSGDSSDTSKKAYIVYGGTNLRSSASTSASIVKRADKGAAYPIVGSSGKWYE 299
Query: 170 GY-NLDTEGWIK 180
++
Sbjct: 300 VRLENGQTAYVA 311
>gi|221310696|ref|ZP_03592543.1| hypothetical protein Bsubs1_15076 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315020|ref|ZP_03596825.1| hypothetical protein BsubsN3_14987 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319941|ref|ZP_03601235.1| hypothetical protein BsubsJ_14898 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324222|ref|ZP_03605516.1| hypothetical protein BsubsS_15042 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 561
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +IFT A++ + + A E I N R GPG+ Y +
Sbjct: 50 VLIVCIIFTSALFPTFSSVTAAQGE------------AVIATDEMNVRSGPGLSYGIT-A 96
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---IN 137
+ KG ++KE +W QI+ G GW+ L++ + A S +
Sbjct: 97 EVKKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 156
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 157 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 203
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS- 124
R GPG Y V+ + +G V+ + W +I + GW++ ++ S+ S
Sbjct: 156 RMRSGPGTSYEVIGKF-PQGSQASVIDKDSGWIKIS-YHSATGWVSSEYVTSGGSSSASD 213
Query: 125 ---------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
T +N+ + I+ K++ G LT+ W
Sbjct: 214 ESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNGL 273
Query: 176 EGWIKKQKI 184
+GW+ +
Sbjct: 274 KGWVASHYL 282
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L +G + V+ E W I +G GW+ + L S
Sbjct: 228 TVGVSSLNVRASASHDAAII-TKLDRGTKLTVLNEKNGWAHIE-VNGLKGWVASHYLLTS 285
Query: 117 GKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + NL + IV + G TI G W
Sbjct: 286 SVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKGSWYEI 345
Query: 171 YNLDTE 176
+ +
Sbjct: 346 KLDNGQ 351
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++V KG + +W +I+ +G ++ ++ +SA +
Sbjct: 312 NLRSDASTSASIV-ERAAKGDSYTITGSKGSWYEIKLDNGQTAYVANWVVQTSKSAEEAG 370
Query: 126 WNRKTNNP 133
+++P
Sbjct: 371 EPPVSDSP 378
>gi|52786617|ref|YP_092446.1| YrvJ1 [Bacillus licheniformis ATCC 14580]
gi|163119572|ref|YP_080028.2| N-acetylmuramoyl-L-alanine amidase YrvJ [Bacillus licheniformis
ATCC 14580]
gi|52349119|gb|AAU41753.1| YrvJ1 [Bacillus licheniformis ATCC 14580]
gi|145903081|gb|AAU24390.2| N-acetylmuramoyl-L-alanine amidase YrvJ [Bacillus licheniformis
ATCC 14580]
Length = 523
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 14/169 (8%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+L S++ FY + A + E I N R GPG+ + +V
Sbjct: 4 RAVLILSMMLAAQAAFYTSSNTASAAIGEAV----------IATDEINVRSGPGLSHEIV 53
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV---SPWNRKTNNPIY 135
+++ +++E +W QI+ G GW+ L+ K S + T++
Sbjct: 54 SV-VSRNESYPILEERGDWVQIQLNGGQKGWVVSWLIKKKSQVSSGSDSASGKVTSSEAN 112
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + K P + G + + G+W + GW+ +
Sbjct: 113 LRIRKGPGTSYEVQGVFPEGEQADLLKTDGKWIKISYQNITGWVYSDYV 161
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 12/135 (8%)
Query: 60 IKASRANSRI--GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ +S AN RI GPG Y V + +G +++K W +I + GW+ ++
Sbjct: 106 VTSSEANLRIRKGPGTSYEVQGVF-PEGEQADLLKTDGKWIKIS-YQNITGWVYSDYVNQ 163
Query: 118 --------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S+ S T +N+ Q I+A ++ +TI W
Sbjct: 164 GSGAKQSQSSSSHASSSKSGTVGVSTLNVRSTASHQGRIIATLQRNASVTILNEQHGWYE 223
Query: 170 GYNLDTEGWIKKQKI 184
+GW I
Sbjct: 224 IEFNGQKGWAASHYI 238
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L + V ++ E W +I F+G GW + L
Sbjct: 184 TVGVSTLNVRSTASHQGRIIAT-LQRNASVTILNEQHGWYEIE-FNGQKGWAASHYILEG 241
Query: 117 GKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
K+++ S + + N+ P S IV + G I G+W
Sbjct: 242 NKQNSGTSETSSSSEAKRQATIVYEGTNVRSGPSTSSAIVKRTGKGESYPIVSTKGDWYE 301
Query: 170 GYNLDTE 176
+ +
Sbjct: 302 IKLSNGD 308
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R TI N R GP +V KG +V +W +I+ +G ++ ++
Sbjct: 259 RQATIVYEGTNVRSGPSTSSAIV-KRTGKGESYPIVSTKGDWYEIKLSNGDSAYVASWVV 317
>gi|154686899|ref|YP_001422060.1| YrvJ [Bacillus amyloliquefaciens FZB42]
gi|154352750|gb|ABS74829.1| YrvJ [Bacillus amyloliquefaciens FZB42]
Length = 520
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 12/163 (7%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+LI I L P + E I + N R GPG+ Y + + K
Sbjct: 7 ALILCGVIITALLPSFHTAIAAEGE--------AVIATDKINVRGGPGLSYGIK-AEVKK 57
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKK 141
G + KE +W Q++ G GW+ L+S + T+ + + K
Sbjct: 58 GERYPIAKEEGDWVQLQLSPGKTGWVVSWLISKTAGGADHSSATSGTVTSTDPDLRIRKG 117
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P ++ K+ G ++ + + W T GW+ + +
Sbjct: 118 PGTSYEVIGKLPQGAHASVLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 9/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ L VT R GPG Y V+ L +G V+ +
Sbjct: 83 VVSWLISKTAGGADHSSATSGTVTSTDPDLRIRKGPGTSYEVIGK-LPQGAHASVLDKNS 141
Query: 96 NWRQIRDFDGTIGWINKSLLSG-------KRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
W I + GT GW++ ++ K ++ S T +N+ S I
Sbjct: 142 GWVNIS-YQGTTGWVSSEYVTADSGGSDTKATSARSGSKNGTVGVSSLNVRSAASHDSAI 200
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+ G ++I W +GW I
Sbjct: 201 MTKLSRGTKVSILSEDHGWLKIEANGQKGWAASHYI 236
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 15/135 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R + T L++G V ++ E W +I +G GW +
Sbjct: 182 TVGVSSLNVRSAASHDSAI-MTKLSRGTKVSILSEDHGWLKIE-ANGQKGWAASHYIIKD 239
Query: 119 RSAIVSPWNRKTNNPIY------------INLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ S + NL + IV + + G I SG+
Sbjct: 240 SDSSDSASGSGDGSAGSGSSKKAYIVYGGTNLRSSASTSASIVKRADKGAAYPIVGSSGK 299
Query: 167 WCFGY-NLDTEGWIK 180
W ++
Sbjct: 300 WYEVRLENGQTAYVA 314
>gi|321312286|ref|YP_004204573.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis BSn5]
gi|320018560|gb|ADV93546.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis BSn5]
Length = 518
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +IFT A++ + + A E I N R GPG+ Y +
Sbjct: 7 VLIVCIIFTAALFPTSSSVTAAQGE------------AVIATDEMNVRSGPGLSYGIT-A 53
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---IN 137
+ KG ++KE +W QI+ G GW+ L++ + A S +
Sbjct: 54 EVKKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 114 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 160
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS- 124
R GPG Y V+ + +G V+ + W +I + GW++ ++ S+ S
Sbjct: 113 RMRSGPGTSYEVIGKF-PQGSQASVIDKDSGWIKIS-YHSATGWVSSEYVTSGGSSSASD 170
Query: 125 ---------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
T +N+ + I+ K++ G LT+ W
Sbjct: 171 ESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNGL 230
Query: 176 EGWIKKQKI 184
+GW+ +
Sbjct: 231 KGWVASHYL 239
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L +G + V+ E W I +G GW+ + L S
Sbjct: 185 TVGVSSLNVRASASHDAAII-TKLDRGTKLTVLNEKNGWAHIE-VNGLKGWVASHYLLTS 242
Query: 117 GKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + NL + IV + G TI G W
Sbjct: 243 SVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKGSWYEI 302
Query: 171 YNLDTE 176
+ +
Sbjct: 303 KLDNGQ 308
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++V KG + +W +I+ +G ++ ++ +SA +
Sbjct: 269 NLRSDASTSASIV-ERAAKGDSYTITGSKGSWYEIKLDNGQTAYVANWVVQTSKSAEEAG 327
Query: 126 WNRKTNNP 133
+++P
Sbjct: 328 EPPVSDSP 335
>gi|253995941|ref|YP_003048005.1| hypothetical protein Mmol_0568 [Methylotenera mobilis JLW8]
gi|253982620|gb|ACT47478.1| protein of unknown function DUF1058 [Methylotenera mobilis JLW8]
Length = 150
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A+ F L + + + F ++ +A P V L++ PVE
Sbjct: 7 IALIFMLMWVPLTASALD---------FRSVAVPKAILYDAPSTSSKKV-LLLSQSYPVE 56
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
VV W ++RD G++ W+ LS KRS +V+ + +PD+ + +V
Sbjct: 57 VVVNLGEWLKVRDAQGSMNWVEAKQLSTKRSVMVT--------KNLTEMRVRPDVAADLV 108
Query: 150 AKVEPGVLLTIRE--CSGEWCFGYN-LDTEGWIKKQKIWG 186
A +E V+L + E + W + G++ WG
Sbjct: 109 ATLEKDVVLELMEAKANNGWLKVKHRDGITGYVLVSSTWG 148
>gi|308174459|ref|YP_003921164.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
7]
gi|307607323|emb|CBI43694.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens DSM 7]
Length = 517
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 12/162 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI I L P + E I + N R GPG+ Y + + KG
Sbjct: 8 LILCGVIITALLPSFHTAVAAEGE--------AVIATDKINVRGGPGLSYEIK-AEVKKG 58
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWNRKTNNPIYINLYKKP 142
++KE +W Q++ G GW+ L++ + T+ + + K P
Sbjct: 59 ERYPILKEEGDWVQLQLSPGKTGWVVSWLITKTAGGADNASAKSGTVTSTDPDLRIRKGP 118
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ K G ++ + + W T GW+ + +
Sbjct: 119 GTSYEVIGKFPQGAHASMLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
VT R GPG Y V+ + +G ++ + W I + GT GW++ +
Sbjct: 105 VTSTDPDLRIRKGPGTSYEVIGKF-PQGAHASMLDKNSGWVNIS-YQGTTGWVSSEYVTA 162
Query: 116 -SGKRSAIVSPWNRKTNNPIY----INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
SG I + + N +N+ S I+ K+ G ++I W
Sbjct: 163 DSGGSDTIANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSRGTKVSILSEDHGWLKI 222
Query: 171 YNLDTEGWIKKQKI 184
GW I
Sbjct: 223 EANGQRGWAASHYI 236
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 12/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R + T L++G V ++ E W +I +G GW +
Sbjct: 182 TVGVSSLNVRSAASHDSAI-MTKLSRGTKVSILSEDHGWLKIE-ANGQRGWAASHYIIKD 239
Query: 119 RSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S + NL + IV + + G I SG+W
Sbjct: 240 SDSSDSASGLGDGSDTSKKAYIVYGGTNLRSSASTSASIVKRADKGAAYPIVGSSGKWYE 299
Query: 170 GY-NLDTEGWIK 180
++
Sbjct: 300 VRLENGQTAYVA 311
>gi|16079812|ref|NP_390636.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus subtilis
subsp. subtilis str. 168]
gi|81342118|sp|O32041|YRVJ_BACSU RecName: Full=Putative N-acetylmuramoyl-L-alanine amidase YrvJ;
Flags: Precursor
gi|2635222|emb|CAB14717.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. subtilis str. 168]
Length = 518
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +IFT A++ + + A E I N R GPG+ Y +
Sbjct: 7 VLIVCIIFTSALFPTFSSVTAAQGE------------AVIATDEMNVRSGPGLSYGIT-A 53
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---IN 137
+ KG ++KE +W QI+ G GW+ L++ + A S +
Sbjct: 54 EVKKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 114 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 160
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS- 124
R GPG Y V+ + +G V+ + W +I + GW++ ++ S+ S
Sbjct: 113 RMRSGPGTSYEVIGKF-PQGSQASVIDKDSGWIKIS-YHSATGWVSSEYVTSGGSSSASD 170
Query: 125 ---------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
T +N+ + I+ K++ G LT+ W
Sbjct: 171 ESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNGL 230
Query: 176 EGWIKKQKI 184
+GW+ +
Sbjct: 231 KGWVASHYL 239
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLS 116
T+ S N R ++ T L +G + V+ E W I +G GW+ + L S
Sbjct: 185 TVGVSSLNVRASASHDAAII-TKLDRGTKLTVLNEKNGWAHIE-VNGLKGWVASHYLLTS 242
Query: 117 GKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + NL + IV + G TI G W
Sbjct: 243 SVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKGSWYEI 302
Query: 171 YNLDTE 176
+ +
Sbjct: 303 KLDNGQ 308
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++V KG + +W +I+ +G ++ ++ +SA +
Sbjct: 269 NLRSDASTSASIV-ERAAKGDSYTITGSKGSWYEIKLDNGQTAYVANWVVQTSKSAEEAG 327
Query: 126 WNRKTNNP 133
+++P
Sbjct: 328 EPPVSDSP 335
>gi|169829347|ref|YP_001699505.1| cell-wall amidase lytH [Lysinibacillus sphaericus C3-41]
gi|168993835|gb|ACA41375.1| Probable cell-wall amidase lytH precursor [Lysinibacillus
sphaericus C3-41]
Length = 526
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 9/165 (5%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + + + + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLIVTIAIPNKNFIQNASADTSDLKV------AGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T L +G P+ + +W Q++ GW+ L + + + + +N+
Sbjct: 58 T-LEEGDPLTSIDREGDWIQVK-AGSYEGWVASWLTASTST-QKTIDKTVISQVDRLNIR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 115 TDPDISSAVLGQLSTGNQANLIEENNEWAKIDWNGQSGWVSKDYV 159
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 21/161 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+A +K + + V + R N R P I V+ L+ G +++E W
Sbjct: 85 WVASWLTASTSTQKTIDKTVISQVDRLNIRTDPDISSAVLGQ-LSTGNQANLIEENNEWA 143
Query: 99 QIRDFDGTIGWINKSLLS------------------GKRSAIVSPWNRKTNNPIYINLYK 140
+I D++G GW++K ++ + V+ T +N+ K
Sbjct: 144 KI-DWNGQSGWVSKDYVTINDSPKKETKPKEDSVEVSTTTTPVNKDTTFTILVDALNVRK 202
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
KPD+ + + V G + W D + GW+
Sbjct: 203 KPDLNAKKIGTVTKGQAYKVLAHEHNWVQIQYNDKKAGWVY 243
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 8/129 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T +TKG +V+ NW QI+ D GW+ +
Sbjct: 192 TILVDALNVRKKPDLNAKKIGT-VTKGQAYKVLAHEHNWVQIQYNDKKAGWVYSFYGTFS 250
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + + + NL + ++ +V+ G I ++
Sbjct: 251 NKVKSTSKSSSSKDLESVTIIYNGTNLRTDASTAAEVIERVDAGKTYPIVGVKNDFYEIQ 310
Query: 172 NLDTEGWIK 180
++
Sbjct: 311 LDKETAFVA 319
>gi|126653966|ref|ZP_01725803.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
gi|126589523|gb|EAZ83665.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
Length = 526
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 9/165 (5%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL + +IF L + + + + + + + R GPG+ Y ++
Sbjct: 4 KILHSIIIFVLIVTIAIPNKNFIQNASADTSDLKV------SGTILHLREGPGLSYPIIT 57
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T L +G P+ + +W Q++ GW+ L + + + + +N+
Sbjct: 58 T-LDEGDPLTSIAREGDWIQVK-AGSYEGWVASWLTTSTST-QKTIDKTVISQVDRLNIR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 115 TDPDISSAVLGQLSTGNQANLLEENNEWAKIDWNGLSGWVSKDYV 159
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 21/161 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+A +K + + V + R N R P I V+ L+ G +++E W
Sbjct: 85 WVASWLTTSTSTQKTIDKTVISQVDRLNIRTDPDISSAVLGQ-LSTGNQANLLEENNEWA 143
Query: 99 QIRDFDGTIGWINKSLLS------------------GKRSAIVSPWNRKTNNPIYINLYK 140
+I D++G GW++K ++ + V+ T +N+ K
Sbjct: 144 KI-DWNGLSGWVSKDYVTINDSPKKEKEPKEDSVEVSTTTTPVNKDTTFTILVDALNVRK 202
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
KPD+ + + V G + W D + GW+
Sbjct: 203 KPDLNAKKIGTVTKGKAYKVLAHEHNWVQIQYNDKKAGWVY 243
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 8/129 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T +TKG +V+ NW QI+ D GW+ +
Sbjct: 192 TILVDALNVRKKPDLNAKKIGT-VTKGKAYKVLAHEHNWVQIQYNDKKAGWVYSFYGTFS 250
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + + + NL + +V +V+ G I ++
Sbjct: 251 NKVKSTSKSSSSKDLESVTIIYNGTNLRTDASTAAEVVERVDAGKTYPIVGVKNDFYEIQ 310
Query: 172 NLDTEGWIK 180
++
Sbjct: 311 LDKETAFVA 319
>gi|328957463|ref|YP_004374849.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
gi|328673787|gb|AEB29833.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
Length = 438
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 10/158 (6%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+F +A++ L + + + + AS N R GPG+ Y + T +T G
Sbjct: 16 LFIIALFIGLTTFATVVLANQGT--------IKVDASVVNVRTGPGLSYDI-MTQVTGGE 66
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V ++ E W ++R + IGWI L+ + +N+ + + S
Sbjct: 67 KVTMLTEENEWYKVRLSNDQIGWIASWLIENTE-VSAATNKIGVVTGEEVNIRSESNADS 125
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ KV G LT+ W WI + I
Sbjct: 126 TILGKVVNGTELTVLFQQEGWTQIQYYGQVAWISSELI 163
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 24/190 (12%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
T EK+ + ++ L N I +A + ++ + K +
Sbjct: 63 TGGEKVTMLTEENEWYKVRLSNDQIGWIASWLIENTEVSAATNKIGV----------VTG 112
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGK 118
N R T++ + G + V+ + E W QI+ + G + WI+ L+ S
Sbjct: 113 EEVNIRSESNADSTILGKVVN-GTELTVLFQQEGWTQIQ-YYGQVAWISSELIEITESAT 170
Query: 119 RSAIVS-------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ V+ P T N+ P ++S +VA E G T G+W
Sbjct: 171 ETTTVAVAEENSAPIQTVTTRSGSTNIRTSPSVESSVVATAEKGESFTYLSAEGDWYQIE 230
Query: 172 -NLDTEGWIK 180
G++
Sbjct: 231 LASGETGYVA 240
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 10/143 (6%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+S + + +A++ E + VT ++ N R P + +VV T
Sbjct: 159 SSELIEITESATETTTVAVAEENSAPIQT-----VTTRSGSTNIRTSPSVESSVVAT-AE 212
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL----Y 139
KG + +W QI G G++ ++ + +P T+ + +
Sbjct: 213 KGESFTYLSAEGDWYQIELASGETGYVANWVVDLSANKTPAPPANITSLAEATIVIDAGH 272
Query: 140 KKPDIQSIIVAKVEPGVLLTIRE 162
D ++ + E V L +
Sbjct: 273 GGDDPGALAHSFYEKDVTLDTAK 295
>gi|149184018|ref|ZP_01862381.1| hypothetical protein BSG1_19095 [Bacillus sp. SG-1]
gi|148848271|gb|EDL62558.1| hypothetical protein BSG1_19095 [Bacillus sp. SG-1]
Length = 385
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 59/170 (34%), Gaps = 12/170 (7%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K L +I L F P L L V I N R GPG+ +
Sbjct: 1 MIKKSLYTFIILLL--LFGSLPSLNLDKAAGAETT------VIIDTHTLNVRKGPGLSFP 52
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + KG +V +W +I+ GW+ L+ K S S T +
Sbjct: 53 VT-EQVHKGEEFKVASTENDWYKIQLNSSETGWVANWLVKVKSS---SNHQNGTVTDNGL 108
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + P I+ + G + I + SG W GW+ K I G
Sbjct: 109 RMREGPGTNFPIIDTLSKGQEVKITDSSGSWYKITVGSKSGWVHKDYIAG 158
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
T+ + R GPG + ++ L+KG V++ +W +I GW++K +
Sbjct: 102 TVTDNGLRMREGPGTNFPII-DTLSKGQEVKITDSSGSWYKIT-VGSKSGWVHKDYIAGG 159
Query: 116 ------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
SG + + +N+ + I+ K+ +++ W
Sbjct: 160 STPSQNSGSTPPVNKEDWTGVSTVNSLNVRSTAGLNGSIIGKLNKSNKVSVTGSVSNWYR 219
Query: 170 GYNLDTEGWIKKQKI 184
+EGW+ Q +
Sbjct: 220 IKFGGSEGWVSSQYL 234
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 19/159 (11%)
Query: 37 APILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ + EK P+ F + N R + V + G E+++E
Sbjct: 227 GWVSSQYLEKSTTSPAPVTNQGAFGKVTVYSLNVRDKASLNGRVT-DSVKHGEVYEILEE 285
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP--------IYINLYKKPDIQ 145
NW ++ +G GW + +++ SP N+ NL K
Sbjct: 286 KNNWYKLSLKEGKTGWAAGWYI--EKTVGSSPEEPIGNSKSGYVQILYNGTNLRSKASTN 343
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-----GWI 179
S IVA+ G I+E +GEW + GWI
Sbjct: 344 SSIVARASAGESFAIQEQTGEWYKIALKSGQSAYVAGWI 382
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V I + N R ++V + G + ++ W +I G ++ ++S
Sbjct: 326 YVQILYNGTNLRSKASTNSSIV-ARASAGESFAIQEQTGEWYKIALKSGQSAYVAGWIVS 384
>gi|296134063|ref|YP_003641310.1| N-acetylmuramoyl-L-alanine amidase [Thermincola sp. JR]
gi|296032641|gb|ADG83409.1| N-acetylmuramoyl-L-alanine amidase [Thermincola potens JR]
Length = 557
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I A+ N R GPG Y V+ T + KG+ ++V+++ W + DG GW+ ++
Sbjct: 92 VVITATSLNVRNGPGTTYKVIAT-VKKGMVLKVLRQTTGWYNVVLPDGRNGWVAAGYVTV 150
Query: 118 KRSAIVSPWNRKTNNPIY----------------INLYKKPDIQSIIVAKVEPGVLLTIR 161
K +P K P +N+ P + AKV G + I
Sbjct: 151 KNLNQPNPQVPKPETPGADLGTPTEKNGVVKGGIVNVRSGPGTTYPVAAKVTNGTRVRIT 210
Query: 162 ECSGEWCFGYN-LDTEGWIKKQKI 184
+ EW EGWI K +
Sbjct: 211 RETAEWYKVTLPDGKEGWIAKYLV 234
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P + P + +K N R GPG Y V +T G V + +E W
Sbjct: 158 PQVPKPETPGADLGTPTEKNGVVKGGIVNVRSGPGTTYPVA-AKVTNGTRVRITRETAEW 216
Query: 98 RQIRDFDGTIGWINKSLL 115
++ DG GWI K L+
Sbjct: 217 YKVTLPDGKEGWIAKYLV 234
>gi|253998267|ref|YP_003050330.1| hypothetical protein Msip34_0555 [Methylovorus sp. SIP3-4]
gi|313200340|ref|YP_004038998.1| hypothetical protein MPQ_0580 [Methylovorus sp. MP688]
gi|253984946|gb|ACT49803.1| protein of unknown function DUF1058 [Methylovorus sp. SIP3-4]
gi|312439656|gb|ADQ83762.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 151
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ ++A+ L P +A + E +PR + A G G V+ G
Sbjct: 8 VLLSIAMILALTPSVASALEYRSVA---VPRAILYDAP-----SGQGKKLYVIWQ----G 55
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P+EV+ +W ++RD G + WI L+ KR+ IV ++ + D
Sbjct: 56 YPLEVIVNLGDWIKVRDNRGGLNWIEAKQLATKRTVIVI--------ATQASIQQSADAA 107
Query: 146 SIIVAKVEPGVLLTIRECSG-EWCFGYN-LDTEGWIKKQKIWG 186
S +V VE V+L + E SG W + G++ +WG
Sbjct: 108 SSVVGTVEKDVVLDMLEMSGNGWIKVRHRDGLVGYLPTTAVWG 150
>gi|78043744|ref|YP_361279.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995859|gb|ABB14758.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 618
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 19/178 (10%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYL--APILALSHEKEIFEKKPLPRFVTIKASRANSR 68
R + L+ L F+ P+LA S + + AS N R
Sbjct: 2 RKGCRSNLRGQALAFLLVFLFSIFFGFRLPVLAAS-------------YGVVTASTLNVR 48
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK--RSAIVSPW 126
GPGI Y + L++G VE+ + W +IR + G+++ +S S
Sbjct: 49 SGPGINYAKIGV-LSRGQKVEITAKTGEWFKIR-YKNGYGYVSGKYISPVVGSSRSTQAS 106
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P + I K+ + I + W + GW+ K I
Sbjct: 107 RTGIVTATILNVRTTPSTSAAIAGKLAKNTRVEIYKEQNGWYYIKAGSIAGWVVKTYI 164
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A+ N R P + L K VE+ KE W I+ GW+ K+ +
Sbjct: 111 VTATILNVRTTPSTSAAIAGK-LAKNTRVEIYKEQNGWYYIK-AGSIAGWVVKTYIKVTE 168
Query: 116 -----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
S ++I + +NL P ++ + G + + S
Sbjct: 169 TSRGTTPTPPQSSTNTSIKTISGVYAVKATSLNLRSGPGTSYSVIKTLPQGTKVEGLQVS 228
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W T GW+ K +
Sbjct: 229 GDWMKVKAGSTTGWVAKAYL 248
>gi|164687863|ref|ZP_02211891.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
gi|164603138|gb|EDQ96603.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
Length = 375
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+I S N R GPG Y++ + G V+++ + W + GT GWI K ++
Sbjct: 98 SINISAVNVRSGPGNGYSIKKV-ASYGTKVKLLNKSGGWYNVELPSGTNGWIYKKYINTS 156
Query: 119 RSAI--------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ N K +N+ P I AK+ G ++ + + S W
Sbjct: 157 GHTEDDDNKSDGFNSCNGKVTCKSNLNVRSGPSTSYSIKAKLTHGQVIKLTDKSNGWYKV 216
Query: 171 Y-NLDTEGWIKKQKI 184
T GW+K I
Sbjct: 217 SLTNGTTGWVKDDYI 231
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ S N R GPG Y+ + T + KG + V++ + W ++ +G GW+ +
Sbjct: 28 VTVNVSALNVRSGPGTDYSKIGT-VYKGSSLTVLETNDMWYHVKLNNGLKGWVYSRYV-K 85
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTE 176
K + + +N + N +N+ P I G + + SG W T
Sbjct: 86 KEYSSNTTYNTGSINISAVNVRSGPGNGYSIKKVASYGTKVKLLNKSGGWYNVELPSGTN 145
Query: 177 GWIKKQKI 184
GWI K+ I
Sbjct: 146 GWIYKKYI 153
>gi|147677121|ref|YP_001211336.1| hypothetical protein PTH_0786 [Pelotomaculum thermopropionicum SI]
gi|146273218|dbj|BAF58967.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 587
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 18/142 (12%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ V I N R GPG Y VV +G V++E W ++R G GW+ L+
Sbjct: 102 QAVLINGDLVNIRSGPGTGYGVV-AQAGRGERFPVLEESAGWYKVRLGTGAAGWVAGWLV 160
Query: 116 SGKRSAIVSP----------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
S + SA+ +N+ P S I+ + G L+
Sbjct: 161 SLETSAVPVAPVIPPSSPGAGGAAADGKTAVVTASVLNVRSGPGTSSGIIGQAVQGDSLS 220
Query: 160 IRECSGEWCFGY-NLDTEGWIK 180
I SG+W + GW+
Sbjct: 221 ILGQSGDWYRVRLSDGKTGWVA 242
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GPG Y V+ + V+ + W Q+R DG GW+ L++ + S
Sbjct: 44 RGGPGTGYAVISQ-AGLNERLAVLSKTGEWYQVRLSDGRNGWVAGWLVNIENSVPQGGGQ 102
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIK 180
N +N+ P +VA+ G + E S W GW+
Sbjct: 103 AVLINGDLVNIRSGPGTGYGVVAQAGRGERFPVLEESAGWYKVRLGTGAAGWVA 156
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ AS N R GPG ++ + +G + ++ + +W ++R DG GW+ L+S
Sbjct: 190 AVVTASVLNVRSGPGTSSGIIGQAV-QGDSLSILGQSGDWYRVRLSDGKTGWVAGWLVSV 248
Query: 118 K 118
+
Sbjct: 249 R 249
>gi|319945280|ref|ZP_08019542.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741850|gb|EFV94275.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
Length = 208
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 60/150 (40%), Gaps = 14/150 (9%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ + RF +I P + +G+PVEV+ + W ++R
Sbjct: 69 STKAPPPSRIPGMARFRSIGTDDTVMYDAPSDKAKKLYQ-APRGMPVEVIAVLQGWVKVR 127
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D +G I W+ + LS +R+ + S + LY++P+ + + GV+ +
Sbjct: 128 DMEGDIAWVLRDDLSDRRTVVAS---------TTVPLYQEPNADAPQWFEAARGVVFELE 178
Query: 162 E---CSGEWCFG-YNLDTEGWIKKQKIWGI 187
+ + + G+++ ++WGI
Sbjct: 179 DDKPDDAGFVRVRHADGQSGYVELGQVWGI 208
>gi|319651678|ref|ZP_08005805.1| hypothetical protein HMPREF1013_02417 [Bacillus sp. 2_A_57_CT2]
gi|317396745|gb|EFV77456.1| hypothetical protein HMPREF1013_02417 [Bacillus sp. 2_A_57_CT2]
Length = 581
Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 13/163 (7%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ LI + + A + K +P + N R GPG+ Y ++
Sbjct: 4 RKPLILVICLMLLAGITQAETQVKAENSSVTIP------TNNLNVRQGPGLSYPILGQ-A 56
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-----N 137
KG + +W +I +F G G++ L+S ++ TN+ I
Sbjct: 57 QKGDQFNALSREGDWIKI-NFQGENGYVASWLVSDTTTSQTGEKAASTNSQAIITTDGLR 115
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ K P ++ ++ G ++ G W +GW+
Sbjct: 116 VRKGPGTSYGVLGTIQKGTAYKVKSTEGSWVKIQTQYGDGWVA 158
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---S 116
I R GPG Y V+ T + KG +V +W +I+ G GW+ +
Sbjct: 109 ITTDGLRVRKGPGTSYGVLGT-IQKGTAYKVKSTEGSWVKIQTQYGD-GWVANEFVQYSG 166
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ S +N+ KP + S ++ K+ G + + + W
Sbjct: 167 SQKKNSSSSSQTGKITANSLNVRNKPSLNSDVIGKLNSGETVAVISQNDSWTEISFSGNA 226
Query: 177 GWIKKQKI 184
GWI Q I
Sbjct: 227 GWISSQYI 234
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 12/131 (9%)
Query: 59 TIKASRANSRIGPGIM-YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
T+ A+ R + + + P ++++ +NW +I G+ GW+ +
Sbjct: 255 TVTATSLTVRNKGSLNGKPIGSVTKGQTFP--ILEQADNWAKIEYQTGSYGWVASWFIDI 312
Query: 116 -----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
SG V+ + + N+ KK QS ++ + G I + +W
Sbjct: 313 AAEKNSGSSQQSVNGSSAIILH-NGSNIRKKASSQSSVIHRANKGDSFEIISLNDDWYEV 371
Query: 171 YN-LDTEGWIK 180
G++
Sbjct: 372 RLPNGGTGFVA 382
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIV 123
N R +V+ KG E++ ++W ++R +G G++ +++ G A+
Sbjct: 338 NIRKKASSQSSVI-HRANKGDSFEIISLNDDWYEVRLPNGGTGFVAGWIVTVEGSAPAVT 396
Query: 124 SPWNRKTNNPIYINL 138
P + I L
Sbjct: 397 KPGAEQHLENKTIVL 411
>gi|82702254|ref|YP_411820.1| hypothetical protein Nmul_A1125 [Nitrosospira multiformis ATCC
25196]
gi|82410319|gb|ABB74428.1| Protein of unknown function DUF1058 [Nitrosospira multiformis ATCC
25196]
Length = 162
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F +I + P + V ++ LPVE + + + W ++RD +G + W+ + L
Sbjct: 38 EFYSINDNGVIMYDAPSLKAGKVYV-ASRNLPVEAIVKVDGWVKVRDSEGALAWVEEKAL 96
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYN-L 173
S KR +V+ ++Y+ I S ++ +V+ GV+L + + W +
Sbjct: 97 SEKRHILVTSP--------LADVYQVATINSPLMFQVQQGVILEWLEPPANGWVRVRHRD 148
Query: 174 DTEGWIKKQKIWG 186
G+++ ++WG
Sbjct: 149 GQTGYVRTSQVWG 161
>gi|134300528|ref|YP_001114024.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
gi|134053228|gb|ABO51199.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
Length = 616
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 22/182 (12%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + + +++ L P+ + V + + N R GP
Sbjct: 1 MILNLIYKRFFRYAVLAGLVFSIMFNPVGVNQPAYAT-------QVVIVNVDKLNLRSGP 53
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA---------- 121
T + TKG + V+ + +W +++ G W L+S K +
Sbjct: 54 DTN-TAMMGQATKGTKLPVLAKNGDWYKVQ-IGGKTAWAAGWLVSVKDTPGKSAPAKAPE 111
Query: 122 ---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
V+ +N+ P I KV+ G LT+ G+W + GW
Sbjct: 112 GTPAVNSGKVAVVKGDNLNIRSGPGTTYGIAGKVKKGDRLTVLTQKGDWIKVQGANVTGW 171
Query: 179 IK 180
+
Sbjct: 172 VA 173
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 16/154 (10%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + E + +K N R GPG Y + + KG + V+ + +W ++
Sbjct: 105 APAKAPEGTPAVNSGKVAVVKGDNLNIRSGPGTTYGIAGK-VKKGDRLTVLTQKGDWIKV 163
Query: 101 RDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNP-----------IYINLYKKPDIQSI 147
+ GW+ L++ K +A S + P +NL P
Sbjct: 164 Q-GANVTGWVASWLVAVENKPTAPASVTSPTIAKPAPAGQVVVINSDNLNLRSGPGTSHS 222
Query: 148 IVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ +V G+ L I SG+W + W+
Sbjct: 223 VAGQVSRGIRLPIISRSGQWLQVRQANGSTAWVA 256
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
A I + P + V I + N R GPG ++V +++G+ + ++ W
Sbjct: 185 APASVTSPTIAKPAPAGQVVVINSDNLNLRSGPGTSHSVAGQ-VSRGIRLPIISRSGQWL 243
Query: 99 QIRDFDGTIGWINKSLLS 116
Q+R +G+ W+ L+S
Sbjct: 244 QVRQANGSTAWVAGWLVS 261
>gi|217969960|ref|YP_002355194.1| hypothetical protein Tmz1t_1540 [Thauera sp. MZ1T]
gi|217507287|gb|ACK54298.1| protein of unknown function DUF1058 [Thauera sp. MZ1T]
Length = 165
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 19/172 (11%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+P + LA++ L + I + ++ AS R P
Sbjct: 11 IPSAPLGRALLMLAVFAPLGGAALPVAAQAI-------EYRSVAASTL-LREQPAPDAEA 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ L G PVE+V + W ++RD G GW+ L +R+ IV+
Sbjct: 63 LFR-LRPGTPVEIVVREDGWMRVRDPAGGFGWVEGGALVTRRTVIVT--------AERAI 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFG-YNLDTEGWIKKQKIWGI 187
+ + + + V+L + E S W + EG++ ++WG+
Sbjct: 114 VRRAAQETAAPAFEATRNVVLELLEPASEGWARVRHVEGFEGYVHASEVWGL 165
>gi|194017388|ref|ZP_03056000.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus ATCC 7061]
gi|194011256|gb|EDW20826.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus ATCC 7061]
Length = 526
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 18/175 (10%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
N ++ L + +A L ++H ++ + N R GPG+ Y + +
Sbjct: 6 HNQMMMLLTCFVLIASTLPMAHATAQTDQ------AVVATDEINVRTGPGLSYGIAAV-V 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN----------- 131
+G ++ + W QI +G GW+ L++ + S + N
Sbjct: 59 KRGESYPILTKQGEWVQIGLSNGQKGWVVSWLITTSSGSQKSAKPKTQNQSSAESSSITS 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + P +V G + SGEW GW+ + G
Sbjct: 119 TASDLRIRTGPGTSYQVVGTFPQGASAKKLQTSGEWTKISYKQAVGWVHSDYVSG 173
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 9/127 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
AS R GPG Y VV T+ +G + ++ W +I + +GW++ +SG +
Sbjct: 119 TASDLRIRTGPGTSYQVVGTF-PQGASAKKLQTSGEWTKIS-YKQAVGWVHSDYVSGGQK 176
Query: 121 A-------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
A T +N+ + + +VA + +TI W
Sbjct: 177 AAQSSSGESSRSKQTGTVGVSSLNVRQSAAPNAQVVASLARNTQITILREQNGWYEIEAK 236
Query: 174 DTEGWIK 180
+GW
Sbjct: 237 GVKGWAA 243
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 12/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
T+ S N R VV L + + +++E W +I G GW +
Sbjct: 193 TVGVSSLNVRQSAAPNAQVV-ASLARNTQITILREQNGWYEIE-AKGVKGWAASYYIVTS 250
Query: 116 ------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
K S+ + + N+ K + I + G I G+W
Sbjct: 251 NGASSEGEKNSSSSASQKKAYIVYDGTNIRKSASTSAQIAERATKGAAYQIVRTQGDWYE 310
Query: 170 GY-NLDTEGWIK 180
+ G++
Sbjct: 311 VTLSNGGTGYVA 322
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R + TKG ++V+ +W ++ +G G++ ++ +
Sbjct: 272 IVYDGTNIRKSASTSAQIA-ERATKGAAYQIVRTQGDWYEVTLSNGGTGYVASWVVQTNK 330
Query: 120 SAIVSPWNRKTNNPIYINL 138
++ +P ++ ++ +L
Sbjct: 331 NSSEAPRPQQDSSSGTGSL 349
>gi|20807361|ref|NP_622532.1| cell wall-associated hydrolase (invasion-associated proteins)
[Thermoanaerobacter tengcongensis MB4]
gi|20515879|gb|AAM24136.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Thermoanaerobacter tengcongensis MB4]
Length = 306
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R + +V+ T ++K V V+++ +W +IR DG GWI LS +
Sbjct: 38 VTGNYVNVRTEGSLSGSVI-TQVSKDEVVTVLEKQGDWYRIRLSDGREGWIYGEYLSVRS 96
Query: 120 SAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
S VS + Y+NL + + ++ ++ G + + + W +
Sbjct: 97 SNGVSRGDTGEVSVGVVTGNYVNLRSEGSLSGKVLMQLSKGTQVEVLDRQNGWYKVKLSN 156
Query: 174 DTEGWIKKQKI---WGIYP--GEV 192
EGWI ++ + G+Y GEV
Sbjct: 157 GQEGWIYREYLSVRSGVYASRGEV 180
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
Y+N+ + + ++ +V ++T+ E G+W + EGWI
Sbjct: 28 VFAEGLGVGKVTGNYVNVRTEGSLSGSVITQVSKDEVVTVLEKQGDWYRIRLSDGREGWI 87
Query: 180 KKQKI 184
+ +
Sbjct: 88 YGEYL 92
>gi|226311473|ref|YP_002771367.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226094421|dbj|BAH42863.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 631
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 20/179 (11%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+I + + KIL + L AI ++ A V + + N
Sbjct: 13 RISERMSIVFVRQKILMSLLTVVCAISLPVSAAWAAGS-------------VQVTVDKLN 59
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS----GKRSAI 122
R GP + +V + K + + V+ +W Q++ +G GW+ L+S ++ A
Sbjct: 60 VRSGPSLQDAIVTSLPNKTV-LPVISTKNDWIQVKLPNGQSGWVANWLVSTQQQQQKPAT 118
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
VS ++ +N+ P +V + PG I + SGEW N T+GW+
Sbjct: 119 VSTKQVESTT-TNLNVRSGPGQTYAVVQTINPGTRYPIVQTSGEWLQIQLNAGTKGWVA 176
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+K N R P + T+ G + V+++ +W +I+ DG GW+ ++
Sbjct: 305 ATVKTDGLNLRSEPNTSSAIQTTF-PVGSKLSVLEKQGDWYRIKAADGKTGWVAGQHITV 363
Query: 118 KRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+ ++ +P T N+ P ++ +V+PG I SGEW +
Sbjct: 364 DQPSMPTPSGPYVTVMNPDTNVRSGPSTDHAVIKQVQPGEKYGIANKSGEWFQVNFPDGS 423
Query: 176 EGWIK 180
G+I
Sbjct: 424 TGYIA 428
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 31/159 (19%)
Query: 55 PRFVTIK-----ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
P V+ K + N R GPG Y VV + G +V+ W QI+ GT GW
Sbjct: 116 PATVSTKQVESTTTNLNVRSGPGQTYAVV-QTINPGTRYPIVQTSGEWLQIQLNAGTKGW 174
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYIN-------------------------LYKKPDI 144
+ L+ + + P N +Y PD
Sbjct: 175 VANWLVKEVGTGQAVSPPSTGSTPPTTNPAGTGSQPKPPALQGTSLTLDFAPYVYATPDT 234
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + ++ G +T+ W W+ +
Sbjct: 235 STPAIGQLHAGEKITVLNRQNGWIQFPYDGVNAWLSTDQ 273
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 39 ILALSHEKEIFEKKPLPR--FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+A H P P +VT+ N R GP + V+ + G + +
Sbjct: 355 WVAGQHITVDQPSMPTPSGPYVTVMNPDTNVRSGPSTDHAVI-KQVQPGEKYGIANKSGE 413
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
W Q+ DG+ G+I L+S + V N I ++
Sbjct: 414 WFQVNFPDGSTGYIAGWLVSANGAQAVVRSNDLVGKVIVVD 454
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 20/132 (15%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP----- 125
P + L G + V+ W Q +DG W++ + P
Sbjct: 232 PDTSTPAIGQ-LHAGEKITVLNRQNGWIQFP-YDGVNAWLSTDQTNPNTGQPTLPEIGNG 289
Query: 126 ------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
T +NL +P+ S I G L++ E G+W
Sbjct: 290 NTQPQTGQPSSSSQTATVKTDGLNLRSEPNTSSAIQTTFPVGSKLSVLEKQGDWYRIKAA 349
Query: 173 LDTEGWIKKQKI 184
GW+ Q I
Sbjct: 350 DGKTGWVAGQHI 361
>gi|255655316|ref|ZP_05400725.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-23m63]
gi|296451301|ref|ZP_06893041.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296880347|ref|ZP_06904310.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
gi|296259907|gb|EFH06762.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296428588|gb|EFH14472.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
Length = 606
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ L KG VEV+ E W +I+ +DG +G+++ S L
Sbjct: 101 VTSNSLNMRNGAGTSYRVITV-LKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYLGDVS 158
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ + K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 159 NS-TNKSKTKQVNTTSLNVRSGPNTSYGLLGKLSKGSKVEVISESNGWSKIKYNGKDAYV 217
Query: 180 KKQKI 184
+
Sbjct: 218 SSMYL 222
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 3/127 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R P ++ K V + W +I+ G GW + ++
Sbjct: 29 VTINYLNVRNEPTAESSIAFV-AKKDDKVLIKDSSNGWYKIKAESGQEGWASSKYIAKLN 87
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S S K +N+ ++ ++ G + + S W G
Sbjct: 88 GDSLRTSTNKEKQVTSNSLNMRNGAGTSYRVITVLKKGQKVEVISESNGWSKIKYDGRLG 147
Query: 178 WIKKQKI 184
++ +
Sbjct: 148 YVSSSYL 154
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP Y ++ L+KG VEV+ E W +I+ ++G +++ LS
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGK-LSKGSKVEVISESNGWSKIK-YNGKDAYVSSMYLSDVS 226
Query: 120 SAIVSPWNRKTNNPIY--------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ + +N+ P + KV G +T+ S W
Sbjct: 227 QSNSDDSSQSNDKKNTDKFVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKIN 286
Query: 172 NLDTEGWI 179
+ E ++
Sbjct: 287 FNNKEAFV 294
>gi|89100796|ref|ZP_01173649.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
gi|89084499|gb|EAR63647.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
Length = 581
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
I S N R GPG+ Y++V KG ++KE +W Q+ G+ GW+ L
Sbjct: 36 IADSGVNIRGGPGLSYSIV-KQAAKGDRYPILKESGDWLQLNLGGGSTGWVAGWLAVKEA 94
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K SA VS T + + P + ++A + G I E G W
Sbjct: 95 GKKESASVSSG--GTVTADGLRVRSNPGTDASVIAVLNKGQKAGIIEKEGNWVRITGSFG 152
Query: 176 EGWIKKQKI 184
GW+ I
Sbjct: 153 NGWVSADFI 161
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ A R PG +V+ L KG ++++ NW +I G GW++ ++ G
Sbjct: 107 TVTADGLRVRSNPGTDASVIAV-LNKGQKAGIIEKEGNWVRITGSFGN-GWVSADFITEG 164
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
A + T +N+ P Q ++ K++ G ++I +G W
Sbjct: 165 SSKAEAASAAEGTVTGDSLNVRSAPGTQGTVLGKLQSGDRVSIVSDNGSWTEIIFRGNHA 224
Query: 178 WI 179
W+
Sbjct: 225 WV 226
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R + V+ + ++KG +++E NW +I G+ GWI L
Sbjct: 256 TVTAQTLNLRDTSSLNGKVLGS-VSKGETYSIIEEKNNWAKIEYKPGSYGWIAAWYLDKS 314
Query: 119 RSAIVSPWNRKTNNPIYI-----NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + + I I N+ K S ++ G + +W
Sbjct: 315 EVSPANGSKPAKGSTITILHNGTNIRKDASTGSSVLQLANSGESFEVLGREKDWYKISLD 374
Query: 174 DTEGWIK 180
G++
Sbjct: 375 GKAGYVA 381
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 50/145 (34%), Gaps = 16/145 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---- 114
T+ N R PG TV+ L G V +V + +W +I F G W++
Sbjct: 177 TVTGDSLNVRSAPGTQGTVLGK-LQSGDRVSIVSDNGSWTEII-FRGNHAWVSSEFISSS 234
Query: 115 --LSGKRSA----IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
LS SA S T +NL + ++ V G +I E W
Sbjct: 235 KSLSQNPSAGSSAKPSGRLTGTVTAQTLNLRDTSSLNGKVLGSVSKGETYSIIEEKNNWA 294
Query: 169 FGYNL-DTEGWIKKQKIWGIYPGEV 192
+ GWI W + EV
Sbjct: 295 KIEYKPGSYGWIAA---WYLDKSEV 316
>gi|255315124|ref|ZP_05356707.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
Length = 378
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ I AI LA ++E E+ R TI + N R GPG + + L
Sbjct: 9 AASIMATAIIMPTMGNLAYANESEVESVSIESR--TITGNAVNFRKGPGTNHESMGK-LY 65
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTNNPIYIN 137
KG VE V + +W +++ ++G G+++ SL S S+ S + K +N
Sbjct: 66 KGDKVEYVGKEGSWVKVK-YNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++K+++ N R GP + + T L G V + E W +I +G +G+++
Sbjct: 111 SVKSTKVVTAKGLNFRTGPSTSSSKIST-LGYGTEVGYISESNGWSKIS-SNGRVGYVSS 168
Query: 113 SLLSGK----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
L S+ K +N+ P +A + G +
Sbjct: 169 KYLGTSVNDSTNENVENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSIS 228
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
SG W + G++ Q +
Sbjct: 229 ESGGWTKVSYGNQTGYVSSQYL 250
>gi|152982073|ref|YP_001354908.1| hypothetical protein mma_3218 [Janthinobacterium sp. Marseille]
gi|151282150|gb|ABR90560.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 149
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 22/165 (13%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
++ +F + + L A + E + P + P V
Sbjct: 4 SAPLFPVLLLTILGASAAHAVEYKSVGNNPAVLY-----------NAPTEKGRKVFV-AP 51
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G+PVEVV W ++RD G + WI LS KR+ IV+ N K L+ +
Sbjct: 52 RGMPVEVVLTQAGWSKVRDVAGDLAWIEAKALSPKRNVIVTVANLK--------LHTNAE 103
Query: 144 IQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKIWG 186
S +VA + GVLL + S W + G+ K ++WG
Sbjct: 104 EASAVVATADKGVLLELAAPPSAGWVKLKHRDGQTGYAKSSEVWG 148
>gi|255101559|ref|ZP_05330536.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
Length = 396
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ I AI LA ++E E+ R TI + N R GPG + + L
Sbjct: 9 AASIMATAIIMPTMGNLAYANESEVESVSIESR--TITGNAVNFRKGPGTNHESMGK-LY 65
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTNNPIYIN 137
KG VE V + +W +++ ++G G+++ SL S S+ S + K +N
Sbjct: 66 KGDKVEYVGKEGSWVKVK-YNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 18/142 (12%)
Query: 59 TIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++K+++ N R GP + + T L G V + E W +I +G +G+++
Sbjct: 111 SVKSTKVVTAKGLNFRTGPSTSSSKIST-LGYGTEVGYISESNGWSKIS-SNGRVGYVSS 168
Query: 113 SLL----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
L + + S+ K +N+ P +A + G +
Sbjct: 169 KYLGTSVNDSTNENAENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSIS 228
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
SG W + G++ Q +
Sbjct: 229 ESGGWTKVSYGNQTGYVSSQYL 250
>gi|126700017|ref|YP_001088914.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|255307428|ref|ZP_05351599.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
gi|115251454|emb|CAJ69287.1| putative cell wall hydrolase; phosphatase-associated protein
[Clostridium difficile]
Length = 396
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ I AI LA ++E E+ R TI + N R GPG + + L
Sbjct: 9 AASIMATAIIMPTMGNLAYANESEVESVSIESR--TITGNAVNFRKGPGTNHESMGK-LY 65
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTNNPIYIN 137
KG VE V + +W +++ ++G G+++ SL S S+ S + K +N
Sbjct: 66 KGDKVEYVGKEGSWVKVK-YNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 18/142 (12%)
Query: 59 TIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++K+++ N R GP + + T L G V + E W +I +G +G+++
Sbjct: 111 SVKSTKVVTAKGLNFRTGPSTSSSKIST-LGYGTEVGYISESNGWSKIS-SNGRVGYVSS 168
Query: 113 SLL----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
L + + S+ K +N+ P +A + G +
Sbjct: 169 KYLGTSVNDSTNENAENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSIS 228
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
SG W + G++ Q +
Sbjct: 229 ESGGWTKVSYGNQTGYVSSQYL 250
>gi|254975991|ref|ZP_05272463.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255093379|ref|ZP_05322857.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255517794|ref|ZP_05385470.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255650909|ref|ZP_05397811.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|260683980|ref|YP_003215265.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260687640|ref|YP_003218774.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|306520794|ref|ZP_07407141.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
gi|260210143|emb|CBA64304.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260213657|emb|CBE05499.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 396
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ I AI LA ++E E+ R TI + N R GPG + + L
Sbjct: 9 AASIMATAIIMPTMGNLAYANESEVESVSIESR--TITGNAVNFRKGPGTNHESMGK-LY 65
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTNNPIYIN 137
KG VE V + +W +++ ++G G+++ SL S S+ S + K +N
Sbjct: 66 KGDKVEYVGKEGSWVKVK-YNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++K+++ N R GP + + T L G V + E W +I +G +G+++
Sbjct: 111 SVKSTKVVTAKGLNFRTGPSTSSSKIST-LGYGTEVGYISESNGWSKIS-SNGRVGYVSS 168
Query: 113 SLLSGK----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
L S+ K +N+ P +A + G +
Sbjct: 169 KYLGTSVNDSTNENVENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSIS 228
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
SG W + G++ Q +
Sbjct: 229 ESGGWTKVSYGNQTGYVSSQYL 250
>gi|114565698|ref|YP_752852.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114336633|gb|ABI67481.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 907
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Query: 18 MPKILQNS-LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K L +I+F L ILA + IK S N R GPG +
Sbjct: 1 MKKALHIFNYTVLFSIFFSLILILAWAQSSPAAT-------AVIKGSVVNIRQGPGTGHE 53
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ T L + V +++ + W++I+ GW+ SLL K+ I R
Sbjct: 54 IAGT-LYQNTEVAILESKDGWKKIQ-HGSLNGWVADSLLQVKKEEI-----RLQVTADKA 106
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
NL P S V ++ G L + + GEW
Sbjct: 107 NLRSGPSTSSSQVGQLRQGDSLILLDVEGEWYKVQVPGGS 146
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 30/153 (19%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A +AN R GP + V L +G + ++ W +++ G+ +I L+S
Sbjct: 101 VTADKANLRSGPSTSSSQVGQ-LRQGDSLILLDVEGEWYKVQVPGGSSAYIASFLVSKTA 159
Query: 119 ---------------RSAIVSPWNRKTNNPIY--------INLYKKPDIQSIIVAKVEPG 155
+A P + IN+ P + ++
Sbjct: 160 VAANSSSTPAAGSQPETAATVPASSPAPAVTRQVEVISGPINIRSGPGESYPKLGSIDEK 219
Query: 156 VLLTIRECSGEWCFGYNLDTE-----GWIKKQK 183
+ + GEW + GW+ K+
Sbjct: 220 TVYPVISKEGEWYKIRLANGSDAYVAGWLVKES 252
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 6/113 (5%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP---RFVTIKASRANSRI 69
Y+ L + A + P P R V + + N R
Sbjct: 145 GSSAYIASFLVSKTAVAANSSSTPAAGSQPETAATVPASSPAPAVTRQVEVISGPINIRS 204
Query: 70 GPGIMYTVVCTYLTKG-LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
GPG Y + + K P V+ + W +IR +G+ ++ L+ A
Sbjct: 205 GPGESYPKLGSIDEKTVYP--VISKEGEWYKIRLANGSDAYVAGWLVKESSMA 255
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 19/64 (29%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A SP +N+ + P I + + I E W + GW+
Sbjct: 27 AQSSPAATAVIKGSVVNIRQGPGTGHEIAGTLYQNTEVAILESKDGWKKIQHGSLNGWVA 86
Query: 181 KQKI 184
+
Sbjct: 87 DSLL 90
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 28/177 (15%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK----ASRAN--SRIGPGIMYTV 77
+L+ AI+ L + + + V + A N R +
Sbjct: 303 RTLVPLRAIFEALGATVDWDNATRTVTSRKGSTTVVLAIGSLAPTVNGQVRQ---LDVPA 359
Query: 78 VCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINK---------SLLSGKRSAIVSPWN 127
P+ V E + + D++G+ IN S+ SGK++ V+
Sbjct: 360 KIVADRTLAPLRFVGEAFGS---TVDWEGSTRTINIKSPPAPGAPSVGSGKKAVAVTV-- 414
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N INL P + + G + + W W+ + +
Sbjct: 415 ----NKEIINLRSGPSTGHAQLDQARSGERMQVLAAQDGWYQVSRGGKIAWVSGEVV 467
>gi|164686260|ref|ZP_02210290.1| hypothetical protein CLOBAR_02698 [Clostridium bartlettii DSM
16795]
gi|164601862|gb|EDQ95327.1| hypothetical protein CLOBAR_02698 [Clostridium bartlettii DSM
16795]
Length = 305
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 57/159 (35%), Gaps = 4/159 (2%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I T A+ L P + + + + N R GP Y + L KG
Sbjct: 8 IITTAAVTAALLPAASFLMQDSQIAYADSVEYRVVTGDYVNFRKGPSTSYASLGQ-LNKG 66
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
VE + ++W +++ ++G G+I ++ + + K N +N+
Sbjct: 67 DKVEYISTSDSWVKVK-YNGQTGYIYAKYIAKINN--ETNTQVKYVNCSALNVRSGAGTS 123
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + + + S W T G++ + +
Sbjct: 124 YSIITTITKDTKVEVISSSKGWSKIKVGTTTGYVSSKYL 162
>gi|329900864|ref|ZP_08272613.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549337|gb|EGF33908.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
Length = 149
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 11/132 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ +I A+ A P V + +PVEV+ Y W ++RD G + W+ L
Sbjct: 26 YQSIGAAPAVLYDAPSQRGRKVFV-APRNMPVEVILTYGEWSKVRDASGDLSWVESKQLD 84
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT 175
KR I + D + ++ V+ V+L + E + W + D
Sbjct: 85 AKRHVIT--------KAAGTRVRAAADEMAPVIFSVDKSVILEMAEPSTAGWVKVRHRDG 136
Query: 176 E-GWIKKQKIWG 186
+ G++K +WG
Sbjct: 137 QGGFVKATDVWG 148
>gi|300309501|ref|YP_003773593.1| hypothetical protein Hsero_0159 [Herbaspirillum seropedicae SmR1]
gi|300072286|gb|ADJ61685.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 149
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++ A+ A P V +G+PVEVV Y W ++RD GT+ W++ L+
Sbjct: 26 FKSVGAAPAIMYDAPSEKGRRVYV-APRGMPVEVVLTYGEWSKVRDAAGTLSWVSSKALT 84
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LD 174
KR +VS N +Y D S +V + VLL + E + W +
Sbjct: 85 PKRMLVVSAAN--------ARVYNAADESSPVVFTADKSVLLEMLESPNNGWVKVRHRDG 136
Query: 175 TEGWIKKQKIWG 186
G++K +WG
Sbjct: 137 QTGFVKAGDVWG 148
>gi|320116294|ref|YP_004186453.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|319929385|gb|ADV80070.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 379
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 98 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 156
Query: 110 INKSLLS--------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ + S +P +N+ +I + ++A+V + +
Sbjct: 157 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 216
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 217 GNQNGWYNIRLSDGREGWIYGQYL 240
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 6/160 (3%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + + E + + I + N R + +++ T L
Sbjct: 8 MIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLSGSII-TRLNLN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V V+ + W +I+ DG GW+ L+ T +N+ +
Sbjct: 63 DTVTVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTGSRVNVRSAASLS 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ I+ ++ ++ + +W + + EGWI Q +
Sbjct: 123 ASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 162
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R I V+ +TK V+V+ W IR DG GWI LS
Sbjct: 186 VTGSVVNVRSAGNISANVI-AQVTKNTKVDVLGNQNGWYNIRLSDGREGWIYGQYLSVGT 244
Query: 120 SAIVSPWNRKTNNPIYI 136
IVS + + +
Sbjct: 245 QTIVSRGDVDRSVVNKL 261
>gi|300914812|ref|ZP_07132128.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307723954|ref|YP_003903705.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
gi|300889747|gb|EFK84893.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307581015|gb|ADN54414.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
Length = 379
Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 98 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 156
Query: 110 INKSLLS--------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ + S +P +N+ +I + ++A+V + +
Sbjct: 157 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 216
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 217 GNQNGWYNIRLSDGREGWIYGQYL 240
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 6/160 (3%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + + E + + I + N R + +++ T L
Sbjct: 8 MIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLSGSII-TRLNLN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V V+ + W +I+ DG GW+ L+ T +N+ +
Sbjct: 63 DTVTVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTGSRVNVRSAASLS 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ I+ ++ ++ + +W + + EGWI Q +
Sbjct: 123 ASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 162
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R I V+ +TK V+V+ W IR DG GWI LS
Sbjct: 186 VTGSVVNVRSAGNISANVI-AQVTKNTKVDVLGNQNGWYNIRLSDGREGWIYGQYLSVGT 244
Query: 120 SAIVSPWNRKTNNPIYI 136
IVS + + +
Sbjct: 245 QTIVSRGDVDRSVVNKL 261
>gi|256750985|ref|ZP_05491868.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256750095|gb|EEU63116.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 410
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 129 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 187
Query: 110 INKSLLS--------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ + S +P +N+ +I + ++A+V + +
Sbjct: 188 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 247
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 248 GNQNGWYNIRLSDGREGWIYGQYL 271
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
R++ +IF ++++ + + E + + I + N R +
Sbjct: 28 RRFAVDQRIGKMIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLS 83
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+++ T L V V+ + W +I+ DG GW+ L+ T
Sbjct: 84 GSII-TRLNLNDTVTVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTGS 142
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 143 RVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 193
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R I V+ +TK V+V+ W IR DG GWI LS
Sbjct: 217 VTGSVVNVRSAGNISANVI-AQVTKNTKVDVLGNQNGWYNIRLSDGREGWIYGQYLSVGT 275
Query: 120 SAIVSPWNRKTNNPIYI 136
IVS + + +
Sbjct: 276 QTIVSRGDVDRSVVNKL 292
>gi|168070201|ref|XP_001786728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660617|gb|EDQ48458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 289
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVE----VVKEYENWRQIRDFDGTIGWINKSLL 115
+ + N R GP + +++ T LPV+ V+ +W Q++ +G GW+ L+
Sbjct: 6 VSVDKLNVRSGPSLQDSIITT-----LPVKTVLPVLSTKNDWIQVKLPNGQSGWVANYLV 60
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ +++ + + + +N+ P +V + PG +I + +G+W
Sbjct: 61 TQQQT--PASVAQIESTTDKLNVRSGPGQTYSVVQTINPGTRYSIVQKNGDWIQIQLSGQ 118
Query: 176 E-GWIK 180
GW+
Sbjct: 119 TKGWVA 124
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 25/147 (17%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---- 116
+ N R GPG Y+VV + G +V++ +W QI+ T GW+ L+
Sbjct: 75 TTDKLNVRSGPGQTYSVV-QTINPGTRYSIVQKNGDWIQIQLSGQTKGWVASWLVKEINS 133
Query: 117 --------------GKRSAIVSPWNRKTNNPIYINL------YKKPDIQSIIVAKVEPGV 156
S P + L Y PD + + ++ G
Sbjct: 134 GGQTNTKPSPESLPAANSGTTPPAKPGAVQGASLTLEFAPYVYATPDASTPAIGQLHAGE 193
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQK 183
+T+ W WI +
Sbjct: 194 SITVLAQQNGWIQFPYDGVNAWISTDE 220
>gi|167037877|ref|YP_001665455.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166856711|gb|ABY95119.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 424
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 143 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 201
Query: 110 INKSLLS--------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ + S +P +N+ +I + ++A+V + +
Sbjct: 202 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 261
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 262 GNQNGWYNIRLSDGREGWIYGQYL 285
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
R++ +IF ++++ + + E + + I + N R +
Sbjct: 42 RRFAVDQRIGKMIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLS 97
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+++ T L V V+ + W +I+ DG GW+ L+ T
Sbjct: 98 GSII-TRLNLNDTVTVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTGS 156
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 157 RVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 207
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R I V+ +TK V+V+ W IR DG GWI LS
Sbjct: 231 VTGSVVNVRSAGNISANVI-AQVTKNTKVDVLGNQNGWYNIRLSDGREGWIYGQYLSVGT 289
Query: 120 SAIVSPWNRKTNNPIYI 136
IVS + + +
Sbjct: 290 QTIVSRGDVDRSVVNKL 306
>gi|167040774|ref|YP_001663759.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
gi|166855014|gb|ABY93423.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
Length = 424
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ P+ T+ SR N R + +++ T L K V+V+ + +W ++R + GW
Sbjct: 143 QNAPVTGVGTVTGSRVNVRSAASLSASII-TQLAKNTVVDVLGKQNDWYKVRLSNNKEGW 201
Query: 110 INKSLLS--------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
I L+ + S +P +N+ +I + ++A+V + +
Sbjct: 202 IYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDVL 261
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 262 GNQNGWYNIRLSDGREGWIYGQYL 285
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
R++ +IF ++++ + + E + + I + N R +
Sbjct: 42 RRFAVDQRIGKMIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLS 97
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+++ T L V V+ + W +I+ DG GW+ L+ T
Sbjct: 98 GSII-TRLNLNDTVTVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTGS 156
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 157 RVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 207
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R I V+ +TK V+V+ W IR DG GWI LS
Sbjct: 231 VTGSVVNVRSAGNISANVI-AQVTKNTKVDVLGNQNGWYNIRLSDGREGWIYGQYLSVGT 289
Query: 120 SAIVSPWNRKTNNPIYI 136
IVS + + +
Sbjct: 290 QTIVSRGDVDRSVVNKL 306
>gi|261420695|ref|YP_003254377.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|319768365|ref|YP_004133866.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
gi|261377152|gb|ACX79895.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|317113231|gb|ADU95723.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
Length = 448
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Query: 30 LAIYFYLAPILALSH---EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
LA+ F L + A + K E + R + A R N R GPG+ Y + +G
Sbjct: 7 LALSFCLLWLAAAAWPVGAKGEKEMEETKRLAVVTADRVNVRQGPGVPYR-PLANVHRGE 65
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V + W +I GW+ ++ K +A+V + L ++P
Sbjct: 66 VYRLVDMKDGWVKIEWEKNRTGWLAARYVALAKETAVV--------QENQLRLRQEPSRD 117
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G + + + GEW GW+ +
Sbjct: 118 GRIIGHLARGETVWVIKEDGEWTEVIADGAIGWVSSAYL 156
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 56 RFVTIKA-------SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
R+V + ++ R P ++ +L +G V V+KE W ++ DG IG
Sbjct: 92 RYVALAKETAVVQENQLRLRQEPSRDGRIIG-HLARGETVWVIKEDGEWTEVI-ADGAIG 149
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W++ + L+ R + +S N +N+ +P +++ V ++ G + I E W
Sbjct: 150 WVSSAYLTAARESSIS-HQTGIVNASSLNVRAEPSLKAARVGRLVRGEEVEIVEKKPGWY 208
Query: 169 FGYNL-DTEGWIKKQKI 184
+ +GW+ +
Sbjct: 209 KIASPTGLDGWVSSAYV 225
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I AI + + L + E I + + + AS N R P + V + G
Sbjct: 142 VIADGAIGWVSSAYLTAARESSISHQTGI-----VNASSLNVRAEPSLKAARVGRLVR-G 195
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
VE+V++ W +I G GW++ + +
Sbjct: 196 EEVEIVEKKPGWYKIASPTGLDGWVSSAYV 225
>gi|255656378|ref|ZP_05401787.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296450174|ref|ZP_06891935.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296878555|ref|ZP_06902560.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296260937|gb|EFH07771.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296430362|gb|EFH16204.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 396
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ + AI LA ++E E+ R TI + N R GPG + + L
Sbjct: 9 AASVMATAIIIPTMGNLAYANESEVESVSIESR--TITGNAVNFRKGPGTNHESMGK-LY 65
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTNNPIYIN 137
KG VE V + +W +++ ++G G+++ SL S S+ S + K +N
Sbjct: 66 KGDKVEYVGKDGSWVKVK-YNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 59 TIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++K+++ N R GP + + T L G V + E W +I +G +G+++
Sbjct: 111 SVKSTKVVTAKGLNFRTGPSTSSSKIST-LGYGTEVGYISESNGWSKIS-SNGRVGYVSS 168
Query: 113 SLLSGK----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIR 161
L S+ K +NL P +A + G + I
Sbjct: 169 KYLGTSVNDSTSENTGNSSNDIVKGTKVVTAKSLNLRTGPGTSHSKIATLSYGTEVGRIS 228
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
E +G W + G++ Q +
Sbjct: 229 E-NGGWTKVSYGNQTGYVSSQYL 250
>gi|295400753|ref|ZP_06810730.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977334|gb|EFG52935.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 479
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 17/157 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ + P+LA +E++ V + A N R GPG+ Y + + +G
Sbjct: 14 CLSMVVGMVLPVLAAKNERQT---------VVVTAKEVNVRQGPGMSYRSL-AKVHQGET 63
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++++E W +++ GW+ K + + + + + P
Sbjct: 64 YQLIEERAGWVKVQMKRNQAGWVAK-------TYTKLVLEQAVSQEDRLRVRLTPGRDGR 116
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV + G ++++ E G+W GW+ +
Sbjct: 117 IVGHLSKGEVVSVLETDGDWSKVVTSSLIGWVFSSYL 153
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + V +T G V + + ENW QI DG GW++ +S
Sbjct: 168 VTADSLNVRARPSLAAERVGK-VTYGEQVTITDKQENWDQILMNDGKTGWVSSEYIS--- 223
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + + T +N+ P ++S I A + G + G W + +G+
Sbjct: 224 TVAKTASSFVTVLYSNVNIRALPSLRSPIQAMAQYGERYRVLGKIGNWYEIELSNGAKGY 283
Query: 179 IK 180
I
Sbjct: 284 IA 285
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + K L + V+ + R R+ PG +V +L+KG V V++ +W ++
Sbjct: 87 AKTYTKLVLEQAVS-QEDRLRVRLTPGRDGRIVG-HLSKGEVVSVLETDGDWSKVVTSS- 143
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
IGW+ S LS + +N+ +P + + V KV G +TI +
Sbjct: 144 LIGWVFSSYLSSY-HRQETTTKTGWVTADSLNVRARPSLAAERVGKVTYGEQVTITDKQE 202
Query: 166 EWCFG-YNLDTEGWIKKQKI 184
W N GW+ + I
Sbjct: 203 NWDQILMNDGKTGWVSSEYI 222
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FVT+ S N R P + + G V+ + NW +I +G G+I L+S
Sbjct: 232 FVTVLYSNVNIRALPSLRSPIQ-AMAQYGERYRVLGKIGNWYEIELSNGAKGYIAGWLVS 290
Query: 117 G 117
Sbjct: 291 A 291
>gi|196250403|ref|ZP_03149095.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
gi|196210062|gb|EDY04829.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
Length = 449
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 9/163 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+++ F + + A E + E K R + R N R GPG+ Y
Sbjct: 1 MRSRRWFAILVCLCCLVTAAWPAEVKG-ENKKKERLAVVTVDRVNVRQGPGVPYR-PLAN 58
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +G ++ + W +I IGWI S + R + + L ++
Sbjct: 59 VHRGETYRLIDIKDGWLKIEWKKNKIGWIAASYAAPVREMEIV-------QEDRLRLRQE 111
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + I+ + G + + + GEW GW+ +
Sbjct: 112 PGLDGRIIGHLAQGDQVIVIKEKGEWKQIVTKKAVGWVAASYL 154
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ ++ R R PG+ ++ +L +G V V+KE W+QI +GW+
Sbjct: 94 PVREMEIVQEDRLRLRQEPGLDGRIIG-HLAQGDQVIVIKEKGEWKQIV-TKKAVGWVAA 151
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GY 171
S L+ S +N+ P + + + ++ G + I E +W
Sbjct: 152 SYLADAESP-TGSRQTGVVTADSLNVRVAPSLDAERIGRLLHGERVEIVETKRDWYKIVT 210
Query: 172 NLDTEGWIKKQKI 184
GW+ + +
Sbjct: 211 RSGLGGWVAAEYV 223
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ + A LA + + + + A N R+ P + + L G VE+
Sbjct: 145 AVGWVAASYLADAESPTGSRQTGV-----VTADSLNVRVAPSLDAERIGRLLH-GERVEI 198
Query: 91 VKEYENWRQIRDFDGTIGWINKSLL 115
V+ +W +I G GW+ +
Sbjct: 199 VETKRDWYKIVTRSGLGGWVAAEYV 223
>gi|226941754|ref|YP_002796828.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
gi|226716681|gb|ACO75819.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
Length = 147
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F ++K + PG + +++ PVEV+ NW ++RD G I W++ + L
Sbjct: 23 EFRSVKETGTLLYDAPGGQGKKLFV-VSRAYPVEVLARQGNWARVRDATGGIAWVDYARL 81
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLD 174
S +R+ IV+ + ++ PD + + V+L + E W + D
Sbjct: 82 SPQRTVIVTAAD--------ASVRTAPDTGAPVSFHAARDVVLDLVEPPKSGWAKVRHAD 133
Query: 175 TE-GWIKKQKIWGI 187
G++ +WG+
Sbjct: 134 GSGGYLPLAALWGL 147
>gi|164687226|ref|ZP_02211254.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
gi|164603650|gb|EDQ97115.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
Length = 305
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 10/158 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+A + PI S + + + SR N R GP + Y++ L KG
Sbjct: 12 ALVATSSIVMPIAETSQVEAATQTVTV-------TSRVNFRKGPSMNYSI-MRKLYKGYK 63
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSG-KRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + NW +++ +DGT G++ K +SG S+ R N + +N+ K P
Sbjct: 64 LTYLGKNGNWIKVK-YDGTTGYVYKDYVSGYSSSSDNKGITRYVNASVGLNVRKGPSTSY 122
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+ G + + S W ++K +
Sbjct: 123 SKLGKLSYGKSVKVLSTSNGWSKISYNGRTAYVKSTYL 160
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ V + +N K P + I+ K+ G LT +G W T G++
Sbjct: 26 TSQVEAATQTVTVTSRVNFRKGPSMNYSIMRKLYKGYKLTYLGKNGNWIKVKYDGTTGYV 85
Query: 180 KKQKIWG 186
K + G
Sbjct: 86 YKDYVSG 92
>gi|312112570|ref|YP_003990886.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
gi|311217671|gb|ADP76275.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
Length = 479
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 17/157 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ + P+LA +E++ V + A N R GPG+ Y + + +G
Sbjct: 14 CLPMVVGMVLPVLAAKNERQT---------VVVTAKEVNVRQGPGMSYRSL-AKIHQGET 63
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++++E W +++ GW+ K + + + + + P
Sbjct: 64 YQLIEERAGWVKVQMKRNQAGWVAK-------TYTKFVLEQAVSQEDRLRVRLTPGRDGR 116
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV + G ++++ E G+W GW+ +
Sbjct: 117 IVGHLSKGEVVSVLETDGDWSKVVTSSLIGWVFSSYL 153
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + V +T G V + + ENW QI DG GW++ +S
Sbjct: 168 VTADSLNVRARPSLAAERVGK-VTYGEQVTITDKQENWDQILMNDGKTGWVSSEYIS--- 223
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + + T +N+ P ++S I A + G + G W + +G+
Sbjct: 224 TVAKTASSFVTVLYSNVNIRALPSLRSPIQAMAQYGERYRVLGKIGNWYEIELSNGAKGY 283
Query: 179 IK 180
I
Sbjct: 284 IA 285
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FVT+ S N R P + + G V+ + NW +I +G G+I L+S
Sbjct: 232 FVTVLYSNVNIRALPSLRSPIQ-AMAQYGERYRVLGKIGNWYEIELSNGAKGYIAGWLVS 290
Query: 117 G 117
Sbjct: 291 A 291
>gi|157693162|ref|YP_001487624.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
gi|157681920|gb|ABV63064.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
Length = 502
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 12/140 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
+ N R GPG+ Y + + +G ++ + W QI +G GW+ L+
Sbjct: 11 AVVATDEINVRSGPGLSYGIAAV-VKRGESYPILTKQGEWVQIGLSNGQKGWVVSWLITT 69
Query: 116 ---------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
S ++ S + T+ + + P +V G + SGE
Sbjct: 70 SSGSQKAAKSKTQNQSSSGSSSITSTATDLRIRTGPGTSYQVVGTFPQGASAKKLQTSGE 129
Query: 167 WCFGYNLDTEGWIKKQKIWG 186
W GW+ + G
Sbjct: 130 WTKISYKQAVGWVHSDYVSG 149
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
R GPG Y VV T+ +G + ++ W +I + +GW++ +SG + A S
Sbjct: 100 RIRTGPGTSYQVVGTF-PQGASAKKLQTSGEWTKIS-YKQAVGWVHSDYVSGGQKASQSS 157
Query: 126 -------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
T +N+ + + IVA + +TI W +GW
Sbjct: 158 SGESSRSKQTGTVGVSSLNVRQSAAPNAQIVASLARNTQVTILREQNGWYEIEAKGVKGW 217
Query: 179 IK 180
Sbjct: 218 AA 219
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 12/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN------- 111
T+ S N R +V L + V +++E W +I G GW
Sbjct: 169 TVGVSSLNVRQSAAPNAQIV-ASLARNTQVTILREQNGWYEIE-AKGVKGWAASYYIVTS 226
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S K S+ + + N+ K + I + G I G+W
Sbjct: 227 NGASSAGEKNSSSSTSQKKAYIVYDGTNIRKSASTSAQIAERATKGAAYQIVRTQGDWYE 286
Query: 170 GY-NLDTEGWIK 180
+ G++
Sbjct: 287 VTLSNGGTGYVA 298
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A Y+ + A S ++ + I N R + TKG ++
Sbjct: 219 ASYYIVTSNGASSAGEKNSSSSTSQKKAYIVYDGTNIRKSASTSAQIA-ERATKGAAYQI 277
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
V+ +W ++ +G G++ ++ +++ +P ++ ++ +L
Sbjct: 278 VRTQGDWYEVTLSNGGTGYVASWVVQTNKNSSEAPRPQQDSSSGTGSL 325
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+ ++ IN+ P + I A V+ G I GEW + +GW+
Sbjct: 5 TAQTDQAVVATDEINVRSGPGLSYGIAAVVKRGESYPILTKQGEWVQIGLSNGQKGWV 62
>gi|255100323|ref|ZP_05329300.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-63q42]
gi|255306261|ref|ZP_05350433.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile ATCC 43255]
Length = 607
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
++ N R G G Y V+ L KG VEV+ E W +I+ +DG +G+++ S L ++
Sbjct: 103 SNSLNMRNGAGTSYRVITV-LKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYLGDVSNS 160
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 161 -TNKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYVSS 219
Query: 182 QKI 184
+
Sbjct: 220 MYL 222
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 11/159 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
LA L + +H + + N R P ++ K
Sbjct: 5 AALATLAMLPLGVVNAHADGDIGI--------VTINYLNVRNEPTAESSIAFV-AKKDDK 55
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V + W +I+ G GW + + S S S K +N+
Sbjct: 56 VLIKDSSNGWYKIKAESGQEGWASSKYIAKSNSDSLRTSTNKEKQVISNSLNMRNGAGTS 115
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ G + + S W G++ +
Sbjct: 116 YRVITVLKKGQKVEVISESNGWSKIKYDGRLGYVSSSYL 154
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP Y ++ L KG VEV+ E W +I+ ++G +++ LS
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGK-LPKGSKVEVISESNGWSKIK-YNGKDAYVSSMYLSDVS 226
Query: 120 SAIVSPWNRKTNNPIY--------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ + +N+ P + KV G +T+ S W
Sbjct: 227 QSNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKIN 286
Query: 172 NLDTEGWI 179
+ E ++
Sbjct: 287 FNNKEAFV 294
>gi|126698902|ref|YP_001087799.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile 630]
gi|55668683|gb|AAV54288.1| Acd [Clostridium difficile 630]
gi|115250339|emb|CAJ68161.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium
difficile]
Length = 607
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
++ N R G G Y V+ L KG VEV+ E W +I+ +DG +G+++ S L ++
Sbjct: 103 SNSLNMRNGAGTSYRVITV-LKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYLGDVSNS 160
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 161 -TNKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYVSS 219
Query: 182 QKI 184
+
Sbjct: 220 MYL 222
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 11/159 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
LA L + +H + + N R P ++ K
Sbjct: 5 AALATLAMLPLGVVNAHADGDIGI--------VTINYLNVRNEPTAESSIAFV-AKKDDK 55
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V + W +I+ G GW + + S S S K +N+
Sbjct: 56 VLIKDSSNGWYKIKAESGQEGWASSKYIAKSNSDSLRTSTNKEKQVISNSLNMRNGAGTS 115
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ G + + S W G++ +
Sbjct: 116 YRVITVLKKGQKVEVISESNGWSKIKYDGRLGYVSSSYL 154
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP Y ++ L KG VEV+ E W +I+ ++G +++ LS
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGK-LPKGSKVEVISESNGWSKIK-YNGKDAYVSSMYLSDVS 226
Query: 120 SAIVSPWNRKTNNPIY--------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ + +N+ P + KV G +T+ S W
Sbjct: 227 QSNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKIN 286
Query: 172 NLDTEGWI 179
+ E ++
Sbjct: 287 FNNKEAFV 294
>gi|254974850|ref|ZP_05271322.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-66c26]
gi|255092238|ref|ZP_05321716.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CIP 107932]
gi|255313977|ref|ZP_05355560.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-76w55]
gi|255516657|ref|ZP_05384333.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-97b34]
gi|255649756|ref|ZP_05396658.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-37x79]
gi|260682912|ref|YP_003214197.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260686510|ref|YP_003217643.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
gi|260209075|emb|CBA62217.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260212526|emb|CBE03475.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
Length = 607
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
++ N R G G Y V+ L KG VEV+ E W +I+ +DG +G+++ S L ++
Sbjct: 103 SNSLNMRNGAGTSYRVITV-LKKGQKVEVISESNGWSKIK-YDGRLGYVSSSYLGDVSNS 160
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K N +N+ P+ ++ K+ G + + S W + +I
Sbjct: 161 -TNKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYISS 219
Query: 182 QKI 184
+
Sbjct: 220 MYL 222
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 11/159 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
LA L + +H + + N R P ++ K
Sbjct: 5 AALATLAMLPLGVVNAHADGDIGI--------VTINYLNVRNEPTAESSIAFV-AKKDDK 55
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V + W +I+ G GW + + S S S K +N+
Sbjct: 56 VLIKDSSNGWYKIKAESGQEGWASSKYIAKSNSDSLRTSTNKEKQVISNSLNMRNGAGTS 115
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ G + + S W G++ +
Sbjct: 116 YRVITVLKKGQKVEVISESNGWSKIKYDGRLGYVSSSYL 154
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP Y ++ L KG VEV+ E W +I+ ++G +I+ LS
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGK-LPKGSKVEVISESNGWSKIK-YNGKDAYISSMYLSDVS 226
Query: 120 SAIVSPWNRKTNNPIY--------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ + +N+ P + KV G +T+ S W
Sbjct: 227 QSNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKIN 286
Query: 172 NLDTEGWI 179
+ E ++
Sbjct: 287 FNNKEAFV 294
>gi|228990993|ref|ZP_04150956.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
gi|228768773|gb|EEM17373.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
Length = 438
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R GPG ++ + +G ++V E W ++ + +G G+++ ++
Sbjct: 66 TVTADVLNVRTGPGTGNDIISK-VQEGQVLQVTGEENGWFKV-NVNGKTGYVSSDFVTTG 123
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+A+ T N +N+ P +V V G + + +W +
Sbjct: 124 EKTGTAVQQGTGNYTVNVSSLNVRTGPSASHTVVGTVGKGQTVQVVGEVQDWFKINHNGG 183
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 184 TGYVSKDFV 192
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ S N R GP +TVV T + KG V+VV E ++W +I + +G G+++K ++
Sbjct: 138 TVNVSSLNVRTGPSASHTVVGT-VGKGQTVQVVGEVQDWFKI-NHNGGTGYVSKDFVTKG 195
Query: 117 GKRSAIVSPWNRKTNNPIYIN-------------LYKKPDIQSIIVAKVEPGVLLTIREC 163
G + + + + NN + I + P + ++ V G L +
Sbjct: 196 GTTTNVSTETEKPNNNEMTIRKDGSYVVDTGALRVRTGPATYNAVIGGVVQGQTLQVIGG 255
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 256 ENGWYKINHQGRTGYVSADHV 276
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ ++ + T +N+ P + I++KV+ G +L + W
Sbjct: 51 VTETQTVEKKSDIKYTVTADVLNVRTGPGTGNDIISKVQEGQVLQVTGEENGWFKVNVNG 110
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 111 KTGYVSSDFV 120
>gi|257093112|ref|YP_003166753.1| hypothetical protein CAP2UW1_1509 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045636|gb|ACV34824.1| protein of unknown function DUF1058 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 144
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ T+ A+ P + + + +G PVE+V E W ++RD DG++ WI L
Sbjct: 21 EYRTVDAATV-LYDAPSQKGSKLFV-IKRGTPVELVVVLEGWSKVRDADGSLAWIESKYL 78
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-L 173
+R+ IV+ + + + D + + + E V L E G W +
Sbjct: 79 GKRRTLIVTTARGQ--------IRQNADDSAPVSFEAEKNVSLDFVEVVPGGWVKVRHRD 130
Query: 174 DTEGWIKKQKIWGI 187
G+++ +IWG+
Sbjct: 131 GQSGFVRINQIWGL 144
>gi|212638573|ref|YP_002315093.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
gi|212560053|gb|ACJ33108.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
Length = 398
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 4/130 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I R N R GPG+ + V + KG VV++ W QIR GW+ +
Sbjct: 3 VRIVVDRLNVRTGPGLTFPVQ-EKVAKGKQYAVVQKRGEWLQIRLTSNRTGWVYGKYVQM 61
Query: 118 KRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + + L K P I+ V T +W +
Sbjct: 62 QNEQMEKKKQIQQLVVCQADGLRLRKGPGTTYAIIGYVNRNEKGTATVIQEDWMYVRWDG 121
Query: 175 TEGWIKKQKI 184
EGW+ + +
Sbjct: 122 KEGWVHRSYV 131
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 9/145 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+++ +KK + + V +A R GPG Y ++ Y+ + E+W +R +
Sbjct: 62 QNEQMEKKKQIQQLVVCQADGLRLRKGPGTTYAIIG-YVNRNEKGTATVIQEDWMYVR-W 119
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNP------IYINLYKKPDIQSIIVAKVEPGVL 157
DG GW+++S ++ + + N+ P QS ++ K + G
Sbjct: 120 DGKEGWVHRSYVANVEKNEQNNEQNNEQHTYVQMLYDNTNIRSAPSTQSPVITKAKQGDQ 179
Query: 158 LTIRECSGEWCFGYNLDTE-GWIKK 181
++ G+W G++ +
Sbjct: 180 FSVIRKEGQWYVIQVDAQTIGYVAE 204
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V + N R P V+ T +G V+++ W I+ TIG++ + ++
Sbjct: 150 YVQMLYDNTNIRSAPSTQSPVI-TKAKQGDQFSVIRKEGQWYVIQVDAQTIGYVAEWVV 207
>gi|138896826|ref|YP_001127279.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
gi|134268339|gb|ABO68534.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
Length = 449
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 9/163 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ F + + A E + E K R + R N R GPG+ Y
Sbjct: 1 MRPRRWFAILVCLCCLVTAAWPAEVKG-ENKKKERLAVVTVDRVNVRQGPGVPYR-PLAN 58
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +G ++ + W +I IGWI S + R + + L ++
Sbjct: 59 VHRGETYRLIDIKDGWLKIEWKKNKIGWIAASYAAPVREMEIV-------QEDRLRLRQE 111
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + I+ + G + + + GEW GW+ +
Sbjct: 112 PGLDGRIIGHLAQGDQVIVIKEKGEWKQIVTKKAVGWVAASYL 154
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ ++ R R PG+ ++ +L +G V V+KE W+QI +GW+
Sbjct: 94 PVREMEIVQEDRLRLRQEPGLDGRIIG-HLAQGDQVIVIKEKGEWKQIV-TKKAVGWVAA 151
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GY 171
S L+ S +N+ P + + + ++ G + I E +W
Sbjct: 152 SYLADAESP-TGSRQTGVVTADSLNVRVAPSLDAERIGRLLHGERVEIVETKRDWYKIVT 210
Query: 172 NLDTEGWIKKQKI 184
GW+ + I
Sbjct: 211 RSGLGGWVAAEYI 223
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ + A LA + + + + A N R+ P + + L G VE+
Sbjct: 145 AVGWVAASYLADAESPTGSRQTGV-----VTADSLNVRVAPSLDAERIGRLLH-GERVEI 198
Query: 91 VKEYENWRQIRDFDGTIGWINK 112
V+ +W +I G GW+
Sbjct: 199 VETKRDWYKIVTRSGLGGWVAA 220
>gi|325982746|ref|YP_004295148.1| hypothetical protein NAL212_2154 [Nitrosomonas sp. AL212]
gi|325532265|gb|ADZ26986.1| protein of unknown function DUF1058 [Nitrosomonas sp. AL212]
Length = 160
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F +I + P + + + LPVEVV + E W ++RD G++ W+ K L
Sbjct: 36 EFFSIAENAIVMYDAPSLQADKLFV-AGRHLPVEVVVDVEGWAKVRDSSGSLAWVQKKDL 94
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-L 173
S +R IV ++++ DI+S ++ +VE +++ W +
Sbjct: 95 SQQRYVIVIVP--------LADVHQSADIKSELIFQVEENIVMEWMPSDIQGWVKVRHRD 146
Query: 174 DTEGWIKKQKIWG 186
G+IK ++WG
Sbjct: 147 GQTGYIKVNQVWG 159
>gi|164688525|ref|ZP_02212553.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
gi|164602938|gb|EDQ96403.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
Length = 539
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 48/125 (38%), Gaps = 6/125 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I AS N+R G Y++ L KG V ++ W +I + GW++ + +
Sbjct: 15 ITASSLNARSGASTSYSIKFV-LHKGDKVNIITFSNGWYKITTDNNKTGWVSSKYVEVQN 73
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + K + +N+ K P ++ + G + + W + G++
Sbjct: 74 TTTI-----KYVSASSLNMRKGPSTSYSVITTLTKGEEVEVISEENGWAKINHNSKIGYV 128
Query: 180 KKQKI 184
+ +
Sbjct: 129 SSKYL 133
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++V+ AS N R GP Y+V+ T LTKG VEV+ E W +I + + IG+++ L
Sbjct: 78 KYVS--ASSLNMRKGPSTSYSVITT-LTKGEEVEVISEENGWAKI-NHNSKIGYVSSKYL 133
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S ++ ++ K N +N+ + I+ G + + G W D
Sbjct: 134 SDEKPVKITI---KYVNVDSLNIREGAGTSYKILGTYNHGDEVKVVSIDGNWAKIQYKDG 190
Query: 176 EGWIKKQKI 184
+I + +
Sbjct: 191 YAYISNKYL 199
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R G G Y ++ TY G V+VV NW +I+ DG +I+ LS ++
Sbjct: 146 VNVDSLNIREGAGTSYKILGTYNH-GDEVKVVSIDGNWAKIQYKDG-YAYISNKYLSDEK 203
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V+ K +N+ + I+ + G + + G+W D +I
Sbjct: 204 PVKVTI---KYVKADTLNIREGAGTSYKILGTYKKGQEVKVVSIDGDWAKIQYEDGYAYI 260
Query: 180 KKQKI 184
+ +
Sbjct: 261 SNKYL 265
>gi|297531482|ref|YP_003672757.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
gi|297254734|gb|ADI28180.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
Length = 448
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 13/159 (8%)
Query: 30 LAIYFYLAPILALSH---EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
LA+ F L + A + K E + R + A R N R GPG+ Y + +G
Sbjct: 7 LALSFCLLWLAAAAWPVGAKGEKEMEETKRLAVVTADRVNVRQGPGVPYR-PLANVHRGE 65
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V + W +I GW+ ++ K +A+V + L ++P
Sbjct: 66 VYRLVDMKDGWVKIEWEKNRTGWLAARYVALAKETAVV--------QENQLRLRQEPSRD 117
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G + + G W D GW +
Sbjct: 118 GRIIGHLAQGETVFVIGEEGGWKQVVTEDAIGWAAASYL 156
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 56 RFVTIKA-------SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
R+V + ++ R P ++ +L +G V V+ E W+Q+ + IG
Sbjct: 92 RYVALAKETAVVQENQLRLRQEPSRDGRIIG-HLAQGETVFVIGEEGGWKQVV-TEDAIG 149
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W S L+ A T +N+ +P + ++ + ++ G + I E W
Sbjct: 150 WAAASYLAPAE-ARSISQQTGTVAADLLNVRAEPSLHALRIGRLVRGEEVEIVEKKPGWY 208
Query: 169 FGYNL-DTEGWIKKQKI 184
+ +GW+ +
Sbjct: 209 KIASPTGLDGWVSSAYV 225
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI + A LA + + I ++ T+ A N R P + + + L +G VE+
Sbjct: 147 AIGWAAASYLAPAEARSISQQTG-----TVAADLLNVRAEPSL-HALRIGRLVRGEEVEI 200
Query: 91 VKEYENWRQIRDFDGTIGWINKSLL 115
V++ W +I G GW++ + +
Sbjct: 201 VEKKPGWYKIASPTGLDGWVSSAYV 225
>gi|169831665|ref|YP_001717647.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638509|gb|ACA60015.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulforudis
audaxviator MP104C]
Length = 751
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 18/165 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ +A++ +L LA + + + N R G G + VV +G
Sbjct: 18 RLVLVAVFLFLVIGLAGRSVEAS-------QMAVVTNPTVNLRGGAGTNHPVVGQ-AGQG 69
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSL---------LSGKRSAIVSPWNRKTNNPIYI 136
+ V+ + +W Q+R +G W+ L ++ + A + +
Sbjct: 70 ARLPVLGKSGDWVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAV 129
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
NL +V + G L + SG+W W+
Sbjct: 130 NLRGGAGTNHPVVGQAGQGACLPVLGKSGDWVQVRQANGQAAWVA 174
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 11/174 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ N +A + S + + N R G G +
Sbjct: 160 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAVNLRGGAGTNHP 219
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---------SGKRSAIVSPWN 127
VV +G + V+ + +W Q+R +G W+ L+ + + A +
Sbjct: 220 VVGQ-AGQGARLPVLGKSGDWVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQ 278
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+NL +V + G L + SG+W W+
Sbjct: 279 VAVVTTGAVNLRGGAGTNHPVVGQAGQGARLPVLGKSGDWVQVRQANGQAAWVA 332
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 11/174 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ N +A + S + + N R G G +
Sbjct: 81 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAVNLRGGAGTNHP 140
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---------SGKRSAIVSPWN 127
VV +G + V+ + +W Q+R +G W+ L+ + + A +
Sbjct: 141 VVGQ-AGQGACLPVLGKSGDWVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQ 199
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+NL +V + G L + SG+W W+
Sbjct: 200 VAVVTTGAVNLRGGAGTNHPVVGQAGQGARLPVLGKSGDWVQVRQANGQAAWVA 253
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 28/195 (14%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ N +A + S + + N R G G +
Sbjct: 239 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAVNLRGGAGTNHP 298
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS----------GKRSAIVSPW 126
VV +G + V+ + +W Q+R +G W+ L+ + + + +P
Sbjct: 299 VVGQ-AGQGARLPVLGKSGDWVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPTPVTAPG 357
Query: 127 NRKTNNPIYINL----------------YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + +P Q +A+ G L + G W
Sbjct: 358 SVNPTDPPDRTVRALVGNAVVDVEAVDVRSQPGRQYTAIAQATRGFRLPLVAERGGWYQI 417
Query: 171 YN-LDTEGWIKKQKI 184
GW++ +
Sbjct: 418 RLPNGNLGWVESATV 432
>gi|164688751|ref|ZP_02212779.1| hypothetical protein CLOBAR_02398 [Clostridium bartlettii DSM
16795]
gi|164602227|gb|EDQ95692.1| hypothetical protein CLOBAR_02398 [Clostridium bartlettii DSM
16795]
Length = 382
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 9/163 (5%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +I + + P++ SH + T+ AS N R GP Y+++ +
Sbjct: 5 KKYIIASAMMASVALPLMNASHVDAATD------MRTVTASSLNFRTGPSTSYSIINVLM 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIYINLYKK 141
G VE + +W +++ ++G G+++ ++ G + + + + +N+
Sbjct: 59 N-GQKVEYISTSGSWLKVK-YNGVTGYVHGDYVTKGTTDNSTTGTTKYVSASVGLNVRSG 116
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+E +T+ S W G++ +
Sbjct: 117 AGTSYSKLGKLEYKEKVTVLSTSNGWSKINYNGKTGYVDSSYL 159
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 15/139 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVC--TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
++V+ + N R G G Y+ + Y K V V+ W +I +++G G+++ S
Sbjct: 103 KYVS-ASVGLNVRSGAGTSYSKLGKLEYKEK---VTVLSTSNGWSKI-NYNGKTGYVDSS 157
Query: 114 LLSGK--------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L + + + N +N+ + K+E +T+ S
Sbjct: 158 YLKSTVPGSTNDNTNNETTGTTKYVNTTSGLNVRSGAGTSYSKLGKLEYKEKVTVLSTSN 217
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 218 GWSKINYNGKTGYVDSSYL 236
>gi|295398028|ref|ZP_06808084.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus viridans ATCC 11563]
gi|294973786|gb|EFG49557.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus viridans ATCC 11563]
Length = 451
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 6/162 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
QN +++ L + F + S + + K + + + N R GPGI Y +
Sbjct: 11 QNKVVYLLYLIFVTGIVGFSSLQLYQYNKA---SYKELSTNVVNLREGPGITYDIKDQLD 67
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
P ++++ NW + + +GWI L + I S T I +Y++
Sbjct: 68 GSN-PYRILRQENNWYYVLLDNNEVGWIPTWLADNQD--IDSSDFIATTLIDDIQIYEEN 124
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ E I + W GW+K+ +I
Sbjct: 125 SEDATVLTSAEKNSKYQILHQADGWAQIQLSGEIGWVKQTEI 166
>gi|228995067|ref|ZP_04154817.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
gi|228764693|gb|EEM13492.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
Length = 570
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 13/161 (8%)
Query: 38 PILALSHEKEIFEKKPLPRFV----------TIKASRANSRIGPGIMYTVVCTYLTKGLP 87
P L +KP + V T+ A + R G + ++ + +G
Sbjct: 19 PTLDSVQAAPENTQKPATQTVQAAPQNNSNYTVTADVLHVRSGASTSHDIISR-VYEGQT 77
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQS 146
+ V+ E W +I + +G G+++ +S + VS + + + P+ S
Sbjct: 78 LNVIGEENGWVKI-NHNGKTGYVSGQFVSKNGTTPNVSTGGKNKVTADVLRVRTSPNTSS 136
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
I+ +V G L + W + G++ Q I GI
Sbjct: 137 SIMGRVYEGQTLQVISIENGWVKINHNGKTGYVSGQFISGI 177
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 39/132 (29%), Gaps = 14/132 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R GP + V+ L G + V W +I + G G+++ + +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVLN-GQTLNVTGVENGWYKI-NHHGKTGYVSSEFVKFVK 341
Query: 120 SAIVSPWNRKTN------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+P N +N+ ++ + G + + W
Sbjct: 342 GGTTTPEQPNQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGW 401
Query: 168 CFGYNLDTEGWI 179
G++
Sbjct: 402 SKINYNGRTGYV 413
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +++ + +G ++V+ W +I + +G G+++ +SG
Sbjct: 121 VTADVLRVRTSPNTSSSIMGR-VYEGQTLQVISIENGWVKI-NHNGKTGYVSGQFISGIS 178
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + T N + + P ++ V G ++ + +W
Sbjct: 179 SNAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVQVVGEVQDWFKIN 238
Query: 172 NLDTEGWIKKQKI 184
++ K +
Sbjct: 239 YAGQTAYLSKDYV 251
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + + KG V+VV E ++W +I ++ G +++K ++
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGS-VHKGQVVQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 254
Query: 118 ----------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ V N + + P ++ V G L +
Sbjct: 255 GSSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVT 314
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 315 GVENGWYKINHHGKTGYVSSEFV 337
>gi|307266785|ref|ZP_07548309.1| NLP/P60 protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918178|gb|EFN48428.1| NLP/P60 protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 307
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 12/166 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + + E + + I + N R + +V+ L
Sbjct: 8 MIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLSGSVI-ARLNGN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN------NPIYINLY 139
V V+ + W +I+ DG GW+ LS + S+ VS + + Y+N+
Sbjct: 63 DTVTVLDKENGWYKIKLSDGREGWVFGEYLSVRNSSNVSRGDSEKAASVGIVTGSYVNVR 122
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + +VA+++ + + W + EGWI + +
Sbjct: 123 SEAGLSGSVVAQLDKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYL 168
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R G+ +VV L K V V+ + W +I+ DG GWI L+ +
Sbjct: 114 VTGSYVNVRSEAGLSGSVV-AQLDKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYLAVRS 172
Query: 120 SAIVSPWNRKTN 131
S+ +S +
Sbjct: 173 SSSISRGEVDRS 184
>gi|228999976|ref|ZP_04159548.1| Enterotoxin [Bacillus mycoides Rock3-17]
gi|228759918|gb|EEM08892.1| Enterotoxin [Bacillus mycoides Rock3-17]
Length = 571
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 13/161 (8%)
Query: 38 PILALSHEKEIFEKKPLPRFV----------TIKASRANSRIGPGIMYTVVCTYLTKGLP 87
P L +KP + V T+ A + R G + ++ + +G
Sbjct: 19 PTLDSVQAAPENTQKPATQTVQAAPQNNSNYTVTADVLHVRSGASTSHDIISR-VYEGQT 77
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQS 146
+ V+ E W +I + +G G+++ +S + VS + + + P+ S
Sbjct: 78 LNVIGEENGWVKI-NHNGKTGYVSGQFVSKNGTTPNVSTGGKNKVTADVLRVRTSPNTSS 136
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
I+ +V G L + W + G++ Q I GI
Sbjct: 137 SIMGRVYEGQTLQVISIENGWVKINHNGKTGYVSGQFISGI 177
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R GP + V+ L G + V W +I + G G+++ + +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVLN-GQTLNVTGVENGWYKI-NHHGKTGYVSSEFVKFVK 341
Query: 120 SAIVSPWNRKTN------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+P K N +N+ ++ + G + + W
Sbjct: 342 GGTTTPEQPKQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGW 401
Query: 168 CFGYNLDTEGWI 179
G++
Sbjct: 402 SKINYNGRTGYV 413
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +++ + +G ++V+ W +I + +G G+++ +SG
Sbjct: 121 VTADVLRVRTSPNTSSSIMGR-VYEGQTLQVISIENGWVKI-NHNGKTGYVSGQFISGIS 178
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + T N + + P ++ V G ++ + +W
Sbjct: 179 SNAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVQVVGEVQDWFKIN 238
Query: 172 NLDTEGWIKKQKI 184
++ K +
Sbjct: 239 YAGQTAYLSKDYV 251
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + + KG V+VV E ++W +I ++ G +++K ++
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGS-VHKGQVVQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 254
Query: 118 ----------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ V N + + P ++ V G L +
Sbjct: 255 GSSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVT 314
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 315 GVENGWYKINHHGKTGYVSSEFV 337
>gi|239828486|ref|YP_002951110.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
gi|239808779|gb|ACS25844.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
Length = 474
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S +F + + LA + + A + N R GPG +Y VV +
Sbjct: 1 MRSFVFLICMTVILAALPTSQAMAAKQT-------AVVTAKQVNVRQGPGTLYHVVMK-V 52
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G VV+E W Q+ GW+ + ++ R + + + P
Sbjct: 53 DQGETYRVVREKAGWVQLEIKQNQTGWVAQQYIAYVR-------KQAMATEDRLRVRTVP 105
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +V + G + + E +W GW+ +
Sbjct: 106 SLNGKVVGYLSQGQAVEVIEKENDWEKVVTPSFIGWVSSAYL 147
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R R P + VV YL++G VEV+++ +W ++ IGW++ + L+
Sbjct: 97 DRLRVRTVPSLNGKVVG-YLSQGQAVEVIEKENDWEKVVTPS-FIGWVSSAYLTSNDDKK 154
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKK 181
S +N+ +P +Q+ V KV G + I G+W + + GW+
Sbjct: 155 TSMRQTGWVTADSLNVRARPSLQAERVEKVTYGQQVQIMFKQGQWYQIATENGKIGWVSS 214
Query: 182 QKI 184
+ I
Sbjct: 215 EYI 217
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 9/125 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + V +T G V+++ + W QI +G IGW++ ++
Sbjct: 163 VTADSLNVRARPSLQAERV-EKVTYGQQVQIMFKQGQWYQIATENGKIGWVSSEYIAA-- 219
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD----- 174
+ +N+ P + I + G + G W
Sbjct: 220 -VSPTASQWVKVLYNDVNIRSAPSLDGNIKTTAQYGERYRVLGKIGNWYEIEIPGRGIGY 278
Query: 175 TEGWI 179
GW+
Sbjct: 279 IAGWL 283
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++V + + N R P + + T G V+ + NW +I IG+I L+
Sbjct: 226 QWVKVLYNDVNIRSAPSLDGNIKTT-AQYGERYRVLGKIGNWYEIEIPGRGIGYIAGWLV 284
Query: 116 SG 117
S
Sbjct: 285 SA 286
>gi|229009372|ref|ZP_04166637.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228751887|gb|EEM01649.1| Enterotoxin [Bacillus mycoides Rock1-4]
Length = 571
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 13/161 (8%)
Query: 38 PILALSHEKEIFEKKPLPRFV----------TIKASRANSRIGPGIMYTVVCTYLTKGLP 87
P L +KP + V T+ A + R G + ++ + +G
Sbjct: 19 PTLDSVQAAPENTQKPATQTVQAAPQNNSNYTVTADVLHVRSGASTSHDIISR-VYEGQT 77
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQS 146
+ V+ E W +I + +G G+++ +S + VS + + + P+ S
Sbjct: 78 LNVIGEENGWVKI-NHNGKTGYVSGQFVSKNGTTPNVSTGGKNKVTADVLRVRTSPNTSS 136
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
I+ +V G L + W + G++ Q I GI
Sbjct: 137 SIMGRVYEGQTLQVISIENGWVKINHNGKTGYVSGQFISGI 177
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + + KG V VV E ++W +I ++ G +++K ++
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGS-VHKGQVVHVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 254
Query: 118 ----------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ V N + + P ++ V G L +
Sbjct: 255 GSSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVT 314
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 315 GVENGWYKINHHGKTGYVSSEFV 337
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +++ + +G ++V+ W +I + +G G+++ +SG
Sbjct: 121 VTADVLRVRTSPNTSSSIMGR-VYEGQTLQVISIENGWVKI-NHNGKTGYVSGQFISGIS 178
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + T N + + P ++ V G ++ + +W
Sbjct: 179 SNAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVHVVGEVQDWFKIN 238
Query: 172 NLDTEGWIKKQKI 184
++ K +
Sbjct: 239 YAGQTAYLSKDYV 251
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R GP + V+ L G + V W +I + G G+++ + +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVLN-GQTLNVTGVENGWYKI-NHHGKTGYVSSEFVKFVK 341
Query: 120 SAIVSPWNRKTN------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+P K N +N+ ++ + G + + W
Sbjct: 342 GGTTTPEQPKQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGW 401
Query: 168 CFGYNLDTEGWI 179
G++
Sbjct: 402 SKINYNGRTGYV 413
>gi|289423517|ref|ZP_06425318.1| N-acetylglucosaminidase [Peptostreptococcus anaerobius 653-L]
gi|289156019|gb|EFD04683.1| N-acetylglucosaminidase [Peptostreptococcus anaerobius 653-L]
Length = 502
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
L P L ++ E I N R P + V L +G V +++E
Sbjct: 10 LALIPALGMNANAEASVGH-------INFEFVNIRTNPSMDDRVSFV-LKRGAEVTILEE 61
Query: 94 YENWRQIRDFDGTIGWINK-SLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDIQSII 148
+ W I+ GW+ S++ G+ + V ++K N +NL + S I
Sbjct: 62 KDGWSHIK-SGNHEGWVQSNSIIKGEDNNNVKLNSNVGSQKMINNPTLNLRQGATTSSKI 120
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+A ++ G ++ + E WC G++ + +
Sbjct: 121 IAVLKKGDIVRLLEDRVGWCKVDFNGKVGYLSSRYL 156
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
I N R G ++ L KG V ++++ W ++ DF+G +G+++ LS
Sbjct: 103 INNPTLNLRQGATTSSKIIAV-LKKGDIVRLLEDRVGWCKV-DFNGKVGYLSSRYLSDVN 160
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ + T +N+ ++ S + + G + + W G
Sbjct: 161 ANTSSIPAKTIMTVTSNQLNVRREAKATSAKLMTIYKGDEVVFEANTNGWAKITKDGKTG 220
Query: 178 WI 179
++
Sbjct: 221 YV 222
>gi|134096127|ref|YP_001101202.1| hypothetical protein HEAR2971 [Herminiimonas arsenicoxydans]
gi|133740030|emb|CAL63081.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 132
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F ++ A A P + +G+PVE+V W ++RD G + W+ S L
Sbjct: 8 EFKSVGAHPAVLYNAPSDRGRKIFV-APRGMPVEIVLTQNGWSKVRDAAGDLSWVETSAL 66
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-L 173
+ KR+ + + N K L+ + S +VA V+ GVLL + + W +
Sbjct: 67 TSKRNVMATTANLK--------LHAAAEETSAVVATVDKGVLLELVAPPASGWVKLKHRD 118
Query: 174 DTEGWIKKQKIWG 186
G+ K ++WG
Sbjct: 119 GPIGFAKTAEVWG 131
>gi|119899103|ref|YP_934316.1| hypothetical protein azo2813 [Azoarcus sp. BH72]
gi|119671516|emb|CAL95429.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 148
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 23/169 (13%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L +SL L+I A A + E + + P +
Sbjct: 1 MLTSSLRLALSIALAGACGAAHAIEYRSVAEPAILY------------DTPSDKGHKLYV 48
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ G PVEVV + W ++RD G + WI + L+ +R+ IV+ + +
Sbjct: 49 -IGAGTPVEVVVSLDKWVKVRDPGGALTWIERRALAERRTVIVT--------AARAAVRQ 99
Query: 141 KPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LDTEGWIKKQKIWGI 187
+P + +V + V+L + W + G+++ ++WG+
Sbjct: 100 QPAGDAPVVFEAAKDVVLEHAAAPADGWVRVRHPDGASGFVRVTEVWGL 148
>gi|254478278|ref|ZP_05091658.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035743|gb|EEB76437.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 306
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + H E + + + + N R + +V+ T L +
Sbjct: 8 IIFGVSVFGMTLIGNSFLHPVFA-EGLGVGK---VTGNYVNVRTEGSLSGSVI-TQLNQN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTNNPIYINLYK 140
V V+ + W ++R DG GW+ L + V+ + Y+N+
Sbjct: 63 EVVTVLGKQGGWYKVRLSDGREGWVFGEYLLIRSSNEASRGDVANISVGVVTGNYVNVRS 122
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + ++A++ G + + + W + EGWI + +
Sbjct: 123 EGSLSGKVLAQLNKGTKVEVLDRQNGWYKVKLSDGQEGWIYGEYL 167
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R + V+ L KG VEV+ W +++ DG GWI LS +
Sbjct: 113 VTGNYVNVRSEGSLSGKVL-AQLNKGTKVEVLDRQNGWYKVKLSDGQEGWIYGEYLSVRN 171
Query: 120 SAIVSPWNRKTNNPIYI 136
SA VS + + +
Sbjct: 172 SANVSRGDVDRSIVDRL 188
>gi|187250675|ref|YP_001875157.1| hypothetical protein Emin_0258 [Elusimicrobium minutum Pei191]
gi|186970835|gb|ACC97820.1| Uncharacterized protein conserved in bacteria DUF1058
[Elusimicrobium minutum Pei191]
Length = 157
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 19/137 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLS 116
T+ + AN R G V K P++++ + + W Q++DF+G GWI+ +LLS
Sbjct: 24 TVSSYEANIRSCAGTKCAVKWK-AWKYTPLQMIGLSKDKVWVQVKDFEGHTGWIHNTLLS 82
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG------ 170
+ +N+ + P + IV VE G L +G W
Sbjct: 83 ---------TQIGLSATSDVNIRQSPSSNAPIVCTVEKGYALKFISKNGGWYQVQDEPAD 133
Query: 171 YNLDT-EGWIKKQKIWG 186
N +GW+ +WG
Sbjct: 134 KNKGICKGWVYSAYVWG 150
>gi|326392062|ref|ZP_08213553.1| NLP/P60 protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991896|gb|EGD50397.1| NLP/P60 protein [Thermoanaerobacter ethanolicus JW 200]
Length = 307
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 12/166 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + + E + + I + N R + +V+ L
Sbjct: 8 MIFGISVFGATLIGSSFLNPAFA-EGLGVGK---ITGNYVNVRTQGSLSGSVI-ARLNWN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN------NPIYINLY 139
V V+ + W +I+ DG GW+ LS + S+ VS + + Y+N+
Sbjct: 63 DTVTVLDKENGWYKIKLSDGREGWVFGEYLSVRNSSNVSRGDSEKAASVGIVTGSYVNVR 122
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + +VA++ + + W + EGWI + +
Sbjct: 123 SEAGLSGSVVAQLNKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYL 168
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R G+ +VV L K V V+ + W +I+ DG GWI L+ +
Sbjct: 114 VTGSYVNVRSEAGLSGSVV-AQLNKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYLAVRS 172
Query: 120 SAIVSPWNRKTN 131
S+ +S +
Sbjct: 173 SSSISRGEVDRS 184
>gi|229084945|ref|ZP_04217197.1| Enterotoxin [Bacillus cereus Rock3-44]
gi|228698261|gb|EEL50994.1| Enterotoxin [Bacillus cereus Rock3-44]
Length = 434
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + ++ +T+G ++V + W ++ +G G+++ ++
Sbjct: 64 TVTADVLNVRTGAGTEHNIISK-VTEGQVLQVTGQENGWFKVS-VNGQTGYVSGDFVTTG 121
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K +A+ T N +N+ P ++ V G + + +W +
Sbjct: 122 GKKETAVQQGTGNYTVNVSSLNVRTGPSASHTVLGSVNKGQTVQVVGEVQDWFKINHNGG 181
Query: 176 EGWIKKQKI 184
G+I K +
Sbjct: 182 TGYISKDFV 190
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 16/140 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I + +G G+I+K ++
Sbjct: 136 TVNVSSLNVRTGPSASHTVLGS-VNKGQTVQVVGEVQDWFKI-NHNGGTGYISKDFVTKG 193
Query: 119 RSAIVSPWNRKTNNPIY--------------INLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+A+ + + N + + P + ++ V G L +
Sbjct: 194 GTAVSNQTEKPATNNNATIQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTTLQVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADYV 273
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 23/67 (34%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ + + T +N+ + I++KV G +L + W G
Sbjct: 52 TKAVETNSELKYTVTADVLNVRTGAGTEHNIISKVTEGQVLQVTGQENGWFKVSVNGQTG 111
Query: 178 WIKKQKI 184
++ +
Sbjct: 112 YVSGDFV 118
>gi|224826225|ref|ZP_03699327.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
gi|224601326|gb|EEG07507.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
Length = 148
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ SL+ +L + A LA + E F ++K + P + +
Sbjct: 1 MKKSLVVSLLLAAGFAAPLAKALE-----------FRSVKETGVALYEAPALNAKKLFV- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+++ PVEV+ + W ++RD G I WI + LS +R +V + +
Sbjct: 49 VSRYYPVEVLTSQKEWSRVRDATGGIAWIPVAALSTQRMLLVVV--------DKSEVRAE 100
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGI 187
D S + V GVL + W + +EG+ + +WG+
Sbjct: 101 ADAASPLRFSVPRDGVLELLEPPKAGWVKVRHRDGSEGYARITDLWGL 148
>gi|159900897|ref|YP_001547144.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893936|gb|ABX07016.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 556
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 13/159 (8%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
++ + + P + I N R GPG Y + L V ++ Y+ W
Sbjct: 228 SVIDALPDAQNIPTPPPAKVGKITQDNLNLRDGPGTDY-ISMKKLGIDSQVSLLARYQGW 286
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAI-----------VSPWNRKTNNPIYINLYKKPDIQS 146
QI +G +GW++ L+ + +P INL P +
Sbjct: 287 YQIETGEGNVGWVSAEFLNLEAGVAERIAEAESIPSANPDLVGWATDEGINLRSGPSTKF 346
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ K+ G LT+ EW T+GWI + +
Sbjct: 347 DSLGKLSKGAELTLLARYKEWVKVQTAKGTKGWISQDLV 385
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A AN R GP + + L G V VV + +W Q+R G GW+ LL ++
Sbjct: 169 VSADIANLRNGPSTEFDRL-DKLEPGTKVTVVARHADWVQVRTEGGQEGWLAADLLDLEQ 227
Query: 120 SAI-----------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
S I P +NL P I + K+ +++ W
Sbjct: 228 SVIDALPDAQNIPTPPPAKVGKITQDNLNLRDGPGTDYISMKKLGIDSQVSLLARYQGWY 287
Query: 169 FGYNL-DTEGWIKKQKI 184
GW+ + +
Sbjct: 288 QIETGEGNVGWVSAEFL 304
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVE 89
A + L +A + P V N R GP + + L+KG +
Sbjct: 301 AEFLNLEAGVAERIAEAESIPSANPDLVGWATDEGINLRSGPSTKFDSLGK-LSKGAELT 359
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLS 116
++ Y+ W +++ GT GWI++ L+
Sbjct: 360 LLARYKEWVKVQTAKGTKGWISQDLVD 386
>gi|228997080|ref|ZP_04156711.1| Enterotoxin [Bacillus mycoides Rock3-17]
gi|229004735|ref|ZP_04162471.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228756528|gb|EEM05837.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228762705|gb|EEM11621.1| Enterotoxin [Bacillus mycoides Rock3-17]
Length = 440
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 6/149 (4%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ + E + EKK ++ T+ A N R PG ++ + +G ++V E W
Sbjct: 49 VDSKVTETQTVEKKSDIKY-TVTADVLNVRTAPGTGNDIISK-VQEGQVLQVTGEENGWF 106
Query: 99 QIRDFDGTIGWINKSLLS---GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
++ + +G G+++ ++ + + T N +N+ P +V V G
Sbjct: 107 KV-NVNGKTGYVSSDFVTTGEKTGTTVQQGTGNYTVNVSSLNVRTGPSASHTVVGTVGKG 165
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +W + G++ K +
Sbjct: 166 QTVQVVGEVQDWFKINHNGGTGYVSKDFV 194
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ S N R GP +TVV T + KG V+VV E ++W +I + +G G+++K ++
Sbjct: 140 TVNVSSLNVRTGPSASHTVVGT-VGKGQTVQVVGEVQDWFKI-NHNGGTGYVSKDFVTKG 197
Query: 117 GKRSAIVSPWNRKTNNPIYIN-------------LYKKPDIQSIIVAKVEPGVLLTIREC 163
G + + + + NN + I + P + ++ V G L +
Sbjct: 198 GTTTNVSTETEKPNNNEMTIRKDGSYVVDTGALRVRTGPATYNAVIGGVVQGQTLQVIGG 257
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 258 ENGWYKINHQGRTGYVSADHV 278
>gi|152975287|ref|YP_001374804.1| NLP/P60 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024039|gb|ABS21809.1| NLP/P60 protein [Bacillus cytotoxicus NVH 391-98]
Length = 418
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W ++ +++G G+I+K ++
Sbjct: 132 TVNVSSLNVRTGPSTSHTVLGS-VHKGKVVQVVGEVQDWFKV-NYNGGTGYISKDFVTKG 189
Query: 119 RSAIVSPWNRKTNNPI--------------YINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+A+ S + N + + P + ++ V G +L +
Sbjct: 190 GTAVSSQTEKPAANNSVALQTGGAYVVNTGALKVRTGPATYNAVIGGVTRGQVLQVTGVE 249
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 250 NGWYKINHNGRTGYVSADYV 269
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ A N R G G + ++ +T+G ++V E W ++ + +G G+++ ++
Sbjct: 60 TVTADVLNVRSGAGTEHNIISK-VTEGQVLQVTGEENGWFKV-NVNGKAGYVSGDFVTTG 117
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K +A+ T N +N+ P ++ V G ++ + +W
Sbjct: 118 GTKGTAVQQGTGNYTVNVSSLNVRTGPSTSHTVLGSVHKGKVVQVVGEVQDWFKVNYNGG 177
Query: 176 EGWIKKQKI 184
G+I K +
Sbjct: 178 TGYISKDFV 186
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ + I++KV G +L + W G++ +
Sbjct: 58 KYTVTADVLNVRSGAGTEHNIISKVTEGQVLQVTGEENGWFKVNVNGKAGYVSGDFV 114
>gi|311031526|ref|ZP_07709616.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. m3-13]
Length = 561
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TIK + N R P + V+ L +G V ++ E NW +I +G GWI L
Sbjct: 235 ATIKVAGLNVRNEPTLNGKVL-EQLPQGTTVSIISERNNWCEIEYDNGKTGWIAGWFLEK 293
Query: 118 KRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+ +P N+ P S ++ + + G +I W +
Sbjct: 294 SGVSSPTPSQSSDGTIVIVDDATNIRSAPSTDSKVILRADEGEEFSIVAVEDNWYKIKLH 353
Query: 173 LDTEGWIK 180
+EG++
Sbjct: 354 DGSEGFVA 361
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SL 114
V + R GPG ++VV V+ ++E ENW ++ DG GW+ K ++
Sbjct: 75 VQVLTDDLRVRSGPGTNFSVVGFLHASATSVQYLEENENWVKVH-SDGVEGWVAKEFVTI 133
Query: 115 LSGKR---------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L+ K+ S + T +N+ +P QS ++ + G + + G
Sbjct: 134 LAKKKEEQQAETEESTEETEGQSATITTDGLNIRSEPSTQSEVLGTLSSGQQVEVLAIRG 193
Query: 166 EWCFGYNLDTEGWIKKQ 182
EW T GW+
Sbjct: 194 EWLNISFNGTVGWVHSD 210
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
TI N R P V+ T L+ G VEV+ W I F+GT+GW++ +
Sbjct: 157 ATITTDGLNIRSEPSTQSEVLGT-LSSGQQVEVLAIRGEWLNIS-FNGTVGWVHSDYANI 214
Query: 117 --------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
S SP T +N+ +P + ++ ++ G ++I WC
Sbjct: 215 SQSPSGSGTHGSGSDSPKTEATIKVAGLNVRNEPTLNGKVLEQLPQGTTVSIISERNNWC 274
Query: 169 FGYNL-DTEGWIK 180
GWI
Sbjct: 275 EIEYDNGKTGWIA 287
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P ++ + + +G VV+ W +I+ GW+ L++
Sbjct: 1 MATDVLNVRETPDAN-GIIISKVQRGESYPVVESQGEWLKIQVTSSKAGWVASFLVTESS 59
Query: 120 SAIVSPWNRKTNNP------IYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGEWCFGYN 172
S +R ++ + + P +V + + E + W ++
Sbjct: 60 EGARSTASRSSDGANVQVLTDDLRVRSGPGTNFSVVGFLHASATSVQYLEENENWVKVHS 119
Query: 173 LDTEGWIKKQKI 184
EGW+ K+ +
Sbjct: 120 DGVEGWVAKEFV 131
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R P V+ +G +V +NW +I+ DG+ G++ +++ K +A
Sbjct: 314 DATNIRSAPSTDSKVI-LRADEGEEFSIVAVEDNWYKIKLHDGSEGFVAGWIVATKGNA 371
>gi|255655134|ref|ZP_05400543.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296451122|ref|ZP_06892863.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296880526|ref|ZP_06904488.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296259943|gb|EFH06797.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296428480|gb|EFH14365.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 424
Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGK-ANNGEVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 122 I-----------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGANNSSNSNSTNNSDKKPSSEESIEGKNGKVTSTVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 234 ELKAKNNGWYKVKLSNGTTGWVSGSYI 260
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 61/174 (35%), Gaps = 26/174 (14%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + A+ ++ I A + EK T+ AS N R GP V L K
Sbjct: 6 AALGIGAVAVSVSSINASALEKG-----------TVTASALNIRSGPSSDCDKV-AKLYK 53
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLL-------------SGKRSAIVSPWNRKTN 131
G VE++++ W ++R +GW + + + S N K N
Sbjct: 54 GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNPNNSTSSGTTISGNGKVN 113
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ +V K G ++ + E S W + GW Q I
Sbjct: 114 VSSRLNVRSGAGTNYSLVGKANNGEVVKLLEQSNGWYKIKLSNGVTGWASSQYI 167
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R GPG Y+++ L G VE+ + W +++ +GT GW++ S +S
Sbjct: 210 SLNVRSGPGTSYSIIGK-LNGGDVVELKAKNNGWYKVKLSNGTTGWVSGSYISETNEGTK 268
Query: 124 SPWNRKTNNPIYINLYKKPD 143
N +N N KP
Sbjct: 269 ENSNSSSNQNSQSNNNSKPS 288
>gi|254974669|ref|ZP_05271141.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255092057|ref|ZP_05321535.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255313794|ref|ZP_05355377.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
gi|255516475|ref|ZP_05384151.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255649575|ref|ZP_05396477.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|306519701|ref|ZP_07406048.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
Length = 424
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGK-ANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 122 I-----------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 234 ELKSKNNGWYKVKLSSGTIGWVSASYI 260
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 61/174 (35%), Gaps = 26/174 (14%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + A+ ++ I A + EK T+ AS N R GP V L K
Sbjct: 6 AALGIGAVAVSVSSINASALEKG-----------TVTASALNIRSGPSSDCDKV-AKLYK 53
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLL-------------SGKRSAIVSPWNRKTN 131
G VE++++ W ++R +GW + + + S N K N
Sbjct: 54 GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNQNNPTSSGTTISGNGKVN 113
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ +V K G ++ + E S W + GW Q I
Sbjct: 114 VSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYI 167
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E + + V++ N R GPG Y+++ L G VE+ + W +++
Sbjct: 193 SSEESIEGKNGKVTSAVSL-----NVRSGPGTSYSIIGK-LNGGDVVELKSKNNGWYKVK 246
Query: 102 DFDGTIGWINKSLLSGKR 119
GTIGW++ S +S
Sbjct: 247 LSSGTIGWVSASYISETN 264
>gi|301053511|ref|YP_003791722.1| NLP/P60 family protein [Bacillus anthracis CI]
gi|300375680|gb|ADK04584.1| NLP/P60 family protein [Bacillus cereus biovar anthracis str. CI]
Length = 399
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWLKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S +V+ + + P + ++ V G +L + W + G+
Sbjct: 193 GSYVVNTG--------ALKVRTGPATYNAVIGGVTNGTVLNVTGAENGWYKINHNGRAGY 244
Query: 179 IKKQKI 184
+ +
Sbjct: 245 VSADFV 250
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWLKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 117
>gi|210622607|ref|ZP_03293267.1| hypothetical protein CLOHIR_01215 [Clostridium hiranonis DSM 13275]
gi|210154108|gb|EEA85114.1| hypothetical protein CLOHIR_01215 [Clostridium hiranonis DSM 13275]
Length = 540
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 9/158 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + P+L ++ E + + ++ N R P + L KG V
Sbjct: 11 MAAASLAMIPMLTMNVNAENIKTGIV------SSAYLNVRYSPSASAKLQLV-LKKGNKV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV--SPWNRKTNNPIYINLYKKPDIQS 146
V+ E W +I+ G GW+ +S K AI + +K +N+ PD
Sbjct: 64 TVIGEKNGWYKIKTATGKTGWVVSKYISLKADAIRKDTRGIKKIVTATTLNVRSGPDTSY 123
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+ + + S W G++ + +
Sbjct: 124 TSIGKLYKNNEVDVISESNGWSKIQFGSKVGYVSSEYL 161
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R GP YT + L K V+V+ E W +I+ F +G+++ L
Sbjct: 108 VTATTLNVRSGPDTSYTSIGK-LYKNNEVDVISESNGWSKIQ-FGSKVGYVSSEYLKATT 165
Query: 120 S----------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + +++ Q + + G + + W
Sbjct: 166 TDNNNSGITGNSQGTKKTIQEVTSSLLHVRNGAGGQYTKIDTLHKGDKVVVSSIENNWAK 225
Query: 170 GYNLDTEGWI 179
G++
Sbjct: 226 VEYDGKNGYV 235
>gi|295702401|ref|YP_003595476.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294800060|gb|ADF37126.1| SH3 domain protein [Bacillus megaterium DSM 319]
Length = 444
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS+ N R G G Y + + +TKG + VV + +W +I +++G G+++ +
Sbjct: 115 TVTASKLNVRSGAGTNYASIGS-VTKGQKLSVVSKSGSWYKI-NYNGRTGYVSSDYVQAS 172
Query: 119 RSAIV-SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + T +N+ + V G L++ SG W G
Sbjct: 173 GTTTPPAESTTYTVTASMLNVRSGAGTNYASIGSVTKGQKLSVVSKSGSWYKINYNGRTG 232
Query: 178 WIKKQKI 184
++ +
Sbjct: 233 YVSSDYV 239
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 4/166 (2%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K + + T + + P + + + AS+ N R G G Y ++
Sbjct: 7 KRIMVGMALTATLATAVTPGFGSIGGNQEKAYAATVTY-KVTASKLNVRSGAGTNYGIIG 65
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-VSPWNRKTNNPIYINL 138
+ K + V+ + +W +I +++G G+++ + +A + T +N+
Sbjct: 66 NVV-KDQMLSVMSKSGSWYKI-NYNGRTGYVSSDYVQASGTATPPAESTTYTVTASKLNV 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G L++ SG W G++ +
Sbjct: 124 RSGAGTNYASIGSVTKGQKLSVVSKSGSWYKINYNGRTGYVSSDYV 169
>gi|260682739|ref|YP_003214024.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260686337|ref|YP_003217470.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|260208902|emb|CBA61884.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260212353|emb|CBE03160.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 427
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 118 SSRLNVRSGAGTNYSLVGK-ANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 176
Query: 122 I-----------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + N K + + +N+ P I+ K+ G ++
Sbjct: 177 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 236
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 237 ELKSKNNGWYKVKLSSGTIGWVSASYI 263
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 18/173 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ AI +A+S T+ AS N R GP V L KG
Sbjct: 2 IVVKKAIAALGIGAVAVSVSSINASALEKG---TVTASALNIRSGPSSDCDKV-AKLYKG 57
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLL-------------SGKRSAIVSPWNRKTNN 132
VE++++ W ++R +GW + + + S N K N
Sbjct: 58 KTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNQNNPTSSGTTISGNGKVNV 117
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ +V K G ++ + E S W + GW Q I
Sbjct: 118 SSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYI 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E + + V++ N R GPG Y+++ L G VE+ + W +++
Sbjct: 196 SSEESIEGKNGKVTSAVSL-----NVRSGPGTSYSIIGK-LNGGDVVELKSKNNGWYKVK 249
Query: 102 DFDGTIGWINKSLLSGKR 119
GTIGW++ S +S
Sbjct: 250 LSSGTIGWVSASYISETN 267
>gi|327439655|dbj|BAK16020.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 533
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N +I L+I ++ + P +V A R GPG+ Y ++
Sbjct: 1 MKKNKIIVGLSILILFTAVIPYNFSARPAYANGEPLYV--NAEILYLREGPGLSYPII-D 57
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP----IYI 136
L +G + +++ +W ++ GW+ L+ ++A V + +
Sbjct: 58 TLKEGTEIISIEKQGDWHHVQ-VGQQEGWVAAWLV---KTANVQKDSSSDKTVISQVDSL 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
N+ P + + ++ K+ G + +W + GW+
Sbjct: 114 NVRVAPSLSASVLTKISSGTESKFLQQEQDWIQIQFGEMTGWV 156
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 12/138 (8%)
Query: 50 EKKPL----PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+P+ P T+ S N R P + + ++G +V+ NW +I G
Sbjct: 183 SNEPIEQIDPNTFTVNVSAVNIRKKPDLTAKKLGL-ASEGQQFKVLSRDHNWVEIEYEKG 241
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLL 158
GWI + + + + K ++ NL + P S +V + G
Sbjct: 242 KKGWIYSFYGTFTKQLKQNHSSEKEEAKNFVTIIYNGTNLRESPSTSSNVVVIADAGHTY 301
Query: 159 TIRECSGEWCFGYNLDTE 176
I E G+W D +
Sbjct: 302 PIVESEGDWFKIAVKDQQ 319
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
EK+ FVTI + N R P VV G +V+ +W +I D
Sbjct: 261 HSSEKEEAKNFVTIIYNGTNLRESPSTSSNVV-VIADAGHTYPIVESEGDWFKIAVKDQQ 319
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ ++S S + N +
Sbjct: 320 TAYVANWVVSKNNSQGTTSQNNTSQVAER 348
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N + L + P + I+ ++ G + E G+W EGW+
Sbjct: 39 NAEILYLREGPGLSYPIIDTLKEGTEIISIEKQGDWHHVQVGQQEGWVA 87
>gi|210623715|ref|ZP_03293999.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
gi|210153403|gb|EEA84409.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
Length = 497
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 20/143 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+S N R GPG ++++ + L G V+ ++ W ++ +G+ GW++ +S
Sbjct: 195 TSSGLNVRKGPGTNHSIIGS-LAGGSVVQAKEKSGGWVKVVLPNGSTGWVSGQYVSSTNE 253
Query: 121 AIVSPWNRKTNNPIY------------------INLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + + + N P +N+ K P + IV + G ++ ++E
Sbjct: 254 STSNSESSQNNKPPQNNESTAASGRVKVTISKGLNIRKGPGTSNAIVGSLAGGSVVEVKE 313
Query: 163 CSGEWCFGY-NLDTEGWIKKQKI 184
S W EGW+ +
Sbjct: 314 KSSGWYKIKTANGVEGWVSGDYV 336
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 15/165 (9%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+A A LA+S + T+ A N R GPGI Y+ L KG V
Sbjct: 4 AIAALGISAVTLAMSSADSSALET-----ATVTADTLNMRSGPGISYSKRGV-LHKGAKV 57
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-------TNNPIYINLYKK 141
++++ + W +I+D G W++ LS S + + + +NL +
Sbjct: 58 TILEKSKGWVKIKDSSGKTAWVSGQYLSTSGGNSSSSSSSESAGYIAYVSVNSSLNLRSE 117
Query: 142 PDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNL-DTEGWIKKQKI 184
++A ++ + I E W GW+ + +
Sbjct: 118 ASTSGSVIASLKNSEKVQIIEKKDNGWSKVKTESGKIGWVSSKYL 162
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 20/146 (13%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL 115
+V++ +S N R +V+ L V+++++ +N W +++ G IGW++ L
Sbjct: 105 YVSVNSS-LNLRSEASTSGSVI-ASLKNSEKVQIIEKKDNGWSKVKTESGKIGWVSSKYL 162
Query: 116 SGKRS----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ ++ + N K N +N+ K P I+ + G ++
Sbjct: 163 VNTPTNSGNTSSQENSSSQNDSVATSGNVKVNTSSGLNVRKGPGTNHSIIGSLAGGSVVQ 222
Query: 160 IRECSGEWCFGYN-LDTEGWIKKQKI 184
+E SG W + GW+ Q +
Sbjct: 223 AKEKSGGWVKVVLPNGSTGWVSGQYV 248
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R GPG +V + L G VEV ++ W +I+ +G GW++ ++
Sbjct: 284 SKGLNIRKGPGTSNAIVGS-LAGGSVVEVKEKSSGWYKIKTANGVEGWVSGDYVTPT 339
>gi|149182098|ref|ZP_01860582.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
gi|148850200|gb|EDL64366.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
Length = 870
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 15/161 (9%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
L + E + + TI A N R G Y+V+ L G V+V+ +E
Sbjct: 64 LGKVKGWVPSASTAESSLIGKETTINADTVNIRKGASTSYSVI-DKLNTGKVVKVIDTFE 122
Query: 96 N-----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI---NLYKKPDIQSI 147
N W +I FDG GW+ LLS + +T + I + K
Sbjct: 123 NSLNELWYRIE-FDGKRGWVFHRLLSETPLISAPGPSAETKQKVVILSSVVKKGATEAYD 181
Query: 148 IVAKVEPGVLLTIRE-----CSGEWCFGYNLDTEGWIKKQK 183
VA+V+ G + I + W +GW+ +
Sbjct: 182 EVARVQAGDTVIILDSFTNSQKELWYRVDLGTVKGWVNSKA 222
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 15/152 (9%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----W 97
S + E + LP + K + N G Y +V L V+V+ +EN W
Sbjct: 304 SQDTEPETEIVLPDNMYAKVNGVNVHSGATTSYKIV-EKLRANQKVKVISTFENGFNETW 362
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-- 155
+++ D GW+ L+ S + NL P + S++V + G
Sbjct: 363 VRVQVSDQLSGWVIIDSLTESSSI----NKSLYISVDVANLRSAPSLDSLVVDQTSKGTH 418
Query: 156 ---VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V W W + +
Sbjct: 419 ITAVREEKDSNGNTWYNALYNGQFIWAHESVV 450
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 15/131 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWINKSL 114
I+ R R G Y V T V ++ E+ E W ++ DGT GW+
Sbjct: 463 IRTQRGIMRSGATYQYPVKRTISYSDR-VTLLSEFINSSNEKWINVQLQDGTKGWV---- 517
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
V + L K I +E L + +W
Sbjct: 518 ----PDYEVKTDYVRIYALQKAVLRKGASSHYAISENLELNETLLVLRELNDWINVETAD 573
Query: 174 DTEGWIKKQKI 184
GW+ K ++
Sbjct: 574 GERGWVNKSQV 584
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-KRSAIVSP 125
R G Y + L + V++E +W + DG GW+NKS +S + +++ P
Sbjct: 537 LRKGASSHYAIS-ENLELNETLLVLRELNDWINVETADGERGWVNKSQVSNISKQSLIQP 595
Query: 126 WNRKTNNPIYINLYKKPDI 144
+Y+ +KKP
Sbjct: 596 ATSSVGKDLYVT-WKKPSE 613
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Query: 120 SAIVSPWNRKTNN---PIYINLYKKPDIQSIIVAKVEPG----VLLTIRECSGE-WCFGY 171
+A + PW + + + K Q +V +E G V+ GE W
Sbjct: 4 TAFLFPWVVNADELSLKDNVEVRKGATPQYPVVMHLEKGTEINVIDEFTNAQGEKWYRID 63
Query: 172 NLDTEGWIKKQK 183
+GW+
Sbjct: 64 LGKVKGWVPSAS 75
>gi|20806860|ref|NP_622031.1| 5-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase'
[Thermoanaerobacter tengcongensis MB4]
gi|20515330|gb|AAM23635.1| 5-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases'
[Thermoanaerobacter tengcongensis MB4]
Length = 1229
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
++ +P+ + + AS N R G G+ Y V+ L G V +++E W +I
Sbjct: 1086 SQQTEQQTASQPVYNYGIVTASALNVREGAGLRYKVIGV-LPAGKVVTLLEEVNGWYKI- 1143
Query: 102 DFDGTIGWINKSLLSGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
D++G G+I ++ S +V K +N+ + + + V G L
Sbjct: 1144 DYNGKTGYIYSKYVAATPNPSNVVVLKAVKVTAKSGLNVRVNNSLNARKIGAVPYGTELK 1203
Query: 160 IRECSGEWCFGYNLDTEGWIKKQ 182
+ W G++ +
Sbjct: 1204 VVGEYNGWYQVLYNGGFGYVYAK 1226
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 19/117 (16%)
Query: 84 KGLPVEVVKEYE--------NWR--------QIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ L + ++E+ +W ++ GT S + +++A +N
Sbjct: 1044 RNLMIRYIQEHGTISPVVESDWYISTTPVQEEVEVSQGTT---QPSQQTEQQTASQPVYN 1100
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ ++ + G ++T+ E W G+I + +
Sbjct: 1101 YGIVTASALNVREGAGLRYKVIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYSKYV 1157
>gi|168217965|ref|ZP_02643590.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
gi|182380004|gb|EDT77483.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
Length = 553
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVL 393
Query: 117 ------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
K S V+ N +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLRNNDKVEIIKEV 452
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 453 DGWYEIRFDGKVGYASKSYI 472
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +IR FDG +G+ +KS ++
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIR-FDGKVGYASKSYITIV 475
Query: 117 ------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G S I + +N+ P ++ + G + I W
Sbjct: 476 NEGANNGTDSVIKEGTVYGVST--NLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKV 533
Query: 171 ----YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 534 QFNASTGTKNGYVSKDYI 551
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P ++ L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRII-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S V+ N +N+ P ++ + + I
Sbjct: 308 INDNPEDEETNGDIEIEKPSVSVNKKGIVKVN-SALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 14/90 (15%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+I D DG S + + K N +N+ + P I+ K+ ++
Sbjct: 226 RISDGDG----------SLEDDGLKPKMQGKVTNASVLNVRESPSTSGRIIHKLNRNQVV 275
Query: 159 TIRECSGEWCFG-YNLDTE---GWIKKQKI 184
I E W Y + G++ K I
Sbjct: 276 GIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|110800117|ref|YP_695040.1| N-acetylmuramoyl-L-alanine amidase [Clostridium perfringens ATCC
13124]
gi|110674764|gb|ABG83751.1| putative enterotoxin, EntD [Clostridium perfringens ATCC 13124]
Length = 553
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVV 393
Query: 117 ------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
K S V+ N +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLRNNDKVEIIKEV 452
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 453 DGWYEIRFNGKVGYASKSYI 472
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T L VE++KE + W +IR F+G +G+ +KS +
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIR-FNGKVGYASKSYITIV 475
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-- 170
S + V +N+ P ++ + G + I E W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILEEENGWYKVQF 535
Query: 171 --YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S V+ N +N+ P ++ + + I
Sbjct: 308 INENPEDEETNGDIEIEKPSVSVNKKGIVKVN-SALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|226314188|ref|YP_002774084.1| hypothetical protein BBR47_46030 [Brevibacillus brevis NBRC 100599]
gi|226097138|dbj|BAH45580.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 612
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
++ +L + LA++F + ++ LS + V + + N R PG
Sbjct: 27 QRGTRNLLLRVNVSLLAVFFLIL-LMPLSIARAATH-------VEVAVDQLNIRSEPGTT 78
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+V T L K + + K+ ++W Q++ +G GWIN + + V +N
Sbjct: 79 TQIVAT-LKKATRLPITKQQKDWTQVKLPNGNTGWINNKYV---KMIEVPQIKYVKSNVD 134
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+N+ +P+ + I+ ++ + GEW D + GW+K +
Sbjct: 135 MLNVRAEPNPTAQILQIIDNNGVFLQMRKQGEWAQIKLSDQKNGWVKASFL 185
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K +N R GP + ++ T + G VV+ +W IR D + +I ++ +
Sbjct: 320 VKNPDSNIRNGPTTDHAIIGT-VQPGQVFPVVQTVGDWYLIRLADNSTAYIAGWIVDKIQ 378
Query: 120 SAIVSPWNRKT 130
A P T
Sbjct: 379 PAGTLPPTGAT 389
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P ++V N R P ++ G+ ++ +++ W QI+ D GW+
Sbjct: 123 VPQIKYVKSNVDMLNVRAEPNPTAQILQIIDNNGVFLQ-MRKQGEWAQIKLSDQKNGWVK 181
Query: 112 KSLLSGK 118
S L+
Sbjct: 182 ASFLTET 188
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-----GWI 179
N+ P I+ V+PG + + + G+W D GWI
Sbjct: 326 NIRNGPTTDHAIIGTVQPGQVFPVVQTVGDWYLIRLADNSTAYIAGWI 373
>gi|168211690|ref|ZP_02637315.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
gi|170710343|gb|EDT22525.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
Length = 547
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 10/133 (7%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LCNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVV 393
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 394 DNESNEEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYEIK 453
Query: 172 NLDTEGWIKKQKI 184
G+ K I
Sbjct: 454 FNGKVGYASKSYI 466
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G +G+ +KS +
Sbjct: 412 VKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIK-FNGKVGYASKSYITIV 469
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-- 170
S + +N+ P ++ + G + I W
Sbjct: 470 NEGSNNGTESEIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 529
Query: 171 --YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 530 NASTGTKNGYVSKDYI 545
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S + +N+ P ++ + + I
Sbjct: 308 INENPEDEETNGDIEIEKPSV-SANKKGIVKVNSALNMRSGPGSNYGVIGTLCNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|307244350|ref|ZP_07526463.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Peptostreptococcus stomatis DSM 17678]
gi|306492251|gb|EFM64291.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Peptostreptococcus stomatis DSM 17678]
Length = 504
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ LA+ + + + I N R+ PG +V L KG
Sbjct: 7 LSALAVLPLFGASAFAAGQVGV-----------INYEYVNIRVNPGSNESVKFV-LKKGD 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-----VSPWNRKTNNPIYINLYKK 141
VE++ + ++W I+ F+ GW+ +S ++ K + KT + +NL K+
Sbjct: 55 EVEILSKRDSWVNIK-FNNNDGWVQESAIAEKSETVNNIKTAPASITKTVSSNTLNLRKE 113
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +S ++ ++ G + + E W G+
Sbjct: 114 ANTKSSVIQVLKKGDRVRVLEEGSAWTKVTYNGKTGY 150
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ ++ N R +V+ L KG V V++E W ++ ++G G+++ LLS
Sbjct: 102 TVSSNTLNLRKEANTKSSVI-QVLKKGDRVRVLEEGSAWTKVT-YNGKTGYLSSRLLSAS 159
Query: 119 RSAIVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + RK +++ K + S +A + G + + W G
Sbjct: 160 STGSTASAGRKMMVMANNLSVRKSANSLSEKLADLSRGDTVEYISSTNGWNKVRYKGQIG 219
Query: 178 WI 179
++
Sbjct: 220 YV 221
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ N Y+N+ P + ++ G + I W + +GW+++
Sbjct: 22 AAGQVGVINYEYVNIRVNPGSNESVKFVLKKGDEVEILSKRDSWVNIKFNNNDGWVQESA 81
Query: 184 I 184
I
Sbjct: 82 I 82
>gi|229096497|ref|ZP_04227468.1| Enterotoxin [Bacillus cereus Rock3-29]
gi|228686703|gb|EEL40610.1| Enterotoxin [Bacillus cereus Rock3-29]
Length = 429
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTG 252
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 AENGWYKINHNGRTGYVSADYV 274
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKQGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 120
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + + T N +N+ P ++ V G + + +W
Sbjct: 121 GNKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + T +N+ +++KV+ G +L + W G++
Sbjct: 54 VETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQVIGQENGWFKVSVNGQTGYVS 113
Query: 181 KQKI 184
+
Sbjct: 114 GDFV 117
>gi|51892167|ref|YP_074858.1| putative N-acetylmuramoyl-L-alanine amidase [Symbiobacterium
thermophilum IAM 14863]
gi|51855856|dbj|BAD40014.1| putative N-acetylmuramoyl-L-alanine amidase [Symbiobacterium
thermophilum IAM 14863]
Length = 777
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 11/147 (7%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+L S E +P + N R GPG Y ++ L V+
Sbjct: 7 AAFVWVLLSSVPAEAATLRP------LDQDGLNVRSGPGTEYAIIG-GLGYDQWATVLGR 59
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+W ++R G GW+ R + + +N+ ++P + + ++ +V
Sbjct: 60 EGDWYRVRLQSGAEGWVAAWF---SRVLLEDEFRYAVVETDILNVRREPGLDAPVLTRVY 116
Query: 154 PGVLLTIRECSGEWCFGY-NLDTEGWI 179
G + + E EW + TEGW+
Sbjct: 117 QGQYVRLLEMIPEWWRIQLDDGTEGWV 143
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 44/172 (25%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ ++ N R PG+ V+ T + +G V +++ W +I+ DGT GW+ +
Sbjct: 90 RYAVVETDILNVRREPGLDAPVL-TRVYQGQYVRLLEMIPEWWRIQLDDGTEGWVFAQYV 148
Query: 116 ---------------SGKRSAIVSPWN---------------------------RKTNNP 133
+G+ A V+P + +
Sbjct: 149 RQAAGPPGGQPVEPGAGEAPAPVTPPASQPPAAPPGTVPDVSFPPPSEPVPDPAKVVSVV 208
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+Y P+ ++ V PG L + + W + D GW+ + +
Sbjct: 209 QETGIYAGPNSEARRTDTVRPGERLRLLDARDGWVRVASPQDRWGWVPGELV 260
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 29/144 (20%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------------- 115
GP + G + ++ + W ++ GW+ L+
Sbjct: 215 AGPNSEAR-RTDTVRPGERLRLLDARDGWVRVASPQDRWGWVPGELVQVVDGPLRIQVAE 273
Query: 116 --------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ A P L+ P + ++A++ PG L +
Sbjct: 274 SGWSVEKPAAQQPAGRQPGAAEIVAGDAVVGPRGATLHLIPATAARVLAELSPGEPLEVL 333
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
+ G+W + GW + +
Sbjct: 334 DRDGQWVKVRLSSGQVGWTRGALL 357
>gi|289578030|ref|YP_003476657.1| NLP/P60 protein [Thermoanaerobacter italicus Ab9]
gi|289527743|gb|ADD02095.1| NLP/P60 protein [Thermoanaerobacter italicus Ab9]
Length = 306
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 11/165 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + + E + + I + N R + +V+ T L
Sbjct: 8 MIFGISVFGATLIGSSFLNPAFA-EGLGIGK---ITGNYVNVRTQGSLAGSVI-TQLNWN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-----NNPIYINLYK 140
V V+ + W +I+ DG GW+ LS + + VS + + Y+N+
Sbjct: 63 DTVTVLDKQNGWYKIKLSDGREGWVFGEYLSVRNFSNVSRGDTENLSVGIVTGNYVNVRS 122
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
K + I+ ++ +T+ + W + EGWI Q +
Sbjct: 123 KGSLSGSIITQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYL 167
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R + +++ T L K V V+ + W +I+ DG GWI L+ +
Sbjct: 113 VTGNYVNVRSKGSLSGSII-TQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYLAVRS 171
Query: 120 SAIVSPWNRKTN 131
++ +S +
Sbjct: 172 TSNISRGEVDRS 183
>gi|229102590|ref|ZP_04233294.1| Enterotoxin [Bacillus cereus Rock3-28]
gi|228680817|gb|EEL34990.1| Enterotoxin [Bacillus cereus Rock3-28]
Length = 425
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTG 252
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 AENGWYKINHNGRTGYVSADYV 274
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKQGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 120
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + + T N +N+ P ++ V G + + +W
Sbjct: 121 GNKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + T +N+ +++KV+ G +L + W G++
Sbjct: 54 VETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQVIGQENGWFKVSVNGQTGYVS 113
Query: 181 KQKI 184
+
Sbjct: 114 GDFV 117
>gi|255100149|ref|ZP_05329126.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
gi|255306039|ref|ZP_05350211.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
Length = 424
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGK-ANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 122 I-----------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ S W + T GW+ I
Sbjct: 234 ELKAKSNGWYKVKLSSGTIGWVSASYI 260
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 26/174 (14%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + A+ ++ I A + EK T+ AS N R GP V L K
Sbjct: 6 AALGIGAVAVSVSSINASALEKG-----------TVTASALNIRSGPSSDCDKV-AKLYK 53
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA-------------IVSPWNRKTN 131
G VE++++ W ++R +GW + +S S+ N K N
Sbjct: 54 GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSSQNNSTSSGTTISGNGKVN 113
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ +V K G ++ + E S W + GW Q I
Sbjct: 114 VSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYI 167
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E + + V++ N R GPG Y+++ L G VE+ + W +++
Sbjct: 193 SSEESIEGKNGKVTSAVSL-----NVRSGPGTSYSIIGK-LNGGDVVELKAKSNGWYKVK 246
Query: 102 DFDGTIGWINKSLLSGKR 119
GTIGW++ S +S
Sbjct: 247 LSSGTIGWVSASYISETN 264
>gi|74318421|ref|YP_316161.1| hypothetical protein Tbd_2403 [Thiobacillus denitrificans ATCC
25259]
gi|74057916|gb|AAZ98356.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 156
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
GLP+EVV + ENW ++RD G + WI K+ L G R+ +V + +P
Sbjct: 57 GSGLPLEVVVDTENWAKVRDHSGRLAWIEKAALGGSRNVVV--------KAETSLVRTQP 108
Query: 143 DIQSIIVAKVEPGVLLTIRECSG--EWCFG-YNLDTEGWIKKQKIWG 186
+ + +V GVLL + W + GW+ ++WG
Sbjct: 109 RPDAEVAFRVARGVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWG 155
>gi|196039576|ref|ZP_03106881.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
gi|196029736|gb|EDX68338.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
Length = 579
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+KA + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VKADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S++ + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSSVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFTKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|126698729|ref|YP_001087626.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|115250166|emb|CAJ67987.1| putative SH3-domain protein [Clostridium difficile]
Length = 431
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 122 SSRLNVRSGAGTNYSLVGK-ANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 180
Query: 122 I-----------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + N K + + +N+ P I+ K+ G ++
Sbjct: 181 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 240
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ S W + T GW+ I
Sbjct: 241 ELKAKSNGWYKVKLSSGTIGWVSASYI 267
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 61/178 (34%), Gaps = 18/178 (10%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L ++ AI +A+S T+ AS N R GP V
Sbjct: 1 MLGGVIVVKKAIAALGIGAVAVSVSSINASALEKG---TVTASALNIRSGPSSDCDKV-A 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA-------------IVSPWN 127
L KG VE++++ W ++R +GW + +S S+ N
Sbjct: 57 KLYKGKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSSQNNSTSSGTTISGN 116
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
K N +N+ +V K G ++ + E S W + GW Q I
Sbjct: 117 GKVNVSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYI 174
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E + + V++ N R GPG Y+++ L G VE+ + W +++
Sbjct: 200 SSEESIEGKNGKVTSAVSL-----NVRSGPGTSYSIIGK-LNGGDVVELKAKSNGWYKVK 253
Query: 102 DFDGTIGWINKSLLSGKR 119
GTIGW++ S +S
Sbjct: 254 LSSGTIGWVSASYISETN 271
>gi|157674079|gb|ABV60156.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 186
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 187 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 246
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 247 ENGWYKINHNGRTGYVSADFV 267
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 57 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 114
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 115 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 174
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 175 TGYVSKDFV 183
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 55 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 111
>gi|294497036|ref|YP_003560736.1| SH3 domain-containing protein [Bacillus megaterium QM B1551]
gi|294346973|gb|ADE67302.1| SH3 domain protein [Bacillus megaterium QM B1551]
Length = 444
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 4/166 (2%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L + T + + P + + + AS+ N R G G Y ++
Sbjct: 7 KKLMVGMALTATLATAVTPGFGSIGGNQGKAYAATVTY-KVTASKLNVRSGAGTNYGIIG 65
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV-SPWNRKTNNPIYINL 138
+ + K + VV + +W +I +++G G+++ + + + T +N+
Sbjct: 66 SVV-KDQMLSVVSKSGSWYKI-NYNGRTGYVSSDYVQASGTTTPPAESTTYTVTASTLNV 123
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G L++ SG W G++ +
Sbjct: 124 RSGAGTSYASIGSVTKGQKLSVVSKSGSWYKINYNGRTGYVSSDYV 169
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 3/127 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS N R G G Y + + +TKG + VV + +W +I +++G G+++ +
Sbjct: 115 TVTASTLNVRSGAGTSYASIGS-VTKGQKLSVVSKSGSWYKI-NYNGRTGYVSSDYVQAS 172
Query: 119 RSAIV-SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + T +N+ + V G L++ SG W G
Sbjct: 173 GTTTPPAESTTYTVTASTLNVRSGAGTSYASIGSVTKGQKLSVVSKSGSWYKINYNGRTG 232
Query: 178 WIKKQKI 184
++ +
Sbjct: 233 YVSSDYV 239
>gi|229172676|ref|ZP_04300234.1| Enterotoxin [Bacillus cereus MM3]
gi|228610808|gb|EEK68072.1| Enterotoxin [Bacillus cereus MM3]
Length = 426
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTQGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + T +N+ +++KV+ G +L + W G++
Sbjct: 52 VETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVTVNGQTGYVS 111
Query: 181 KQKI 184
+
Sbjct: 112 GDFV 115
>gi|168214795|ref|ZP_02640420.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
gi|170713760|gb|EDT25942.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
Length = 553
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 18/140 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G IG+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKIGYVSSQYIKVV 393
Query: 117 ------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
K S V+ N +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLHNNDKVEIIKEV 452
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 453 DGWYKIKFNGKVGYASKSYI 472
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T VE++KE + W +I+ F+G +G+ +KS +
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGTLHN-NDKVEIIKEVDGWYKIK-FNGKVGYASKSYITIV 475
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + V +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGNDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 LDTE----GWIKKQKI 184
+ G++ K I
Sbjct: 536 NASTCTKNGYVSKDYI 551
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S V+ N +N+ P ++ + + I
Sbjct: 308 INENPEDEETNEDIEIEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKIGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|169342324|ref|ZP_02863395.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
gi|169299549|gb|EDS81612.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
Length = 553
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVV 393
Query: 117 ------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
K S V+ N +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLHNNDKVEIIKEV 452
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 453 DGWYEIKFNGKVGYASKSYI 472
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 17/138 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T VE++KE + W +I+ F+G +G+ +KS ++
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGTLHN-NDKVEIIKEVDGWYEIK-FNGKVGYASKSYITIV 475
Query: 117 ------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G S I + +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGNESVIKEGTVYGVST--NLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKV 533
Query: 171 ----YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 534 QFNASTGTKNGYVSKDYI 551
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S + +N+ P ++ + + I
Sbjct: 308 INENPEDEETNGDIEIEKPSV-SANKKGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|296502574|ref|YP_003664274.1| enterotoxin [Bacillus thuringiensis BMB171]
gi|296323626|gb|ADH06554.1| enterotoxin [Bacillus thuringiensis BMB171]
Length = 430
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 194
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 195 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 254
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 255 ENGWYKINHNGRTGYVSADFV 275
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 65 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 122
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 123 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 182
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 183 TGYVSKDFV 191
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 63 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 119
>gi|228958266|ref|ZP_04119994.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801425|gb|EEM48314.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 426
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|229144597|ref|ZP_04272999.1| Enterotoxin [Bacillus cereus BDRD-ST24]
gi|228638837|gb|EEK95265.1| Enterotoxin [Bacillus cereus BDRD-ST24]
Length = 428
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|118595211|ref|ZP_01552558.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
gi|118440989|gb|EAV47616.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
Length = 154
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ ++ Q L+ L I + P+L+ FV IK+ + GP T
Sbjct: 2 LINRVFQGLLLAVLFIAVSIQPVLSA-------------EFVAIKSKKTILYEGPS-DST 47
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+T+ P++V+ + ++W +++D +G I W+ S +R+ + N +
Sbjct: 48 SKEFIVTESYPLKVLVKLKDWTKVKDHEGKISWVKVQDTSNERTVMTLKSN--------V 99
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGY--NLDTEGWIKKQKIWGI 187
++ KP S+ +A V V L + + W + EG+I+ Q +WGI
Sbjct: 100 IVFYKPSFSSVKLADVGKYVALKLLSPIQADGWIEVKTLTQNIEGFIRVQDVWGI 154
>gi|157674093|gb|ABV60162.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 185 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNAGALKVRTGPATYNAVIGGVTNGTVLNVTGA 244
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 245 ENGWYKINHNGRTGYVSADFV 265
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 55 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 112
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 113 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 172
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 173 TGYVSKDFV 181
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 53 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 109
>gi|229106656|ref|ZP_04236896.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
gi|228676796|gb|EEL31402.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
Length = 559
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P ++ + +G ++V+ E +W ++ + +G IG+++ +S + +
Sbjct: 61 PNTSSAIMGR-VYEGEVLQVIGEENSWLKV-NHNGKIGYVSSEFISKNGVLAKTNIGKSR 118
Query: 131 N---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 119 SKIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S R GP +T++ + + KG V V E +NW +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-MYKGQVVRVTGEVQNWFKI-NYKGQDAYISKDYISKSG 256
Query: 120 S--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S V + + + P ++ V G L + W
Sbjct: 257 SNANEQQNNVTVQADGIYIVDATSLRVRTGPATYHSVIGGVLNGRTLQVTGVENGWLKIN 316
Query: 172 NLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 317 HNGRTGYVSSEYV 329
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ A+ R GP ++V+ L G ++V W +I + +G G+++ + K
Sbjct: 276 VDATSLRVRTGPATYHSVIGGVLN-GRTLQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 333
Query: 119 RSAIVSPWNRKTNNPIYI----------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
R P + + N+ ++ + G+ + + W
Sbjct: 334 RGTPPKPETSNPSTGATVDDYYVNVSVLNIRSGAGTNHGVIGALSKGIKVQVLFEQNGWK 393
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 394 KINYNGKNGYVSSKFL 409
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R P ++ + +G ++V+ E W +I + +G +G+++ +
Sbjct: 122 VTANVLRVRTQPNTSSAIMGR-VYEGKVLQVIGEDNGWLKI-NHNGKVGYVSSQFVKDSG 179
Query: 120 S--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S N + + P I+ + G ++ + W
Sbjct: 180 SNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVRVTGEVQNWFKIN 239
Query: 172 NLDTEGWIKKQKI 184
+ +I K I
Sbjct: 240 YKGQDAYISKDYI 252
>gi|164686331|ref|ZP_02210361.1| hypothetical protein CLOBAR_02769 [Clostridium bartlettii DSM
16795]
gi|164601933|gb|EDQ95398.1| hypothetical protein CLOBAR_02769 [Clostridium bartlettii DSM
16795]
Length = 293
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 16/164 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K L ++ + TL I + + K+ EK+P+ + + N R GP Y +
Sbjct: 1 MIKKLTSTAVATLTILTMMNTGAVFADSKDANEKEPV---ALVNVEKLNIRSGPSTSYDI 57
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ ++ + V+++ + W +I+ DG W N ++ +N
Sbjct: 58 IGSFEKEDS-VDLISIKDGWYKIKLEDGKKAWTNGQYIT----------LDGEVTVDKLN 106
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGY-NLDTEGWI 179
+ K P I IV E + I W + G+I
Sbjct: 107 VRKGPAITYDIVDTKEKEDKVKIVNSDENGWYEIELSDGETGFI 150
>gi|157674077|gb|ABV60155.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSLLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 189 GSAVSNETQQPTTHNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 248
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 249 ENGWYKINHNGRTGYVSADFV 269
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 59 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 116
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 117 GKTGTTVQQGTGTYTVNVSLLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 176
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 177 TGYVSKDFV 185
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 57 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 113
>gi|56475993|ref|YP_157582.1| of unknown function [Aromatoleum aromaticum EbN1]
gi|56312036|emb|CAI06681.1| conserved hypothetical protein of unknown function [Aromatoleum
aromaticum EbN1]
Length = 152
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ G PVEVV + W ++RD G + WI + LS KR+ +V+ P +
Sbjct: 53 VAPGTPVEVVVTLDKWVKVRDAGGALTWIERRALSEKRTVMVAV-------PRAVVRQHP 105
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGI 187
D S V+ VL + + W + T+G++K ++WG+
Sbjct: 106 ADEASAAFETVKDAVLEFVAQSGDGWIQVRHKDGTQGYLKISEVWGL 152
>gi|229059655|ref|ZP_04197033.1| Enterotoxin [Bacillus cereus AH603]
gi|228719668|gb|EEL71267.1| Enterotoxin [Bacillus cereus AH603]
Length = 425
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHDVISK-VKAGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 118
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + + T N +N+ P ++ V G + + +W
Sbjct: 119 GNKGTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAI------------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
SA+ V N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNV 250
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 TGAENGWYKINHNGRTGYVSADFV 274
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 27/74 (36%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N++ ++ + + + T +N+ +++KV+ G +L + W
Sbjct: 42 NQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHDVISKVKAGQVLQVIGQENGWFKV 101
Query: 171 YNLDTEGWIKKQKI 184
G++ +
Sbjct: 102 SVNGQTGYVSGDFV 115
>gi|229096418|ref|ZP_04227390.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
gi|228686980|gb|EEL40886.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
Length = 255
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P ++ + +G ++V+ E +W ++ + +G IG+++ +S + +
Sbjct: 61 PNTSSAIMGR-VYEGEVLQVIGEENSWLKV-NHNGKIGYVSSEFISKNGVLAKTNIGKSR 118
Query: 131 N---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 119 SKIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
>gi|157674086|gb|ABV60159.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 186
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P + ++ V G +L +
Sbjct: 187 GSAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVINGKVLNVTGA 246
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 247 ENGWYKINHNGRTGYVSADFV 267
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 57 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 114
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 115 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 174
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 175 TGYVSKDFV 183
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 55 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 111
>gi|229087710|ref|ZP_04219833.1| Enterotoxin [Bacillus cereus Rock3-44]
gi|228695545|gb|EEL48407.1| Enterotoxin [Bacillus cereus Rock3-44]
Length = 570
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ A + R G + ++ + +G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVTADVLHVRSGSSTSHDIISR-VYEGQKLNVIGEENGWFKI-NHNGQTGYVSGQFVSKN 107
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + VS T + + P+ S I+ +V G L++ W +
Sbjct: 108 GAKPN--VSTGGNNTVTADVLRVRTNPNTSSSIMGRVYEGQTLSVISEENGWVKINHNGK 165
Query: 176 EGWIKKQKIWGI 187
G++ Q + G+
Sbjct: 166 TGYVSGQFVSGV 177
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 11/135 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ A R P +++ + +G + V+ E W +I + +G G+++ +SG
Sbjct: 120 TVTADVLRVRTNPNTSSSIMGR-VYEGQTLSVISEENGWVKI-NHNGKTGYVSGQFVSGV 177
Query: 118 --------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + T N + + P + V G ++ + +W
Sbjct: 178 STNAGSSNNNTNVQEASGNYTVNVSSLRVRTGPSTSHTTLGSVHKGQVVKVTGEVQDWFK 237
Query: 170 GYNLDTEGWIKKQKI 184
++ K +
Sbjct: 238 INYAGQTAYLSKDYV 252
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T + + + KG V+V E ++W +I ++ G +++K ++
Sbjct: 198 TVNVSSLRVRTGPSTSHTTLGS-VHKGQVVKVTGEVQDWFKI-NYAGQTAYLSKDYVTKG 255
Query: 119 RS----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
S V N + + P ++ V G L +
Sbjct: 256 GSSSNVTEGNGQQEINDNVTVQTGGTYVVNATSLRVRTGPATYHGVLGGVLNGQTLNVVG 315
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 316 AENGWFKINHHGKTGYVSSEFV 337
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A+ R GP + V+ L G + VV W +I + G G+++ +
Sbjct: 284 VNATSLRVRTGPATYHGVLGGVLN-GQTLNVVGAENGWFKI-NHHGKTGYVSSEFVKFVK 341
Query: 116 SGKRSAIVSPWNRKTNNP-----------IYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + K P +N+ ++ + G + +
Sbjct: 342 GGTPTPEQPTQPEKPEQPQTAVGEYYINVAALNVRSGEGTNYSVIGALPQGQKVQVISEH 401
Query: 165 GEWCFGYNLDTEGWI 179
W G+I
Sbjct: 402 YGWSKINYNGRTGYI 416
>gi|229011289|ref|ZP_04168481.1| Enterotoxin [Bacillus mycoides DSM 2048]
gi|228749945|gb|EEL99778.1| Enterotoxin [Bacillus mycoides DSM 2048]
Length = 436
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDYVTKG 194
Query: 119 RSAI-----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
SA+ V N + + P + ++ V G +L +
Sbjct: 195 GSAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVT 254
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 255 GAENGWYKINHNGRTGYVSADFV 277
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 120
Query: 119 RSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + ++ T N +N+ P ++ V G + + +W
Sbjct: 121 GNKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFN 180
Query: 174 DTEGWIKKQKI 184
G++ K +
Sbjct: 181 GGTGYVSKDYV 191
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVSVNGQTGYVSGDFV 117
>gi|18309588|ref|NP_561522.1| enterotoxin [Clostridium perfringens str. 13]
gi|18144265|dbj|BAB80312.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 635
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVL 475
Query: 117 -----------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ +N+ P ++ + + I +
Sbjct: 476 DNESNEEKPVEPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVD 535
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 536 GWYEIRFNGKVGYASKSYI 554
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T L VE++KE + W +IR F+G +G+ +KS +
Sbjct: 500 VKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIR-FNGKVGYASKSYITIV 557
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-- 170
S + V +N+ P ++ + G + I W
Sbjct: 558 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGDENGWYKVQF 617
Query: 171 --YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 618 NASTGTKNGYVSKDYI 633
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S V+ N +N+ P ++ + + I
Sbjct: 308 INENPEDEETNGDIEIEKPSVSVNKQGIVKVN-SALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|229132826|ref|ZP_04261671.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228650653|gb|EEL06643.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 434
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI-----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVT 252
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 GAENGWYKINHNGRTGYVSADFV 275
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 118
Query: 119 RSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + ++ T N +N+ P ++ V G + + +W
Sbjct: 119 GNKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFN 178
Query: 174 DTEGWIKKQKI 184
G++ K +
Sbjct: 179 GGTGYVSKDFV 189
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVSVNGQTGYVSGDFV 115
>gi|229115429|ref|ZP_04244836.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228668043|gb|EEL23478.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
Length = 559
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P ++ + +G ++V+ E +W ++ + +G IG+++ +S + +
Sbjct: 61 PNTSSAIMGR-VYEGEVLQVIGEENSWLKV-NHNGKIGYVSSEFISKNGVLAKTNIGKSR 118
Query: 131 N---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 119 SKIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S R GP +T++ + + KG V V E +NW +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-MYKGQVVRVTGEVQNWFKI-NYKGQDAYISKDYISKSG 256
Query: 120 S--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S V + + + P ++ V G L + W
Sbjct: 257 SNANEQQNNVTVQADGIYIVDATSLRVRTGPATYHSVIGGVLNGRTLQVTGVENGWLKIN 316
Query: 172 NLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 317 HNGRTGYVSSEYV 329
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ A+ R GP ++V+ L G ++V W +I + +G G+++ + K
Sbjct: 276 VDATSLRVRTGPATYHSVIGGVLN-GRTLQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 333
Query: 119 RSAIVSPWNRKTNNPIYI----------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
R P + + N+ ++ + G+ + + W
Sbjct: 334 RGTPPKPETSNPSTGATVDDYYVNVSVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWK 393
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 394 KINYNGKNGYVSSKFL 409
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 10/133 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R P ++ + +G ++V+ E W +I + +G +G+++ +
Sbjct: 122 VTANVLRVRTQPNTSSAIMGR-VYEGKVLQVIGEDNGWLKI-NHNGKVGYVSSQFVKDSG 179
Query: 120 S--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S N + + P I+ + G ++ + W
Sbjct: 180 SNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVRVTGEVQNWFKIN 239
Query: 172 NLDTEGWIKKQKI 184
+ +I K I
Sbjct: 240 YKGQDAYISKDYI 252
>gi|229115471|ref|ZP_04244877.1| Enterotoxin [Bacillus cereus Rock1-3]
gi|228667884|gb|EEL23320.1| Enterotoxin [Bacillus cereus Rock1-3]
Length = 425
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +T + + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTALGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTG 252
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 AENGWYKINHNGRTGYVSADYV 274
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKQGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 120
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + + T N +N+ P + V G + + +W
Sbjct: 121 GNKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTALGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + T +N+ +++KV+ G +L + W G++
Sbjct: 54 VETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQVIGQENGWFKVSVNGQTGYVS 113
Query: 181 KQKI 184
+
Sbjct: 114 GDFV 117
>gi|163939798|ref|YP_001644682.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|229166861|ref|ZP_04294608.1| Enterotoxin [Bacillus cereus AH621]
gi|163861995|gb|ABY43054.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|228616489|gb|EEK73567.1| Enterotoxin [Bacillus cereus AH621]
Length = 430
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAI-----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
SA+ V N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVT 252
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 GAENGWYKINHNGRTGYVSADFV 275
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTG 118
Query: 119 RSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + ++ T N +N+ P ++ V G + + +W
Sbjct: 119 GNKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFN 178
Query: 174 DTEGWIKKQKI 184
G++ K +
Sbjct: 179 GGTGYVSKDFV 189
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVSVNGQTGYVSGDFV 115
>gi|167636676|ref|ZP_02394965.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|254741204|ref|ZP_05198892.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Kruger
B]
gi|167527903|gb|EDR90722.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKTGYVSSKFL 414
>gi|30261937|ref|NP_844314.1| M24/M37 family peptidase [Bacillus anthracis str. Ames]
gi|47527197|ref|YP_018546.1| M23/37 family peptidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184777|ref|YP_028029.1| M24/M37 family peptidase [Bacillus anthracis str. Sterne]
gi|165873301|ref|ZP_02217908.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167642012|ref|ZP_02400244.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170686620|ref|ZP_02877841.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|170706075|ref|ZP_02896537.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|177655935|ref|ZP_02937109.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190566346|ref|ZP_03019264.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227815277|ref|YP_002815286.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229604634|ref|YP_002866309.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
gi|254721203|ref|ZP_05182993.1| peptidase, M23/M37 family protein [Bacillus anthracis str. A1055]
gi|254734802|ref|ZP_05192514.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254755457|ref|ZP_05207491.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Vollum]
gi|254759993|ref|ZP_05212017.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
Australia 94]
gi|30256563|gb|AAP25800.1| peptidase, M23/M37 family [Bacillus anthracis str. Ames]
gi|47502345|gb|AAT31021.1| peptidase, M23/M37 family [Bacillus anthracis str. 'Ames Ancestor']
gi|49178704|gb|AAT54080.1| peptidase, M23/M37 family [Bacillus anthracis str. Sterne]
gi|164710966|gb|EDR16536.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167510031|gb|EDR85445.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170129077|gb|EDS97942.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|170669696|gb|EDT20438.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|172079920|gb|EDT65026.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190562481|gb|EDV16448.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227006320|gb|ACP16063.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229269042|gb|ACQ50679.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKTGYVSSKFL 414
>gi|65319220|ref|ZP_00392179.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKTGYVSSKFL 414
>gi|182625760|ref|ZP_02953528.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
gi|177909022|gb|EDT71504.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
Length = 553
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---- 114
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++
Sbjct: 336 VKVNSALNMRSGPGSNYGVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVV 393
Query: 115 ---------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ ++ ++ +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVDPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLHNNDKVEIIKEVD 453
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 454 GWYEIKFNGKVGYASKSYI 472
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T VE++KE + W +I+ F+G +G+ +KS +
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGTLHN-NDKVEIIKEVDGWYEIK-FNGKVGYASKSYITIV 475
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-- 170
S + V +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 171 --YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESLSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKRYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S V+ N +N+ P ++ + + I
Sbjct: 308 INENLEDEETNGDIEIEKPSVSVNKKGIVKVN-SALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
>gi|225863866|ref|YP_002749244.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|229184143|ref|ZP_04311352.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
gi|225785902|gb|ACO26119.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|228599258|gb|EEK56869.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 52/138 (37%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYILKND 256
Query: 116 ---------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKSGYVSSKFL 414
>gi|49477429|ref|YP_036074.1| peptidase M23/M37 family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328985|gb|AAT59631.1| peptidase, M23/M37 family, and SH3 domain proteins fusion [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQMNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGQILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GQILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKNGYVSSKFL 414
>gi|118477365|ref|YP_894516.1| M24/M37 family peptidase [Bacillus thuringiensis str. Al Hakam]
gi|196047013|ref|ZP_03114232.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|118416590|gb|ABK85009.1| peptidase, M23/M37 family [Bacillus thuringiensis str. Al Hakam]
gi|196022117|gb|EDX60805.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 52/138 (37%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYILKND 256
Query: 116 ---------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKSGYVSSKFL 414
>gi|126731141|ref|ZP_01746949.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
gi|126708443|gb|EBA07501.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
Length = 723
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 25/148 (16%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR- 119
+ N R GPG Y + T + +G V V + W IR +G GW++ + LS R
Sbjct: 572 NTASLNVRSGPGTQYGRI-TAVDRGTQVTVTGSSDGWSNIRLPNGLTGWVSATYLSSSRP 630
Query: 120 ------SAIVS-----PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
A V+ + + Y+N+ P + I+ +V G + + S W
Sbjct: 631 SAQRQCYATVTNLNPYSSRTRADGSGYLNVRSAPSTRGNILMEVYLGDTVQVVGQSNGWA 690
Query: 169 FGYN------------LDTEGWIKKQKI 184
GW + +
Sbjct: 691 KIQCVSGQCQRPYVGNGGATGWASAKYL 718
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+N +N+ P Q + V+ G +T+ S W GW+ +
Sbjct: 571 DNTASLNVRSGPGTQYGRITAVDRGTQVTVTGSSDGWSNIRLPNGLTGWVSATYL 625
>gi|228933240|ref|ZP_04096096.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228826401|gb|EEM72178.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 564
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQMNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGQILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GQILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKTGYVSSKFL 414
>gi|47569982|ref|ZP_00240645.1| enterotoxin [Bacillus cereus G9241]
gi|47553330|gb|EAL11718.1| enterotoxin [Bacillus cereus G9241]
Length = 402
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 113 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEEQDWFKI-NFNGGTGYVSKDFVTKG 170
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 171 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 231 ENGWYKINHNGRTGYVSADFV 251
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G ++V+ +T+G ++V+ + W ++ +G G+++ ++
Sbjct: 41 TVTADVLNVRSGAGTGHSVISK-VTQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 98
Query: 117 GKRSAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK A V T N +N+ P ++ V G + + +W
Sbjct: 99 GKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEEQDWFKINFNGG 158
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 159 TGYVSKDFV 167
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV G +L + W G++ +
Sbjct: 39 KYTVTADVLNVRSGAGTGHSVISKVTQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 95
>gi|157674088|gb|ABV60160.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 185 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 244
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 245 ENGWYKINHNGRTGYVSADFV 265
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 55 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 112
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 113 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 172
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 173 TGYVSKDFV 181
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 53 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 109
>gi|218903055|ref|YP_002450889.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228926999|ref|ZP_04090065.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228945549|ref|ZP_04107899.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229121485|ref|ZP_04250712.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|218538563|gb|ACK90961.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228661949|gb|EEL17562.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228814067|gb|EEM60338.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228832734|gb|EEM78305.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 564
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKIKHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I+ +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKIK-HNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
++ + +
Sbjct: 399 KINYNGKNAYVSSKFL 414
>gi|164686255|ref|ZP_02210285.1| hypothetical protein CLOBAR_02693 [Clostridium bartlettii DSM
16795]
gi|164601857|gb|EDQ95322.1| hypothetical protein CLOBAR_02693 [Clostridium bartlettii DSM
16795]
Length = 383
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R+ P + T + L KG VE + + NW +I+ ++G G+I K+ S +
Sbjct: 37 GSVNFRVAPNVNSTKI-DKLKKGQTVEYLGKSGNWYKIK-YNGRTGYIYKTYASAVSTTE 94
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
S + K N +NL I+ + G +T+ S W T G++
Sbjct: 95 ASNNSLKYVNCSSLNLRSGAGTNYSIIKVLYKGTNVTVLSSSNGWSKVSVNGTIGYVSST 154
Query: 183 KI 184
+
Sbjct: 155 YL 156
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 16/140 (11%)
Query: 59 TIKA---SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++K S N R G G Y+++ L KG V V+ W ++ +GTIG+++ + L
Sbjct: 99 SLKYVNCSSLNLRSGAGTNYSIIKV-LYKGTNVTVLSSSNGWSKVS-VNGTIGYVSSTYL 156
Query: 116 SGKRSAIVSPWNRKTN----------NPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECS 164
S A + + IN + S ++ ++ + + S
Sbjct: 157 SSASEATEDTSSNNNSSNENVQYYRYTSSKINFRQSSSTSSSVLYQLPKNTKVGVVSTTS 216
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + +T G++ +
Sbjct: 217 TGWAKVKHNNTYGYVSTTYL 236
>gi|225569483|ref|ZP_03778508.1| hypothetical protein CLOHYLEM_05569 [Clostridium hylemonae DSM
15053]
gi|225161691|gb|EEG74310.1| hypothetical protein CLOHYLEM_05569 [Clostridium hylemonae DSM
15053]
Length = 243
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---GKRSAI 122
N R P ++ ++ KG V VV +++ W ++ DF+G G+ + L G S
Sbjct: 122 NVRSKPNTGSAILGSF-KKGDAVTVVSKHDGWFKV-DFNGKQGYCHGGYLDFGKGDPSVT 179
Query: 123 VSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ +P ++ I+ + G + + G+W T G+
Sbjct: 180 ADESTMNDMTTSAPLNVRDRPSMKGKIIGSFKKGETVKVIGQEGDWLKVKYKSTTGYSHV 239
Query: 182 QKI 184
+
Sbjct: 240 DYL 242
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 6/163 (3%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
KI +L + S KE + N R G+ V+
Sbjct: 4 KKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATAN--LNLRDDAGLHGKVI 61
Query: 79 CTYLTKGLPVEVVK-EYENWRQIR--DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ KG VEV W ++ D G ++ + + +
Sbjct: 62 TV-MPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAP 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ KP+ S I+ + G +T+ W +G+
Sbjct: 121 LNVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGY 163
>gi|326803465|ref|YP_004321283.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651737|gb|AEA01920.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 408
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-----NKSLLSGKRSA 121
R GPGI Y + + +G +V++E +W+ I +G GWI N SL + + A
Sbjct: 1 MRNGPGITYDIS-QQIDQGSQYQVLEEKHDWKHIILDNGQSGWIPNWLANDSLANNEEEA 59
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
T +N+Y+ S ++ + I SG+ D GWI +
Sbjct: 60 KAGTGFIATVLSDQVNVYQDDSTNSQVIGQANDNEKYNILYQSGDMINIQYKDDIGWIPQ 119
Query: 182 QKI 184
+I
Sbjct: 120 NQI 122
>gi|228985083|ref|ZP_04145250.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774570|gb|EEM22969.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 422
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G + V+ +T+G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHDVISK-VTQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 117 GKRSAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK A V T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHDVISKVTQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|229160969|ref|ZP_04288958.1| Enterotoxin [Bacillus cereus R309803]
gi|228622537|gb|EEK79374.1| Enterotoxin [Bacillus cereus R309803]
Length = 428
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVNVNGQTGYVSGDFV 115
>gi|222095604|ref|YP_002529661.1| nlp/p60 family protein [Bacillus cereus Q1]
gi|221239662|gb|ACM12372.1| NLP/P60 family protein [Bacillus cereus Q1]
Length = 406
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 113 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 170
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 171 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 231 ENGWYKINHNGRTGYVSADFV 251
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 41 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 98
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 99 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 158
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 159 TGYVSKDFV 167
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 39 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 95
>gi|42781106|ref|NP_978353.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
gi|42737027|gb|AAS40961.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
Length = 426
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTAQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|324326018|gb|ADY21278.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 426
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 117 GKRSAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK A V T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|254684499|ref|ZP_05148359.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
CNEVA-9066]
Length = 535
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKTGYVSSKFL 414
>gi|229155568|ref|ZP_04283676.1| Enterotoxin [Bacillus cereus ATCC 4342]
gi|228627886|gb|EEK84605.1| Enterotoxin [Bacillus cereus ATCC 4342]
Length = 422
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G ++V+ +T+G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VTQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 117 GKRSAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK A V T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVTQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|206977499|ref|ZP_03238394.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217959460|ref|YP_002338012.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|229138685|ref|ZP_04267267.1| Enterotoxin [Bacillus cereus BDRD-ST26]
gi|206744349|gb|EDZ55761.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217063160|gb|ACJ77410.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|228644804|gb|EEL01054.1| Enterotoxin [Bacillus cereus BDRD-ST26]
Length = 426
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|49481179|ref|YP_036119.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218903105|ref|YP_002450939.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228933283|ref|ZP_04096139.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229090967|ref|ZP_04222191.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|229121532|ref|ZP_04250759.1| Enterotoxin [Bacillus cereus 95/8201]
gi|49332735|gb|AAT63381.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218538332|gb|ACK90730.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228661996|gb|EEL17609.1| Enterotoxin [Bacillus cereus 95/8201]
gi|228692368|gb|EEL46103.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|228826444|gb|EEM72221.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 420
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|167632737|ref|ZP_02391063.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170686539|ref|ZP_02877760.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
gi|254684548|ref|ZP_05148408.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254741252|ref|ZP_05198940.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Kruger B]
gi|167531549|gb|EDR94214.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170669615|gb|EDT20357.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
Length = 420
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|228927046|ref|ZP_04090112.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|254721306|ref|ZP_05183096.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. A1055]
gi|228832781|gb|EEM78352.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 418
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 189 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 248
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 249 ENGWYKINHNGRTGYVSADFV 269
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 59 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 116
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 117 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 176
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 177 TGYVSKDFV 185
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 57 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 113
>gi|300117554|ref|ZP_07055341.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
gi|298725089|gb|EFI65744.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
Length = 420
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G IG+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGIGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 IGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|56421790|ref|YP_149108.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
gi|56381632|dbj|BAD77540.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
Length = 446
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
+ A + N R GPG+ Y + +G +++ + W I GWI ++
Sbjct: 36 AVVTADQVNVRQGPGVPYR-PLANVHRGEAYRLIEVKDGWVNIEWKPNRTGWIAARYVAL 94
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K +AIV + L ++P I+ + G + I + GEW
Sbjct: 95 AKETAIV--------QENRLRLRQEPSRDGRIIGHLARGETVWIIKEDGEWTEVIADGAI 146
Query: 177 GWIKKQKI 184
GW+ +
Sbjct: 147 GWVSSAYL 154
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 56 RFVTIKA-------SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
R+V + +R R P ++ +L +G V ++KE W ++ DG IG
Sbjct: 90 RYVALAKETAIVQENRLRLRQEPSRDGRIIG-HLARGETVWIIKEDGEWTEVI-ADGAIG 147
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W++ + L+ R + +S N +N+ +P +++ V ++ G + I E W
Sbjct: 148 WVSSAYLTAARESSIS-HQTGIVNASSLNVRAEPSLKAARVGRLVRGEEVEIVEKKPGWY 206
Query: 169 FGYNL-DTEGWIKKQKI 184
+ +GW+ +
Sbjct: 207 KIASQTGLDGWVSSAYV 223
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I AI + + L + E I + + + AS N R P + V + G
Sbjct: 140 VIADGAIGWVSSAYLTAARESSISHQTGI-----VNASSLNVRAEPSLKAARVGRLVR-G 193
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
VE+V++ W +I G GW++ + +
Sbjct: 194 EEVEIVEKKPGWYKIASQTGLDGWVSSAYV 223
>gi|168206724|ref|ZP_02632729.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
gi|170661865|gb|EDT14548.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
Length = 553
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
+K + A N R GPG Y V+ T L VE++KE + W +I+ F+G G+++ +
Sbjct: 336 VKVNSALNMRSGPGSNYVVIGT-LRNNDEVEIIKEVDGWYEIK-FNGKSGYVSSQYIKVL 393
Query: 117 ------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
K S V+ N +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVN-SALNMRSGPGSNYGVIGTLCNNDKVEIIKEV 452
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 453 DGWYEIRFNGKVGYASKSYI 472
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+K + A N R GPG Y V+ T L VE++KE + W +IR F+G +G+ +KS +
Sbjct: 418 VKVNSALNMRSGPGSNYGVIGT-LCNNDKVEIIKEVDGWYEIR-FNGKVGYASKSYITLV 475
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-- 170
S + V +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 171 --YNLDTEGWIKKQKI 184
G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 22/144 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINKSLLS- 116
AS N R P +V L + V + +E W +I DG G+++K +S
Sbjct: 249 NASVLNVRESPSTSGRIV-HKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYISI 307
Query: 117 ----------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
K S + +N+ P +++ + + I
Sbjct: 308 INENPEDEETNGDIEIEKPSV-SANKKGIVKVNSALNMRSGPGSNYVVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ Q I
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYI 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE---GWIKKQ 182
K N +N+ + P IV K+ ++ I E W Y + G++ K
Sbjct: 244 QGKVTNASVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKD 303
Query: 183 KI 184
I
Sbjct: 304 YI 305
>gi|58802526|gb|AAW82450.1| enterotoxin FM [Bacillus mycoides]
Length = 285
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 45 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDYVTKG 102
Query: 119 RSAI-----------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
SA+ V N + + P + ++ V G +L +
Sbjct: 103 GSAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVT 162
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 163 GAENGWYKINHNGRTGYVSADFV 185
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 37/100 (37%), Gaps = 6/100 (6%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-----TNNPIYINLYKKPDI 144
V+ + W ++ +G G+++ ++ + + ++ T N +N+ P
Sbjct: 1 VIGQENGWFKVS-VNGQTGYVSGDFVTTGGNKGTTTTVQQGTGTYTVNVSSLNVRTGPSA 59
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G + + +W G++ K +
Sbjct: 60 SHTVLGSVNKGKTVQVVGEVQDWFKINFNGGTGYVSKDYV 99
>gi|42784398|ref|NP_981645.1| enterotoxin [Bacillus cereus ATCC 10987]
gi|42740330|gb|AAS44253.1| enterotoxin [Bacillus cereus ATCC 10987]
Length = 582
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NHNGKTGFVSGEFVSKN 107
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 108 GASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 295 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFVKFVK 352
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 353 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 412
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 413 WSKINYNGQTGYIGTRYL 430
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 21/145 (14%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V N + + P ++ V G L
Sbjct: 264 GSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLN 323
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
+ G W G++ + +
Sbjct: 324 VIGSEGSWFKVNYQGKTGYVSSEFV 348
>gi|297544301|ref|YP_003676603.1| NLP/P60 protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296842076|gb|ADH60592.1| NLP/P60 protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 306
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+IF ++++ + E + + I + N R + +V+ T L
Sbjct: 8 MIFVISVFGATLIGSSFLSPVFA-EGLGIGK---ITGNYVNVRTQGSLAGSVI-TQLNWN 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-----NNPIYINLYK 140
V V+ + W +I+ +G GW+ LS + + VS + + Y+N+
Sbjct: 63 DTVTVLDKQNGWYKIKLSNGREGWVFGKYLSVRSFSNVSRGDTENLSVGIVTGNYVNVRS 122
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
K + I+ ++ +T+ + W + EGWI Q +
Sbjct: 123 KGSLSGSIITQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYL 167
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R + +++ T L K V V+ + W +I+ DG GWI L+ +
Sbjct: 113 VTGNYVNVRSKGSLSGSII-TQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYLAVRS 171
Query: 120 SAIVSPWNRKTNNPIYINLYKK 141
++ +S + + Y K
Sbjct: 172 TSNISRGEVDRSLVDRLIDYAK 193
>gi|167040922|ref|YP_001663907.1| peptidase S8/S53 subtilisin kexin sedolisin [Thermoanaerobacter sp.
X514]
gi|300913869|ref|ZP_07131186.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X561]
gi|307725447|ref|YP_003905198.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X513]
gi|166855162|gb|ABY93571.1| peptidase S8 and S53, subtilisin, kexin, sedolisin
[Thermoanaerobacter sp. X514]
gi|300890554|gb|EFK85699.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X561]
gi|307582508|gb|ADN55907.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X513]
Length = 1776
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KA N R G V+ L +G V +++E W +I +++G G+I ++
Sbjct: 1584 VKALALNVREGASTSTKVIGV-LPRGTVVTLLEEVNGWYKI-NYNGKTGYIYGVYVTVMP 1641
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S+ S +N+ ++ + ++ + G ++T+ E W G+I
Sbjct: 1642 SS--SEVKTGRVTASVLNVREEASTSTKVIGTLSKGTVVTLLEEVNGWYKINYNGKIGYI 1699
Query: 180 KKQKI 184
+ +
Sbjct: 1700 YGKYV 1704
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+ AS N R V+ T L+KG V +++E W +I +++G IG+I +
Sbjct: 1651 VTASVLNVREEASTSTKVIGT-LSKGTVVTLLEEVNGWYKI-NYNGKIGYIYGKYVDVIS 1708
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ + + V G L + W G
Sbjct: 1709 SSSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFG 1768
Query: 178 WIKKQ 182
++ +
Sbjct: 1769 YVYAK 1773
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S + P + + +N+ + + ++ + G ++T+ E W
Sbjct: 1565 GKTISVNVTVKEKPQLQGVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKIN 1624
Query: 172 NLDTEGWIKKQKIWGIY 188
G+I +G+Y
Sbjct: 1625 YNGKTGYI-----YGVY 1636
>gi|167036574|ref|YP_001664152.1| hypothetical protein Teth39_0143 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115002|ref|YP_004185161.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166855408|gb|ABY93816.1| protein of unknown function DUF1034 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928093|gb|ADV78778.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 1776
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KA N R G V+ L +G V +++E W +I +++G G+I ++
Sbjct: 1584 VKALALNVREGASTSTKVIGV-LPRGTVVTLLEEVNGWYKI-NYNGKTGYIYGVYVTVMP 1641
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S+ S +N+ ++ + ++ + G ++T+ E W G+I
Sbjct: 1642 SS--SEVKTGRVTASVLNVREEASTSTKVIGTLSKGTVVTLLEEVNGWYKINYNGKIGYI 1699
Query: 180 KKQKI 184
+ +
Sbjct: 1700 YGKYV 1704
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+ AS N R V+ T L+KG V +++E W +I +++G IG+I +
Sbjct: 1651 VTASVLNVREEASTSTKVIGT-LSKGTVVTLLEEVNGWYKI-NYNGKIGYIYGKYVDVIS 1708
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ + + V G L + W G
Sbjct: 1709 SSSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFG 1768
Query: 178 WIKKQ 182
++ +
Sbjct: 1769 YVYAK 1773
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S + P + + +N+ + + ++ + G ++T+ E W
Sbjct: 1565 GKTISVNVTVKEKPQLQGVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKIN 1624
Query: 172 NLDTEGWIKKQKIWGIY 188
G+I +G+Y
Sbjct: 1625 YNGKTGYI-----YGVY 1636
>gi|220929375|ref|YP_002506284.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219999703|gb|ACL76304.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 296
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 22/158 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
IF ++ + ++A S + I+ + N R GP +++ K
Sbjct: 13 IFAFSLVLVCSAVMAASQAAQ------------IQGTGVNVRKGPNTSASIITKLSNKR- 59
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V V+ + W +I FDG GW++ I + + N +N + D S
Sbjct: 60 -VSVLDKSSGWYKIS-FDGKTGWVSDDY-------IKVLATKGSINANGVNFREGADTSS 110
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I++ ++ G + I + EW G++ K+ +
Sbjct: 111 KIISSLKKGTSIQILDTLTEWHKIKVGSKVGYVSKKFV 148
>gi|218235463|ref|YP_002366626.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|218163420|gb|ACK63412.1| peptidase, M23/M37 family [Bacillus cereus B4264]
Length = 564
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIPKDTKHEQTTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P + ++ + +G ++V+ E +W +I + G G+++ +SG + VS
Sbjct: 61 PNMSSAIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSGNNVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 119 SKTVTANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKINHNGEVGYVSSQFV 175
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ S R GP + ++ + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHAILGSIH-KGQVVQVTGEIQDWVKI-NYSGQTAYISKDYISKSG 256
Query: 119 ------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
++ V N + + P ++ V G +L +
Sbjct: 257 SNANVDQTNEQQKNVTVQTDGTYIVNATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 51/161 (31%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSGNNVSAKTNVSMSRSKTVTANVLRVRTQPNTSSAIMGRVYEGKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL--------SGKRSAIVSPWNRKTNNPIYINLYKKPD 143
E W +I + +G +G+++ + + N + + P
Sbjct: 153 GEENGWLKI-NHNGEVGYVSSQFVIDGSSNGSDNNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G ++ + +W +I K I
Sbjct: 212 TSHAILGSIHKGQVVQVTGEIQDWVKINYSGQTAYISKDYI 252
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 19/139 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A+ R GP ++V+ L G ++V W +I + +G G+++ +
Sbjct: 281 VNATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 116 SGKRSAIVSPWNRKTNNPIYINLY----------KKPDIQSIIVAKVEPGVLLTIRECSG 165
G S P + + Y ++ + G+ + +
Sbjct: 339 GGTPS---KPETSNLSTGATVGDYYVNVNVLNVRNGAGTNHGVIGALSKGIKVQVLFEQN 395
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 396 GWLKINYNGKNGYVSSEFL 414
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ +V N+ T N + + +P++ S I+ +V G +L + W + G++
Sbjct: 39 TDVVKYENQVTVNTNALRVRTQPNMSSAIMGRVYEGEVLQVIGEENSWLKINHKGKTGYV 98
Query: 180 KKQKIWG 186
+ + G
Sbjct: 99 SSEFVSG 105
>gi|218514510|ref|ZP_03511350.1| hypothetical protein Retl8_12802 [Rhizobium etli 8C-3]
Length = 45
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 1 AKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 45
>gi|229017292|ref|ZP_04174196.1| Enterotoxin [Bacillus cereus AH1273]
gi|229023468|ref|ZP_04179965.1| Enterotoxin [Bacillus cereus AH1272]
gi|228737821|gb|EEL88320.1| Enterotoxin [Bacillus cereus AH1272]
gi|228743993|gb|EEL94091.1| Enterotoxin [Bacillus cereus AH1273]
Length = 449
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK----------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNQTQQPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTG 252
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 AENGWYKINHNGRTGYVSADFV 274
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--S 116
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ + S
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVS-VNGQTGYVSGDFVTTS 118
Query: 117 GKRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G + + T N +N+ P ++ V G + + +W
Sbjct: 119 GNKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFN 178
Query: 174 DTEGWIKKQKI 184
G++ K +
Sbjct: 179 GGTGYVSKDFV 189
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVSVNGQTGYVSGDFV 115
>gi|157674095|gb|ABV60163.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 189 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 248
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 249 ENGWYKINHNGRTGYVSADFV 269
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 59 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 116
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 117 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 176
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 177 TGYVSKDFV 185
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 57 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 113
>gi|218232041|ref|YP_002366676.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
gi|218159998|gb|ACK59990.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
Length = 413
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|301056698|ref|YP_003794909.1| putative lipoprotein [Bacillus anthracis CI]
gi|300378867|gb|ADK07771.1| putative lipoproteins NlpC/P60 family [Bacillus cereus biovar
anthracis str. CI]
Length = 580
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I+ + +
Sbjct: 411 WSKINYNGQTGYIRTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPVSGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229150214|ref|ZP_04278436.1| Enterotoxin [Bacillus cereus m1550]
gi|228633333|gb|EEK89940.1| Enterotoxin [Bacillus cereus m1550]
Length = 431
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|218906410|ref|YP_002454244.1| enterotoxin [Bacillus cereus AH820]
gi|218538665|gb|ACK91063.1| enterotoxin [Bacillus cereus AH820]
Length = 598
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|228917841|ref|ZP_04081378.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228841777|gb|EEM86887.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 584
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|228948953|ref|ZP_04111226.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228810709|gb|EEM57057.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 578
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229094336|ref|ZP_04225410.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|228689014|gb|EEL42839.1| Enterotoxin [Bacillus cereus Rock3-42]
Length = 580
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229124741|ref|ZP_04253921.1| Enterotoxin [Bacillus cereus 95/8201]
gi|228658718|gb|EEL14378.1| Enterotoxin [Bacillus cereus 95/8201]
Length = 587
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|196036331|ref|ZP_03103729.1| putative cell wall hydrolase [Bacillus cereus W]
gi|228930235|ref|ZP_04093244.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|195991123|gb|EDX55093.1| putative cell wall hydrolase [Bacillus cereus W]
gi|228829520|gb|EEM75148.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 580
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|157674081|gb|ABV60157.1| enterotoxin FM [Bacillus cereus]
Length = 395
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 125 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 182
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 183 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 242
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 243 ENGWYKINHNGRAGYVSADFV 263
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 53 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 110
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 111 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 170
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 171 TGYVSKDFV 179
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 51 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 107
>gi|229029681|ref|ZP_04185756.1| Enterotoxin [Bacillus cereus AH1271]
gi|228731623|gb|EEL82530.1| Enterotoxin [Bacillus cereus AH1271]
Length = 426
Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + T +N+ +++KV+ G +L + W G++
Sbjct: 52 VETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQENGWFKVTVNGQTGYVS 111
Query: 181 KQKI 184
+
Sbjct: 112 GDFV 115
>gi|228939118|ref|ZP_04101713.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971995|ref|ZP_04132613.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978605|ref|ZP_04138978.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228781101|gb|EEM29306.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228787709|gb|EEM35670.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228820541|gb|EEM66571.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326939695|gb|AEA15591.1| enterotoxin [Bacillus thuringiensis serovar chinensis CT-43]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|49478923|ref|YP_039224.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49330479|gb|AAT61125.1| cell wall hydrolase; possible N-acetylmuramoyl-L-alanine amidase
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 580
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|114330674|ref|YP_746896.1| hypothetical protein Neut_0659 [Nitrosomonas eutropha C91]
gi|114307688|gb|ABI58931.1| protein of unknown function DUF1058 [Nitrosomonas eutropha C91]
Length = 159
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M L + T + F L + +E + + F++I S P +
Sbjct: 1 MRLQLFRAGFVTAGLLFPLLFFSCKAIAQEGSQNE----FLSIATSATILYDAPSLNAGK 56
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + LP+EVV + W ++RD+ G + W+ LS KR IV+
Sbjct: 57 LYV-ASVNLPLEVVVKVVGWVKVRDYHGYLAWVEDKNLSPKRFVIVNASVGS-------- 107
Query: 138 LYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTE-GWIKKQKIWGI 187
+Y+ PD S +V + V+L + + W + D + G+I+ ++WG+
Sbjct: 108 VYQSPDQNSSLVFQARQDVVLEWLGAAANGWVKVKHQDGQVGYIRTDQVWGV 159
>gi|52143465|ref|YP_083364.1| NLP/P60 family protein [Bacillus cereus E33L]
gi|51976934|gb|AAU18484.1| NLP/P60 family protein [Bacillus cereus E33L]
Length = 420
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRAGYVSADFV 271
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|228900577|ref|ZP_04064799.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
gi|228859060|gb|EEN03498.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|228907704|ref|ZP_04071560.1| Enterotoxin [Bacillus thuringiensis IBL 200]
gi|228851937|gb|EEM96735.1| Enterotoxin [Bacillus thuringiensis IBL 200]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|228964970|ref|ZP_04126072.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228794711|gb|EEM42215.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|229079160|ref|ZP_04211709.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|229109445|ref|ZP_04239039.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228674012|gb|EEL29262.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228704177|gb|EEL56614.1| Enterotoxin [Bacillus cereus Rock4-2]
Length = 432
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 139 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 196
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 197 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 256
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 257 ENGWYKINHNGRTGYVSADFV 277
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 67 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 124
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 125 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 184
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 185 TGYVSKDFV 193
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 65 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 121
>gi|229069530|ref|ZP_04202819.1| Enterotoxin [Bacillus cereus F65185]
gi|229178386|ref|ZP_04305755.1| Enterotoxin [Bacillus cereus 172560W]
gi|229190084|ref|ZP_04317090.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228593413|gb|EEK51226.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228605116|gb|EEK62568.1| Enterotoxin [Bacillus cereus 172560W]
gi|228713669|gb|EEL65555.1| Enterotoxin [Bacillus cereus F65185]
Length = 428
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|218896941|ref|YP_002445352.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
gi|218541564|gb|ACK93958.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
Length = 432
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|206970725|ref|ZP_03231677.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228952357|ref|ZP_04114445.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|229043746|ref|ZP_04191448.1| Enterotoxin [Bacillus cereus AH676]
gi|60202511|gb|AAX14641.1| enterotoxin FM [Bacillus cereus]
gi|206734361|gb|EDZ51531.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228725599|gb|EEL76854.1| Enterotoxin [Bacillus cereus AH676]
gi|228807353|gb|EEM53884.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 426
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRTGYVSADFV 271
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|30020092|ref|NP_831723.1| enterotoxin [Bacillus cereus ATCC 14579]
gi|229127388|ref|ZP_04256383.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|29895642|gb|AAP08924.1| Enterotoxin [Bacillus cereus ATCC 14579]
gi|228656070|gb|EEL11913.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 194
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 195 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 254
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 255 ENGWYKINHNGRTGYVSADFV 275
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 65 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 122
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 123 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 182
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 183 TGYVSKDFV 191
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 63 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 119
>gi|52140330|ref|YP_086500.1| N-acetylmuramoyl-L-alanine amidase; enterotoxin [Bacillus cereus
E33L]
gi|51973799|gb|AAU15349.1| N-acetylmuramoyl-L-alanine amidase; possible enterotoxin [Bacillus
cereus E33L]
Length = 579
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGQTGFVSGEFVSKN 107
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 108 GASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|118477409|ref|YP_894560.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|196036870|ref|ZP_03104257.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196047052|ref|ZP_03114271.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225863914|ref|YP_002749292.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228914573|ref|ZP_04078182.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228945596|ref|ZP_04107946.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229184189|ref|ZP_04311398.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|118416634|gb|ABK85053.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|195990523|gb|EDX54504.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196022156|gb|EDX60844.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225786426|gb|ACO26643.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228599304|gb|EEK56915.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|228814114|gb|EEM60385.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228844892|gb|EEM89934.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 420
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRAGYVSADFV 271
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|118480273|ref|YP_897424.1| cell wall hydrolase, N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis str. Al Hakam]
gi|196045737|ref|ZP_03112967.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|229187452|ref|ZP_04314594.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|118419498|gb|ABK87917.1| cell wall hydrolase, possible N-acetylmuramoyl-L-alanine amidase
[Bacillus thuringiensis str. Al Hakam]
gi|196023568|gb|EDX62245.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|228595973|gb|EEK53651.1| Enterotoxin [Bacillus cereus BGSC 6E1]
Length = 580
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 107
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ + + + + + P+ S + +V G L + W +
Sbjct: 108 GTSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNSNNKESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ V N + + P ++ V G L +
Sbjct: 264 GSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229196202|ref|ZP_04322951.1| Enterotoxin [Bacillus cereus m1293]
gi|228587267|gb|EEK45336.1| Enterotoxin [Bacillus cereus m1293]
Length = 422
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRAGYVSADFV 273
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 117
>gi|196041886|ref|ZP_03109174.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
gi|196027258|gb|EDX65877.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
Length = 418
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 188
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 189 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 248
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 249 ENGWYKINHNGRAGYVSADFV 269
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 59 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 116
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 117 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 176
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 177 TGYVSKDFV 185
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 57 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 113
>gi|228920686|ref|ZP_04084029.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228838987|gb|EEM84285.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 428
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 192
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 193 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 252
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 253 ENGWYKINHNGRTGYVSADFV 273
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + G ++VV + W ++ + +G G+++ ++
Sbjct: 63 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVVGQENGWFKV-NVNGQTGYVSGDFVTTG 120
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 121 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 180
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 181 TGYVSKDFV 189
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 61 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 117
>gi|324329179|gb|ADY24439.1| enterotoxin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 581
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NMNGQTGFVSGEFVSKN 107
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 108 GANNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 48/135 (35%), Gaps = 12/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 295 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 352
Query: 120 SAIVSPWNRKTNN----------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+P K N +N+ I+ + G + + + W
Sbjct: 353 GGTTTPEQPKQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSK 412
Query: 170 GYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 413 INYNGQTGYIGTRYL 427
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNNNNQESVKPTSGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 21/143 (14%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V N + + P ++ V G L
Sbjct: 264 GSSDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLN 323
Query: 160 IRECSGEWCFGYNLDTEGWIKKQ 182
+ G W G++ +
Sbjct: 324 VIGSEGSWFKVNYQGKTGYVSSE 346
>gi|157674090|gb|ABV60161.1| enterotoxin FM [Bacillus cereus]
Length = 397
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVSEVQDWFKI-NFNGGTGYVSKDFVTKG 184
Query: 119 RSAI---------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ V N + + P ++++ V G +L +
Sbjct: 185 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNVVIGGVTNGTVLNVTGA 244
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 245 ENGWYKINHNGRTGYVSADFV 265
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 55 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 112
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 113 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 172
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 173 TGYVSKDFV 181
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 53 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 109
>gi|332980611|ref|YP_004462052.1| NLP/P60 protein [Mahella australiensis 50-1 BON]
gi|332698289|gb|AEE95230.1| NLP/P60 protein [Mahella australiensis 50-1 BON]
Length = 304
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 26/176 (14%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K + ++I I+ + A++ + T+ S R P +++
Sbjct: 5 KKAVAAAIISAGFIFSSVFGTSAMAASQG-----------TVTGSGVRLRSKPSTSSSIL 53
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----------SGKRSAIVSPWNR 128
T KG V V + NW + F+G GW++ + S +A+ W
Sbjct: 54 -TNAYKGDKVTVKDKSGNWYNVV-FNGKAGWMSADYIKISSGSIATASRGNTAVAPGWVT 111
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L K P + + G +T+ W + GW + I
Sbjct: 112 ANGG---LILRKSPSTSGARITVMPKGSQVTVLSEENGWSQVKYGNYSGWASSKYI 164
>gi|6224908|gb|AAF06006.1| enterotoxin [Bacillus cereus]
Length = 431
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 138 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 195
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 196 GSAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 255
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 256 ENGWYKINHNGRTGYVSADFV 276
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 6/130 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLSG 117
T+ A N R G G + V+ + G ++V + W ++ + +G G+++ ++
Sbjct: 65 TVTADVLNVRSGAGTGHNVISK-VKSGQVLQVSWDKKNGWFKV-NVNGQTGYVSGDFVTT 122
Query: 118 KRSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ T N +N+ P ++ V G + + +W
Sbjct: 123 GGKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNG 182
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 183 GTGYVSKDFV 192
>gi|6224906|gb|AAF06005.1| enterotoxin [Bacillus cereus]
Length = 419
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 190
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
SA+ + + N + + P + ++ V G +L +
Sbjct: 191 GSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 250
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 ENGWYKINHNGRAGYVSADFV 271
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|229158797|ref|ZP_04286855.1| Enterotoxin [Bacillus cereus ATCC 4342]
gi|228624781|gb|EEK81550.1| Enterotoxin [Bacillus cereus ATCC 4342]
Length = 578
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFTKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|157674083|gb|ABV60158.1| enterotoxin FM [Bacillus cereus]
Length = 401
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + + KG V+VV E ++W +I +F+G G+++K ++
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGS-VNKGKTVQVVGEVQDWFKI-NFNGGTGYVSKDFVTKG 186
Query: 119 RSAIVSPWNRK---------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
A+ + + N + + P + ++ V G +L +
Sbjct: 187 GPAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGA 246
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 247 ENGWYKINHNGRTGYVSADFV 267
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ A N R G G ++V+ +T+G ++V+ + W ++ +G G+++ ++
Sbjct: 57 TVTADVLNVRSGAGTGHSVISK-VTQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 114
Query: 117 GKRSAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
GK A V T N +N+ P ++ V G + + +W
Sbjct: 115 GKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGG 174
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 175 TGYVSKDFV 183
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV G +L + W G++ +
Sbjct: 55 KYTVTADVLNVRSGAGTGHSVISKVTQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 111
>gi|295705177|ref|YP_003598252.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
gi|294802836|gb|ADF39902.1| N-acetylmuramoyl-L-alanine amidase cwlB (Cell wall hydrolase)
(Autolysin) [Bacillus megaterium DSM 319]
Length = 429
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ A+ N R P +V +TKG V++V E + W +I ++G WI+ ++
Sbjct: 33 AKVTATSLNVRATPSTSGAIVGK-ITKGNTVDIVDESKGWAKIT-YNGKEAWISSQYINK 90
Query: 118 KR----SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+ S S N +N+ + IV + +T+ + SG W
Sbjct: 91 TQINSTSTANSASKSAVINASSLNVRSSASTSASIVTNLPRNSKVTVVKESGSWSQVKTA 150
Query: 173 LDTEGWIKKQKI 184
GW+ Q +
Sbjct: 151 SGQTGWVASQYL 162
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 3/127 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I AS N R ++V T L + V VVKE +W Q++ G GW+ L
Sbjct: 106 AVINASSLNVRSSASTSASIV-TNLPRNSKVTVVKESGSWSQVKTASGQTGWVASQYL-Q 163
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
S S + NL +P + + I+ + G + +W Y+
Sbjct: 164 TGSGQSSQTAQSIQITKASNLRTQPSLSAGIIRVAKAGERFKKVNETNDWVQIQYSASQT 223
Query: 177 GWIKKQK 183
W+ K
Sbjct: 224 AWVSKGL 230
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV K+ G + I + S W E WI Q I
Sbjct: 29 AAESAKVTATSLNVRATPSTSGAIVGKITKGNTVDIVDESKGWAKITYNGKEAWISSQYI 88
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 59 TIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+I+ ++A N R P + ++ G + V E +W QI+ W++K L +
Sbjct: 175 SIQITKASNLRTQPSLSAGIIRV-AKAGERFKKVNETNDWVQIQYSASQTAWVSKGLTAA 233
>gi|228936521|ref|ZP_04099317.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228823109|gb|EEM68945.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 577
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R GP ++V+ L G + V+ +W ++ ++ G G+++ +
Sbjct: 293 VNAISLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFTKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N I + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNAISLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|323705756|ref|ZP_08117329.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534974|gb|EGB24752.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 1208
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G G Y V+ + G + ++ E + W QI ++G G++ ++
Sbjct: 1083 VTASALNVRSGAGTNYKVIGV-VRAGQSINIIGENDGWYQIE-YNGKTGYVYGKYVASSP 1140
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + + K +N+ I ++ + V G L + W G
Sbjct: 1141 DLTNVAVLKSVKVTAKDGLNIRVNNSINALKIGAVPYGYELKVVGEYDGWYKVLYNGVYG 1200
Query: 178 WIKKQ 182
++ +
Sbjct: 1201 FVYAK 1205
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 22/74 (29%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N +S + ++ +N+ ++ V G + I + W
Sbjct: 1063 NYWTISKTPVLEGNVGSKGIVTASALNVRSGAGTNYKVIGVVRAGQSINIIGENDGWYQI 1122
Query: 171 YNLDTEGWIKKQKI 184
G++ + +
Sbjct: 1123 EYNGKTGYVYGKYV 1136
>gi|228988457|ref|ZP_04148548.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771313|gb|EEM19788.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 578
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFTKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229199349|ref|ZP_04326014.1| Enterotoxin [Bacillus cereus m1293]
gi|228584063|gb|EEK42216.1| Enterotoxin [Bacillus cereus m1293]
Length = 579
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NMNGQTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
I +P K N +N+ I+ + G + + +
Sbjct: 351 GGITTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|229118726|ref|ZP_04248077.1| Enterotoxin [Bacillus cereus Rock1-3]
gi|228664694|gb|EEL20185.1| Enterotoxin [Bacillus cereus Rock1-3]
Length = 576
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G ++ G + V+ E W +I + +G G+++ +S K
Sbjct: 51 TVNADVLHVRAGSSTSQDIISRVYN-GQSLNVIGEENGWFKI-NHNGKTGFVSGEFVSKK 108
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 109 GATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 168
Query: 176 EGWIKKQKIWGIYPG 190
G++ Q + G+
Sbjct: 169 TGYVSGQFVSGVSAN 183
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSEGSWFKV-NYQGKTGFVSGEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 408 WSKINYNGQNGYI 420
Score = 54.6 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQTGYVSGQFVSGVS 181
Query: 118 KRSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N++T P + + P VA + G ++ + +W
Sbjct: 182 ANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
+I K +
Sbjct: 242 KINYAGQAAYISKDYL 257
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 19/138 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V +TKG V+VV E ++W +I ++ G +I+K L+
Sbjct: 203 TVNVSSLRVRTGPSTSHTTV-ASITKGQVVQVVGEVQDWFKI-NYAGQAAYISKDYLTKG 260
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 261 GSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVV 320
Query: 162 ECSGEWCFGYNLDTEGWI 179
G W G++
Sbjct: 321 GSEGSWFKVNYQGKTGFV 338
>gi|71906254|ref|YP_283841.1| hypothetical protein Daro_0614 [Dechloromonas aromatica RCB]
gi|71845875|gb|AAZ45371.1| Protein of unknown function DUF1058 [Dechloromonas aromatica RCB]
Length = 149
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 22/162 (13%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+A+ A A + + + +I A P + + P
Sbjct: 8 VLVALSMLGAAGAASAID-----------YRSINVPAAILYDAPSQQGKKLYLIKAQ-TP 55
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
VEVV E W ++RD +GT+ W+ +S +R +V+ + + ++
Sbjct: 56 VEVVVRLEGWFKVRDAEGTLAWVESRNVSERRMLVVTSP--------RAEIRQADKAEAA 107
Query: 148 IVAKVEPGVLLT-IRECSGEWCFGYN-LDTEGWIKKQKIWGI 187
++A+++ V + + S W + G+I+ ++WG+
Sbjct: 108 VLAELDKWVAVEFVESASPGWAKVRHRDGATGYIRSTQVWGL 149
>gi|302877468|ref|YP_003846032.1| hypothetical protein Galf_0223 [Gallionella capsiferriformans ES-2]
gi|302580257|gb|ADL54268.1| protein of unknown function DUF1058 [Gallionella capsiferriformans
ES-2]
Length = 150
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + LA L +L + + +VT+ + A P + +
Sbjct: 1 MRYPAVLRLASLCTLLCVLGAAQAVD---------YVTVGEASAILYDAPSLKAKKLFV- 50
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+++ +P E + +NW ++RD G + W+ K L+ K+ +V P +++ +
Sbjct: 51 VSRYMPFEAIVTLDNWVKVRDRTGGLYWLEKHALTNKKYVVVI--------PPLVDVRAE 102
Query: 142 PDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN-LDTEGWIKKQKIWG 186
PD + V +V V L E +G W + G+++ ++WG
Sbjct: 103 PDEGAARVCQVRAQVALEWFESTGTGWIKVRHKDGETGFVRSSEVWG 149
>gi|229099661|ref|ZP_04230588.1| Enterotoxin [Bacillus cereus Rock3-29]
gi|228683731|gb|EEL37682.1| Enterotoxin [Bacillus cereus Rock3-29]
Length = 578
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G ++ G + V+ E W +I + +G G+++ +S K
Sbjct: 51 TVNADVLHVRAGSSTSQDIISRVYN-GQSLNVIGEENGWFKI-NHNGKTGFVSGEFVSKK 108
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 109 GATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 168
Query: 176 EGWIKKQKIWGIYPG 190
G++ Q + G+
Sbjct: 169 TGYVSGQFVSGVSAN 183
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSEGSWFKV-NYQGKTGFVSGEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 408 WSKINYNGQNGYI 420
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQTGYVSGQFVSGVS 181
Query: 118 KRSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N++T P + + P VA + G ++ + +W
Sbjct: 182 ANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
+I K +
Sbjct: 242 KINYAGQAAYISKDYV 257
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 19/138 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHTTV-ASITKGQVVQVVGEVQDWFKI-NYAGQAAYISKDYVTKG 260
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 261 GSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVV 320
Query: 162 ECSGEWCFGYNLDTEGWI 179
G W G++
Sbjct: 321 GSEGSWFKVNYQGKTGFV 338
>gi|229105838|ref|ZP_04236465.1| Enterotoxin [Bacillus cereus Rock3-28]
gi|228677559|gb|EEL31809.1| Enterotoxin [Bacillus cereus Rock3-28]
Length = 578
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G ++ G + V+ E W +I + +G G+++ +S K
Sbjct: 51 TVNADVLHVRAGSSTSQDIISRVYN-GQSLNVIGEENGWFKI-NHNGKTGFVSGEFVSKK 108
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + + P+ S + +V G L + W +
Sbjct: 109 GATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 168
Query: 176 EGWIKKQKIWGIYPG 190
G++ Q + G+
Sbjct: 169 TGYVSGQFVSGVSAN 183
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSEGSWFKV-NYQGKTGFVSGEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 408 WSKINYNGQNGYI 420
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQTGYVSGQFVSGVS 181
Query: 118 KRSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N++T P + + P VA + G ++ + +W
Sbjct: 182 ANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
+I K +
Sbjct: 242 KINYAGQAAYISKDYV 257
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 19/138 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHTTV-ASITKGQVVQVVGEVQDWFKI-NYAGQAAYISKDYVTKG 260
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 261 GSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVV 320
Query: 162 ECSGEWCFGYNLDTEGWI 179
G W G++
Sbjct: 321 GSEGSWFKVNYQGKTGFV 338
>gi|163847149|ref|YP_001635193.1| NLP/P60 protein [Chloroflexus aurantiacus J-10-fl]
gi|222524986|ref|YP_002569457.1| NLP/P60 protein [Chloroflexus sp. Y-400-fl]
gi|163668438|gb|ABY34804.1| NLP/P60 protein [Chloroflexus aurantiacus J-10-fl]
gi|222448865|gb|ACM53131.1| NLP/P60 protein [Chloroflexus sp. Y-400-fl]
Length = 536
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R T++ N R GPG Y V LT G + +V+++ W + G GW+ L
Sbjct: 236 RVATVREDGLNLRDGPGTNY-VSMKRLTAGQELNLVEQFNGWFLVE-TGGLFGWVTSEFL 293
Query: 116 SGKRSAI-----------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + +P + +NL K P + V G + +
Sbjct: 294 TIAPGVVERVPVAASIPDPNPPLVGSVLENSVNLRKGPGSAYERIGAVNAGTEVKLLARH 353
Query: 165 GEWCFGY-NLDTEGWIKKQKIWGIYP 189
+W T+ W+ + + G+ P
Sbjct: 354 KDWYRVELANGTKAWVYAELL-GVTP 378
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 15/141 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKSLLS 116
T+ A A R GPG+ Y + L+ G +EVV Y W + R D ++ WI L+
Sbjct: 154 ATVIADTAKVRNGPGLAYDDI-ARLSNGATIEVVGRYGEWLRFRTADDPSLRWIAAELVD 212
Query: 117 GKRSAI-------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ P T +NL P + + ++ G L + E
Sbjct: 213 LPEAVFYNLKPVAEAEIPPPPPPRVATVREDGLNLRDGPGTNYVSMKRLTAGQELNLVEQ 272
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W GW+ + +
Sbjct: 273 FNGWFLVETGGLFGWVTSEFL 293
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ +AP + P P V ++ + N R GPG Y + + G V+++
Sbjct: 292 FLTIAPGVVERVPVAASIPDPNPPLVGSVLENSVNLRKGPGSAYERIGA-VNAGTEVKLL 350
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+++W ++ +GT W+ LL A
Sbjct: 351 ARHKDWYRVELANGTKAWVYAELLGVTPMA 380
>gi|30250141|ref|NP_842211.1| hypothetical protein NE2209 [Nitrosomonas europaea ATCC 19718]
gi|30139248|emb|CAD86121.1| hypothetical protein NE2209 [Nitrosomonas europaea ATCC 19718]
Length = 162
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 15/174 (8%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+ P ++ L F L + +E + F++I S P +
Sbjct: 2 KFQPLRGESITTGLLFSLFVLLIFSCRAVAQESTRNE----FLSIAKSAVVLYDAPSLNA 57
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ LP+EVV + W ++RD+ G + W+ L KR IV
Sbjct: 58 GKLYV-AGVNLPLEVVVKVVGWVKVRDYHGYLAWVEDKNLGPKRFVIVKIPVGS------ 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKIWGI 187
+Y+ P+ S ++ + + V+L + +G W + G+I+ +IWG+
Sbjct: 111 --VYQSPNPTSSLIFQAQQDVILELLGVVAGGWVKVKHRDGQTGYIRTDQIWGV 162
>gi|217962719|ref|YP_002341295.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|229141968|ref|ZP_04270494.1| Enterotoxin [Bacillus cereus BDRD-ST26]
gi|217064361|gb|ACJ78611.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|228641583|gb|EEK97888.1| Enterotoxin [Bacillus cereus BDRD-ST26]
Length = 582
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NMNGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 241 QDWFKINYAGQTAYISKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|206976889|ref|ZP_03237791.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
gi|206744855|gb|EDZ56260.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
Length = 585
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NMNGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 241 QDWFKINYAGQTAYISKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|304317752|ref|YP_003852897.1| 5'-nucleotidase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779254|gb|ADL69813.1| 5'-Nucleotidase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 1208
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R+G GI Y V+ L G + +V E W QI D++G G++ ++
Sbjct: 1083 VTASALNVRLGAGINYKVIGV-LRAGQSINIVGENNGWYQI-DYNGKTGYVYGKYVASSP 1140
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + +N+ I ++ + V G L + W G
Sbjct: 1141 DLSNVAVLKSVRVTAKDGLNVRVNNSINALKIGAVPYGYELKVVGEYDGWYKVQYNGAYG 1200
Query: 178 WIKKQK 183
++ +
Sbjct: 1201 FVYAKH 1206
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 24/74 (32%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N +S + + ++ +N+ I ++ + G + I + W
Sbjct: 1063 NYWTISKTPVSEGNVGSKGIVTASALNVRLGAGINYKVIGVLRAGQSINIVGENNGWYQI 1122
Query: 171 YNLDTEGWIKKQKI 184
G++ + +
Sbjct: 1123 DYNGKTGYVYGKYV 1136
>gi|222098694|ref|YP_002532752.1| N-acetylmuramoyl-l-alanine amidase; enterotoxin [Bacillus cereus
Q1]
gi|221242753|gb|ACM15463.1| N-acetylmuramoyl-L-alanine amidase; possible enterotoxin [Bacillus
cereus Q1]
Length = 582
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NMNGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|294499793|ref|YP_003563493.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
gi|294349730|gb|ADE70059.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
Length = 583
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ A+ N R P +V +TKG V++V E + W +I + G WI+ ++
Sbjct: 33 AKVTATSLNVRATPSTSGAIVGK-ITKGNTVDIVDESKGWAKIT-YSGKEAWISSQYINK 90
Query: 118 KRSAIVSPWNRKTNNPIY----INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
++ S N + + + +N+ + IV + +T+ + SG W
Sbjct: 91 TQTNSTSTANSTSKSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQVKTA 150
Query: 173 LDTEGWIKKQKI 184
GW+ Q +
Sbjct: 151 SGQTGWVASQYL 162
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
+ AS N R ++V T L + V VVK +W Q++ G GW+ L
Sbjct: 106 AVVNASSLNVRSSASTSASIV-TNLPRNSKVTVVKVSGSWSQVKTASGQTGWVASQYLQA 164
Query: 116 -----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + + N +N+ + IV + +T+ + SG W
Sbjct: 165 GSASSAPAKDSGSTSSQSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQV 224
Query: 171 Y-NLDTEGWIKKQKI 184
GW+ Q +
Sbjct: 225 KTASGQTGWVASQYL 239
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 9/152 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S + + AS N R ++V T L + V VVK +W Q+
Sbjct: 166 SASSAPAKDSGSTSSQSAVVNASSLNVRSSASTSASIV-TNLPRNSKVTVVKVSGSWSQV 224
Query: 101 RDFDGTIGWINKSLL-------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ G GW+ L + + + + N +N+ + IV +
Sbjct: 225 KTASGQTGWVASQYLQAGSASSAPAKDSGSTSSQSAVVNASSLNVRSSASTGASIVTSLS 284
Query: 154 PGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+T+ + SG W GW+ Q +
Sbjct: 285 RNSKVTVVKVSGSWSQIKTASGQTGWVASQYL 316
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S + + AS N R ++V T L++ V VVK +W QI
Sbjct: 243 SASSAPAKDSGSTSSQSAVVNASSLNVRSSASTGASIV-TSLSRNSKVTVVKVSGSWSQI 301
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ G GW+ L P NL +P + + I+ + G
Sbjct: 302 KTASGQTGWVASQYLKADSGQSSQPAQSIQITKAS-NLRSQPSLSAGIIRVAKAGERFKK 360
Query: 161 RECSGEWCFG-YNLDTEGWIKKQK 183
+ +W Y+ W+ K
Sbjct: 361 VGETNDWVQIQYSASQTAWVSKGL 384
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV K+ G + I + S W E WI Q I
Sbjct: 29 AAESAKVTATSLNVRATPSTSGAIVGKITKGNTVDIVDESKGWAKITYSGKEAWISSQYI 88
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 59 TIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+I+ ++A N R P + ++ G + V E +W QI+ W++K L +
Sbjct: 329 SIQITKASNLRSQPSLSAGIIRV-AKAGERFKKVGETNDWVQIQYSASQTAWVSKGLTAA 387
>gi|260892381|ref|YP_003238478.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
gi|260864522|gb|ACX51628.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
Length = 377
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI----GWINKS 113
V + N R GPG Y VV +++G + VV E W + DG GW+ +
Sbjct: 33 VEVTGLVVNLRAGPGTDYPVVGQ-VSRGTRLVVVGEARGWYNVALPDGRRAFIAGWLARP 91
Query: 114 LLSGKRSAIVS------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
L S ++ P N +NL P +V +V G L +
Sbjct: 92 LEEAVPSRGITAREDKPVSSPAAPPNSVEVTGSVVNLRAGPGTDYPVVGQVSRGTRLVVV 151
Query: 162 ECSGEWCFGYNLDTE-----GWIKKQK 183
+ W D GW+ + +
Sbjct: 152 GEARGWYNVVLPDGRRAFIAGWLARPR 178
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ +K + P V + S N R GPG Y VV +++G + VV E W
Sbjct: 101 ITAREDKPVSSPAAPPNSVEVTGSVVNLRAGPGTDYPVVGQ-VSRGTRLVVVGEARGWYN 159
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ DG +I L + AI S + P +
Sbjct: 160 VVLPDGRRAFIAGWLARPREEAISSRGGEERLIPSAL 196
>gi|196041880|ref|ZP_03109168.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
gi|196027252|gb|EDX65871.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
Length = 564
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNVNVDQTNEQQKNVTVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 12/144 (8%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ R T+ A+ R P ++ Y K L +V+ E W +I+ +G +G
Sbjct: 112 TNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEAKAL--QVIGEENGWLKIK-HNGKVG 168
Query: 109 WINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+++ + S K + V + N + + P I+ V G ++ +
Sbjct: 169 YVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQV 228
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+W +I K I
Sbjct: 229 TGEVQDWVKINYSGQTAYISKDYI 252
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSESSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEAKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 48/136 (35%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A+ R GP ++V+ L G ++V W +I + +G G+++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 116 ----SGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
S ++ S + N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVDDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKNGYVSSKFL 414
>gi|47569729|ref|ZP_00240402.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47553580|gb|EAL11958.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 579
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A + R G + ++ G + V+ E W + + +G G+++ +S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKF-NINGKTGFVSGEFVSKNG 108
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ +
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFTKFVK 350
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 351 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 410
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 411 WSKINYNGQTGYIGTRYL 428
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 ANTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYVSKDYV 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 263
Query: 119 RS-----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S V N + + P ++ V G L +
Sbjct: 264 GSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVI 323
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G++ +
Sbjct: 324 GSEGSWFKVNYQGKTGYVSSE 344
>gi|156741201|ref|YP_001431330.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
gi|156232529|gb|ABU57312.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
Length = 532
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T++ S R GPG Y V T L + VE+ + Y++W I G GW+ L+
Sbjct: 231 ATVRESGLQLRDGPGTNY-VSMTTLQQHTQVELYEIYQDWFHIGAPGGLDGWVKAEFLNV 289
Query: 118 KRSAI-----------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
S + +P +NL K PD + + +++ GV + + +
Sbjct: 290 DPSVVKRLLVAETIPDPNPALVGVIAENSVNLRKGPDSRYDRIGRIDAGVQVDLIGKHKD 349
Query: 167 WCFGYN-LDTEGWIKKQKI 184
W T+ W+ + I
Sbjct: 350 WLRVRLPDGTKAWVFRDLI 368
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
L+L E +P T+ RA R GPG Y V + PV+V+ Y +W Q
Sbjct: 131 LSLISRSEALAPIVVP--ATVAVERAFLRNGPGTEYDAVGRISGE-TPVQVIGRYGDWFQ 187
Query: 100 IRDF-DGTIGWINKSLLS-----------GKRSAIVSPWNRKTNNPIY--INLYKKPDIQ 145
+R+ DG I WI+ +L+ + SAI P K + L P
Sbjct: 188 VRERVDGPIYWISGEVLAISEAASYTLFEVQESAIPPPPPPKIATVRESGLQLRDGPGTN 247
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + ++ + + E +W +GW+K + +
Sbjct: 248 YVSMTTLQQHTQVELYEIYQDWFHIGAPGGLDGWVKAEFL 287
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I + N R GP Y + + G+ V+++ ++++W ++R DGT W+ + L+S
Sbjct: 314 IAENSVNLRKGPDSRYDRIGR-IDAGVQVDLIGKHKDWLRVRLPDGTKAWVFRDLISTTA 372
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + ++ +P + + G +
Sbjct: 373 HVLRRVPVSRDFPALPVSG-GRPGASAGLANIPASGDIA 410
>gi|148658216|ref|YP_001278421.1| NLP/P60 protein [Roseiflexus sp. RS-1]
gi|148570326|gb|ABQ92471.1| NLP/P60 protein [Roseiflexus sp. RS-1]
Length = 532
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 14/167 (8%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
LAI + L E P P+ T++ R GPG Y V T L + +E
Sbjct: 204 LAISEAASFTLFEVQE-SAIPPPPPPKIATVREDGLQLRDGPGTHY-VPITSLKQNTQIE 261
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-----------VSPWNRKTNNPIYINL 138
+ + Y++W + G GW+ L+ + S + +P +NL
Sbjct: 262 LYEIYQDWFHVGAPGGLDGWVKAEFLNVEPSVVKRLLVAETIPDPNPALVGVIAENSVNL 321
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
K PD + V +++ GV + + +W T+ W+ + I
Sbjct: 322 RKGPDSRYDRVGRIDAGVQVDLIGKYKDWLRVRLPDGTKAWVFRDLI 368
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 18/160 (11%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
L+L E +P TI RA R GPG Y V PV+V+ Y +W Q
Sbjct: 131 LSLISRSEALAPIVVP--ATIAVERAFLRNGPGTNYDAVGRISGA-TPVQVIGRYGDWFQ 187
Query: 100 IRDF-DGTIGWINKSLLSGKRSAIVS-------------PWNRKTNNPIYINLYKKPDIQ 145
+R+ DG I WI+ +L+ +A + P T + L P
Sbjct: 188 VRERVDGPIYWISGEVLAISEAASFTLFEVQESAIPPPPPPKIATVREDGLQLRDGPGTH 247
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + ++ + + E +W +GW+K + +
Sbjct: 248 YVPITSLKQNTQIELYEIYQDWFHVGAPGGLDGWVKAEFL 287
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I + N R GP Y V + G+ V+++ +Y++W ++R DGT W+ + L++
Sbjct: 314 IAENSVNLRKGPDSRYDRVGR-IDAGVQVDLIGKYKDWLRVRLPDGTKAWVFRDLITTTA 372
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + ++ +P + G +
Sbjct: 373 HVLRRVPVSRDFPALPVSG-GRPGASPGLANIAASGDVA 410
>gi|326790641|ref|YP_004308462.1| hypothetical protein Clole_1538 [Clostridium lentocellum DSM 5427]
gi|326541405|gb|ADZ83264.1| protein of unknown function DUF187 [Clostridium lentocellum DSM
5427]
Length = 566
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A+ N R G VV ++ G V ++ +W +++ +GT+GW + + +
Sbjct: 427 VSATTLNIRSGARTDRPVV-AKVSSGTKVTILSILGDWYKVKLSNGTVGWASAAYIKVDA 485
Query: 116 ----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+G + S + T N +N+ IVAK+ G +TI G
Sbjct: 486 SQSTTNNGNTAGSTTNTSSFPKQGTVNATSLNIRAGARTDRAIVAKLAKGTKVTILSILG 545
Query: 166 EWCFGY-NLDTEGWIKKQKI 184
+W T GW K I
Sbjct: 546 DWYKVKLADGTIGWCVKTYI 565
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P+ T+ A+ N R G +V L KG V ++ +W +++ DGTIGW K+
Sbjct: 506 PKQGTVNATSLNIRAGARTDRAIV-AKLAKGTKVTILSILGDWYKVKLADGTIGWCVKTY 564
Query: 115 LS 116
+S
Sbjct: 565 IS 566
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ + +N+ +VAKV G +TI G+W + T GW
Sbjct: 420 AVGKTGVVSATTLNIRSGARTDRPVVAKVSSGTKVTILSILGDWYKVKLSNGTVGWASAA 479
Query: 183 KI 184
I
Sbjct: 480 YI 481
>gi|229090917|ref|ZP_04222142.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228692423|gb|EEL46157.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
Length = 564
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAENTVIQKEAKHEKPTDVVKYKNQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P T++ + +G ++V+ E +W +I + G G+++ +S + VS
Sbjct: 61 PNTSSTIMGR-VYEGEVLQVIGEENSWLKI-NHKGKTGYVSSEFVSENSVSAKTNVSMSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V L + W + G++ Q +
Sbjct: 119 SKTVIANVLRVRTQPNTSSAIMGRVYEEKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + + KG V+V E ++W +I ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-VHKGQIVQVTGEVQDWVKI-NYSGQTAYISKDYISKND 256
Query: 118 -----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+++ V + + + P ++ V G +L +
Sbjct: 257 FNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGRILQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHNGRTGYVSSEYV 334
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVV 91
Y++ + + R T+ A+ R P ++ Y K L +V+
Sbjct: 95 TGYVSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEEKAL--QVI 152
Query: 92 KEYENWRQIRDFDGTIGWINKSLL-------SGKRSAIVSPWNRK-TNNPIYINLYKKPD 143
E W +I+ +G +G+++ + S K + V + N + + P
Sbjct: 153 GEENGWLKIK-HNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPS 211
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G ++ + +W +I K I
Sbjct: 212 TSHTILGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLS 116
+ A+ R GP ++V+ L G ++V W +I + +G G++ +
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GRILQVTGVENGWLKI-NHNGRTGYVSSEYVKFVK 338
Query: 117 GKRSAIVSPWNRKTN--------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G + N T N +N+ ++ + G+ + + W
Sbjct: 339 GNTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYNGKNGYVSSEFL 414
>gi|154499829|ref|ZP_02037867.1| hypothetical protein BACCAP_03486 [Bacteroides capillosus ATCC
29799]
gi|150271427|gb|EDM98684.1| hypothetical protein BACCAP_03486 [Bacteroides capillosus ATCC
29799]
Length = 304
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 13/170 (7%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+P + A + + A + + T+ A R T
Sbjct: 1 MIPAGKFLRVAVLGAALSAITVVGASAASVGVG---------TVTADALRLRESASTDST 51
Query: 77 VVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSA-IVSPWNRKTNNPI 134
++ T G V V+++ N W ++ D+ G+++ L +++A + + +
Sbjct: 52 ILAT-APSGDTVVVLEDAGNGWYKV-DYKSIEGYMSGEYLDVQKTADVKIGYGKVNAGGS 109
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P VA + G ++ I W G++ +
Sbjct: 110 TLNMRSGPGTSYDRVATLSDGTVVDIVGIDNGWYKVTYNGATGYVSSDYM 159
>gi|229076447|ref|ZP_04209409.1| Enterotoxin [Bacillus cereus Rock4-18]
gi|228706633|gb|EEL58844.1| Enterotoxin [Bacillus cereus Rock4-18]
Length = 581
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G ++ G + V+ E W +I + +G G+++ +S K
Sbjct: 51 TVNADVLHVRAGSSTSQDIISRVYN-GQSLNVIGEENGWFKI-NHNGKTGFVSGEFVSKK 108
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + + + P+ S + +V G L + W +
Sbjct: 109 GATNPNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQ 168
Query: 176 EGWIKKQKIWGIYPG 190
G++ Q + G+
Sbjct: 169 TGYVSGQFVSGVSAN 183
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQTGYVSGQFVSGVS 181
Query: 118 KRSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N++T P + + P V V+ G ++ + +W
Sbjct: 182 ANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKKGQVVQVTGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
++ K +
Sbjct: 242 KINYAGQTAYLSKDYV 257
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 21/140 (15%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP + V + + KG V+V E ++W +I ++ G +++K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHPTVGS-VKKGQVVQVTGEVQDWFKI-NYAGQTAYLSKDYVTKG 260
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V N + + P ++ V G L
Sbjct: 261 GSNENVVQGNKEDNKQEQNNNVTVQTGGTYVVNTTSLRVRTGPAAYHSVIGGVLNGTTLN 320
Query: 160 IRECSGEWCFGYNLDTEGWI 179
+ W G++
Sbjct: 321 VVGSENGWFKVNYQGKTGFV 340
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 292 VNTTSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSGEFVKFVK 349
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 350 GGTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSG 409
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 410 WSKINYSGKTGYI 422
>gi|332974779|gb|EGK11695.1| ErfK/YbiS/YcfS/YnhG family protein [Desmospora sp. 8437]
Length = 317
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI A+RAN R P + TVV KG + + W +++ G ++++S+
Sbjct: 190 VTITATRANLRSQPSLTATVV-EQSGKGNRLTLTGTVGEWYRVKRTHGKTAYVHQSVSRK 248
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
S++ P + T N+ K P + ++ +V G L G W +
Sbjct: 249 GGSSLHPPKGKVTVTARLANIRKAPSMSGKVLQRVVRGKQLKATGKKGNWIQIRLSSGQT 308
Query: 177 GWIKKQKI 184
+I + +
Sbjct: 309 AFIHQNIL 316
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
R +GT+ I+ + A+ + + T NL +P + + +V + G LT+
Sbjct: 165 RVPEGTLVKIHD---GRQNPAVKTASGQVTITATRANLRSQPSLTATVVEQSGKGNRLTL 221
Query: 161 RECSGEWCFGYN-LDTEGWIKKQ 182
GEW ++ +
Sbjct: 222 TGTVGEWYRVKRTHGKTAYVHQS 244
>gi|254478470|ref|ZP_05091846.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum DSM
12653]
gi|214035559|gb|EEB76257.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum DSM
12653]
Length = 1212
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 5/144 (3%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S E++ +P + + AS N R G G+ Y V+ L G V +++E W +I
Sbjct: 1069 SQSTEQQTPS-QPAYNYGIVTASALNVREGAGLRYKVIGV-LPAGKVVTLLEEVNGWYKI 1126
Query: 101 RDFDGTIGWINKSLLSGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+++G G+I ++ S +V K +N+ + + + V G L
Sbjct: 1127 -NYNGKTGYIYSKYVAATPNPSNVVVLKAVKVTAKSGLNVRVNNSLNARKIGAVPYGTEL 1185
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQ 182
+ W G++ +
Sbjct: 1186 KVVGEYNGWYQVLYNGGFGYVYAK 1209
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 40/117 (34%), Gaps = 20/117 (17%)
Query: 84 KGLPVEVVKEYE--------NWR--------QIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ L + ++E+ NW ++ G S + +++ +N
Sbjct: 1028 RNLMIRYIQEHGTISPVVESNWYISTTPVQEEVEVSQGQQ----PSQSTEQQTPSQPAYN 1083
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ ++ + G ++T+ E W G+I + +
Sbjct: 1084 YGIVTASALNVREGAGLRYKVIGVLPAGKVVTLLEEVNGWYKINYNGKTGYIYSKYV 1140
>gi|30261984|ref|NP_844361.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47777984|ref|YP_018596.2| NLP/P60 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184824|ref|YP_028076.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|165870129|ref|ZP_02214785.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170706012|ref|ZP_02896474.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|177650724|ref|ZP_02933621.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190566425|ref|ZP_03019343.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227815228|ref|YP_002815237.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229600369|ref|YP_002866355.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
gi|254734851|ref|ZP_05192563.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254755506|ref|ZP_05207540.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Vollum]
gi|254760042|ref|ZP_05212066.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Australia 94]
gi|30256610|gb|AAP25847.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47551689|gb|AAT31071.2| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. 'Ames Ancestor']
gi|49178751|gb|AAT54127.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|164714017|gb|EDR19538.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170129014|gb|EDS97879.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|172083185|gb|EDT68246.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190562560|gb|EDV16527.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227007237|gb|ACP16980.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229264777|gb|ACQ46414.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
Length = 420
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|65319267|ref|ZP_00392226.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 420
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|167638368|ref|ZP_02396645.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
gi|167513669|gb|EDR89038.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
Length = 420
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ + +G ++V+ + W ++ +G G+++ ++
Sbjct: 61 TVTADVLNVRSGAGTGHSVISK-VKQGQVLQVIGQENGWFKVT-VNGQTGYVSGDFVTTG 118
Query: 119 RSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T N +N+ P ++ V G + + +W
Sbjct: 119 GKTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGG 178
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 179 TGYVSKDFV 187
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 59 KYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|159900165|ref|YP_001546412.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893204|gb|ABX06284.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 391
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP + Y + L P+ VV +E W Q+ +GW++ S ++
Sbjct: 112 VASEELNLRDGPSVDY-LPMAILLNTTPLTVVGRFEGWLQVVTPQRALGWVDDSYVALAS 170
Query: 120 SAIVSPWNRKTNNPIYI----------NLYKKPDIQSIIVAKV--EPGVLLTIRECSGEW 167
SA P +P + N+ KP ++ I+ + E G + +++ G +
Sbjct: 171 SAQTLPQVNLHADPNPVLVAGLTVERANVRSKPQTEAEIITTLSAEHGQVNLLQQREGWF 230
Query: 168 CFGYNLDTEGWIKKQKI 184
N TEGW+ + +
Sbjct: 231 NVRTNDGTEGWVSAELL 247
>gi|229072695|ref|ZP_04205897.1| Enterotoxin [Bacillus cereus F65185]
gi|229082445|ref|ZP_04214908.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|228700877|gb|EEL53400.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|228710671|gb|EEL62644.1| Enterotoxin [Bacillus cereus F65185]
Length = 578
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 GYVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQTGYIGTRYL 425
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 240 DWFKINYAGQTAYVSKDYV 258
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|326390248|ref|ZP_08211808.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325993693|gb|EGD52125.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 1254
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V +++E W +I D++G G+I ++
Sbjct: 1129 VTASALNVRAGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-DYNGKTGYIYGKYVAATP 1186
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 1187 NPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNGGFG 1246
Query: 178 WIKKQ 182
++ +
Sbjct: 1247 YVYAK 1251
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1125 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1182
>gi|167038327|ref|YP_001665905.1| 5'-nucleotidase., 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166857161|gb|ABY95569.1| 5'-nucleotidase., 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 1226
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V +++E W +I D++G G+I ++
Sbjct: 1101 VTASALNVRAGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-DYNGKTGYIYGKYVAATP 1158
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 1159 NPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNGGFG 1218
Query: 178 WIKKQ 182
++ +
Sbjct: 1219 YVYAK 1223
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1097 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1154
>gi|320116728|ref|YP_004186887.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|319929819|gb|ADV80504.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 1226
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V +++E W +I D++G G+I ++
Sbjct: 1101 VTASALNVRAGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-DYNGKTGYIYGKYVAATP 1158
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 1159 NPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNGGFG 1218
Query: 178 WIKKQ 182
++ +
Sbjct: 1219 YVYAK 1223
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1097 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1154
>gi|228942372|ref|ZP_04104911.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228975303|ref|ZP_04135860.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981939|ref|ZP_04142234.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228778051|gb|EEM26323.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228784436|gb|EEM32458.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228817416|gb|EEM63502.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326943022|gb|AEA18918.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 579
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 GYVSGEFVSGV 178
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQNGYIGTRYL 425
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|150391394|ref|YP_001321443.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
gi|149951256|gb|ABR49784.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
Length = 372
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI A+ N R P ++V T L+ G V ++ + W QI+ +GT G+++ ++
Sbjct: 105 TITANILNVRSIPSTDGSIV-TKLSNGSDVTILDTKDQWYQIQLANGTKGFVHSDFVTSI 163
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EG 177
S + + Y +L +KP+ S +V + ++ I+ W D EG
Sbjct: 164 PS-----YPKAKVLKDYSSLREKPNSNSPLVMGLNTADVIYIKGYDNGWYHVVTKDFIEG 218
Query: 178 WIKKQKI 184
+IK + +
Sbjct: 219 FIKSEVV 225
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 16/168 (9%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ +I +A + + A + I + + R V+
Sbjct: 7 KSMALTLIIPIIATGLSTSFVFAEEKDATIISNQGI------------LRNLANFQGEVI 54
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V V + ++W Q++ G T GWI K +L + + + T +N
Sbjct: 55 -ETLPIGTQVMVKETTQDWYQVQLQGGNTSGWIYKDILIKNEE-TTNTFKKGTITANILN 112
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ P IV K+ G +TI + +W T+G++ +
Sbjct: 113 VRSIPSTDGSIVTKLSNGSDVTILDTKDQWYQIQLANGTKGFVHSDFV 160
>gi|229164175|ref|ZP_04292110.1| Enterotoxin [Bacillus cereus R309803]
gi|228619292|gb|EEK76183.1| Enterotoxin [Bacillus cereus R309803]
Length = 582
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 52 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NHNGQTGFVSGEFVSKNG 109
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + P+ S + +V G L + W +
Sbjct: 110 ASSSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 169
Query: 177 GWIKKQKIWGI 187
G++ + G+
Sbjct: 170 GYVSGAFVSGV 180
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 296 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 353
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 354 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 413
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 414 WSKINYNGQTGYI 426
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ + +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGAFVSGVS 181
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 182 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 241
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 QDWFKINYAGQTAYVSKDYV 261
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I AS N R G G Y ++ L +G V+V+ E W +I +++G G+I LS
Sbjct: 378 INASALNVRSGEGTNYRIIGA-LPQGQKVQVISENSGWSKI-NYNGQTGYIGTRFLSKTP 435
Query: 120 SAIVS 124
V+
Sbjct: 436 VGGVT 440
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 21/143 (14%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 207 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 264
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V N + + P ++ V G L
Sbjct: 265 GSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTTLN 324
Query: 160 IRECSGEWCFGYNLDTEGWIKKQ 182
+ G W G++ +
Sbjct: 325 VIGSEGSWFKVNYQGKTGYVSSE 347
>gi|218233523|ref|YP_002370011.1| putative cell wall hydrolase [Bacillus cereus B4264]
gi|218161480|gb|ACK61472.1| putative cell wall hydrolase [Bacillus cereus B4264]
Length = 577
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 GYVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|219848908|ref|YP_002463341.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
gi|219543167|gb|ACL24905.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
Length = 536
Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 20/171 (11%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI++ L P+ + K + ++ N R GPG Y V LT G + +
Sbjct: 216 AIFYNLKPVDESTIPPPPPPKVAI-----VREDGLNLRDGPGTNY-VSMKRLTAGEELNL 269
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAI-----------VSPWNRKTNNPIYINLY 139
V++Y W I G GW+ L+ I +P + +NL
Sbjct: 270 VEQYNGWFLIE-TGGIYGWVTSEFLNIAPGVIERVPVASSIPDPNPPLVGSVLENSVNLR 328
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP 189
K P + + G + + +W + T WI + + G+ P
Sbjct: 329 KGPGSAYERIGSINAGADVKLLARHKDWYRVELSNGTRAWIYSELL-GVTP 378
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 15/148 (10%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGW 109
PL T+ A A R GPG+ Y + L G +EVV + W Q R D T+ W
Sbjct: 147 NAPLIVPATVTADVAKVRNGPGLAYDDI-ARLNGGTTIEVVGRHNEWLQFRTTDDPTLRW 205
Query: 110 INKSLLSGKRSAIVSPWNRKTNN-------------PIYINLYKKPDIQSIIVAKVEPGV 156
I L+ + + + +NL P + + ++ G
Sbjct: 206 IAAELVDLPEAIFYNLKPVDESTIPPPPPPKVAIVREDGLNLRDGPGTNYVSMKRLTAGE 265
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + E W GW+ + +
Sbjct: 266 ELNLVEQYNGWFLIETGGIYGWVTSEFL 293
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ +AP + P P V ++ + N R GPG Y + + + G V+++
Sbjct: 292 FLNIAPGVIERVPVASSIPDPNPPLVGSVLENSVNLRKGPGSAYERIGS-INAGADVKLL 350
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+++W ++ +GT WI LL A P+
Sbjct: 351 ARHKDWYRVELSNGTRAWIYSELLGVTPMAARRVPYTNDIPPLPNRAR 398
>gi|229175904|ref|ZP_04303402.1| Enterotoxin [Bacillus cereus MM3]
gi|228607637|gb|EEK64961.1| Enterotoxin [Bacillus cereus MM3]
Length = 586
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNTSVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKN 108
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + P+ S + +V G L + W +
Sbjct: 109 GASNSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVVGQENGWVKINHNGQ 168
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 VGYVSGEFVSGV 180
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 296 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 353
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 354 GGTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 413
Query: 164 SGEWCFGYNLDTEGWI 179
+ W G+I
Sbjct: 414 NSGWSKINYNGQNGYI 429
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + G + VV + W +I + +G +G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVVGQENGWVKI-NHNGQVGYVSGEFVSGVS 181
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P VA V G ++ +
Sbjct: 182 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVASVTKGQVVQVVGEV 241
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 QDWFKINYAGQTAYVSKDYV 261
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 21/145 (14%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 207 TVNVSSLRVRTGPSTSHTTV-ASVTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 264
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V N + + P ++ V G L
Sbjct: 265 GSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLN 324
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 325 VVGSENGWFKVNYQGKTGFVSSEFV 349
>gi|307267136|ref|ZP_07548646.1| 5'-Nucleotidase domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917856|gb|EFN48120.1| 5'-Nucleotidase domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 728
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V +++E W +I D++G G+I ++
Sbjct: 603 VTASALNVRAGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-DYNGKTGYIYGKYVAATP 660
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 661 NPSNVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNGGFG 720
Query: 178 WIKKQ 182
++ +
Sbjct: 721 YVYAK 725
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 599 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 656
>gi|229020450|ref|ZP_04177204.1| Enterotoxin [Bacillus cereus AH1273]
gi|229026680|ref|ZP_04183021.1| Enterotoxin [Bacillus cereus AH1272]
gi|228734632|gb|EEL85285.1| Enterotoxin [Bacillus cereus AH1272]
gi|228740867|gb|EEL91111.1| Enterotoxin [Bacillus cereus AH1273]
Length = 567
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 52 VTADVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NLNGKTGYVSGEFVSKNG 109
Query: 120 SAI---VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ VS + + P+ S + +V G L + W +
Sbjct: 110 ATTNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 169
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 170 GYVSGEFVSGV 180
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ ++ G G+++ + +
Sbjct: 288 VNATSLRVRTGPATYHSVIGGVLN-GTKLNVVGSEGSWFKV-NYQGKTGYVSSEFVKFVK 345
Query: 120 SAIVSPWNRKTNN----------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+P + N +N+ I+ + G + + + W
Sbjct: 346 GGTTTPEQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSK 405
Query: 170 GYNLDTEGWI 179
G+I
Sbjct: 406 INYNGQTGYI 415
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I AS N R G G Y ++ L +G V+V+ E W +I +++G G+I LS
Sbjct: 367 INASALNVRSGEGTNYRIIGA-LPQGQKVQVISENSGWSKI-NYNGQTGYIGTRFLSKTP 424
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 124 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 181
Query: 118 ---------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + T N + + P + V+ G ++ + +W
Sbjct: 182 SNAGSSNNNTNNTVKPASGNYTVNVSSLRVRTGPSTSHTTIGSVKKGQVVQVVGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
++ K +
Sbjct: 242 KINYAGQTAYLSKDYV 257
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T + + + V+VV E ++W +I ++ G +++K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHTTIGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 260
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 261 GSNENATQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTKLNVVGS 320
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W G++ + +
Sbjct: 321 EGSWFKVNYQGKTGYVSSEFV 341
>gi|229193480|ref|ZP_04320427.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228590012|gb|EEK47884.1| Enterotoxin [Bacillus cereus ATCC 10876]
Length = 578
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGQTGFVSGEFVSKSG 108
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+A VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQTGYIGTRYL 425
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 240 DWFKINYAGQTAYVSKDYV 258
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|206970249|ref|ZP_03231202.1| putative cell wall hydrolase [Bacillus cereus AH1134]
gi|206734826|gb|EDZ51995.1| putative cell wall hydrolase [Bacillus cereus AH1134]
Length = 578
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGQTGFVSGEFVSKSG 108
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+A VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQTGYIGTRYL 425
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 240 DWFKINYAGQTAYVSKDYV 258
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|229181492|ref|ZP_04308820.1| Enterotoxin [Bacillus cereus 172560W]
gi|228602067|gb|EEK59560.1| Enterotoxin [Bacillus cereus 172560W]
Length = 578
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGQTGFVSGEFVSKSG 108
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+A VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQTGYIGTRYL 425
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 240 DWFKINYAGQTAYVSKDYV 258
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|228923965|ref|ZP_04087242.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228835764|gb|EEM81128.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 577
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGQTGFVSGEFVSKSG 108
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+A VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 240 DWFKINYAGQTAYVSKDYV 258
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +++K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYVSKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|289577558|ref|YP_003476185.1| 5'-nucleotidase domain protein [Thermoanaerobacter italicus Ab9]
gi|289527271|gb|ADD01623.1| 5'-Nucleotidase domain protein [Thermoanaerobacter italicus Ab9]
Length = 1222
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V +++E +W +I D++G G+I ++
Sbjct: 1097 VTASALNVRAGASTSSKIIGV-LPAGKVVTLLEEVNSWYKI-DYNGKTGYIYGKYVAATP 1154
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 1155 NPSNVTVLKAVKVTAKSGLNVRVGNSINAKNIGAVPYGTELKVVGEYNGWYQIQYNGGFG 1214
Query: 178 WIKKQ 182
++ +
Sbjct: 1215 YVYSK 1219
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1093 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNSWYKIDYNGKTGYIYGKYV 1150
>gi|332980970|ref|YP_004462411.1| SpoIID/LytB domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698648|gb|AEE95589.1| SpoIID/LytB domain protein [Mahella australiensis 50-1 BON]
Length = 742
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGKR 119
S N R G G Y VV + L G VEV+ E +W +I+ + G+++ L SG
Sbjct: 611 GSTLNVRSGAGTQYKVVGS-LKNGTKVEVLGESGSWYKIK-YGSITGYVSGQYLVVSGTN 668
Query: 120 SAIVSP-------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
A +N+ Q +V ++ G + + SG W
Sbjct: 669 PAPTPTPPSTPSSQTGTVKVGSMLNVRSGAGTQYKVVGSLKNGTKVEVLGESGSWYKIKY 728
Query: 173 LDTEGWIKKQKI 184
G++ Q +
Sbjct: 729 GSITGYVSGQYL 740
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ Q +V ++ G + + SG W G++ Q +
Sbjct: 608 VKVGSTLNVRSGAGTQYKVVGSLKNGTKVEVLGESGSWYKIKYGSITGYVSGQYL 662
>gi|228911069|ref|ZP_04074876.1| Enterotoxin [Bacillus thuringiensis IBL 200]
gi|228848573|gb|EEM93420.1| Enterotoxin [Bacillus thuringiensis IBL 200]
Length = 578
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S G
Sbjct: 51 VNASVLHVRTGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 348
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 349 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 408
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 409 WSKINYNGQTGYIGTRYL 426
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGE 239
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 VQDWFKINYAGQTAYISKDYV 260
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 264 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 323
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 ENGWFKVNYQGKTGFVSSEFV 344
>gi|229014402|ref|ZP_04171521.1| Enterotoxin [Bacillus mycoides DSM 2048]
gi|228747002|gb|EEL96886.1| Enterotoxin [Bacillus mycoides DSM 2048]
Length = 566
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NHNGKTGYVSGEFVSKN 108
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + VS T + + P+ S + +V G L + W
Sbjct: 109 GEKTNNNVSTGGNNTVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINYNGK 168
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 VGYVSGEFVSGV 180
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 288 VNATSLRVRTGPATYHSVIGGVLN-GTKLNVIGSEGSWFKV-NYQGKTGYVSSEFVKFVK 345
Query: 120 SAIVSPWNRKTNN----------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+P + N +N+ I+ + G + + + W
Sbjct: 346 GGTTTPEQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSK 405
Query: 170 GYNLDTEGWI 179
G+I
Sbjct: 406 INYNGQTGYI 415
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 13/137 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ A R P +V + +G + V+ + W +I +++G +G+++ +SG
Sbjct: 123 TVTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NYNGKVGYVSGEFVSGV 180
Query: 118 ----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + T N + + P + V+ G ++ + +W
Sbjct: 181 SSNAGSSNNNTNNTVKPASGNYTVNVSSLRVRTGPSTSHTTIGSVKKGQVVQVVGEVQDW 240
Query: 168 CFGYNLDTEGWIKKQKI 184
++ K +
Sbjct: 241 FKINYAGQTAYLSKDYV 257
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T + + + V+VV E ++W +I ++ G +++K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHTTIGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 260
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 261 GSNENTTQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGTKLNVIGS 320
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W G++ + +
Sbjct: 321 EGSWFKVNYQGKTGYVSSEFV 341
>gi|229172607|ref|ZP_04300166.1| Peptidase, M23/M37 [Bacillus cereus MM3]
gi|228611078|gb|EEK68341.1| Peptidase, M23/M37 [Bacillus cereus MM3]
Length = 569
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 68/177 (38%), Gaps = 12/177 (6%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-------RFVTIKASRANSRIG 70
M +IL + + ++ ++ A + +K P VT+ + R
Sbjct: 1 MKRILASVAVVSVTGSTFIGTAQAQTSIVPKDKKNEQPTDTVIYENPVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI---VSPWN 127
P ++ + +G ++V+ E W +I + +G IG+++ +S + VS
Sbjct: 61 PNTSSAIMGR-VYEGKVLQVIGEDNGWLKI-NHNGKIGYVSGEFVSKNGISAKTNVSTSR 118
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + + +P+ S I+ +V G + + W + G++ Q +
Sbjct: 119 SKIVTANALRVRTQPNTSSAIMGRVYEGKAIQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S R GP +T++ + + KG V V E +NW + ++ G +I+K +S
Sbjct: 199 VNVSSLRVRTGPSTSHTILGS-MYKGQVVPVTGEVQNWFKF-NYKGQDAYISKDYISKSG 256
Query: 120 S-------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
S V + + + P ++ V G L +
Sbjct: 257 SNANVDQTNEQQNNVTVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGQTLQVTGVENG 316
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 317 WLKINHHGRTGYVSSEYV 334
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 13/136 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--- 116
+ A+ R GP ++V+ L G ++V W +I + G G+++ ++
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVLN-GQTLQVTGVENGWLKI-NHHGRTGYVSSEYVNFVK 338
Query: 117 -GKRS-------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G S + + N +N+ ++ + G+ + + W
Sbjct: 339 GGTPSKPETSNPSTGAAIGDYYVNVSALNVRSGAGTNYGVMGALSKGIKVQVLAEQNGWG 398
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 399 KINYSGKNGYVSSKFL 414
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 12/134 (8%)
Query: 60 IKASRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
+ A+ R P ++ Y K ++V+ E W +I + +G +G+++ +
Sbjct: 122 VTANALRVRTQPNTSSAIMGRVYEGKA--IQVIGEDNGWLKI-NHNGKVGYVSSQFVIDG 178
Query: 116 -----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + P I+ + G ++ + W
Sbjct: 179 SSNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVPVTGEVQNWFKF 238
Query: 171 YNLDTEGWIKKQKI 184
+ +I K I
Sbjct: 239 NYKGQDAYISKDYI 252
>gi|225027153|ref|ZP_03716345.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
gi|224955617|gb|EEG36826.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
Length = 323
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
N R P V+ T ++ G V NW +R +G G+I KS LSG +
Sbjct: 45 YTTDGVNVRAKPNSSSKVL-TSVSAGTSVTKTGRSGNWIAVR-VNGIKGYIYKSYLSGSK 102
Query: 120 -----SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ S R +NL KP S + + G +T+ +G W +
Sbjct: 103 NTSTATVSKSTSYRAVITASSVNLRAKPSFSSRVKGSLSAGQAVTVCSTNGSWKKVQTSK 162
Query: 174 DTEGWIKKQKIWGIY 188
+G++ +GIY
Sbjct: 163 GKKGYV-----YGIY 172
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
I AS N R P V + L+ G V V +W++++ G G++
Sbjct: 117 AVITASSVNLRAKPSFSSRVKGS-LSAGQAVTVCSTNGSWKKVQTSKGKKGYVYG 170
>gi|34496583|ref|NP_900798.1| hypothetical protein CV_1128 [Chromobacterium violaceum ATCC 12472]
gi|34102437|gb|AAQ58803.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 147
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F ++K + P + + +++ PVEV++ + W ++RD G I WI + L
Sbjct: 23 EFRSVKETGVALYEAPSLSAKKLFA-VSRYYPVEVLQSQKEWARVRDATGGIAWIPAAAL 81
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLD 174
S +R +V + + ++ V +L ++E W + D
Sbjct: 82 SKQRWLLVVSAQAG--------VRDRGAEDGKLLFTVPKDGVLELQEPPQNGWAKVRHRD 133
Query: 175 TE-GWIKKQKIWGI 187
G+ + +WG+
Sbjct: 134 GSVGYARITDLWGL 147
>gi|44004541|ref|NP_982210.1| enterotoxin, putative [Bacillus cereus ATCC 10987]
gi|190015044|ref|YP_001966758.1| putative enterotoxin [Bacillus cereus]
gi|190015310|ref|YP_001967082.1| putative enterotoxin [Bacillus cereus]
gi|218848358|ref|YP_002455145.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|229164682|ref|ZP_04292546.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|296506616|ref|YP_003667850.1| enterotoxin [Bacillus thuringiensis BMB171]
gi|42741607|gb|AAS45052.1| enterotoxin, putative [Bacillus cereus ATCC 10987]
gi|116584720|gb|ABK00835.1| putative enterotoxin [Bacillus cereus]
gi|116584991|gb|ABK01100.1| putative enterotoxin [Bacillus cereus]
gi|218540409|gb|ACK92805.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228618762|gb|EEK75724.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|296327203|gb|ADH10130.1| enterotoxin, putative [Bacillus thuringiensis BMB171]
Length = 603
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 18/174 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALS-------HEKEIFEKKPLPRFVTIKASRANSRIG 70
M KIL + + ++A + A + K+ + VT+ R G
Sbjct: 1 MKKILASMAVASVAGGTVIGTAQAQTSIAPEDTQSKQASDVVTHENRVTVNVDALRVRTG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P T++ ++K V VV E E+W +I+ ++ T ++NK + N
Sbjct: 61 PSTSNTILGL-VSKEQSVPVVDETEDWYKIK-YNNTEAYVNKEY---------ATPNHIK 109
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + P + I+ V G +L + + W + + ++ K +
Sbjct: 110 VSTTTLRVRTGPSTSNSILGLVGEGEILQVTGEADGWYKIKYNNRDAYVSKDYV 163
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E + ++ P + + + R GP +++ + +G ++V E + W +I+
Sbjct: 93 NTEAYVNKEYATPNHIKVSTTTLRVRTGPSTSNSILGL-VGEGEILQVTGEADGWYKIK- 150
Query: 103 FDGTIGWINKSLLSGKRSAI------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++ +++K +S +S + V T N + + P + +V+ + G
Sbjct: 151 YNNRDAYVSKDYVSINKSLVKSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKGQ 210
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +W + +I K +
Sbjct: 211 VVQVVGEVQDWYRVKLNEGFAYINKDYV 238
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP + + VV + KG V+VV E ++W +++ +G +INK +S
Sbjct: 184 TVNVSSLRVRTGPSMSHPVVSV-MNKGQVVQVVGEVQDWYRVKLNEG-FAYINKDYVSRG 241
Query: 119 -----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ V + + + P ++ V G L + + W
Sbjct: 242 TNNTANLPQSIQTESVQQNGTYIVDAAVLRVRTGPANYHPVIGGVLKGQSLQVVDIENGW 301
Query: 168 CFGYNLDTEGWI 179
+ G++
Sbjct: 302 YKIKYNNRTGYV 313
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+E +++P + +K+S N R G G+ Y V+ + ++VV + W +I
Sbjct: 379 QQPTREQEKQEPAQNYY-VKSSSLNVRSGAGMNYEVIGV-VEPNQKIQVVGQQAGWYKI- 435
Query: 102 DFDGTIGWINKSLLSGKRSAIV---SPWNRKTNNPIYINLYKKPDIQS 146
+++G G++ + LS + A V P T N + + KP S
Sbjct: 436 NYNGKTGFVGMNYLSKTKVATVEEQPPSEVGTTNENTASGFIKPAAGS 483
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 17/60 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +N+ + ++ VEP + + W G++ +
Sbjct: 390 PAQNYYVKSSSLNVRSGAGMNYEVIGVVEPNQKIQVVGQQAGWYKINYNGKTGFVGMNYL 449
>gi|228968352|ref|ZP_04129347.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228791318|gb|EEM38925.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 580
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 349
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 350 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 409
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 WSKINYNGQTGYIGTRYL 427
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGE 239
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 VQDWFKINYAGQTAYISKDYV 260
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 264 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 323
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 SENGWFKVNYQGKTGFVSSEFV 345
>gi|229032854|ref|ZP_04188809.1| Enterotoxin [Bacillus cereus AH1271]
gi|228728399|gb|EEL79420.1| Enterotoxin [Bacillus cereus AH1271]
Length = 583
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKN 107
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + + + + P+ S + +V G L + W +
Sbjct: 108 GASNSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQALNVIGQENGWVKINHNGQ 167
Query: 176 EGWIKKQKIWGI 187
G++ + + G+
Sbjct: 168 VGYVSGEFVSGV 179
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 348
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 349 GGTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 408
Query: 164 SGEWCFGYNLDTEGWI 179
+ W G+I
Sbjct: 409 NSGWSKINYNGQNGYI 424
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQALNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++ T N + + P V V G ++ +
Sbjct: 181 SNAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVAKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQAAYVSKDYV 260
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T V + + KG V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VAKGQVVQVVGEVQDWFKI-NYAGQAAYVSKDYVTKG 263
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 264 GSNDNVTQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 323
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 ENGWFKVNYQGKTGFVSSEFV 344
>gi|229147765|ref|ZP_04276108.1| Enterotoxin [Bacillus cereus BDRD-ST24]
gi|228635778|gb|EEK92265.1| Enterotoxin [Bacillus cereus BDRD-ST24]
Length = 577
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 STGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGSIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|229056492|ref|ZP_04195900.1| Peptidase, M23/M37 [Bacillus cereus AH603]
gi|228720817|gb|EEL72372.1| Peptidase, M23/M37 [Bacillus cereus AH603]
Length = 386
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P +++ + A+ N R P +++ L G + + E +W +I +G IG++
Sbjct: 103 QPKSQYI-VNANALNVRSEPNTESSIL-DILPNGQFITIQGEQGDWYKI-LHNGQIGYVQ 159
Query: 112 KSLLSGKRS-----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
K+ +S + V T +N+ ++ ++ G + + E G
Sbjct: 160 KTFVSNGSTPLVKGVTVQGSPSYTVATTKLNVRSNASTSGTLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 36 LAPILALSHEKEIFEKKP-LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L P + S + K+P + +K ++ + PV +++
Sbjct: 18 LLPSMGESDIQTAAAKQPSTVKTGYVKIDNVALHQNSHTDSAII-DTIRFNSPVTILETT 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++W ++ + G++ K + K++ V P ++ N +N+ +P+ +S I+ +
Sbjct: 77 QDWYKVS-VNNKTGYMKKDAILFKKN--VQPKSQYIVNANALNVRSEPNTESSILDILPN 133
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +TI+ G+W + G+++K +
Sbjct: 134 GQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
>gi|218900353|ref|YP_002448764.1| putative cell wall hydrolase [Bacillus cereus G9842]
gi|218545124|gb|ACK97518.1| putative cell wall hydrolase [Bacillus cereus G9842]
Length = 582
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SG 117
+ AS + R G + ++ G + V+ E W +I + +G G+++ + SG
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVLKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 349
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 350 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 409
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 WSKINYNGQTGYIGTRYL 427
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGE 239
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 VQDWFKINYAGQTAYISKDYV 260
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 264 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 323
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 SENGWFKVNYQGKTGFVSSEFV 345
>gi|229050901|ref|ZP_04194452.1| Enterotoxin [Bacillus cereus AH676]
gi|228722446|gb|EEL73840.1| Enterotoxin [Bacillus cereus AH676]
Length = 580
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLSVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L++
Sbjct: 262 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLSVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|228955478|ref|ZP_04117483.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228804270|gb|EEM50884.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 578
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 51 VNASVLHVRAGSNTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGQTGFVSGEFVSKSG 108
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+A VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 347
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 348 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 407
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 408 WSKINYNGQTGYIGTRYL 425
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 321
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 SENGWFKVNYQGKTGFVSSEFV 343
>gi|99082271|ref|YP_614425.1| SH3, type 3 [Ruegeria sp. TM1040]
gi|99038551|gb|ABF65163.1| SH3 type 3 [Ruegeria sp. TM1040]
Length = 227
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 31 AIYFYLAPILALSHE--KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
++ L I A + E ++ E +P+ F ++ASRAN R+GPG Y V+ L G V
Sbjct: 135 SVEAGLGAITAEAPEPTRQAIEPEPIGEFRKVRASRANVRLGPGTNYPVLMQLLA-GDNV 193
Query: 89 EVVKEYE-NWRQIRDFD-GTIGWINKSLLSGKRS 120
V+ + E W + + G +GWI SLLS K+S
Sbjct: 194 RVLNDDESGWSLLENPKTGQVGWIAASLLSAKQS 227
>gi|229063892|ref|ZP_04200193.1| Enterotoxin [Bacillus cereus AH603]
gi|228716362|gb|EEL68070.1| Enterotoxin [Bacillus cereus AH603]
Length = 587
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ AS + R G + V+ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVYN-GQSLNVIGEENGWFKI-NVNGQTGFVSGEFVSKN 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + VS + + P+ S + +V G L + W +
Sbjct: 109 GATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQT 168
Query: 177 GWIKKQKIWGI 187
G++ Q + G
Sbjct: 169 GYVSSQFVSGA 179
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 297 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGYVSSEFVKFVK 354
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 355 GGTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 414
Query: 164 SGEWCFGYNLDTEGWI 179
+ W G+I
Sbjct: 415 NSGWSKINYNGQTGYI 430
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ E W +I + +G G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGEENGWVKI-NHNGQTGYVSSQFVSGAS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + T N + + P V V+ G ++ +
Sbjct: 181 SNTGSTSNNNNSNNEATVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKQGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYLSKDYV 260
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 23/147 (15%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP + V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHPTVGSVKQGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 263
Query: 118 --------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ V N + + P ++ V G
Sbjct: 264 GSNENVTQGNNQEQNNKPEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTT 323
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 324 LNVVGSENGWFKVNYQGKTGYVSSEFV 350
>gi|229113498|ref|ZP_04242948.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|228670016|gb|EEL25409.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
Length = 596
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ R GP T++ ++K V VV E E+W +I+ ++ T ++NK
Sbjct: 41 VTVNVDALRVRTGPSTSNTILGL-VSKEQSVPVVDETEDWYKIK-YNNTEAYVNKEY--- 95
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N + + + P + I+ V G +L + + W + +
Sbjct: 96 ------ATPNHIKVSTTTLRVRTGPSTSNSILGLVGEGEILQVTGEADGWYKIKYNNRDA 149
Query: 178 WIKKQKI 184
++ K +
Sbjct: 150 YVSKDYV 156
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E + ++ P + + + R GP +++ + +G ++V E + W +I+
Sbjct: 86 NTEAYVNKEYATPNHIKVSTTTLRVRTGPSTSNSILGL-VGEGEILQVTGEADGWYKIK- 143
Query: 103 FDGTIGWINKSLLSGKRSAI------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++ +++K +S +S + V T N + + P + +V+ + G
Sbjct: 144 YNNRDAYVSKDYVSINKSLVKSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKGQ 203
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +W + +I K +
Sbjct: 204 VVQVVGEVQDWYRVKLNEGFAYINKDYV 231
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP + + VV + KG V+VV E ++W +++ +G +INK +S
Sbjct: 177 TVNVSSLRVRTGPSMSHPVVSV-MNKGQVVQVVGEVQDWYRVKLNEG-FAYINKDYVSRG 234
Query: 119 -----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ V + + + P ++ V G L + + W
Sbjct: 235 TNNTANLPQSIQTESVQQNGTYIVDAAVLRVRTGPANYHPVIGGVLKGQSLQVVDIENGW 294
Query: 168 CFGYNLDTEGWI 179
+ G++
Sbjct: 295 YKIKYNNRTGYV 306
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+E +++P + +K+S N R G G+ Y V+ + ++VV + W +I
Sbjct: 372 QQPTREQEKQEPAQNYY-VKSSSLNVRSGAGMNYEVIGV-VEPNQKIQVVGQQAGWYKI- 428
Query: 102 DFDGTIGWINKSLLSGKRSAIV---SPWNRKTNNPIYINLYKKPDIQS 146
+++G G++ + LS + A V P T N + + KP S
Sbjct: 429 NYNGKTGFVGMNYLSKTKVATVEEQPPSEVGTTNENTASGFIKPAAGS 476
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 17/60 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +N+ + ++ VEP + + W G++ +
Sbjct: 383 PAQNYYVKSSSLNVRSGAGMNYEVIGVVEPNQKIQVVGQQAGWYKINYNGKTGFVGMNYL 442
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + S +V+ NR T N + + P + I+ V + + + + +W +T
Sbjct: 28 SKQASDVVTHENRVTVNVDALRVRTGPSTSNTILGLVSKEQSVPVVDETEDWYKIKYNNT 87
Query: 176 EGWIKKQ 182
E ++ K+
Sbjct: 88 EAYVNKE 94
>gi|229136045|ref|ZP_04264801.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228647366|gb|EEL03445.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 581
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ AS + R G + V+ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVYN-GQSLNVIGEENGWFKI-NVNGQTGFVSGEFVSKN 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + VS + + P+ S + +V G L + W +
Sbjct: 109 GATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLKVIGEENGWVKINHNGQT 168
Query: 177 GWIKKQKIWGI 187
G++ Q + G
Sbjct: 169 GYVSSQFVSGA 179
Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGYVSSEFVKFVK 348
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 349 GGTTTPEQPKQPEQPKQPEQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 408
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+ W G+I + +
Sbjct: 409 NSGWSKINYNGQTGYIGTRYL 429
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G ++V+ E W +I + +G G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLKVIGEENGWVKI-NHNGQTGYVSSQFVSGAS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + T N + + P V V+ G ++ +
Sbjct: 181 SNTGSTSNNNNSNNEATVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKQGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYLSKDYV 260
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP + V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHPTVGSVKQGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 263
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 264 GSNENVTQGNNQGQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 323
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 ENGWFKVNYQGKTGYVSSEFV 344
>gi|164686991|ref|ZP_02211019.1| hypothetical protein CLOBAR_00617 [Clostridium bartlettii DSM
16795]
gi|164603876|gb|EDQ97341.1| hypothetical protein CLOBAR_00617 [Clostridium bartlettii DSM
16795]
Length = 536
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 20/146 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS--- 116
++ N R GPG Y + T L+KG VE+V + W +I+ ++GT G+++ + +
Sbjct: 337 TTAKLNVRKGPGTKYAKMGT-LSKGAKVEIVSKLSNGWYKIK-YNGTYGYVSGAYVKLDS 394
Query: 117 --GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL 173
K +N+ P + + G + + E S W
Sbjct: 395 EQPKPGEDEKIIATGKTTVSSLNVRSGPSSNYSKLGILTKGTKVEVVERYSNGWYKIKYK 454
Query: 174 DTEGWIKKQKIWGIY------PGEVF 193
+ G++ G Y GEV
Sbjct: 455 GSYGYVS-----GAYVSLDGSKGEVI 475
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 15/72 (20%)
Query: 57 FVTIKASR------------ANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDF 103
+V++ S+ N R G G Y + +L KG VE+V + W +I+ F
Sbjct: 464 YVSLDGSKGEVIATGKTTAGLNVRSGAGTGYKKIG-HLNKGTKVEIVTKLSNGWYKIK-F 521
Query: 104 DGTIGWINKSLL 115
+ + G+++ +
Sbjct: 522 NSSYGYVSGDYV 533
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 6/59 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ K P + + + G + I S W T G++ G Y
Sbjct: 336 KTTAKLNVRKGPGTKYAKMGTLSKGAKVEIVSKLSNGWYKIKYNGTYGYVS-----GAY 389
>gi|229153393|ref|ZP_04281571.1| Enterotoxin [Bacillus cereus m1550]
gi|228629997|gb|EEK86648.1| Enterotoxin [Bacillus cereus m1550]
Length = 577
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + +G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 STGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
>gi|229010154|ref|ZP_04167364.1| Peptidase, M23/M37 [Bacillus mycoides DSM 2048]
gi|228751004|gb|EEM00820.1| Peptidase, M23/M37 [Bacillus mycoides DSM 2048]
Length = 384
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P +++ + A+ N R P +++ L G + + E +W +I +G IG++
Sbjct: 103 QPKSQYI-VNANALNVRSEPNTESSIL-DILPNGQFITIQGEQGDWYKI-LHNGQIGYVQ 159
Query: 112 KSLLSGKRS-----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
K+ +S + V T +N+ ++ ++ G + + E G
Sbjct: 160 KTFVSNGSTPLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 36 LAPILALSHEKEIFEKKP-LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L P + S + K+P + +K +V + PV +++
Sbjct: 18 LLPSMGESGIQTAAAKQPSTVKTGYVKIDNVALHQNSHTDSAIV-DTIRFNSPVTILETV 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++W ++ + G++ K + K++ V P ++ N +N+ +P+ +S I+ +
Sbjct: 77 QDWYKVS-VNNKTGYMKKDAILFKKN--VQPKSQYIVNANALNVRSEPNTESSILDILPN 133
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +TI+ G+W + G+++K +
Sbjct: 134 GQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
>gi|229165665|ref|ZP_04293433.1| Peptidase, M23/M37 [Bacillus cereus AH621]
gi|228617666|gb|EEK74723.1| Peptidase, M23/M37 [Bacillus cereus AH621]
Length = 386
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P +++ + A+ N R P +++ L G + + E +W +I +G IG++
Sbjct: 103 QPKSQYI-VNANALNVRSEPNTESSIL-DILPNGQFITIQGEQGDWYKI-LHNGQIGYVQ 159
Query: 112 KSLLSGKRS-----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
K+ +S + V T +N+ ++ ++ G + + E G
Sbjct: 160 KTFVSNGSTPLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 36 LAPILALSHEKEIFEKKP-LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L P + S + K+P + +K ++ + PV +++
Sbjct: 18 LLPSMGESDIQTAAAKQPSTVKTGYVKIDNVALHQNSHTDSAII-DTIRFNSPVTILETV 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++W ++ + G++ K + K++ V P ++ N +N+ +P+ +S I+ +
Sbjct: 77 QDWYKVS-VNNKTGYMKKDAILFKKN--VQPKSQYIVNANALNVRSEPNTESSILDILPN 133
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +TI+ G+W + G+++K +
Sbjct: 134 GQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
>gi|163938646|ref|YP_001643530.1| peptidase M23B [Bacillus weihenstephanensis KBAB4]
gi|229131674|ref|ZP_04260551.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST196]
gi|163860843|gb|ABY41902.1| peptidase M23B [Bacillus weihenstephanensis KBAB4]
gi|228651728|gb|EEL07688.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST196]
Length = 386
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+P +++ + A+ N R P +++ L G + + E +W +I +G IG++
Sbjct: 103 QPKSQYI-VNANALNVRSEPNTESSIL-DILPNGQFITIQGEQGDWYKI-LHNGQIGYVQ 159
Query: 112 KSLLSGKRS-----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
K+ +S + V T +N+ ++ ++ G + + E G
Sbjct: 160 KTFVSNGSTPLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 36 LAPILALSHEKEIFEKKP-LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L P + S + K+P + +K +V + PV +++
Sbjct: 18 LLPSMGESDIQTAAAKQPSTVKTGYVKIDNVALHQNSHTDSAIV-DTIRFNSPVTILETV 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++W ++ + G++ K + K++ V P ++ N +N+ +P+ +S I+ +
Sbjct: 77 QDWYKVS-VNNKTGYMKKDAILFKKN--VQPKSQYIVNANALNVRSEPNTESSILDILPN 133
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +TI+ G+W + G+++K +
Sbjct: 134 GQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
>gi|229169943|ref|ZP_04297637.1| Enterotoxin [Bacillus cereus AH621]
gi|228613529|gb|EEK70660.1| Enterotoxin [Bacillus cereus AH621]
Length = 580
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ AS + R G + V+ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVYN-GQSLNVIGEENGWFKI-NVNGQTGFVSGEFVSKN 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + VS + + P+ S + +V G L + W +
Sbjct: 109 GATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQT 168
Query: 177 GWIKKQKIWGI 187
G++ Q + G
Sbjct: 169 GYVSSQFVSGA 179
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGYVSSEFVKFVK 348
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 349 GGTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 408
Query: 164 SGEWCFGYNLDTEGWI 179
+ W G+I
Sbjct: 409 NSGWSKINYNGQTGYI 424
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 17/140 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ E W +I + +G G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGEENGWVKI-NHNGQTGYVSSQFVSGAS 180
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + T N + + P V V+ G ++ +
Sbjct: 181 SNTGSTSNNNNSNNEATVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKQGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 241 QDWFKINYAGQTAYLSKDYV 260
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP + V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHPTVGSVKQGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 263
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 264 GSNENVTQGNNQEQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 323
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 ENGWFKVNYQGKTGYVSSEFV 344
>gi|163942917|ref|YP_001647801.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|163865114|gb|ABY46173.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
Length = 578
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
T+ AS + R G + V+ G + V+ E W +I + +G G+++ +S
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVYN-GQSLNVIGEENGWFKI-NVNGQTGFVSGEFVSKN 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + VS + + P+ S + +V G L + W +
Sbjct: 109 GATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQT 168
Query: 177 GWIKKQKIWGI 187
G++ Q + G
Sbjct: 169 GYVSSQFVSGA 179
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 288 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGYVSSEFVKFVK 345
Query: 120 SAIVSPWNRKTN----------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P K N +N+ I+ + G + +
Sbjct: 346 GGTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISE 405
Query: 164 SGEWCFGYNLDTEGWI 179
+ W G+I
Sbjct: 406 NSGWSKINYNGQTGYI 421
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 14/137 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A R P +V + +G + V+ E W +I + +G G+++ +SG
Sbjct: 123 VTADVLRVRTAPNTSSSVSGR-VYEGQTLNVIGEENGWVKI-NHNGQTGYVSSQFVSGAS 180
Query: 118 ----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + T N + + P V V+ G ++ + +W
Sbjct: 181 SNTGSTSNSNNEATVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKQGQVVQVVGEVQDW 240
Query: 168 CFGYNLDTEGWIKKQKI 184
++ K +
Sbjct: 241 FKINYAGQTAYLSKDYV 257
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP + V + + V+VV E ++W +I ++ G +++K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHPTVGSVKQGQV-VQVVGEVQDWFKI-NYAGQTAYLSKDYVTKG 260
Query: 119 RS---------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S V N + + P ++ V G L +
Sbjct: 261 GSNENVTQGNNQEQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 320
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 321 ENGWFKVNYQGKTGYVSSEFV 341
>gi|30023266|ref|NP_834897.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|229130481|ref|ZP_04259437.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|296505657|ref|YP_003667357.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|29898827|gb|AAP12098.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|228652820|gb|EEL08702.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|296326709|gb|ADH09637.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 577
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGTIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|299538017|ref|ZP_07051303.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus fusiformis
ZC1]
gi|298726599|gb|EFI67188.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus fusiformis
ZC1]
Length = 616
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Query: 66 NSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + T L K +V+ E W ++ +G GW+ +S + +
Sbjct: 494 NMRTYPNTADNASIMTNLPKDTSFKVLGENGGWLKVS-VNGQEGWVIDDYVSLENGLQIV 552
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP-----GVLLTIRE--CSGEWCFGYNLDTEG 177
N I +N+ +P S I+ V+P GV+ E +G W G
Sbjct: 553 NMN------ITLNVRSEPSTTSAILGTVKPNGFIIGVVDDKGEFIKNGAWYQVLYNGKTG 606
Query: 178 WIKKQKI 184
W+ I
Sbjct: 607 WVHGDYI 613
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 15/76 (19%)
Query: 57 FVTIKAS--------RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN------WRQIRD 102
+V+++ N R P ++ T G + VV + W Q+
Sbjct: 542 YVSLENGLQIVNMNITLNVRSEPSTTSAILGTVKPNGFIIGVVDDKGEFIKNGAWYQV-L 600
Query: 103 FDGTIGWINKSLLSGK 118
++G GW++ + K
Sbjct: 601 YNGKTGWVHGDYIVKK 616
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDI--QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
I +N+ P+ + I+ + + +G W EGW+
Sbjct: 483 AGATGKTTINLNMRTYPNTADNASIMTNLPKDTSFKVLGENGGWLKVSVNGQEGWVIDDY 542
Query: 184 I 184
+
Sbjct: 543 V 543
>gi|228961490|ref|ZP_04123101.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228798204|gb|EEM45206.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 578
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTSYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQEQNNNGSIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|229112643|ref|ZP_04242179.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228670775|gb|EEL26083.1| Enterotoxin [Bacillus cereus Rock1-15]
Length = 577
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKS 107
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P+ S + +V G L + W +
Sbjct: 108 GAANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQV 167
Query: 177 GWI 179
G++
Sbjct: 168 GYV 170
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 346
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 347 GGTTTPEQPKQPEKPNQGTIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 406
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 WSKINYNGQTGYIGTRYL 424
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGGS 179
Query: 120 SA--------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + T N + + P V V+ G ++ +
Sbjct: 180 SNGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQ 239
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 DWFKINYAGQTAYISKDYV 258
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + + V+VV E ++W +I ++ G +I+K ++
Sbjct: 204 TVNVSSLRVRTGPSTSHTTVGSVKKGQV-VQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 261
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + N + + P ++ V G L +
Sbjct: 262 GSNENVTEGNKQGQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVGS 321
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 322 ENGWFKVNYQGKTGFVSSEFV 342
>gi|295705600|ref|YP_003598675.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294803259|gb|ADF40325.1| bacterial SH3 domain protein [Bacillus megaterium DSM 319]
Length = 442
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ ++ + + K+ L FTL L L H + N R
Sbjct: 1 MTEVNRQTFYKKLAVTGLAFTLVGAGTLG--LHSLHFTGEPTVASAAAETYTTTANLNIR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
GP ++ T + +G + V+ + W ++ + G G+++ + S+
Sbjct: 59 SGPSTSNAIIAT-VKQGTQLTVIGQAASGWLKVS-YQGKTGYVSSEYVKKSASSTT---- 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P S IV V+ G LT + + W G++ Q +
Sbjct: 113 KTYVTTANLNIRSGPSTSSAIVVTVKQGAQLTSTEQAANGWLKVSYQGKTGYVSTQYV 170
>gi|163938712|ref|YP_001643596.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163860909|gb|ABY41968.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 478
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
+F+ +KI+ ++ M I++ + A F L + + I
Sbjct: 18 VFSANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHIPYLTGKAP 188
>gi|229074500|ref|ZP_04207529.1| 3D domain protein [Bacillus cereus Rock4-18]
gi|228708620|gb|EEL60764.1| 3D domain protein [Bacillus cereus Rock4-18]
Length = 457
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T E +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|319650659|ref|ZP_08004798.1| hypothetical protein HMPREF1013_01403 [Bacillus sp. 2_A_57_CT2]
gi|317397516|gb|EFV78215.1| hypothetical protein HMPREF1013_01403 [Bacillus sp. 2_A_57_CT2]
Length = 635
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P + S + I K +V++ AN R GP + ++V+ TKG + +
Sbjct: 131 LAGWIPAESASANQAINTKL----YVSV--DVANMRSGPSLSHSVI-DQATKGAELTAFE 183
Query: 93 EYEN-----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++ W +++ G+I W+++S++S + S VS + LY
Sbjct: 184 TAKDSTGDLWYKVKTSAGSIAWVHESVVSKQPS--VSVGTTMLVGTMNAALYAGASYDYK 241
Query: 148 IVAKVEPG----VLLTIRECSGE-WCFG-YNLDTEGWIKKQKI 184
I ++ VL G+ W GW + ++
Sbjct: 242 ISERLPYNSKVTVLGEFTNSLGQRWIRIKSAAGKTGWTPEYEL 284
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ E E+ + + ++V K R G G Y V YL + ++++++ W +
Sbjct: 278 WTPEYELVTSQNVFKYVFAKKGAV-IRKGAGTNYGVS-AYLAENDSLKILRKLNGWLNVE 335
Query: 102 DFDGTIGWINKSL---LSGKR 119
+ GT GW+ ++ +S KR
Sbjct: 336 NAKGTRGWVLETQTTTVSAKR 356
>gi|229916898|ref|YP_002885544.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
gi|229468327|gb|ACQ70099.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
Length = 590
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-------SGK 118
N R+ G + V+ T + KG + ++ +W ++ + G GW++ L S
Sbjct: 101 NMRVAGGTWHRVLLT-IPKGTTLTPIQSTGSWTKVS-YGGQTGWVHNDYLQKASMSSSTD 158
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + V+P + +NL ++ ++ + G +T+ G W G+
Sbjct: 159 KPSTVTPSSATAQTKANLNLRSSKSTKTTVLLTIPKGKTVTVLSVEGSWSKVKYGSKTGY 218
Query: 179 IKKQKI 184
+ +
Sbjct: 219 VANTYL 224
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 17/192 (8%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
K + L + K+ S +A + A + + + T A+
Sbjct: 194 KGKTVTVLSVEGSWSKVKYGSKTGYVANTYLTTSGAA--TPTTPSTGQSINQQFTTTAN- 250
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R G G+ Y +V T + G V+ K+ +W + ++G G+++ L + +
Sbjct: 251 LNVRQGAGVGYPLVTT-IPNGTVVKATKQSGSWYYVT-YNGKSGYVSAGYLKQTSTTPSN 308
Query: 125 PWNRKTNNPI------------YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
P + + +N+ + I+ V+ G L + + S W Y
Sbjct: 309 PAPNEGDAGAGNAAVDYIVNTPSLNVRSSASTSATIIGSVKAGQTLRVVQSSKGWLQIYY 368
Query: 173 LDTEGWIKKQKI 184
+T G++ +
Sbjct: 369 GNTVGFVASAYV 380
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R TV+ T + KG V V+ +W +++ + G++ + L+ +
Sbjct: 172 TKANLNLRSSKSTKTTVLLT-IPKGKTVTVLSVEGSWSKVK-YGSKTGYVANTYLTTSGA 229
Query: 121 AIVSPWNRKTN------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
A + + + +N+ + + +V + G ++ + SG W +
Sbjct: 230 ATPTTPSTGQSINQQFTTTANLNVRQGAGVGYPLVTTIPNGTVVKATKQSGSWYYVTYNG 289
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 290 KSGYVSAGYL 299
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 17/50 (34%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++ + G LT + +G W GW+ +
Sbjct: 99 ALNMRVAGGTWHRVLLTIPKGTTLTPIQSTGSWTKVSYGGQTGWVHNDYL 148
>gi|164687047|ref|ZP_02211075.1| hypothetical protein CLOBAR_00673 [Clostridium bartlettii DSM
16795]
gi|164603932|gb|EDQ97397.1| hypothetical protein CLOBAR_00673 [Clostridium bartlettii DSM
16795]
Length = 791
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + SR N R + ++ L G VE+V E NW +I ++ G +I+K +
Sbjct: 66 VKVGNSRLNVRNKASLSGKIIGK-LYTGNKVEIVGENSNWYEI-NYKGGTAYISKKYVKT 123
Query: 118 KRSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLD 174
+ + + I N+ P + K+ G + + +CS W
Sbjct: 124 SSTTVTEVEDCSDVFKAQISFNVRTGPSTSYAKIGKLAAGQVFQVTGKCSNGWYQIKFGS 183
Query: 175 TEGWIKKQKI 184
G+I + +
Sbjct: 184 KVGYISSKYL 193
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 22/65 (33%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S I + +N+ K + I+ K+ G + I + W +I
Sbjct: 57 SKITIKVGKVKVGNSRLNVRNKASLSGKIIGKLYTGNKVEIVGENSNWYEINYKGGTAYI 116
Query: 180 KKQKI 184
K+ +
Sbjct: 117 SKKYV 121
>gi|294500246|ref|YP_003563946.1| hypothetical protein BMQ_3490 [Bacillus megaterium QM B1551]
gi|294350183|gb|ADE70512.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 444
Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 10/178 (5%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ ++ +++ K+ L FTL L L + + N R
Sbjct: 1 MTEVNKQRFYKKLAVTGLAFTLVGAGTLG--LHSLNFTGEPTVASAAAETYTTTANLNIR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
GP ++ T + +G + VV + W ++ + G G+++ + S+
Sbjct: 59 SGPSTSNAIIAT-VKQGTQLTVVGQAASGWLKVS-YQGKTGYVSSEYVKKSASSTT---- 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P S IV V+ G LT + + W G++ Q +
Sbjct: 113 KTYVTTANLNIRSGPSTSSAIVVTVKQGTQLTSTEQAANGWLKVSYQGKTGYVSTQYV 170
>gi|228903707|ref|ZP_04067827.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
gi|228855975|gb|EEN00515.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
Length = 580
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+ AS + R G I + ++ G + V+ E W +I + +G G+++ +S G
Sbjct: 51 VNASVLHVRAGSSISHDIISRVYN-GQSLNVIGEENGWFKI-NINGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ ++ G G+++ + +
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVLN-GTTLNVVGSENGWFKV-NYQGKTGFVSSEFVKFVK 349
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 350 GGTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 409
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 WSKINYNGQTGYIGTRYL 427
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R P +V + G + V+ + W +I + +G +G+++ +SG
Sbjct: 122 VTADVLRVRTAPNTSSSVSGR-VYAGQTLNVIGQENGWVKI-NHNGQVGYVSGEFVSGVS 179
Query: 120 SA----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S + T N + + P V V G ++ +
Sbjct: 180 SNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGE 239
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 240 VQDWFKINYAGQTAYISKDYV 260
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +T V + +TKG V+VV E ++W +I ++ G +I+K ++
Sbjct: 206 TVNVSSLRVRTGPSTSHTTVGS-VTKGQVVQVVGEVQDWFKI-NYAGQTAYISKDYVTKG 263
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P ++ V G L +
Sbjct: 264 GSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTLNVVG 323
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 324 SENGWFKVNYQGKTGFVSSEFV 345
>gi|47564730|ref|ZP_00235774.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47558103|gb|EAL16427.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 458
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 21 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 73
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 74 ----TDVLNVRENPTTESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 128
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 129 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 178
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 179 AYVHVPYLTGKAP 191
>gi|258516739|ref|YP_003192961.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
gi|257780444|gb|ACV64338.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
Length = 476
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 26/166 (15%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+Y + K K L + A+ + +LA S ++ N R
Sbjct: 1 MYGMLKGKM--KGLFGFWVLFAALLLLPSGVLAASVA-------------SVNGDNINVR 45
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GPG +V L KG V V+++ +W +++ +G GW+ S L+ +
Sbjct: 46 EGPGTTSDIVGE-LNKGDSVTVLEKSGDWYKVKLSNGD-GWVLSSFLN---------LSE 94
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ ++ LY V + EW
Sbjct: 95 QNSDDSADWLYAGAGSNDNQVKPAQTAATAQKEVTLPEWLRPREGK 140
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ + L S +++ N IN+ + P S IV ++ G +T+ E SG+W
Sbjct: 16 WVLFAALLLLPSGVLAASVASV-NGDNINVREGPGTTSDIVGELNKGDSVTVLEKSGDWY 74
Query: 169 FGYNLDTEGWIKKQKI 184
+ +GW+ +
Sbjct: 75 KVKLSNGDGWVLSSFL 90
>gi|222094546|ref|YP_002528606.1| enterotoxin / cell-wall binding protein [Bacillus cereus Q1]
gi|221238604|gb|ACM11314.1| enterotoxin / cell-wall binding protein [Bacillus cereus Q1]
Length = 467
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + F
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAET---------F 68
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT N R P VV L G V V+ W +++ G +I+
Sbjct: 69 VT--TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|217958307|ref|YP_002336855.1| peptidase, M23/M37 family [Bacillus cereus AH187]
gi|229137525|ref|ZP_04266132.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST26]
gi|217065747|gb|ACJ79997.1| peptidase, M23/M37 family [Bacillus cereus AH187]
gi|228645885|gb|EEL02112.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST26]
Length = 386
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|42779871|ref|NP_977118.1| M24/M37 family peptidase [Bacillus cereus ATCC 10987]
gi|42735788|gb|AAS39726.1| peptidase, M23/M37 family [Bacillus cereus ATCC 10987]
Length = 384
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|47564656|ref|ZP_00235700.1| cell wall endopeptidase, family M23/M37 [Bacillus cereus G9241]
gi|47558029|gb|EAL16353.1| cell wall endopeptidase, family M23/M37 [Bacillus cereus G9241]
Length = 386
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSG 117
+K + + + + V +++ +W ++ + +G++ K LL
Sbjct: 43 VKVDQVALHTKDNTNSSSI-DTIRFNTKVNILETTNDWYKVS-VNNKVGYVQKDSILLKN 100
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K + N+ N +N+ +P+++S I+ + G +TI+E GEW + G
Sbjct: 101 K----LQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTG 156
Query: 178 WIKKQKI 184
+++K +
Sbjct: 157 YVQKAFV 163
>gi|170689160|ref|ZP_02880358.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|170666908|gb|EDT17673.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
Length = 386
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGNFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGNFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 48 VALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|324324766|gb|ADY20026.1| peptidase, M23/M37 family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 386
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNMKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|229095435|ref|ZP_04226426.1| 3D domain protein [Bacillus cereus Rock3-29]
gi|228687981|gb|EEL41868.1| 3D domain protein [Bacillus cereus Rock3-29]
Length = 442
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T E +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228951290|ref|ZP_04113400.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228808343|gb|EEM54852.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 453
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 26/190 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWG 186
++ + G
Sbjct: 159 AYVHVPYLTG 168
>gi|319654059|ref|ZP_08008151.1| hypothetical protein HMPREF1013_04771 [Bacillus sp. 2_A_57_CT2]
gi|317394252|gb|EFV74998.1| hypothetical protein HMPREF1013_04771 [Bacillus sp. 2_A_57_CT2]
Length = 513
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 15/146 (10%)
Query: 47 EIFEKKPLPRFVTIK---ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WR 98
I +P P K A + R G Y++V Y+ K V ++ ++N W
Sbjct: 168 PIATTRPTPSATESKLVQADKVAVRKGATESYSIV-KYVYKNQNVTIIDTFKNAAGKTWY 226
Query: 99 QIRDFDGTIGWINKSLLSGKRSAI-----VSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ D GWI S + S V+ T + +N+ P Q ++ K+
Sbjct: 227 R-TDLGNIKGWIPADAFSTEESMSPETKPVNSIKMATVSADILNVRLGPSTQYDVIGKLS 285
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWI 179
G + + W G++
Sbjct: 286 NGNTIQVYSVEDNWAKVQFGGQTGYV 311
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINK 112
I ++ N R G I Y +V T L+KG V+++ ++N W QI T GW+ +
Sbjct: 106 AAITENQVNVRKGATISYAIV-TKLSKGTKVKIIDNFKNSSNELWYQIE-VGSTKGWVIQ 163
Query: 113 SLLSGKRSAIVSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CSG 165
+ L+ + +P ++ + + K IV V +TI +
Sbjct: 164 NYLNPIATTRPTPSATESKLVQADKVAVRKGATESYSIVKYVYKNQNVTIIDTFKNAAGK 223
Query: 166 EWCFGYNLDTEGWIKKQK 183
W + +GWI
Sbjct: 224 TWYRTDLGNIKGWIPADA 241
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 15/140 (10%)
Query: 58 VTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWIN 111
V++ + R G Y +V T L G V V+ E+ E W ++ D T GW N
Sbjct: 29 VSMLVDQSVEIRKGATHYYPLV-TSLPIGKSVTVIDEFTNTTGERWYRV-DLGNTKGWGN 86
Query: 112 KSLLSGKRSAIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CS 164
+ K + V + +N+ K I IV K+ G + I + +
Sbjct: 87 ARHFTSKHNVQVPLQAGQKAAITENQVNVRKGATISYAIVTKLSKGTKVKIIDNFKNSSN 146
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W T+GW+ + +
Sbjct: 147 ELWYQIEVGSTKGWVIQNYL 166
>gi|226313519|ref|YP_002773413.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226096467|dbj|BAH44909.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 370
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 21/174 (12%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
Q SL+ L + + + + K + A+ N R P +VV T +
Sbjct: 7 QASLLCGLWLSLSWPFHTEPAQAASVIQAKVV-------ATSLNVRSEPAPNASVVAT-V 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----------SGKRSAIVSPWNRKTN 131
+G V + E W +IR ++ +GW+ L S + V+ + T
Sbjct: 59 PQGAVVTITDEAYGWAKIR-YNQKVGWVAGYYLQKGAVTSAGSASSPANTAVAKSQQGTV 117
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + K P IV + G + I + G+W + GW+ I
Sbjct: 118 LADSLRMRKGPSTSHEIVLSLPRGTRVDILKKQGDWIQARTSNGQTGWVSATYI 171
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A R GP + +V L +G V+++K+ +W Q R +G GW++ + +
Sbjct: 116 TVLADSLRMRKGPSTSHEIV-LSLPRGTRVDILKKQGDWIQARTSNGQTGWVSATYIGDA 174
Query: 119 RSAIVSPWNRKTNNPIY 135
+ +P + T +P
Sbjct: 175 KVNANAPVTKSTKSPGL 191
>gi|49476886|ref|YP_034979.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49328442|gb|AAT59088.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 386
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKIS-HNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|228938059|ref|ZP_04100679.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228977537|ref|ZP_04137929.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228782181|gb|EEM30367.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228821544|gb|EEM67549.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 462
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 126 TYYV----------TANVLNVRASANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|229125302|ref|ZP_04254401.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228658150|gb|EEL13891.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
Length = 633
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 65/174 (37%), Gaps = 14/174 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL---PRFVTIKASRANSRIG 70
++K + + S+ I A S + + + + VT+ A R G
Sbjct: 1 MKKILASMAVASVAGGTVIGTAQAQTSIASEDTQSKQASDVVTHENQVTVNADALRVRTG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P T++ ++K V VV E ++W +I+ ++ ++NK + N
Sbjct: 61 PSTSNTILGL-VSKEQSVPVVDETDDWYKIK-YNNMEAYVNKEY---------ATPNHIK 109
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + P + + V G +L + + W + + ++ K+ +
Sbjct: 110 VSTTTLRVRTGPSTSNSTLGLVGEGEILQVTGEADGWYKIKYNNRDAYVSKEYV 163
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
E + ++ P + + + R GP + + + +G ++V E + W +I+ ++
Sbjct: 95 EAYVNKEYATPNHIKVSTTTLRVRTGPSTSNSTLGL-VGEGEILQVTGEADGWYKIK-YN 152
Query: 105 GTIGWINKSLLSGKRSAI------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+++K +S +S I V T N + P + +V+ + G ++
Sbjct: 153 NRDAYVSKEYVSINKSIINSKKQMVQASGNYTVNVSSLRARTGPSMSHPVVSVMNKGQVV 212
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +W + +I K +
Sbjct: 213 QVVGEVQDWYKIKFNEGFAYINKDYV 238
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S +R GP + + VV + KG V+VV E ++W +I+ +G +INK +S
Sbjct: 184 TVNVSSLRARTGPSMSHPVVSV-MNKGQVVQVVGEVQDWYKIKFNEG-FAYINKDYVSRG 241
Query: 119 -----------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ V + + + P ++ V G L + + W
Sbjct: 242 TNNTSSLPQSLQTESVQKNGTYIVDAAVLRVRTGPANYHPVIGGVLKGQSLQVVDIENGW 301
Query: 168 CFGYNLDTEGWI 179
+ G++
Sbjct: 302 YKIKYNNRTGYV 313
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K+S N R G G+ Y V+ + V+VV + W +I +++G +G++ + LS +
Sbjct: 423 VKSSSLNVRTGAGMNYEVIGV-VEPNQKVQVVGQQAGWYKI-NYNGKVGFVGMNYLSKTK 480
Query: 120 SAIVSPWNRKTNNPIYINLYKKPD 143
A V ++ + I K
Sbjct: 481 VANVEEQPQQQPSEISTTTENKAS 504
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 17/60 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +N+ + ++ VEP + + W G++ +
Sbjct: 417 PAQNYYVKSSSLNVRTGAGMNYEVIGVVEPNQKVQVVGQQAGWYKINYNGKVGFVGMNYL 476
>gi|84684088|ref|ZP_01011990.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84688113|ref|ZP_01015965.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84663876|gb|EAQ10388.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
gi|84667841|gb|EAQ14309.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
Length = 154
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y ++ + G VE ++ W ++R G +GW L R A +
Sbjct: 36 NLRTGPGSQYNII-RKMYHGSAVETLEYANGWVRVRHESGAVGWAFAKYL--VRPAATNV 92
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ N Y+NL P + I+ + G +T+ E SG W + GW ++ +
Sbjct: 93 RYVYSPNDGYLNLRTGPGTRYQIIRPMYNGEAVTLLERSGGWVRVKHQSGAIGWAFEKYL 152
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ A + R+V + N R GPG Y ++ + G V +++
Sbjct: 75 AVGWAFAKYLVRPAATNV---RYVYSPNDGYLNLRTGPGTRYQII-RPMYNGEAVTLLER 130
Query: 94 YENWRQIRDFDGTIGWINKSLL 115
W +++ G IGW + L
Sbjct: 131 SGGWVRVKHQSGAIGWAFEKYL 152
>gi|254739863|ref|ZP_05197555.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Kruger
B]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 48 VALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|228944474|ref|ZP_04106845.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228815142|gb|EEM61392.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|228913413|ref|ZP_04077044.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228932155|ref|ZP_04095041.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229089788|ref|ZP_04221043.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228693413|gb|EEL47119.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228827451|gb|EEM73199.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228846164|gb|EEM91185.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|196036571|ref|ZP_03103965.1| peptidase, M23/M37 family [Bacillus cereus W]
gi|225862702|ref|YP_002748080.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|195990771|gb|EDX54745.1| peptidase, M23/M37 family [Bacillus cereus W]
gi|225787419|gb|ACO27636.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|118476399|ref|YP_893550.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus thuringiensis str. Al Hakam]
gi|196046718|ref|ZP_03113941.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|229183056|ref|ZP_04310286.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
gi|118415624|gb|ABK84043.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus thuringiensis str. Al Hakam]
gi|196022430|gb|EDX61114.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|228600195|gb|EEK57785.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|52144590|ref|YP_082239.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus cereus E33L]
gi|51978059|gb|AAU19609.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus E33L]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQIALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|30260872|ref|NP_843249.1| M24/M37 family peptidase [Bacillus anthracis str. Ames]
gi|47526008|ref|YP_017357.1| M23/37 family peptidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183714|ref|YP_026966.1| M24/M37 family peptidase [Bacillus anthracis str. Sterne]
gi|165872465|ref|ZP_02217099.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167635940|ref|ZP_02394247.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|167641340|ref|ZP_02399592.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170708576|ref|ZP_02899016.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|177654748|ref|ZP_02936536.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190568840|ref|ZP_03021743.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227816404|ref|YP_002816413.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229603166|ref|YP_002865319.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
gi|254683075|ref|ZP_05146936.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725862|ref|ZP_05187644.1| peptidase, M23/M37 family protein [Bacillus anthracis str. A1055]
gi|254735033|ref|ZP_05192744.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254753202|ref|ZP_05205238.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Vollum]
gi|254757116|ref|ZP_05209144.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
Australia 94]
gi|30254321|gb|AAP24735.1| peptidase, M23/M37 family [Bacillus anthracis str. Ames]
gi|47501156|gb|AAT29832.1| peptidase, M23/M37 family [Bacillus anthracis str. 'Ames Ancestor']
gi|49177641|gb|AAT53017.1| peptidase, M23/M37 family [Bacillus anthracis str. Sterne]
gi|164711790|gb|EDR17333.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167510731|gb|EDR86125.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|167528612|gb|EDR91372.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|170126462|gb|EDS95349.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|172080562|gb|EDT65647.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190560077|gb|EDV14059.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227004515|gb|ACP14258.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229267574|gb|ACQ49211.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 48 VALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|65318150|ref|ZP_00391109.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 377
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNDS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 48 VALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|308177120|ref|YP_003916526.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307744583|emb|CBT75555.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 270
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 5/152 (3%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFV---TIKASRANSR-IGPGIMYTVVCTYLTKGLPVE 89
Y AP+ A + P + V K + AN R + + + G V
Sbjct: 24 AYAAPVAASQVPSALPATGPAIKSVKSSVAKRTTANLRLRAKSTLQSSTLRVIPNGAKVA 83
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V+ +W ++R + G GW + S L SA +P +NL +
Sbjct: 84 VLDTKGSWDKVR-YSGMTGWSHNSYLHALASASKTPSQTARYTTANLNLRAGAGTNHRSL 142
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ G +T+ SG W + GW+ +
Sbjct: 143 GVIPQGGKVTLHRVSGNWAQVTSSKGSGWVSR 174
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 14/152 (9%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
H K P + + N R G G + + + +G V + + NW Q+
Sbjct: 109 HALASASKTP-SQTARYTTANLNLRAGAGTNHRSLGV-IPQGGKVTLHRVSGNWAQVTSS 166
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNP----------IYINLYKKPDIQSIIVAKVE 153
G+ GW+++ LS + K + P ++NL + +
Sbjct: 167 KGS-GWVSRLYLSSNAQPSIPKKQEKPSAPKQSQKYAYASAFLNLRAGAGTSHRSIGVIS 225
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
G + + S W + G IW
Sbjct: 226 KGEKVAVLATSRGWSKVRSSKGTG-GPAALIW 256
>gi|301052369|ref|YP_003790580.1| NLP/P60 family peptidase [Bacillus anthracis CI]
gi|300374538|gb|ADK03442.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus biovar anthracis str.
CI]
Length = 386
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGRFVTIQEEQGEWYKI-LHNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGRFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|301052438|ref|YP_003790649.1| putative enterotoxin/cell wall-binding protein [Bacillus anthracis
CI]
gi|300374607|gb|ADK03511.1| possible enterotoxin/cell wall-binding protein [Bacillus cereus
biovar anthracis str. CI]
Length = 434
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229154492|ref|ZP_04282609.1| 3D domain protein [Bacillus cereus ATCC 4342]
gi|228628890|gb|EEK85600.1| 3D domain protein [Bacillus cereus ATCC 4342]
Length = 416
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228983987|ref|ZP_04144177.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228775807|gb|EEM24183.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 440
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229189003|ref|ZP_04316031.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228594423|gb|EEK52214.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 440
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|269839878|ref|YP_003324571.1| polysaccharide deacetylase [Thermobaculum terrenum ATCC BAA-798]
gi|269791608|gb|ACZ43748.1| polysaccharide deacetylase [Thermobaculum terrenum ATCC BAA-798]
Length = 382
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 9/168 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
LA + + + + + R+ + A+ N R GP Y V+
Sbjct: 10 RAHRGRWLLLATMWMVLMLALPASGQAAIST---GRYASTTAA-LNLRSGPSTSYPVLQL 65
Query: 81 YLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIV-SPWNRKTNNPIYINL 138
P + Y W ++R + G IG+++ + L+ + +
Sbjct: 66 IPCGMEPYVLSGPYNTYWYKVR-YTGLIGYVHGNYLAQGSAVSTHLCEGANAVAAFTARV 124
Query: 139 YKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
P + V G + + SG W G+ +
Sbjct: 125 RTGPSTGYPVRISVPQGKQVRVISGPYSGGWYRVSYQGVTGYAYGGLL 172
>gi|153953418|ref|YP_001394183.1| hypothetical protein CKL_0782 [Clostridium kluyveri DSM 555]
gi|219854043|ref|YP_002471165.1| hypothetical protein CKR_0700 [Clostridium kluyveri NBRC 12016]
gi|146346299|gb|EDK32835.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567767|dbj|BAH05751.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 442
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 60/149 (40%), Gaps = 26/149 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R G G ++++ YL KG V++V +W +I+ + + G+++ + +S
Sbjct: 207 ISNSSSVLNIRNGAGTSFSILG-YLKKGETVQIVGTIGDWYKIKL-NSSYGYVSSNYISS 264
Query: 118 ----KRSAIVSPWN------------------RKTNNPIYINLYKKPDIQSIIVAKVEPG 155
SA+ + + + +NL P I++ + G
Sbjct: 265 GASSTNSAVQQLSSNSPSQNSGSSTSTGSGYVKLSATSSTLNLRSTPQGN--IISSLPNG 322
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I E +G W T G++ I
Sbjct: 323 TAVNILESNGSWYKVSVNGTTGYVYSSYI 351
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 26/148 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R P + + L G V +++ +W ++ +GT G++ S +S
Sbjct: 298 LSATSSTLNLRSTPQGN---IISSLPNGTAVNILESNGSWYKVS-VNGTTGYVYSSYIST 353
Query: 118 KRSAIV---------------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++A + +N+ +NL P I+ + G
Sbjct: 354 SQAAASSNVAATNTSTSQSSTSSQTGKTGTVTLSNSSSVLNLRNNPWTG-RILTTLPNGT 412
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI G W T G++ I
Sbjct: 413 SVTILSTEGRWYKIQWGSTIGYVHSDYI 440
>gi|34558444|ref|NP_908259.1| hypothetical protein WS2167 [Wolinella succinogenes DSM 1740]
gi|34484163|emb|CAE11159.1| hypothetical protein WS2167 [Wolinella succinogenes]
Length = 233
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
LAP L+ + K L ++ N R P + +G VE +
Sbjct: 83 PLAPNLSEERDSSASSTKTLLY--SVNTEVLNIRENPSTTAPIT-AKKERGEVVEASEVR 139
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI----------NLYKKPDI 144
+W +I+ GW LL+ + A +P + + + + N+ + P
Sbjct: 140 GDWVKIK-----EGWAYLKLLTPLK-ATPAPRPKASTPDVKVIRYSVNTEVLNIRENPST 193
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I AK E G ++ E G+W EGW + +
Sbjct: 194 TAPITAKKERGEVVEASEVRGDWVKIK----EGWAYLKLL 229
>gi|229114386|ref|ZP_04243804.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228669065|gb|EEL24489.1| 3D domain protein [Bacillus cereus Rock1-3]
Length = 446
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANTKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T E +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228944538|ref|ZP_04106908.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228814998|gb|EEM61249.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 432
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229089851|ref|ZP_04221106.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|228693476|gb|EEL47182.1| 3D domain protein [Bacillus cereus Rock3-42]
Length = 378
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229195049|ref|ZP_04321824.1| Peptidase, M23/M37 [Bacillus cereus m1293]
gi|228588278|gb|EEK46321.1| Peptidase, M23/M37 [Bacillus cereus m1293]
Length = 386
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPDLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSG 117
+K + + + + V +++ +W ++ D +G++ K LL
Sbjct: 43 VKVDQVALHTKDNTNSSAI-DTIRFNTKVNILETTNDWYKVS-VDNKVGYVQKDSILLKN 100
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K + N+ N +N+ +PD++S I+ + G +TI+E GEW + G
Sbjct: 101 K----LQSNNQYIVNANALNVRSEPDLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTG 156
Query: 178 WIKKQKI 184
+++K +
Sbjct: 157 YVQKAFV 163
>gi|326390867|ref|ZP_08212419.1| copper amine oxidase-like domain-containing protein
[Thermoanaerobacter ethanolicus JW 200]
gi|325993126|gb|EGD51566.1| copper amine oxidase-like domain-containing protein
[Thermoanaerobacter ethanolicus JW 200]
Length = 656
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
LP + + A N R GPG Y ++ T + G + V+ + +W +++ +G +GWI
Sbjct: 303 LPSSLMVNADVVNIRTGPGTQYDII-TQVNNGDILSVIDKSGDWYKVKLQNGVVGWIAGW 361
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
L + + N L S
Sbjct: 362 LTIAYNNPNQITSDTSDNLSDRRTLTAGGSQSSR 395
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
I + + N +N+ P Q I+ +V G +L++ + SG+W GWI
Sbjct: 299 IITTLPSSLMVNADVVNIRTGPGTQYDIITQVNNGDILSVIDKSGDWYKVKLQNGVVGWI 358
Query: 180 K 180
Sbjct: 359 A 359
>gi|297545546|ref|YP_003677848.1| copper amine oxidase domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843321|gb|ADH61837.1| copper amine oxidase domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 656
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
LP + + A N R GPG Y ++ T + G + V+ + +W +++ +G +GWI
Sbjct: 303 LPSSLMVNADVVNIRTGPGTQYDII-TQVNNGDILSVIDKSGDWYKVKLQNGVVGWIAGW 361
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
L + + N L S
Sbjct: 362 LTIAYNNPNQITSDTSDNLSDRRTLTAGGSQSSR 395
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
I + + N +N+ P Q I+ +V G +L++ + SG+W GWI
Sbjct: 299 IITTLPSSLMVNADVVNIRTGPGTQYDIITQVNNGDILSVIDKSGDWYKVKLQNGVVGWI 358
Query: 180 K 180
Sbjct: 359 A 359
>gi|118476458|ref|YP_893609.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis str.
Al Hakam]
gi|118415683|gb|ABK84102.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 438
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|257125652|ref|YP_003163766.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049591|gb|ACV38775.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 153
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLL 115
+ + N R P VV T + V+ + NW ++ G +G+I+ S+L
Sbjct: 27 SSSSGIINVREFPNNQSRVVTT-ARNNQIIRVIHKQGNWYKVNIEAGDIGYLGYIHNSML 85
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NL 173
+ + Y N+ KP S ++A++E G + +G+W + +
Sbjct: 86 KKVTEFSI------YSKEGYTNVRSKPSSSSKVIARLENGEEVFAINKTGDWYYVTLWDS 139
Query: 174 DTEGWIKKQKI 184
D G++ + ++
Sbjct: 140 DIYGYVHQSQL 150
>gi|228932214|ref|ZP_04095100.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827510|gb|EEM73258.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 444
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|309792796|ref|ZP_07687239.1| NLP/P60 protein [Oscillochloris trichoides DG6]
gi|308225160|gb|EFO78945.1| NLP/P60 protein [Oscillochloris trichoides DG6]
Length = 536
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 17/145 (11%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINK 112
+P ++ R GPG+ Y + +T G VEV+ +E W Q+R D TI W+
Sbjct: 147 VPAMIS--GDVVRMRNGPGLAYDEI-NRITGGSNVEVIGRHEEWLQVRQADDATIYWVAA 203
Query: 113 SLLSGKRSAIVS-------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
L+ + I + P +NL P + +A++ G LT
Sbjct: 204 ELVDIPEAVIYTLNVVPSEQIPPPPPPKIGVVIEEGLNLRDGPGTNYVSMARMSAGQELT 263
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
+ + W GW+ + +
Sbjct: 264 LVQQYQGWFLVEYGTQYGWVTRDFL 288
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 14/131 (10%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--- 122
N R GPG Y V ++ G + +V++Y+ W + + GW+ + L+ +
Sbjct: 241 NLRDGPGTNY-VSMARMSAGQELTLVQQYQGWFLVE-YGTQYGWVTRDFLTIVDGVVERV 298
Query: 123 --------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+P T +N+ K P VA + G +T+ +W +
Sbjct: 299 PVAQTIPDPNPPLVGTVLENAVNMRKGPGSAYDRVASINAGAQVTLLGKYKDWFKVELSD 358
Query: 174 DTEGWIKKQKI 184
T+ WI +
Sbjct: 359 GTKAWIFSDLM 369
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R GPG Y V + G V ++ +Y++W ++ DGT WI L+ A+
Sbjct: 318 NAVNMRKGPGSAYDRV-ASINAGAQVTLLGKYKDWFKVELSDGTKAWIFSDLMKISPMAV 376
>gi|228983926|ref|ZP_04144116.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229154426|ref|ZP_04282543.1| Peptidase, M23/M37 [Bacillus cereus ATCC 4342]
gi|228628824|gb|EEK85534.1| Peptidase, M23/M37 [Bacillus cereus ATCC 4342]
gi|228775746|gb|EEM24122.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 386
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLEASIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSG 117
+K + + + + V +++ +W ++ + +G++ K LL
Sbjct: 43 VKVDQVALHTKDNTNSSSI-DTIRFNTKVNILETTNDWYKVS-VNNKVGYVQKDSILLKN 100
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K + N+ N +N+ +P++++ I+ + G +TI+E GEW + G
Sbjct: 101 K----LQSNNQYIVNANALNVRSEPNLEASILDVLPNGKFVTIQEEQGEWYKILHNGKTG 156
Query: 178 WIKKQKI 184
+++K +
Sbjct: 157 YVQKAFV 163
>gi|229183127|ref|ZP_04310357.1| 3D domain protein [Bacillus cereus BGSC 6E1]
gi|228600266|gb|EEK57856.1| 3D domain protein [Bacillus cereus BGSC 6E1]
Length = 432
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|169826624|ref|YP_001696782.1| Beta-N-acetylglucosaminidase [Lysinibacillus sphaericus C3-41]
gi|168991112|gb|ACA38652.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus sphaericus
C3-41]
Length = 616
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 15/127 (11%)
Query: 66 NSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + T L K +V+ E W ++ +G GW+ +
Sbjct: 494 NMRTYPNTTDAASIMTNLPKDTSFKVLGENGGWFKVS-VNGQEGWVFDD------YVQLE 546
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIR-----ECSGEWCFGYNLDTEG 177
+ N I +N+ +P + I+ V+P ++ + + +G W G
Sbjct: 547 NGLQIVNMNIMLNVRSEPSTTAPILGTVKPNGFIIGAVDDKGEFKKNGAWYQVIYNGKTG 606
Query: 178 WIKKQKI 184
W+ I
Sbjct: 607 WVHGDYI 613
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN------WRQIRDFDGTIGWINKSLLSGK 118
N R P ++ T G + V + W Q+ ++G GW++ + K
Sbjct: 559 NVRSEPSTTAPILGTVKPNGFIIGAVDDKGEFKKNGAWYQVI-YNGKTGWVHGDYIVKK 616
>gi|229137604|ref|ZP_04266210.1| 3D domain protein [Bacillus cereus BDRD-ST26]
gi|228645830|gb|EEL02058.1| 3D domain protein [Bacillus cereus BDRD-ST26]
Length = 450
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + F
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAET---------F 51
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT N R P VV L G V V+ W +++ G +I+
Sbjct: 52 VT--TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229108398|ref|ZP_04238015.1| 3D domain protein [Bacillus cereus Rock1-15]
gi|228675025|gb|EEL30252.1| 3D domain protein [Bacillus cereus Rock1-15]
Length = 440
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229126225|ref|ZP_04255243.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|228657217|gb|EEL13037.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 443
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228906546|ref|ZP_04070422.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228853095|gb|EEM97873.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 452
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 26/190 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWG 186
++ + G
Sbjct: 159 AYVHVPYLTG 168
>gi|326790753|ref|YP_004308574.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541517|gb|ADZ83376.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 344
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 22/168 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ K++ ++L+ AI + P LA + L N R G + ++
Sbjct: 3 LKKVVLSTLVGVAAI---MVPSLAYGQAYGTVATQTL-----------NVRDGAKLEASI 48
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + G PVE+V E +W ++ D + ++ ++ R V N +N
Sbjct: 49 V-KQVGLGEPVEIVCEEGDWLKLILEDDSRAYVKAEYINVHRVLAVVNVNGG------LN 101
Query: 138 LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ G +++ G+W EG++ K +
Sbjct: 102 VRDYPSTENGKVIGSFSNGDEISVSYSVGDWYKVSQEGFEGYVSKDYV 149
>gi|196040224|ref|ZP_03107526.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus NVH0597-99]
gi|196029079|gb|EDX67684.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus NVH0597-99]
Length = 1434
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
T+ A+ N R P V+ T + KG V+V+ + + W +I DG G++ L
Sbjct: 33 ATVNATNLNIREQPTTQGKVIGT-VKKGTNVQVLSKEKEWAKIS-HDGKEGYVTLQFLGF 90
Query: 116 -SGKRSAIVSPW--------NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+G + +N+ P + S ++ V+ +T+ +
Sbjct: 91 SNGNPNVEQKQQLTINNGQKEEGIVTATRLNVRNSPALGSSMIGYVQKNEKVTVLGKANG 150
Query: 167 WCFGYNLDTEGWI 179
W EG++
Sbjct: 151 WAKISYQGKEGYV 163
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI A+ R +++ L G V V+ + W +I ++ G G+++ ++
Sbjct: 901 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKI-NYQGKEGYVSLEFITIG 958
Query: 119 RSAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ +I R N +N+ K P + V ++ G +TI W
Sbjct: 959 KDSIDPTNPTNPGQVIEERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAK 1018
Query: 170 GYNLDTEGWI 179
EG++
Sbjct: 1019 IRFNGGEGYV 1028
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 18/136 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SG 117
+ A+R N R P + +++ Y+ K V V+ + W +I + G G+++ + G
Sbjct: 115 VTATRLNVRNSPALGSSMIG-YVQKNEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKIDG 172
Query: 118 KRSAIVSPWNRKTNNPIY--------------INLYKKPDIQSIIVAKVEPGVLLTIREC 163
I P KT++ + + + S I+ ++ G +T+
Sbjct: 173 NTEEIKKPEQPKTSDATIKNGTQEVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGK 232
Query: 164 SGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 233 ANGWAKISYQGKEGYV 248
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R T++ T L G V V+ + W +I + G G++
Sbjct: 277 TINATSLRVRSAANTSSTILGT-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 334
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 335 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 387
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 388 KANGWAKISYQGKEGYV 404
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ L G V V+ + W +I + G G++
Sbjct: 355 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 412
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 413 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 465
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 466 KANGWAKISYQGKEGYV 482
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ L G V V+ + W +I + G G++
Sbjct: 433 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 490
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 491 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 543
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 544 KANGWAKISYQGKEGYV 560
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ L G V V+ + W +I + G G++
Sbjct: 511 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 568
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 569 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 621
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 622 KANGWAKISYQGKEGYV 638
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ L G V V+ + W +I + G G++
Sbjct: 589 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 646
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 647 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 699
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 700 KANGWAKISYQGKEGYV 716
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 11/130 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
TI A+ R +++ L G V V+ + W +I + G G+++ +
Sbjct: 745 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 802
Query: 117 -------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ T N + + + S I+ ++ G +T+ + W
Sbjct: 803 AGKQEEKPAENITNGTQEVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAK 862
Query: 170 GYNLDTEGWI 179
EG++
Sbjct: 863 ISYQGKEGYV 872
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN---KSLL 115
TI A+ R +++ L G V V+ + W +I + G G+++ L
Sbjct: 199 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 256
Query: 116 SGKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+GK+ + T N + + + S I+ ++ G +T+ + W
Sbjct: 257 AGKQEEKPVENITNGTQEVGTINATSLRVRSAANTSSTILGTLKNGEKVTVLGKANGWAK 316
Query: 170 GYNLDTEGWI 179
EG++
Sbjct: 317 ISYQGKEGYV 326
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 25/137 (18%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ L G V V+ + W +I + G G++
Sbjct: 823 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 880
Query: 111 --------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+++ +G R T N + + + S I+ ++ G +T+
Sbjct: 881 AGKQEEKPAENITNGTREV-------GTINATSLRVRSAANTSSSILGNLKNGEKVTVLG 933
Query: 163 CSGEWCFGYNLDTEGWI 179
+ W EG++
Sbjct: 934 KANGWAKINYQGKEGYV 950
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-- 116
TI A+ R +++ L G V V+ + W +I + G G+++ +
Sbjct: 667 TINATSLRVRSAANTSSSILGN-LKNGEKVTVLGKANGWAKIS-YQGKEGYVSLEFVKLE 724
Query: 117 -------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
T N + + + S I+ ++ G +T+ + W
Sbjct: 725 AGKQEEKPAEDITNGTQEVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAK 784
Query: 170 GYNLDTEGWI 179
EG++
Sbjct: 785 ISYQGKEGYV 794
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+++ F ++ + + + AS N R GP V +L G V
Sbjct: 950 VSLEFITIGKDSIDPTNPTNPGQVIEERAVVNASLLNVRKGPSTGAAAVG-HLKNGETVT 1008
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLS---GKRSAIVSPWNRKTNNPIYIN 137
++ + W +IR F+G G+++ L G S + ++K P
Sbjct: 1009 IIGKENGWAKIR-FNGGEGYVSLQFLKVKQGSSSYEIVTSSQKVQKPNEAE 1058
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 25/62 (40%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
A N T N +N+ ++P Q ++ V+ G + + EW + EG
Sbjct: 22 STHAFAESDNLATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISHDGKEG 81
Query: 178 WI 179
++
Sbjct: 82 YV 83
>gi|228919642|ref|ZP_04083004.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839996|gb|EEM85275.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 446
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228957213|ref|ZP_04118979.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802404|gb|EEM49255.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 452
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|228970934|ref|ZP_04131571.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228788743|gb|EEM36685.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
Length = 445
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRASANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229149132|ref|ZP_04277373.1| 3D domain protein [Bacillus cereus m1550]
gi|228634331|gb|EEK90919.1| 3D domain protein [Bacillus cereus m1550]
Length = 440
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|256003918|ref|ZP_05428904.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|255992046|gb|EEU02142.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|316940651|gb|ADU74685.1| NLP/P60 protein [Clostridium thermocellum DSM 1313]
Length = 370
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KAS N R GPG Y+++ L+ G V ++KE W QI+ +G+ GW++ + ++
Sbjct: 161 VKASALNVRQGPGTSYSII-NQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGTYVNVNT 219
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ + + P N D++ +V +
Sbjct: 220 TIASRGGLSENSAPAASNNSDVSDVRQQVVEYAKK 254
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 109 WINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+I S LS ++ +N+ + P + I+ ++ G + I E S
Sbjct: 10 YITASALSVSLWTCTSFAQQNKTGVTTASMLNMRENPSTSTKIIDQIPNGTKVDIIETSN 69
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W GW+ +
Sbjct: 70 GWYKISYNGKTGWVYGSYV 88
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
AS N R P ++ + G V++++ W +I ++G GW+ S + +
Sbjct: 36 TASMLNMRENPSTSTKII-DQIPNGTKVDIIETSNGWYKIS-YNGKTGWVYGSYVKVTET 93
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ +N+ + P I+ ++ G + I + W + GW+
Sbjct: 154 TVVKTGIVKASALNVRQGPGTSYSIINQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGT 213
Query: 183 KI 184
+
Sbjct: 214 YV 215
>gi|228925970|ref|ZP_04089051.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833682|gb|EEM79238.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 422
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229120431|ref|ZP_04249678.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228663016|gb|EEL18609.1| 3D domain protein [Bacillus cereus 95/8201]
Length = 434
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229195133|ref|ZP_04321908.1| 3D domain protein [Bacillus cereus m1293]
gi|228588362|gb|EEK46405.1| 3D domain protein [Bacillus cereus m1293]
Length = 446
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229028525|ref|ZP_04184642.1| Peptidase, M23/M37 [Bacillus cereus AH1271]
gi|228732743|gb|EEL83608.1| Peptidase, M23/M37 [Bacillus cereus AH1271]
Length = 386
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGRTGYVQKAFVSNGS 167
Query: 120 SAIVSPWNRKTNNPIYI-----NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++V + N + N+ S ++ ++ G + + E G W
Sbjct: 168 QSLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQIQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDAILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGRTGYVQKAFV 163
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDAI 96
>gi|229042664|ref|ZP_04190404.1| 3D domain protein [Bacillus cereus AH676]
gi|228726604|gb|EEL77821.1| 3D domain protein [Bacillus cereus AH676]
Length = 443
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229010224|ref|ZP_04167434.1| 3D domain protein [Bacillus mycoides DSM 2048]
gi|228751074|gb|EEM00890.1| 3D domain protein [Bacillus mycoides DSM 2048]
Length = 453
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESQV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + +W ++ + G P
Sbjct: 111 VRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTGKAP 163
>gi|206977267|ref|ZP_03238165.1| peptidase, M23/M37 family [Bacillus cereus H3081.97]
gi|222094477|ref|YP_002528537.1| peptidase, nlp/p60 family sh3 domain protein and m23/m37 family
peptidase fusion [Bacillus cereus Q1]
gi|206744583|gb|EDZ55992.1| peptidase, M23/M37 family [Bacillus cereus H3081.97]
gi|221238535|gb|ACM11245.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus Q1]
Length = 386
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|229101485|ref|ZP_04232223.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
gi|228681935|gb|EEL36074.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
Length = 386
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQGEQGEWYKIS-HNGQTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNDTKYTVATPKLNVRSNASTNGTLLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K + T + + V ++K ++W ++ + +G++ K + K
Sbjct: 43 VKVDQVALHKEDNTNSTSL-DTIRFNTKVNILKTTKDWYKVS-VNNKVGYVQKDAILQKN 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N+ N +N+ +P+++S I+ + G +TI+ GEW + G++
Sbjct: 101 KLQST--NQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQGEQGEWYKISHNGQTGYV 158
Query: 180 KKQKI 184
+K +
Sbjct: 159 QKAFV 163
>gi|229159873|ref|ZP_04287880.1| 3D domain protein [Bacillus cereus R309803]
gi|228623612|gb|EEK80431.1| 3D domain protein [Bacillus cereus R309803]
Length = 434
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K+ + V+ T + W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|152974436|ref|YP_001373953.1| peptidase M23B [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152023188|gb|ABS20958.1| peptidase M23B [Bacillus cytotoxicus NVH 391-98]
Length = 383
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
A+ N R P +++ L G V V + NW +I +G IG++ K +S
Sbjct: 112 ANALNVRSEPNTESSIL-DVLPNGKFVAVQETQGNWYKI-FHNGQIGYVQKDFVSSGSKP 169
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ V T +N+ S I+ ++ G + + E G W
Sbjct: 170 LVKGITVQNTPTYTVATPKLNVRSNAGTNSAIIGSLQNGTQVQVVETVGTWYKIRFGTAY 229
Query: 177 GWIKKQKI 184
G++ K I
Sbjct: 230 GYVAKHYI 237
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K + N + + + + PV +++ +W ++ + IG+I K ++ +
Sbjct: 43 VKVDKVNLYPTTSVNNDSIGS-IPYNTPVTILETVHDWYKV-NIHNQIGYIKKDAITFTK 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S+ + + +N+ +P+ +S I+ + G + ++E G W ++ G++
Sbjct: 101 SS--KRSEQYIVHANALNVRSEPNTESSILDVLPNGKFVAVQETQGNWYKIFHNGQIGYV 158
Query: 180 KKQKI 184
+K +
Sbjct: 159 QKDFV 163
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ P + T+ + N R G ++ + L G V+VV+ W +IR
Sbjct: 174 ITVQNTPTY-TVATPKLNVRSNAGTNSAIIGS-LQNGTQVQVVETVGTWYKIR 224
>gi|297543865|ref|YP_003676167.1| 5'-nucleotidase domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296841640|gb|ADH60156.1| 5'-Nucleotidase domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 1222
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G ++ L G V ++++ W +I D++G G++ ++
Sbjct: 1097 VTASALNVRAGANTSSKIIGV-LPAGKVVTLLEKVNGWYKI-DYNGKTGYLYGKYVAATP 1154
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ I + + V G L + W G
Sbjct: 1155 NPSNVTVLKAVKVTAKSGLNVRVGNSITAKKIGAVPYGTELKVVGEYNGWYQIEYNGGFG 1214
Query: 178 WIKKQ 182
++ +
Sbjct: 1215 YVYAK 1219
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 21/58 (36%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ + S I+ + G ++T+ E W G++ + +
Sbjct: 1093 NYGIVTASALNVRAGANTSSKIIGVLPAGKVVTLLEKVNGWYKIDYNGKTGYLYGKYV 1150
>gi|291615066|ref|YP_003525223.1| hypothetical protein Slit_2611 [Sideroxydans lithotrophicus ES-1]
gi|291585178|gb|ADE12836.1| protein of unknown function DUF1058 [Sideroxydans lithotrophicus
ES-1]
Length = 144
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 29/169 (17%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L +L+ A LA E I ++KA +
Sbjct: 2 KRLATALMLLGASQSSLAFDFVSVAEPAILYDAN-----SLKAKKLFV------------ 44
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T+ LP+E V + NW ++RD G + WI K LS KR +V+ +
Sbjct: 45 --ATRYLPLEEVVDLANWVKVRDSSGKLYWIEKRNLSNKRYVMVTVP--------LAVVR 94
Query: 140 KKPDIQSIIVAKVEPGV-LLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
P S +V K + L + W + + G++K +WG
Sbjct: 95 SDPTENSQVVFKAAQQLGLEWLANTGTGWIKVRHADGSVGYLKSTDVWG 143
>gi|328906687|gb|EGG26460.1| lipoprotein A-like protein [Propionibacterium sp. P08]
Length = 488
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 55/179 (30%), Gaps = 26/179 (14%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLP---RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
P ++ + P T S N R P V+ L G V
Sbjct: 176 TTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVI-NQLANGTGV 234
Query: 89 EVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY------------ 135
E + NW QIR DG GW ++ L+GK A+ K P
Sbjct: 235 HATGEVHGNWVQIR-ADGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSA 293
Query: 136 -------INLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+N++ P + I+ + G + E G W GW + + G
Sbjct: 294 PIHTTTGVNVHTAPSPNARIITALTQGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTG 352
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 26/164 (15%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F + LP +T N R G + T +G V V W + +G
Sbjct: 106 FGSEALPGTMTAAVP-VNVR-GDAANAGKILTVAERGQQVRVTGRPDRGWVPV-AVNGKS 162
Query: 108 GWINKSLLS--GKRSAIVSPW-------------------NRKTNNPIYINLYKKPDIQS 146
GWI L+ +A P + T +N+ P S
Sbjct: 163 GWIYGRYLTTGKVTTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSS 222
Query: 147 IIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
++ ++ G + E G W GW + + G P
Sbjct: 223 QVINQLANGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTGKLP 266
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK- 118
+ N P ++ T LT+G V E + NW QIR DG GW ++ L+GK
Sbjct: 297 TTTGVNVHTAPSPNARII-TALTQGTGVHATGEVHGNWVQIR-ADGHTGWAYRTYLTGKV 354
Query: 119 -RSAIVSPWNRKTNNPIYINLYKKP 142
+ + +P K +P
Sbjct: 355 PATKVDTPSRNKHKGSDTSRDQARP 379
>gi|167038553|ref|YP_001666131.1| alpha amylase catalytic subunit [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116949|ref|YP_004187108.1| alpha amylase catalytic subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857387|gb|ABY95795.1| alpha amylase, catalytic region [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930040|gb|ADV80725.1| alpha amylase catalytic region [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 1674
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G I ++ T + G V+ ++E W ++ D++G +G+++ +S
Sbjct: 1482 VTASTLNLREGASITSKIIGT-IPAGKVVKWLEEVNGWYKV-DYNGKVGYVSTKYVSSVP 1539
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + K +N+ + + + V G L + E W D G
Sbjct: 1540 DPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVPYGTELKVVEERNGWYLVQYKDGFG 1599
Query: 178 WIK 180
+I
Sbjct: 1600 YIY 1602
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 49 FEKKPLPRFVTIKAS-------RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
P P VT+ S N R+ + + + G ++VV+E W ++
Sbjct: 1535 VSSVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGA-VPYGTELKVVEERNGWYLVQ 1593
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
DG G+I +++++ K +N+ +++ + V G L +
Sbjct: 1594 YKDG-FGYIYSVYTVDTKASVL--KTVKVTAKSGLNVRAGDSVKARKIGAVPYGTQLKVV 1650
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W + G++ +
Sbjct: 1651 GEYGAWYLIQYKNGFGYVYAK 1671
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL + I S I+ + G ++ E W G++ + +
Sbjct: 1478 NYGIVTASTLNLREGASITSKIIGTIPAGKVVKWLEEVNGWYKVDYNGKVGYVSTKYV 1535
>gi|218901919|ref|YP_002449753.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228925911|ref|ZP_04088992.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|218535761|gb|ACK88159.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228833623|gb|EEM79179.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 386
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKIS-HNGKAGYVQKAFVSHGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|256752673|ref|ZP_05493524.1| alpha amylase catalytic region [Thermoanaerobacter ethanolicus CCSD1]
gi|256748435|gb|EEU61488.1| alpha amylase catalytic region [Thermoanaerobacter ethanolicus CCSD1]
Length = 1674
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G I ++ T + G V+ ++E W ++ D++G +G+++ +S
Sbjct: 1482 VTASTLNLREGASITSKIIGT-IPAGKVVKWLEEVNGWYKV-DYNGKVGYVSTKYVSSVP 1539
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + K +N+ + + + V G L + E W D G
Sbjct: 1540 DPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVPYGTELKVVEERNGWYLVQYRDGFG 1599
Query: 178 WIK 180
+I
Sbjct: 1600 YIY 1602
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 49 FEKKPLPRFVTIKAS-------RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
P P VT+ S N R+ + + + G ++VV+E W ++
Sbjct: 1535 VSSVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGA-VPYGTELKVVEERNGWYLVQ 1593
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
DG G+I +++++ K +N+ +++ + V G L +
Sbjct: 1594 YRDG-FGYIYSVYTVDTKASVL--KTVKVTAKSGLNVRAGDSVKARKIGAVPYGTQLKVV 1650
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W + G++ +
Sbjct: 1651 GEYGAWYLIQYKNGFGYVYAK 1671
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL + I S I+ + G ++ E W G++ + +
Sbjct: 1478 NYGIVTASTLNLREGASITSKIIGTIPAGKVVKWLEEVNGWYKVDYNGKVGYVSTKYV 1535
>gi|218895841|ref|YP_002444252.1| enterotoxin [Bacillus cereus G9842]
gi|218545566|gb|ACK97960.1| enterotoxin [Bacillus cereus G9842]
Length = 469
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+N+ + S I+ K++ ++ +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|75760548|ref|ZP_00740583.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74491976|gb|EAO55157.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 468
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+N+ + S I+ K++ ++ +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|229165738|ref|ZP_04293506.1| 3D domain protein [Bacillus cereus AH621]
gi|228617739|gb|EEK74796.1| 3D domain protein [Bacillus cereus AH621]
Length = 445
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESQV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + +W ++ + G P
Sbjct: 111 VRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTGKAP 163
>gi|206968531|ref|ZP_03229487.1| 3D domain protein [Bacillus cereus AH1134]
gi|206737451|gb|EDZ54598.1| 3D domain protein [Bacillus cereus AH1134]
Length = 456
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+N+ + S I+ K++ ++ +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|251796870|ref|YP_003011601.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
gi|247544496|gb|ACT01515.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
Length = 369
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 17/138 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R P ++V L G V V E W +I+ + GW+ L
Sbjct: 37 TDSLNVRSEPSRDSSIVG-GLKNGEIVTVSAEEYGWLRIK-SERVSGWVAGHYLKKVDGN 94
Query: 122 IVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+V+ R T + L + I+ + G +TI + W
Sbjct: 95 VVTASATDQDGSVRNSSAAARATVLVDRLRLRAGAGLNHEILGYLTKGEAVTIIDNREGW 154
Query: 168 CFGYNLDTE-GWIKKQKI 184
D + GW+ + I
Sbjct: 155 VRVQTRDKQLGWVSDRYI 172
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ R R G G+ + ++ YLTKG V ++ E W +++ D +GW++ ++
Sbjct: 116 ATVLVDRLRLRAGAGLNHEILG-YLTKGEAVTIIDNREGWVRVQTRDKQLGWVSDRYIAK 174
Query: 118 KRSAIVSPWNRKTNN 132
+ VS + K+ +
Sbjct: 175 GETQTVSVASGKSKS 189
>gi|110804003|ref|YP_699915.1| bacteriocin [Clostridium perfringens SM101]
gi|110684504|gb|ABG87873.1| bacteriocin [Clostridium perfringens SM101]
Length = 1067
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVK------EYENWRQIRDFDGTIGWINKSLL 115
S N R GPG Y + T L G V ++ E ++W +I G+ G+I +
Sbjct: 602 TSALNVRSGPGTTYRAIGT-LKLGNRVTILAKTKPAGETKDWYKISFNYGS-GYIRSDFV 659
Query: 116 SGKRSAI-VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S I + N ++N+ P ++ K+ G ++ I +G+W
Sbjct: 660 KLDSSEINYNAVGEIINVSSFLNVRSGPGTNFEMLGKLYKGDVVLIVSKNGDWYKIRYGT 719
Query: 175 TEGWIKKQKIW 185
T G+I K ++
Sbjct: 720 TFGYIHKDYVY 730
>gi|229177319|ref|ZP_04304703.1| 3D domain protein [Bacillus cereus 172560W]
gi|228606198|gb|EEK63635.1| 3D domain protein [Bacillus cereus 172560W]
Length = 462
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 70
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 71 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 125
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+N+ + S I+ K++ ++ +W
Sbjct: 126 TYYV----------TANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKT 175
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 176 AYVHVPYLTGKAP 188
>gi|110801773|ref|YP_698673.1| NLP/P60 family protein, enterotoxin [Clostridium perfringens SM101]
gi|110682274|gb|ABG85644.1| putative enterotoxin, EntB [Clostridium perfringens SM101]
Length = 549
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 19/140 (13%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 140 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NSNGLTGYIHGDYVQVGENS 197
Query: 116 -----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
SG +++ + N + + + P S +V + G I +
Sbjct: 198 SNNGGQSSGNNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQTFNINGKN 257
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G W T+G + +
Sbjct: 258 GAWYNIDAQGTKGHVHGDYV 277
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 25/149 (16%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + ++ +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPNTSSDVIG-YLTNGEIFNIDEKDGSWYKI-NGNGKVGYIH 102
Query: 112 KSL---LSGKR-------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
LSG +++V N + + + P S +V + G
Sbjct: 103 GDYVKELSGNSNSNNNSVSSSNLDTSLVGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGG 162
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ SG W + + G+I +
Sbjct: 163 QTFEIKGKSGSWYYINSNGLTGYIHGDYV 191
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G + + W I D GT G ++ +
Sbjct: 226 STSLRIRQSPSTSSSVVGS-LSAGQTFNINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 283
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 284 ESSNSGSNNNQSESQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 343
Query: 160 IRECS-GEWCFGYNLDTEGWIKKQKI 184
++ + W G++ + +
Sbjct: 344 LQGKTVSGWFKVNYNGKIGYLHEDYV 369
>gi|229056558|ref|ZP_04195965.1| 3D domain protein [Bacillus cereus AH603]
gi|228720771|gb|EEL72328.1| 3D domain protein [Bacillus cereus AH603]
Length = 445
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESQV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K+ + V+ T E +W ++ + G P
Sbjct: 111 VRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTAYVHVPYLTGKAP 163
>gi|229068469|ref|ZP_04201770.1| 3D domain protein [Bacillus cereus F65185]
gi|228714611|gb|EEL66485.1| 3D domain protein [Bacillus cereus F65185]
Length = 456
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLDLR---KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTE 176
+N+ + S I+ K++ V+ T + +W
Sbjct: 109 TYYV----------TANVLNVRASANTDSEILGKLKKDDVIETAHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|229101556|ref|ZP_04232279.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228681798|gb|EEL35952.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 432
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K+ + V+ T + +W ++ + G P
Sbjct: 111 VRAGANTDSEIIGKLKQDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAP 163
>gi|125973123|ref|YP_001037033.1| PgdS peptidase. cysteine peptidase. MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281417315|ref|ZP_06248335.1| NLP/P60 protein [Clostridium thermocellum JW20]
gi|125713348|gb|ABN51840.1| PgdS peptidase, Cysteine peptidase, MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281408717|gb|EFB38975.1| NLP/P60 protein [Clostridium thermocellum JW20]
Length = 370
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KAS N R GPG Y+++ L+ G V ++KE W QI+ +G+ GW++ + ++
Sbjct: 161 VKASALNVRQGPGTSYSII-NQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGTYVNVNT 219
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ + + P N ++ +V +
Sbjct: 220 TIASRGGLSENSAPAASNNSDVSGVRQQVVEYAKK 254
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 109 WINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+I S LS ++ +N+ + P + I+ ++ G + I E S
Sbjct: 10 YITASALSVSLWTCTSFAQQNKTGVTTASMLNMRENPSTSTKIIDQIPNGTKVDIIETSN 69
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W GW+ +
Sbjct: 70 GWYKISYNGKTGWVYGSYV 88
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
AS N R P ++ + G V++++ W +I ++G GW+ S + +
Sbjct: 36 TASMLNMRENPSTSTKII-DQIPNGTKVDIIETSNGWYKIS-YNGKTGWVYGSYVKVTET 93
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ +N+ + P I+ ++ G + I + W + GW+
Sbjct: 154 TVVKTGIVKASALNVRQGPGTSYSIINQLSNGAKVNIIKEESGWYQIKLANGSTGWVSGT 213
Query: 183 KI 184
+
Sbjct: 214 YV 215
>gi|229074436|ref|ZP_04207465.1| Peptidase, M23/M37 [Bacillus cereus Rock4-18]
gi|229114324|ref|ZP_04243742.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228669003|gb|EEL24427.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228708556|gb|EEL60700.1| Peptidase, M23/M37 [Bacillus cereus Rock4-18]
Length = 386
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQGEQGEWYKIS-HNGQTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNDTKYTVATPKLNVRSNASTNGTLLGSLQNGTQIQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K + T + + V ++K ++W ++ + +G++ K + K
Sbjct: 43 VKVDQVALHKEDNTNSTSL-DTIRFNTKVNILKTTKDWYKVS-VNNKVGYVQKDAILQKN 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N+ N +N+ +P+++S I+ + G +TI+ GEW + G++
Sbjct: 101 KLQST--NQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQGEQGEWYKISHNGQTGYV 158
Query: 180 KKQKI 184
+K +
Sbjct: 159 QKAFV 163
>gi|229016127|ref|ZP_04173080.1| 3D domain protein [Bacillus cereus AH1273]
gi|229022365|ref|ZP_04178904.1| 3D domain protein [Bacillus cereus AH1272]
gi|228738965|gb|EEL89422.1| 3D domain protein [Bacillus cereus AH1272]
gi|228745177|gb|EEL95226.1| 3D domain protein [Bacillus cereus AH1273]
Length = 432
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 1 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 50 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDSYYV----------TANVLN 98
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + +W ++ + G P
Sbjct: 99 VRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHVPYLTGKAP 151
>gi|20808951|ref|NP_624122.1| hypothetical protein TTE2606 [Thermoanaerobacter tengcongensis MB4]
gi|20517614|gb|AAM25726.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 723
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + R N R GP Y V+ T ++KG ++ + + +W +++ D GWI L+
Sbjct: 165 VVVNGDRVNVRTGPDTKYDVITT-VSKGEVLKALAKLGDWYKVQLKDNKAGWIAGWLVIP 223
Query: 118 KRSAIVSPWNRKTNN 132
K A S N
Sbjct: 224 KDQAQQSSQNHSKEE 238
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 36 LAPILALSHEKEIFEKKPL----PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ P + P P V+ S N R GPG Y ++ T + +G +E +
Sbjct: 354 IIPSVQNVQNPFPPADTPKLSLPPLMVS--GSVVNIRTGPGTQYDII-TQVNRGEILEAL 410
Query: 92 KEYENWRQIRDFDGTIGWINK 112
+ +W +R DGT+GWI+
Sbjct: 411 NKSGDWYNVRLKDGTVGWISA 431
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 116 SGKRSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ ++ +K N +N+ PD + ++ V G +L G+W
Sbjct: 147 GKTKTVYITSKEQKISMDVVVNGDRVNVRTGPDTKYDVITTVSKGEVLKALAKLGDWYKV 206
Query: 171 YNLDTE-GWIK 180
D + GWI
Sbjct: 207 QLKDNKAGWIA 217
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
+ +N+ P Q I+ +V G +L SG+W D GWI
Sbjct: 381 SGSVVNIRTGPGTQYDIITQVNRGEILEALNKSGDWYNVRLKDGTVGWI 429
>gi|154416285|ref|XP_001581165.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915390|gb|EAY20179.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 319
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 18/120 (15%)
Query: 62 ASRANSRIGPGIMY-TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A N R GPG Y + K P V +W Q+ F+G G+++ +S + S
Sbjct: 31 ADGVNVRSGPGTNYGRIGGLLRGKSAP--VTGSSGDWWQVS-FNGRTGYVHSDYVSVQGS 87
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWI 179
N+ I +N+ P V + G + I +G W +GW+
Sbjct: 88 V---------NSNIGVNIRSGPGTNYGRVGGLGNGAGVTIIGIRNGNWYKIS----QGWV 134
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 17/60 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P + + G + SG+W G++ +
Sbjct: 23 GGSATATPADGVNVRSGPGTNYGRIGGLLRGKSAPVTGSSGDWWQVSFNGRTGYVHSDYV 82
>gi|229068408|ref|ZP_04201709.1| Peptidase, M23/M37 [Bacillus cereus F65185]
gi|228714550|gb|EEL66424.1| Peptidase, M23/M37 [Bacillus cereus F65185]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANVLNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNEWYKVS-VHNKVGYVQKDAILLKNKLHS----NDQYIVNANVLNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|228919574|ref|ZP_04082936.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839928|gb|EEM85207.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|228951223|ref|ZP_04113335.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228963828|ref|ZP_04124964.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228795807|gb|EEM43279.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228808421|gb|EEM54928.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNEWYKVS-VHNKVGYVQKDAILLKNKLHS----NDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229078034|ref|ZP_04210642.1| Peptidase, M23/M37 [Bacillus cereus Rock4-2]
gi|228705273|gb|EEL57651.1| Peptidase, M23/M37 [Bacillus cereus Rock4-2]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNEWYKVS-VHNKVGYVQKDAILLKNKLHS----NDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229188931|ref|ZP_04315961.1| Peptidase, M23/M37 [Bacillus cereus ATCC 10876]
gi|228594534|gb|EEK52323.1| Peptidase, M23/M37 [Bacillus cereus ATCC 10876]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNEWYKVS-VHNKVGYVQKDAILLKNKLHS----NDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|206967626|ref|ZP_03228582.1| peptidase, M23/M37 family [Bacillus cereus AH1134]
gi|229177253|ref|ZP_04304637.1| Peptidase, M23/M37 [Bacillus cereus 172560W]
gi|206736546|gb|EDZ53693.1| peptidase, M23/M37 family [Bacillus cereus AH1134]
gi|228606132|gb|EEK63569.1| Peptidase, M23/M37 [Bacillus cereus 172560W]
Length = 384
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNEWYKVS-VHNKVGYVQKDTILLKNKLHS----NDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|123475097|ref|XP_001320728.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903539|gb|EAY08505.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 287
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R P +++ G + V +W QI D +G G+++ LL +
Sbjct: 40 ANIRSAPSTSASILGV-AGDGTQLTVTGHQNDWWQI-DRNGQTGFVHADLLHVR------ 91
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
K + I +N+ P V + G ++TI + S W +GW+
Sbjct: 92 ---GKVDADIGLNIRAGPGTNYGRVGGLGKGAIITIYDVSSNWYKVD----QGWV 139
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N+ P + I+ G LT+ +W G++ +
Sbjct: 35 AGGLGANIRSAPSTSASILGVAGDGTQLTVTGHQNDWWQIDRNGQTGFVHADLL 88
>gi|218895780|ref|YP_002444191.1| peptidase, M23/M37 family [Bacillus cereus G9842]
gi|228899411|ref|ZP_04063668.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 4222]
gi|218546030|gb|ACK98424.1| peptidase, M23/M37 family [Bacillus cereus G9842]
gi|228860168|gb|EEN04571.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 4222]
Length = 384
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E +G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQKGTQVQVVETAGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILEITNGWYKVS-VHNKVGYVQKDAILLKNK----LRSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|75762117|ref|ZP_00742020.1| Peptidoglycan-specific endopeptidase, M23 family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490398|gb|EAO53711.1| Peptidoglycan-specific endopeptidase, M23 family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 384
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E +G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQKGTQVQVVETAGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILEITNGWYKVS-VHNKVGYVQKDAILLKNK----LRSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|205374217|ref|ZP_03227016.1| cell-wall amidase lytH precursor [Bacillus coahuilensis m4-4]
Length = 556
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS----GKR 119
AN GP ++ T L + P+ ++ E+ +W + + D GW+ + LS
Sbjct: 167 SANLYSGPTEDSQLIKTLLPE-EPLSILHEWNDWLLVMN-DRYEGWMKRGTLSIISPEVP 224
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + + + + +++ P+ S + +V G ++ + S W GWI
Sbjct: 225 SFTHTMDQKVSISAPTLSVRSSPNFSSEKLGEVAYGEEFSLLDSSSSWYKIQYKGETGWI 284
Query: 180 K 180
Sbjct: 285 P 285
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ + R GPG+ Y V+ T L V ++++ +W +I+ D IGWI + + +
Sbjct: 33 EKLSIRSGPGLSYPVLATTLPPS--VMILEQEGDWLKIQL-DEQIGWIPSWQYAIESTV- 88
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGY 171
+N+ + P I++ IV + ++ + EW
Sbjct: 89 ---NTIGKVTGDRLNVRESPSIEAPIVGLLRRDEEVIIFSSSTEEWTKIQ 135
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+I A + R P + + G ++ +W +I+ + G GWI S
Sbjct: 234 VSISAPTLSVRSSPNFSSEKLGE-VAYGEEFSLLDSSSSWYKIQ-YKGETGWIPSWF-SF 290
Query: 118 KRSAIVSPWNRKTNN---PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL- 173
++P + ++ N+ ++P Q+ + + G T+ E SGEW
Sbjct: 291 VGYGSINPTDSFSSIFLLYDNTNIREEPSTQATTIKNGKAGEEYTVIEPSGEWYKIQLDE 350
Query: 174 DTEGWIK 180
D G++
Sbjct: 351 DQVGYVA 357
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ R N R P I +V + E W +I+ + ++ + L
Sbjct: 94 VTGDRLNVRESPSIEAPIVGLLRRDEEVIIFSSSTEEWTKIQSSSFSGYVSSQFVTALDS 153
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + N NLY P S ++ + P L+I +W N EG
Sbjct: 154 GSHLLKAAQ----VNQHSANLYSGPTEDSQLIKTLLPEEPLSILHEWNDWLLVMNDRYEG 209
Query: 178 WIKKQKI 184
W+K+ +
Sbjct: 210 WMKRGTL 216
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
IV +++ P + ++A P ++ I E G+W + GWI
Sbjct: 20 IIVLAKTNSLQQNEKLSIRSGPGLSYPVLATTLPPSVM-ILEQEGDWLKIQLDEQIGWIP 78
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R P T + G V++ W +I+ + +G++ ++
Sbjct: 310 DNTNIREEPSTQATTI-KNGKAGEEYTVIEPSGEWYKIQLDEDQVGYVASWVV 361
>gi|228906481|ref|ZP_04070357.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 200]
gi|228853030|gb|EEM97808.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 200]
Length = 384
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKTFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATSNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNVWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKTFI 163
>gi|229120372|ref|ZP_04249619.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228662957|gb|EEL18550.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
Length = 386
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQAEWYKI-LHNGKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E EW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQAEWYKILHNGKAGYVQKAFV 163
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSI 96
>gi|168214889|ref|ZP_02640514.1| NlpC/P60 family protein [Clostridium perfringens CPE str. F4969]
gi|170713667|gb|EDT25849.1| NlpC/P60 family protein [Clostridium perfringens CPE str. F4969]
Length = 557
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + + +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPSTSSDVIG-YLTNGEIFNIDGKEGSWYKI-NANGKVGYIH 102
Query: 112 KSLLSGKR-----------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ +++ N + + + P S +V +
Sbjct: 103 GDYVKEVSGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRG 162
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I+ SG W + G+I +
Sbjct: 163 GQTFEIKGKSGSWYYINANGLTGYIHGDYV 192
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 141 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NANGLTGYIHGDYVQVGENS 198
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
SG +++ + N + + + P S +V + G
Sbjct: 199 SNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQT 258
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +G W T+G + +
Sbjct: 259 FKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G ++ + W I D GT G ++ +
Sbjct: 234 STSLRIRQSPSTSSSVVGS-LSAGQTFKINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 291
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 292 ESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 351
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W G++ + +
Sbjct: 352 LQGKTSSGWFKVNYNGKIGYLHEDYV 377
>gi|186682235|ref|YP_001865431.1| SH3 type 3 domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464687|gb|ACC80488.1| SH3, type 3 domain protein [Nostoc punctiforme PCC 73102]
Length = 179
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 16/170 (9%)
Query: 19 PKILQNSLIF-TLAIYFYLAPILALSHEKEIFEKK-PLPRFVT-IKASRANSRIGPGIMY 75
P L L+F +++ ++ K +K + +VT N R G
Sbjct: 9 PSKLITGLVFSCISVMLNTGIGYQIALAKSTNSQKCDIIAYVTDTDPQGLNVRSGASTYN 68
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLLSGKRSAIVSPWNRKTNN 132
T++ + V+V+ +W QI + GW+ L +
Sbjct: 69 TILGQ-IPINETVQVIGATGDWVQINNASNGFQGTGWVFVPKL---------GLTTQGYG 118
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
++LY +S V + + + C G+W +GW+ K+
Sbjct: 119 TNGVDLYASNSQESQKVRIIPANTAVKLLGCQGDWAQVEYQGVKGWLTKE 168
>gi|164688702|ref|ZP_02212730.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
gi|164602178|gb|EDQ95643.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
Length = 399
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSG 117
I +R N R GP YT+V T L KG+ V+ +++ W +I +++ W+N + L
Sbjct: 44 ITTNRLNMRKGPSTDYTLVGT-LDKGVKVKAIEKSSDGKWLKI-NYNSQNVWVNFAYLQK 101
Query: 118 KRSAIV-SPWNRKTNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLD 174
+S+ + + +N+ K P I+ + + G+W +
Sbjct: 102 DKSSNNDIKLDSQYETTANVNMRKGPSTDYTKIIIVPAQTKITPIKSSSDGKWVQINYKN 161
Query: 175 TEGWIKKQKI 184
GWI Q I
Sbjct: 162 VTGWISAQYI 171
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 12/132 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSG 117
+ N R G + + + G V VV + W ++ ++ GW++ LS
Sbjct: 272 YTTANLNIRDGASTTSSKIGK-IPNGTKVSVVDFNSNKTWAKVV-YNNKTGWVSAQYLST 329
Query: 118 KRSAIVSPWNRKTN-----NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
K P ++ +N+ K P I+ + + I E W
Sbjct: 330 KS---QEPEQKEDTYWTGTTTQNLNMRKGPSTDYSIIITIPKNSDVKIYETKSGWAKIKY 386
Query: 173 LDTEGWIKKQKI 184
EG+ I
Sbjct: 387 KSYEGYCSASFI 398
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 14/135 (10%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKG---LPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+R GPG Y V L KG +PVE++ + W + ++ ++ L
Sbjct: 196 TTEYVRARKGPGTSYDVATV-LAKGTQVVPVEIL-KSGYWAMFK-YNNQYMYVCTDYLEA 252
Query: 118 KRSAIVSPWNRKTNNP------IYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCF 169
+ K +N+ S + K+ G +++ + + W
Sbjct: 253 DNQSTTPTEPEKPITGKDYYTTANLNIRDGASTTSSKIGKIPNGTKVSVVDFNSNKTWAK 312
Query: 170 GYNLDTEGWIKKQKI 184
+ GW+ Q +
Sbjct: 313 VVYNNKTGWVSAQYL 327
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
LS + + E+K + N R GP Y+++ + K V++ + W +I+
Sbjct: 327 LSTKSQEPEQKEDTYWTGTTTQNLNMRKGPSTDYSII-ITIPKNSDVKIYETKSGWAKIK 385
>gi|307265072|ref|ZP_07546632.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919870|gb|EFN50084.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 656
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
LP + + A+ N R GPG Y ++ T + G + V+ + +W + + +GT+GWI
Sbjct: 303 LPSSLMVNANVVNIRTGPGTQYDII-TQVNNGDILSVIDKSGDWYKAKLQNGTVGWIAGW 361
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
L + + N L S
Sbjct: 362 LTIAYNNPNKIASDTSDNLSDRRTLTASNSQSSR 395
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
N +N+ P Q I+ +V G +L++ + SG+W T GWI
Sbjct: 310 NANVVNIRTGPGTQYDIITQVNNGDILSVIDKSGDWYKAKLQNGTVGWIA 359
>gi|228982539|ref|ZP_04142798.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228776722|gb|EEM25030.1| Enterotoxin [Bacillus thuringiensis Bt407]
Length = 444
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ A N R G G + V LT+G V + E NW +I FD G+++K +
Sbjct: 167 VTADVLNVREGAGTQFGKVGR-LTRGKNVTITGESGNWYRIS-FDNASGFVSKDFVKIGV 224
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + VS + N +N+ + S I+ K+ G ++T W
Sbjct: 225 DAGNKETPNQVSKTSNYKINTTTLNVRESGTTASTILGKLHMGAVVTSTAEVNGWLEISF 284
Query: 173 LDTEGWIKKQ 182
+G+I K
Sbjct: 285 NGRKGFISKD 294
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 19/148 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R G G + + L +G + V + W +I ++ G G+++ +S +
Sbjct: 82 VTADVLKVRSGAGTQFEQIGR-LFEGNSLSVTGKEGEWYKI-NYYGKAGFVSSQFVSNSQ 139
Query: 120 S----------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S + + +N+ + Q V ++ G +TI
Sbjct: 140 SQNKGNNQPNKPATTNPTATTGGKKGIVTADVLNVREGAGTQFGKVGRLTRGKNVTITGE 199
Query: 164 SGEWCFGYNLDTEGWIKKQKI-WGIYPG 190
SG W + G++ K + G+ G
Sbjct: 200 SGNWYRISFDNASGFVSKDFVKIGVDAG 227
>gi|229028592|ref|ZP_04184708.1| 3D domain protein [Bacillus cereus AH1271]
gi|228732713|gb|EEL83579.1| 3D domain protein [Bacillus cereus AH1271]
Length = 438
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K+ + V+ T + +W ++ + G P
Sbjct: 111 VRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 163
>gi|297748148|gb|ADI50694.1| Hypothetical protein CTDEC_0017 [Chlamydia trachomatis D-EC]
gi|297749028|gb|ADI51706.1| Hypothetical protein CTDLC_0017 [Chlamydia trachomatis D-LC]
Length = 477
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 17/161 (10%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
+L + + + + A A + A ++ F P IK +R R+
Sbjct: 40 TLSISMLIFALSFGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLA 95
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P ++ L+KG + V+ E +++ + +G G++ ++ +
Sbjct: 96 PHTDSFII-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNV 143
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
+N+ +P + I+A++ G V+ T+ G+W
Sbjct: 144 IEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 184
>gi|228957144|ref|ZP_04118911.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802471|gb|EEM49321.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 384
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNIIETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229108332|ref|ZP_04237949.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|229126151|ref|ZP_04255169.1| Peptidase, M23/M37 [Bacillus cereus BDRD-Cer4]
gi|229143448|ref|ZP_04271874.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST24]
gi|296501472|ref|YP_003663172.1| cell wall endopeptidase [Bacillus thuringiensis BMB171]
gi|228639950|gb|EEK96354.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST24]
gi|228657143|gb|EEL12963.1| Peptidase, M23/M37 [Bacillus cereus BDRD-Cer4]
gi|228674959|gb|EEL30186.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|296322524|gb|ADH05452.1| cell wall endopeptidase [Bacillus thuringiensis BMB171]
Length = 384
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNIIETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|218232789|ref|YP_002365518.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|229042586|ref|ZP_04190327.1| Peptidase, M23/M37 [Bacillus cereus AH676]
gi|229149063|ref|ZP_04277304.1| Peptidase, M23/M37 [Bacillus cereus m1550]
gi|218160746|gb|ACK60738.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|228634262|gb|EEK90850.1| Peptidase, M23/M37 [Bacillus cereus m1550]
gi|228726679|gb|EEL77895.1| Peptidase, M23/M37 [Bacillus cereus AH676]
Length = 384
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|30018899|ref|NP_830530.1| cell wall endopeptidase [Bacillus cereus ATCC 14579]
gi|29894441|gb|AAP07731.1| Cell wall endopeptidase, family M23/M37 [Bacillus cereus ATCC
14579]
Length = 384
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNIIETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229541887|ref|ZP_04430947.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Bacillus
coagulans 36D1]
gi|229326307|gb|EEN91982.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Bacillus
coagulans 36D1]
Length = 1045
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----- 115
K S R +++ L +G V V +W +++ G+++ S L
Sbjct: 130 KGSHLILRSKTSTSSSIL-ASLARGEKVTVYSISGDWAKVK-AGSKTGYVHASFLVNSNP 187
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S + A + + ++ L K S I+A + G +T+ SG+W
Sbjct: 188 DSNTSTSKPAKTTTKYVNVDKGSHLILRSKASTSSSILASLARGEKVTVYSISGDWAKVK 247
Query: 172 NLDTEGWIKKQKI 184
G++ +
Sbjct: 248 AGSKTGYVHASFL 260
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 56 RFVTI-KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++V + K S R +++ L +G V V +W +++ G+++ S
Sbjct: 514 KYVNVDKGSHLILRSKASTSSSIL-ASLARGEKVTVYSISGDWAKVK-AGSKTGYVHASF 571
Query: 115 LSGKRS---------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L+ A + + ++ L K +A ++ G +T+ SG
Sbjct: 572 LANSNPDNHAGTSTPAKTTTKYVNVDKGSHLLLRSKASTSGKKLASLQRGEKVTVYTASG 631
Query: 166 EWCFGYNLDTEGWIKKQKIWGIYPG 190
W G++ + P
Sbjct: 632 PWVKVKARGITGYVLASYLSSSDPD 656
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 12/139 (8%)
Query: 56 RFVTI-KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++V + K S R +++ L +G V V +W +++ G+++ S
Sbjct: 280 KYVNVDKGSHLILRSKASGTASIL-DSLARGEKVTVYSISGDWAKVK-AGSKTGYVHASF 337
Query: 115 LSGKRS---------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L+ A + + ++ L K S I+A + G +T+ SG
Sbjct: 338 LANSNPDSSADTSTPAKTTTKYVNVDKGSHLILRSKASTSSSILASLARGEKVTVYSISG 397
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW G++ +
Sbjct: 398 EWAKVKAGSKTGYVHASFL 416
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 12/139 (8%)
Query: 56 RFVTI-KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++V + K S R +++ L +G V V +W +++ G+++ S
Sbjct: 202 KYVNVDKGSHLILRSKASTSSSIL-ASLARGEKVTVYSISGDWAKVK-AGSKTGYVHASF 259
Query: 115 LSGKRS---------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L+ A + + ++ L K + I+ + G +T+ SG
Sbjct: 260 LANSNPDSSADTSTPAKTTTKYVNVDKGSHLILRSKASGTASILDSLARGEKVTVYSISG 319
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W G++ +
Sbjct: 320 DWAKVKAGSKTGYVHASFL 338
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---------AIVSPWNRKTNN 132
L +G V V W +++ G+++ S L+ A + +
Sbjct: 462 LPRGEKVTVYSISGAWAKVK-AGSKTGYVHASFLANSNPDNHADTSTPAKTTTKYVNVDK 520
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ L K S I+A + G +T+ SG+W G++ +
Sbjct: 521 GSHLILRSKASTSSSILASLARGEKVTVYSISGDWAKVKAGSKTGYVHASFL 572
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 56 RFVTI-KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++V + K S R L +G V V W +++ G G++ S
Sbjct: 592 KYVNVDKGSHLLLRSKASTS-GKKLASLQRGEKVTVYTASGPWVKVK-ARGITGYVLASY 649
Query: 115 LS-----------GKRSAIVSPWNRKTN-NPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
LS G S+ +P + T +NL K P + ++ ++ G + +
Sbjct: 650 LSSSDPDASTADDGNNSSEPTPDSTVTKYTTADLNLRKGPSTLTSVIEVLDKGTAVKVYS 709
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 710 EEDGWAKVEIGGKIGYVSTNYL 731
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 56 RFVTI-KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++V + K S R +++ L +G V V W +++ G+++ S
Sbjct: 358 KYVNVDKGSHLILRSKASTSSSIL-ASLARGEKVTVYSISGEWAKVK-AGSKTGYVHASF 415
Query: 115 LSGKRS---------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
L+ A + + ++ L K S I+A + G +T+ SG
Sbjct: 416 LANSNPDSNADTSTPAKTTTKYVNVDKGSHLILRSKSSTSSSILASLPRGEKVTVYSISG 475
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 476 AWAKVKAGSKTGYVHASFL 494
>gi|219668701|ref|YP_002459136.1| N-acetylmuramoyl-L-alanine amidase [Desulfitobacterium hafniense
DCB-2]
gi|219538961|gb|ACL20700.1| N-acetylmuramoyl-L-alanine amidase [Desulfitobacterium hafniense
DCB-2]
Length = 860
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V A+ N R P + + K ++++ E W Q ++ GWI+ +S
Sbjct: 404 VITAANGLNLRDNPSSSGEKL-VTIPKDATIQILAEQSGWYQTT-YETKTGWISAEYVSL 461
Query: 118 KRS--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S A +P K+ +NL P + V G L I E W
Sbjct: 462 IPSEASDPPPAAPPAPKKGKSTAANGLNLRATPAAAGEKITTVPGGTLFEIIEEENGWYK 521
Query: 170 GYNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 522 ISFDSHTGWVSGEYV 536
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 26/70 (37%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P + +NL + P +A + G L+T+ E W D GW+
Sbjct: 316 TPTTRPKQAEITPAGGLNLRESPSSSGAKLATIPQGTLITLLEEQAGWYKTTFADQTGWV 375
Query: 180 KKQKIWGIYP 189
+ + + P
Sbjct: 376 AAEYLTLVDP 385
>gi|32266745|ref|NP_860777.1| hypothetical protein HH1246 [Helicobacter hepaticus ATCC 51449]
gi|32262796|gb|AAP77843.1| hypothetical protein HH_1246 [Helicobacter hepaticus ATCC 51449]
Length = 263
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 7/142 (4%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
R+ ++ N R P + V+ Y+ G ++++ W ++++
Sbjct: 122 SALPPESNVQTHRYAKYRS---NIRKAPSLESAVIS-YVDVGEVLDILDTQNGWSKVKNA 177
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
G G+I LL S S + + PD+Q+ ++ + + E
Sbjct: 178 RGIEGYIASRLLGE--SFKQSKGEAYIVLADVLKVRAAPDLQAAVIGHLNYNNHTFVLEI 235
Query: 164 SGEWCFGYNLDTE-GWIKKQKI 184
EW + + G++ I
Sbjct: 236 QEEWAKILLSNGQYGYVSSHYI 257
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVFK 194
N+ K P ++S +++ V+ G +L I + W EG+I + + GE FK
Sbjct: 141 NIRKAPSLESAVISYVDVGEVLDILDTQNGWSKVKNARGIEGYIASRLL-----GESFK 194
>gi|227824711|ref|ZP_03989543.1| predicted protein [Acidaminococcus sp. D21]
gi|226905210|gb|EEH91128.1| predicted protein [Acidaminococcus sp. D21]
Length = 414
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 17/160 (10%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
AP + P V + + R GPG+ ++ + G + V+K
Sbjct: 251 PPAPAQPTKQAPAQPAVQGNPGHV--QGTEVRMRRGPGLDQDIIGVF-DDGEALSVLKSD 307
Query: 95 ----ENWRQIRDFDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
W ++ +G GWI S V + + + +
Sbjct: 308 VASGMKWYEVTRANGATGWIAADYCVVADEYNVPSGAVQNGRKGVITGTEVRMRGDASLN 367
Query: 146 SIIVAKVEPGVLLTIRECSGE----WCFGYN-LDTEGWIK 180
++ E G +TI + + W GW+
Sbjct: 368 GDVLGYFEQGETVTILDAADGGGMNWLRVRRENGETGWVA 407
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKSL 114
I + R + V+ Y +G V ++ + NW ++R +G GW+ +
Sbjct: 353 ITGTEVRMRGDASLNGDVLG-YFEQGETVTILDAADGGGMNWLRVRRENGETGWVAAAY 410
>gi|89894287|ref|YP_517774.1| hypothetical protein DSY1541 [Desulfitobacterium hafniense Y51]
gi|89333735|dbj|BAE83330.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 560
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V A+ N R P + + K ++++ E W Q ++ GWI+ +S
Sbjct: 104 VITAANGLNLRDNPSSSGEKL-VTIPKDATIQILAEQSGWYQTT-YETKTGWISAEYVSL 161
Query: 118 KRS--------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S + +P K+ +NL P + V G L I E W
Sbjct: 162 IPSEASDPPPASPPAPKKGKSTAANGLNLRATPAAAGEKITTVPGGTLFEIIEEENGWYK 221
Query: 170 GYNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 222 ISFDSHTGWVSGEYV 236
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 26/70 (37%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P + +NL + P +A + G L+T+ E W D GW+
Sbjct: 16 TPTTRPKQAEITPAGGLNLRESPSSSGAKLATIPQGTLITLLEEQAGWYKTTFADQTGWV 75
Query: 180 KKQKIWGIYP 189
+ + + P
Sbjct: 76 AAEYLTLVDP 85
>gi|30018972|ref|NP_830603.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|29894514|gb|AAP07804.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
Length = 431
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 9 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKV 57
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 58 VGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKDTYYV----------TANVLN 106
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + +W ++ + G P
Sbjct: 107 VRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAP 159
>gi|255348379|ref|ZP_05380386.1| hypothetical protein Ctra70_00090 [Chlamydia trachomatis 70]
gi|255502920|ref|ZP_05381310.1| hypothetical protein Ctra7_00095 [Chlamydia trachomatis 70s]
gi|296438320|gb|ADH20473.1| hypothetical protein E11023_00095 [Chlamydia trachomatis E/11023]
Length = 433
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|237802451|ref|YP_002887645.1| hypothetical protein JALI_0171 [Chlamydia trachomatis B/Jali20/OT]
gi|231273685|emb|CAX10463.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 433
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|237804366|ref|YP_002888520.1| hypothetical protein CTB_0171 [Chlamydia trachomatis B/TZ1A828/OT]
gi|231272666|emb|CAX09569.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
Length = 433
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|166154238|ref|YP_001654356.1| hypothetical protein CTL0272 [Chlamydia trachomatis 434/Bu]
gi|166155113|ref|YP_001653368.1| hypothetical protein CTLon_0267 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335486|ref|ZP_07223730.1| hypothetical protein CtraL_01605 [Chlamydia trachomatis L2tet1]
gi|165930226|emb|CAP03711.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931101|emb|CAP06665.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 433
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|76788729|ref|YP_327815.1| hypothetical protein CTA_0018 [Chlamydia trachomatis A/HAR-13]
gi|76167259|gb|AAX50267.1| hypothetical protein CTA_0018 [Chlamydia trachomatis A/HAR-13]
Length = 433
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|254466995|ref|ZP_05080406.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
gi|206687903|gb|EDZ48385.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
Length = 212
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 29 TLAIYFYLAPILA-LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AI AP A ++ +P+ I+ASR N R GPG Y V+ L G
Sbjct: 119 LAAITAAPAPQTADIAGTAAEPAPEPVIDRRRIRASRVNMRQGPGTKYPVLTRLLA-GEE 177
Query: 88 VEVVKEYE-NWRQIRDFD-GTIGWINKSLLSGKR 119
V V+++ W +R + G +GWI SL+S KR
Sbjct: 178 VIVIEDTGTGWLHLRAPEKGVVGWIAASLVSKKR 211
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN--LDTEGWIKKQK 183
+R+ +N+ + P + ++ ++ G ++ I + W GWI
Sbjct: 147 DRRRIRASRVNMRQGPGTKYPVLTRLLAGEEVIVIEDTGTGWLHLRAPEKGVVGWIAASL 206
Query: 184 I 184
+
Sbjct: 207 V 207
>gi|196249433|ref|ZP_03148131.1| SH3 type 3 domain protein [Geobacillus sp. G11MC16]
gi|196211190|gb|EDY05951.1| SH3 type 3 domain protein [Geobacillus sp. G11MC16]
Length = 874
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 40/205 (19%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++K I+ ++ + ++ F P E K +P V + N R G G
Sbjct: 1 MKKMGKSIVLSTGLLLVSPNFSPIPWNVPVVEAASAVKI-VPT-VYQTTANLNMRTGAGT 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIR---DFDGTI----GWINKSLL----------- 115
Y +V T + KG V+ ++ +W ++ G GW++ S L
Sbjct: 59 KYKIVLT-IPKGKTVKATEKLGDWYKVSYEYSEKGKKYTKTGWVSGSYLKKVSSQPTTGN 117
Query: 116 --------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ K +AI + T N +N+ + IV + G + E G+W
Sbjct: 118 TSQPDKGNTAKPTAITKTVYQTTAN---LNMRTGAGTKYKIVLTIPKGKTVKATEKLGDW 174
Query: 168 CFGYNL--------DTEGWIKKQKI 184
GW+ +
Sbjct: 175 YKVSYEYSEKGKKYTKTGWVSGSYL 199
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 32/168 (19%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR---DFD 104
+ + + V + N R G G Y +V T + KG V+ ++ +W ++
Sbjct: 126 TAKPTAITKTVYQTTANLNMRTGAGTKYKIVLT-IPKGKTVKATEKLGDWYKVSYEYSEK 184
Query: 105 GTI----GWINKSLLSGKRSAIVSPWNRKTNNPIY----------------INLYKKPDI 144
G GW++ S L S + + + + +N+
Sbjct: 185 GKKYTKTGWVSGSYLKKVSSQLTTGNTSQPDKGNTAKPTVITKTVYQTTANLNMRTGAGT 244
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNL--------DTEGWIKKQKI 184
V + G +T E G+W GW+ +
Sbjct: 245 TYKTVITIPKGKNVTATEKLGDWYKVSYEYSEKGKKYTKTGWVSGSYL 292
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------------- 117
PG + + T + KG V +W ++ + G G+++ + L+
Sbjct: 389 PGSAHNRLMT-IPKGTVVSSSLNIGSWYEVT-YKGKKGYVHSAELAKYAPAPSSGSSNPA 446
Query: 118 ----------KRSAIVSPWNRKTNNPIYINL--YKKPDIQSIIVAKVEPG-VLLTIRECS 164
S I + NL K+P + ++A + G +++ S
Sbjct: 447 PGQSAQPNNPSSSTITETGMSGRTFAVRANLNVRKQPSTSADLLATIPKGTIVVPTHRTS 506
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G++ I
Sbjct: 507 NGWYKLKYAGKTGYVSGDYI 526
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-----YENWRQIRDFDGTIGWINKS 113
++ A+ N R P + L + + +++ K+ +W ++ +GT GW++
Sbjct: 809 SVTATALNVREKP-QGNIISQLKLGQYVQLKLTKDGKLEMNGSWYKVVLANGTEGWVSSQ 867
Query: 114 LL 115
+
Sbjct: 868 YI 869
>gi|229095373|ref|ZP_04226364.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
gi|228687919|gb|EEL41806.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
Length = 386
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQGEQGEWYKIS-HNGQTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNDTKYTVATPKLNVRNNASTNGTLLGSLQNGTQIQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K + T + + V ++K ++W ++ + +G++ K + K
Sbjct: 43 VKVDQVALHKEDNTNSTSL-DTIRFNTKVNILKTTKDWYKVS-VNNKVGYVQKDAILQKN 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N+ N +N+ +P+++S I+ + G +TI+ GEW + G++
Sbjct: 101 KLQST--NQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQGEQGEWYKISHNGQTGYV 158
Query: 180 KKQKI 184
+K +
Sbjct: 159 QKAFV 163
>gi|323136508|ref|ZP_08071590.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322398582|gb|EFY01102.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 164
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ---IRDFDGTIGWINKSLL--SGKR 119
A R GP + + G V+V+ Y WR+ +++G G+++ +L SG+
Sbjct: 32 AYMRSGPNAKLPAIAV-IPAGADVQVMNCYGGWRRDWCQVNYNGVTGFVSAGVLAASGRN 90
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDT 175
+ +V+P N+YK P ++ V G + C WC +
Sbjct: 91 NVVVAP----VVTNELGNMYKGPGTNYKVIMAVPGGATVNKGTCVAGWQTNWCQVHYNGR 146
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 147 VGYMMEGLL 155
>gi|65318217|ref|ZP_00391176.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 402
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 49/173 (28%), Gaps = 23/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + I N R P V
Sbjct: 13 MEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKV 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G V V+ W +++ G +I+ +N
Sbjct: 62 VGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLN 110
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K+ + V+ T + W ++ + G P
Sbjct: 111 VRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 163
>gi|18310336|ref|NP_562270.1| enterotoxin [Clostridium perfringens str. 13]
gi|168207603|ref|ZP_02633608.1| NlpC/P60 family protein [Clostridium perfringens E str. JGS1987]
gi|18145016|dbj|BAB81060.1| probable enterotoxin [Clostridium perfringens str. 13]
gi|170661050|gb|EDT13733.1| NlpC/P60 family protein [Clostridium perfringens E str. JGS1987]
Length = 549
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + + +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKI-NANGKVGYIH 102
Query: 112 KSLLSGKR-----------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ +++ N + + + P S +V +
Sbjct: 103 GDYVKEVTGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRG 162
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I+ SG W + G+I +
Sbjct: 163 GQTFEIKGKSGSWYYINANGLTGYIHGDYV 192
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 141 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NANGLTGYIHGDYVQVGENS 198
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
SG +++ + N + + + P S +V + G
Sbjct: 199 SNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQT 258
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +G W T+G + +
Sbjct: 259 FKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G ++ + W I D GT G ++ +
Sbjct: 234 STSLRIRQSPSTSSSVVGS-LSAGQTFKINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 291
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 292 ESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 351
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W G++ + +
Sbjct: 352 LQGKTSSGWFKVNYNGKIGYLHEDYV 377
>gi|314928727|gb|EFS92558.1| bacterial SH3 domain protein [Propionibacterium acnes HL044PA1]
Length = 360
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 55/179 (30%), Gaps = 26/179 (14%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLP---RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
P ++ + P T S N R P V+ L G V
Sbjct: 183 TTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVI-NQLANGTGV 241
Query: 89 EVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY------------ 135
E + NW QIR DG GW ++ L+GK A+ K P
Sbjct: 242 HATGEVHGNWVQIR-ADGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSA 300
Query: 136 -------INLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+N++ P + I+ + G + E G W GW + + G
Sbjct: 301 PIHTTTGVNVHTAPSPNARIITALTQGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTG 359
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 26/164 (15%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F + LP +T N R G + T +G V V W + +G
Sbjct: 113 FGSEALPGTMTAAVP-VNVR-GDAANAGKILTVAERGQQVRVTGRPDRGWVPV-AVNGKS 169
Query: 108 GWINKSLLS--GKRSAIVSPW-------------------NRKTNNPIYINLYKKPDIQS 146
GWI L+ +A P + T +N+ P S
Sbjct: 170 GWIYGRYLTTGKVTTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSS 229
Query: 147 IIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
++ ++ G + E G W GW + + G P
Sbjct: 230 QVINQLANGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTGKLP 273
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ N P ++ T LT+G V E + NW QIR DG GW ++ L+GK
Sbjct: 304 TTTGVNVHTAPSPNARII-TALTQGTGVHATGEVHGNWVQIR-ADGHTGWAYRTYLTGK 360
>gi|196042340|ref|ZP_03109613.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
gi|196026821|gb|EDX65455.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
Length = 386
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I + G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNDKAGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G L + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDSILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + D G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNDKAGYVQKAFV 163
>gi|110799274|ref|YP_696005.1| NlpC/P60 family protein [Clostridium perfringens ATCC 13124]
gi|110673921|gb|ABG82908.1| SH3 domain/NlpC/P60 family protein [Clostridium perfringens ATCC
13124]
Length = 553
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + + +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKI-NANGKVGYIH 102
Query: 112 KSLLSGKR-----------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ +++ N + + + P S +V +
Sbjct: 103 GDYVKEVSGNSNSSSNNSVSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRG 162
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I+ SG W + G+I +
Sbjct: 163 GQTFEIKGKSGSWYYINANGLTGYIHGDYV 192
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 141 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NANGLTGYIHGDYVQVGENS 198
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
SG +++ + N + + + P S +V + G
Sbjct: 199 SNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQT 258
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +G W T+G + +
Sbjct: 259 FKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G ++ + W I D GT G ++ +
Sbjct: 234 STSLRIRQSPSTSSSVVGS-LSAGQTFKINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 291
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 292 ESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 351
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W G++ + +
Sbjct: 352 LQGKTSSGWFKVNYNGKIGYLHEDYV 377
>gi|15834905|ref|NP_296664.1| hypothetical protein TC0285 [Chlamydia muridarum Nigg]
gi|7190327|gb|AAF39153.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 446
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 17/163 (10%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ +L + + + A A + A F P IK +R R
Sbjct: 1 MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFS----PFTGEIKGNRVRLR 56
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+ P +++ L+KG + V+ E +++ + +G G++ ++ +
Sbjct: 57 LAPHTDSSII-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LD 104
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
+N+ +P + I+A++ G V+ T+ G+W
Sbjct: 105 NVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEI 147
>gi|255656933|ref|ZP_05402342.1| hypothetical protein CdifQCD-2_14851 [Clostridium difficile
QCD-23m63]
Length = 283
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 23 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 78
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+NL + S I+ + + + + G+W + G++
Sbjct: 79 ---------SNLNLREDKSTTSNIITVIPEKSRVEVLQVDGDWSKVVYDNKTGYV 124
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL S I+ + G + + + +W EG++ K +
Sbjct: 23 VNLRSAKSTNSSIITVIPQGAKMEVLDEEDDWIKVMYNSQEGYVYKDLV 71
>gi|326201892|ref|ZP_08191762.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325987687|gb|EGD48513.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 296
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I+ + N R P +V+ K V V+ + W +I FDG GW++
Sbjct: 34 IEGTGVNVRKEPNTSASVITKLSNKR--VSVLDKSSGWYKIS-FDGKTGWVSNDY----- 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
I + + N +N S +++ ++ G + I + EW G++
Sbjct: 86 --IKVITTKGSINANGVNFRVGASTSSKVISSLKEGTDVQILDTLNEWHKIKVGSKVGYV 143
Query: 180 KKQKI 184
K+ +
Sbjct: 144 SKKFV 148
>gi|296452224|ref|ZP_06893932.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP08]
gi|296877578|ref|ZP_06901609.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP07]
gi|296258963|gb|EFH05850.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP08]
gi|296431429|gb|EFH17245.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP07]
Length = 289
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 29 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 84
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+NL + S I+ + + + + G+W + G++
Sbjct: 85 ---------SNLNLREDKSTTSNIITVIPEKSRVEVLQVDGDWSKVVYDNKTGYV 130
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI L K + +NL S I+ + G + + + +
Sbjct: 2 RGWICVKLT--KLNIKKYRAPIYKYALANVNLRSAKSTNSSIITVIPQGAKMEVLDEEDD 59
Query: 167 WCFGYNLDTEGWIKKQKI 184
W EG++ K +
Sbjct: 60 WIKVMYNSQEGYVYKDLV 77
>gi|256751634|ref|ZP_05492509.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749443|gb|EEU62472.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
ethanolicus CCSD1]
Length = 1709
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--G 117
+KA N R G V+ L +G V +++E W +I +++G G+I +
Sbjct: 1584 VKALALNVREGASTSTKVIGV-LPRGTVVTLLEEVNGWYKI-NYNGKTGYIYGKYVDVIS 1641
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + K +N+ + + V G L + W G
Sbjct: 1642 SSSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFG 1701
Query: 178 WIKKQ 182
++ +
Sbjct: 1702 YVYAK 1706
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 26/73 (35%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S + P + + +N+ + + ++ + G ++T+ E W
Sbjct: 1565 GKTISVNVTVKEKPQLQGVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKIN 1624
Query: 172 NLDTEGWIKKQKI 184
G+I + +
Sbjct: 1625 YNGKTGYIYGKYV 1637
>gi|172057105|ref|YP_001813565.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171989626|gb|ACB60548.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 480
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R V+ T L KG V VK+ +W +IR +I + + A
Sbjct: 30 TDNVNIRTAATTSAPVITT-LKKGTTVTAVKKTGSWYEIR-HQSKKAFITAAYVKTVP-A 86
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N +N+ +K S + K+ V L++++ +GEW + ++
Sbjct: 87 KAPTTTTYITNTSSVNVREKATTTSKSLGKLAKNVSLSVKKKTGEWYEINYKNKSAYVHT 146
Query: 182 QKI 184
+
Sbjct: 147 TLV 149
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 25/150 (16%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYL-TKGLP----VEVVKEYENWRQIRDFDGTIGWINKS 113
+ K N++ G + T K LP ++V + W QI+ DG ++ S
Sbjct: 181 SSKQYEVNAKEGLNARLSASTTAKIYKTLPHKTVLKVTGSLDKWYQIQL-DGKDLYVASS 239
Query: 114 LL-----------SGKRSAIVSPWNR----KTNNPIYINLYKKPDIQSIIVAKVEPG--- 155
+ V+P ++ K N P +N+ P S + ++ G
Sbjct: 240 YVLATAKDAPPPTPSTPGVSVTPVDQSKAYKVNAPTGLNVRTAPSTTSTVFTQLAHGSTV 299
Query: 156 -VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V S W T ++ K I
Sbjct: 300 QVSGETTGTSAGWYQIKIGTTYYYVAKSYI 329
>gi|168217785|ref|ZP_02643410.1| NlpC/P60 family protein [Clostridium perfringens NCTC 8239]
gi|182380166|gb|EDT77645.1| NlpC/P60 family protein [Clostridium perfringens NCTC 8239]
Length = 553
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + + +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKI-NANGKVGYIH 102
Query: 112 KSLLSGKR-----------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ +++ N + + + P S +V +
Sbjct: 103 GDYVKEVSGNSNSSSNNSGSNSNLDTSLSGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRG 162
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I+ SG W + G+I +
Sbjct: 163 GQTFEIKGKSGSWYYINANGLTGYIHGDYV 192
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 141 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NANGLTGYIHGDYVQVGENS 198
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
SG +++ + N + + + P S +V + G
Sbjct: 199 SNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQT 258
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +G W T+G + +
Sbjct: 259 FKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G ++ + W I D GT G ++ +
Sbjct: 234 STSLRIRQSPSTSSSVVGS-LSAGQTFKINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 291
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 292 ESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 351
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W G++ + +
Sbjct: 352 LQGKTSSGWFKVNYNGKIGYLHEDYV 377
>gi|332676663|gb|AEE73479.1| RlpA-like protein [Propionibacterium acnes 266]
Length = 498
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNTGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 333 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|229171507|ref|ZP_04299088.1| Peptidase, M23/M37 [Bacillus cereus MM3]
gi|228611945|gb|EEK69186.1| Peptidase, M23/M37 [Bacillus cereus MM3]
Length = 386
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGKTGYVQKAFVSNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQTNTKYTVATPKLNVRGNASTSGALLGSLQNGTQIQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VNNKVGYVQKDAILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ K + S + + + I E + W + G+++K I
Sbjct: 44 KVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDAI 96
>gi|228963894|ref|ZP_04125029.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228795745|gb|EEM43218.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 416
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 26/193 (13%)
Query: 1 MFTHAEKILYSLD---LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF 57
MF +KI+ ++ M I++ + A F L + + I
Sbjct: 1 MFFTNKKIMVAIMRTTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVT------- 53
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P VV L G V V+ W +++ G +I+
Sbjct: 54 ----TDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKD 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+N+ + S I+ K++ ++ +W
Sbjct: 109 TYYV----------TANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKT 158
Query: 177 GWIKKQKIWGIYP 189
++ + G P
Sbjct: 159 AYVHVPYLTGKAP 171
>gi|256751235|ref|ZP_05492116.1| 5'-Nucleotidase domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749960|gb|EEU62983.1| 5'-Nucleotidase domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 1284
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS R G ++ L G V +++E W +I ++G G+I ++
Sbjct: 1091 VTASALKVRTGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-AYNGKTGYIYGKYVAATP 1148
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S +V K +N+ + + + V G L + + W ++ G
Sbjct: 1149 DPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGAVPYGTELKVVKEENGWYMVQYNNSFG 1208
Query: 178 WIK 180
++
Sbjct: 1209 YVY 1211
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 44 HEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + V + A S N R+G + + + G ++VVKE W ++
Sbjct: 1145 AATPDPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGA-VPYGTELKVVKEENGWYMVQ- 1202
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ + G++ + K S+ + K +N+ I + + V G LL +
Sbjct: 1203 YNNSFGYVYSGYTNDKASSAIL-KTVKVTAKSGLNVRTGNSINAKKIGAVPYGTLLKVVG 1261
Query: 163 CSGEWCFGYNLDTEGWIKKQ 182
W G++ +
Sbjct: 1262 EYNGWYQIQYKGGFGYVYAK 1281
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + + S I+ + G ++T+ E W G+I + +
Sbjct: 1087 NYGIVTASALKVRTGASTSSKIIGVLPAGKVVTLLEEVNGWYKIAYNGKTGYIYGKYV 1144
>gi|167038940|ref|YP_001661925.1| 5'-nucleotidase domain-containing protein [Thermoanaerobacter sp.
X514]
gi|300913470|ref|ZP_07130787.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X561]
gi|307723515|ref|YP_003903266.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter sp.
X513]
gi|166853180|gb|ABY91589.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X514]
gi|300890155|gb|EFK85300.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X561]
gi|307580576|gb|ADN53975.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter sp.
X513]
Length = 1284
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS R G ++ L G V +++E W +I ++G G+I ++
Sbjct: 1091 VTASALKVRTGASTSSKIIGV-LPAGKVVTLLEEVNGWYKI-AYNGKTGYIYGKYVAATP 1148
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S +V K +N+ + + + V G L + + W ++ G
Sbjct: 1149 DPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGAVPYGTELKVVKEENGWYMVQYNNSFG 1208
Query: 178 WIK 180
++
Sbjct: 1209 YVY 1211
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 44 HEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + V + A S N R+G + + + G ++VVKE W ++
Sbjct: 1145 AATPDPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGA-VPYGTELKVVKEENGWYMVQ- 1202
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ + G++ + K S+ + K +N+ I + + V G LL +
Sbjct: 1203 YNNSFGYVYSGYTNDKASSAIL-KTVKVTAKSGLNVRTGNSINAKKIGAVPYGTLLKVVG 1261
Query: 163 CSGEWCFGYNLDTEGWIKKQ 182
W G++ +
Sbjct: 1262 EYNGWYQIQYKGGFGYVYAK 1281
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + + S I+ + G ++T+ E W G+I + +
Sbjct: 1087 NYGIVTASALKVRTGASTSSKIIGVLPAGKVVTLLEEVNGWYKIAYNGKTGYIYGKYV 1144
>gi|313823271|gb|EFS60985.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA2]
gi|315086755|gb|EFT58731.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA3]
gi|315088949|gb|EFT60925.1| bacterial SH3 domain protein [Propionibacterium acnes HL072PA1]
gi|327448432|gb|EGE95086.1| bacterial SH3 domain protein [Propionibacterium acnes HL013PA2]
Length = 409
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNTGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|50843708|ref|YP_056935.1| lipoprotein A family protein [Propionibacterium acnes KPA171202]
gi|50841310|gb|AAT83977.1| rare lipoprotein A, RlpA family [Propionibacterium acnes KPA171202]
gi|313829308|gb|EFS67022.1| bacterial SH3 domain protein [Propionibacterium acnes HL063PA2]
gi|314918775|gb|EFS82606.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA1]
gi|327443410|gb|EGE90064.1| bacterial SH3 domain protein [Propionibacterium acnes HL043PA2]
Length = 498
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 333 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|284048993|ref|YP_003399332.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283953214|gb|ADB48017.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 174
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV----VKEYENWRQIRDFDGTIGWINKSL 114
TI + R G G ++ Y G VEV V E W ++ DGT+GW+
Sbjct: 33 TIIGTEVRMRKGAGTDTEILG-YFENGEKVEVLKSNVNEGRKWYEVSRKDGTLGWVAGEY 91
Query: 115 L-----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--- 166
S S + + + P+ ++ G ++TI + +
Sbjct: 92 CRVPEGSLIPSVARLEDRKGRITGTEVRMRSDPNQNGDVLDYFTKGEIVTILDAADGGGL 151
Query: 167 -WCFGYNLDTE-GWIK 180
W + + GW+
Sbjct: 152 HWTKVQRENGDIGWVA 167
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKSL 114
I + R P V+ Y TKG V ++ + +W +++ +G IGW+ +
Sbjct: 113 ITGTEVRMRSDPNQNGDVL-DYFTKGEIVTILDAADGGGLHWTKVQRENGDIGWVASAY 170
>gi|242309094|ref|ZP_04808249.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239524518|gb|EEQ64384.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 238
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 18/145 (12%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF--DGTIGWI---N 111
++T K N R P ++ LT + ++++ W I + T+GW+
Sbjct: 92 YITTKVRALNIRQEPNTTSPIIGK-LTSNMQAVILEDNGEWLLIGAAQNNNTLGWVLKNY 150
Query: 112 KSLLSGKR--------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+L + + T+ +N+ ++P+ S I+ + P + I E
Sbjct: 151 TKILPKTPIIHDMEEITLDIHIPQYYTSKVPRLNIRQEPNTTSNILGTLTPNDSIEILET 210
Query: 164 SGEWCFGY----NLDTEGWIKKQKI 184
G+W + GW+ ++ +
Sbjct: 211 KGDWVRFQDINPSSQKNGWVMRRFL 235
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWI 110
+P++ T K R N R P ++ T LT +E+++ +W + +D + + GW+
Sbjct: 172 IPQYYTSKVPRLNIRQEPNTTSNILGT-LTPNDSIEILETKGDWVRFQDINPSSQKNGWV 230
Query: 111 NKSLL 115
+ L
Sbjct: 231 MRRFL 235
>gi|182626471|ref|ZP_02954222.1| NlpC/P60 family protein [Clostridium perfringens D str. JGS1721]
gi|177908211|gb|EDT70772.1| NlpC/P60 family protein [Clostridium perfringens D str. JGS1721]
Length = 557
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L G E+ + +W I + +G G+I+ +
Sbjct: 141 STSLRVRQSPSTSSSVVGS-LRGGQTFEIKGKSGSWYYI-NSNGLTGYIHGDYVQVGENS 198
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
SG +++ + N + + + P S +V + G
Sbjct: 199 SNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQT 258
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +G W T+G + +
Sbjct: 259 FKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 26/150 (17%)
Query: 59 TIKASRA-------NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++K + R P V+ YLT G + + +W +I + +G +G+I+
Sbjct: 45 SVKKGQVINVSTNLRIRKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKI-NANGKVGYIH 102
Query: 112 KSLLSGKR-----------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ +++ N + + + P S +V +
Sbjct: 103 GDYVKEVSGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRG 162
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I+ SG W + + G+I +
Sbjct: 163 GQTFEIKGKSGSWYYINSNGLTGYIHGDYV 192
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
++ R P +VV + L+ G ++ + W I D GT G ++ +
Sbjct: 234 STSLRIRQSPSTSSSVVGS-LSAGQTFKINGKNGAWYNI-DAQGTKGHVHGDYVQVLSGN 291
Query: 116 ----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + N + L +P S ++A + P T
Sbjct: 292 EGSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFT 351
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W G++ + +
Sbjct: 352 LQGKTSSGWFKVNYNGKIGYLHEDYV 377
>gi|313813615|gb|EFS51329.1| bacterial SH3 domain protein [Propionibacterium acnes HL025PA1]
gi|313833229|gb|EFS70943.1| bacterial SH3 domain protein [Propionibacterium acnes HL056PA1]
gi|313839135|gb|EFS76849.1| bacterial SH3 domain protein [Propionibacterium acnes HL086PA1]
gi|314916679|gb|EFS80510.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA4]
gi|314984928|gb|EFT29020.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA1]
gi|315100306|gb|EFT72282.1| bacterial SH3 domain protein [Propionibacterium acnes HL059PA2]
gi|315102661|gb|EFT74637.1| bacterial SH3 domain protein [Propionibacterium acnes HL046PA1]
gi|328755462|gb|EGF69078.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA1]
gi|328758450|gb|EGF72066.1| bacterial SH3 domain protein [Propionibacterium acnes HL025PA2]
Length = 409
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|314923974|gb|EFS87805.1| bacterial SH3 domain protein [Propionibacterium acnes HL001PA1]
Length = 408
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSA-SSNS 63
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V E W + +GT GWI + L+ + V P
Sbjct: 64 GKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + + G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQMQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G ++V W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQMQVTGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 170 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 229
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 SGQVINQLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 272
>gi|282855325|ref|ZP_06264656.1| bacterial SH3 domain protein [Propionibacterium acnes J139]
gi|282581572|gb|EFB86958.1| bacterial SH3 domain protein [Propionibacterium acnes J139]
Length = 490
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 4 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSA-SSNS 56
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V E W + +GT GWI + L+ + V P
Sbjct: 57 GKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + + G W GWI + +
Sbjct: 116 IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 207 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-TNGYTGWAYRTHLT 264
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 265 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 324
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 325 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 354
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 106 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 162
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 163 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 222
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 223 SGQVINQLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 265
>gi|289428277|ref|ZP_06429969.1| bacterial SH3 domain protein [Propionibacterium acnes J165]
gi|289158524|gb|EFD06735.1| bacterial SH3 domain protein [Propionibacterium acnes J165]
Length = 488
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 4 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 57
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 58 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 116 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 205 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 262
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 263 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 322
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 323 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 106 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 162
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 163 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 222
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 223 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|255310817|ref|ZP_05353387.1| hypothetical protein Ctra62_00090 [Chlamydia trachomatis 6276]
gi|255317117|ref|ZP_05358363.1| hypothetical protein Ctra6_00090 [Chlamydia trachomatis 6276s]
Length = 433
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK SR R+ P
Sbjct: 2 LIFALSCGADACLCAADLSKAKLEASVGDRAAFS----PFTGEIKGSRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|255506589|ref|ZP_05382228.1| hypothetical protein CtraD_00090 [Chlamydia trachomatis D(s)2923]
Length = 433
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSFGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|15604735|ref|NP_219519.1| hypothetical protein CT017 [Chlamydia trachomatis D/UW-3/CX]
gi|3328406|gb|AAC67607.1| hypothetical protein CT_017 [Chlamydia trachomatis D/UW-3/CX]
gi|289525062|emb|CBJ14532.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296434601|gb|ADH16779.1| hypothetical protein E150_00090 [Chlamydia trachomatis E/150]
gi|296435532|gb|ADH17706.1| hypothetical protein G9768_00090 [Chlamydia trachomatis G/9768]
gi|296436456|gb|ADH18626.1| hypothetical protein G11222_00090 [Chlamydia trachomatis G/11222]
gi|296437392|gb|ADH19553.1| hypothetical protein G11074_00090 [Chlamydia trachomatis G/11074]
gi|297139891|gb|ADH96649.1| hypothetical protein CTG9301_00090 [Chlamydia trachomatis G/9301]
Length = 433
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + A A + A ++ F P IK +R R+ P
Sbjct: 2 LIFALSFGADACLCAADLSKAKVEASVGDRAAFS----PFTGEIKGNRVRLRLAPHTDSF 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEI 140
>gi|313819140|gb|EFS56854.1| bacterial SH3 domain protein [Propionibacterium acnes HL046PA2]
Length = 495
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 212 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 269
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A N + P +N+ P + + + G
Sbjct: 270 GNVPAAQPIKNAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 329
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 330 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 359
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|314965112|gb|EFT09211.1| bacterial SH3 domain protein [Propionibacterium acnes HL082PA2]
gi|315090909|gb|EFT62885.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA4]
Length = 408
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSA-SSNS 63
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V E W + +GT GWI + L+ + V P
Sbjct: 64 GKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + + G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 170 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 229
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 SGQVINQLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 272
>gi|255102119|ref|ZP_05331096.1| hypothetical protein CdifQCD-6_14981 [Clostridium difficile
QCD-63q42]
gi|328887769|emb|CAJ69901.2| conserved hypothetical protein with SH3 domain [Clostridium
difficile]
Length = 283
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 23 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 78
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI--KKQ 182
+NL + S I+ + + + + G+W D G++
Sbjct: 79 ---------SNLNLREDKSTTSNIITVIPEKSRVEVLQVDGDWSKVVYDDKIGYVFNYFL 129
Query: 183 KIWGIYPGEV 192
I G P E+
Sbjct: 130 SIDGNKPNEL 139
>gi|289424861|ref|ZP_06426641.1| bacterial SH3 domain protein [Propionibacterium acnes SK187]
gi|289154732|gb|EFD03417.1| bacterial SH3 domain protein [Propionibacterium acnes SK187]
Length = 488
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 4 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 57
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 58 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 116 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 205 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 262
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 263 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 322
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 323 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 106 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 162
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 163 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 222
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 223 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|117923776|ref|YP_864393.1| SH3 type 3 domain-containing protein [Magnetococcus sp. MC-1]
gi|117607532|gb|ABK42987.1| SH3, type 3 domain protein [Magnetococcus sp. MC-1]
Length = 1751
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 10/154 (6%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P ++ + + + A R GPG + + Y+ +G + + + W
Sbjct: 1019 PASSMVVQGVAVSPDQAAAYWVVNADTVRLRGGPGTQFEQMG-YVGQGDVLIATAQQDAW 1077
Query: 98 RQI--RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV--E 153
Q+ GWI LL + + V + N+ +P +S V ++ +
Sbjct: 1078 LQVHMEQEPAKQGWIYAPLL-RQGAGQVMAGQPAALRAVLTNMRAEPSEESNKVLRLYQD 1136
Query: 154 PGVLLTIRECSGEWCFGYNL---DTEGWIKKQKI 184
GV+L + E W GW+++ +
Sbjct: 1137 QGVML-VAEPVEGWVQVQRADGIGGVGWVREDLV 1169
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 10/154 (6%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P ++ + + + A R GPG + + Y+ +G + + + W
Sbjct: 504 PASSMVVQGVAVSPDQAAAYWVVNADTVRLRGGPGTQFEQMG-YVGQGDVLIATAQQDAW 562
Query: 98 RQI--RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV--E 153
Q+ GWI LL + + V + N+ + +S V ++ +
Sbjct: 563 LQVHMEQEPAKQGWIYAPLL-RQGAGQVMAGQPAALRAVLTNMRAESSEESNKVLRLYQD 621
Query: 154 PGVLLTIRECSGEWCFGYNL---DTEGWIKKQKI 184
GV+L + E W GW+++ +
Sbjct: 622 QGVML-VAEPVEGWVQVQRADGIGGVGWVREDLV 654
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 51 KKPLPRFV--TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI- 107
K+ +P + N R G G + V + +G + ++ W IR +
Sbjct: 204 KRVMPEMAHWVVNVDAVNLREGAGRRFAVQGQ-VRQGDLLIASQQQGAWLHIRTERDSRV 262
Query: 108 -GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSG 165
GW++ LL ++V T INL +P+ +S + ++ + + E +
Sbjct: 263 TGWVSAELLRQAAGSVVQ-GEAATPRVEQINLRAEPNAESQKLLRIYMDQQVTMVSEPNN 321
Query: 166 EWCFGYNL---DTEGWIKKQKI 184
W GW+++ +
Sbjct: 322 GWVQVQRADGLGGVGWVREDLV 343
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 13/154 (8%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
++A + + F P R+V +K A R GPG + + G + V+++ + W
Sbjct: 1425 LVAKNQNADGFT--PNSRWV-VKVQSARVRQGPGSEFATLDVAHH-GEVLIVLEQQKGWM 1480
Query: 99 QIR-DFDGTI---GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++R ++ GWI LL + P NL +P ++ + ++
Sbjct: 1481 RVRQEYKNAKQFNGWIYAELLKNATDTEPRGTLAEVVVP-QANLRAEPSAEADKLLRLYQ 1539
Query: 155 G-VLLTIRECSGEWCFGYNLDTE---GWIKKQKI 184
G ++ ++E W D GWI + I
Sbjct: 1540 GQAMVMLQESQQGWQKVQRADGVGGPGWINARLI 1573
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 36/164 (21%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINK 112
R V ++ A R P VV K P+ V +E ++NW ++ +D G GWI
Sbjct: 109 RTVEVRVLGAKVRQSPHAGAPVVMQVFRK-TPLVVFEENHDNWMRVARQDGFGPQGWIYG 167
Query: 113 SLLSG--KRSAIVSPWNRKTNNP---------------------------IYINLYKKPD 143
L+ R A + P +NL +
Sbjct: 168 DLVDQALARDAESAKPQPPMQEPVALGGDTGPAEEIKRVMPEMAHWVVNVDAVNLREGAG 227
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNL---DTEGWIKKQKI 184
+ + +V G LL + G W GW+ + +
Sbjct: 228 RRFAVQGQVRQGDLLIASQQQGAWLHIRTERDSRVTGWVSAELL 271
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 8/105 (7%)
Query: 88 VEVVKEYENWRQIRDFDG---TIGWINKSLLSGKRSAIVSPWNRKTNNPIY-INLYKKPD 143
V+V++E W ++R G GW KS L + ++R + + + P
Sbjct: 66 VQVLEEQGEWVRVRAEWGSAEDTGWTLKSGLEPVEQRLPQHFDRTVEVRVLGAKVRQSPH 125
Query: 144 IQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDT---EGWIKKQKI 184
+ +V +V L + E W D +GWI +
Sbjct: 126 AGAPVVMQVFRKTPLVVFEENHDNWMRVARQDGFGPQGWIYGDLV 170
>gi|313808545|gb|EFS47008.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA2]
gi|313826969|gb|EFS64683.1| bacterial SH3 domain protein [Propionibacterium acnes HL063PA1]
gi|314979868|gb|EFT23962.1| bacterial SH3 domain protein [Propionibacterium acnes HL072PA2]
gi|314990761|gb|EFT34852.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA3]
Length = 406
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|315081074|gb|EFT53050.1| bacterial SH3 domain protein [Propionibacterium acnes HL078PA1]
Length = 409
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWAPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|295131797|ref|YP_003582460.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|291375250|gb|ADD99104.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
Length = 488
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 4 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 57
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 58 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 116 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 205 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 262
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 263 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 322
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 323 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 106 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 162
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 163 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 222
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 223 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|315094637|gb|EFT66613.1| bacterial SH3 domain protein [Propionibacterium acnes HL060PA1]
Length = 408
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSA-SSNS 63
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V E W + +GT GWI + L+ + V P
Sbjct: 64 GKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + + G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 170 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 229
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 SGQVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRPHLTG 272
>gi|313792472|gb|EFS40563.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA1]
Length = 495
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 212 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 269
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 270 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 329
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 330 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 359
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|224436982|ref|ZP_03657963.1| hypothetical protein HcinC1_03370 [Helicobacter cinaedi CCUG 18818]
gi|313143455|ref|ZP_07805648.1| predicted protein [Helicobacter cinaedi CCUG 18818]
gi|313128486|gb|EFR46103.1| predicted protein [Helicobacter cinaedi CCUG 18818]
Length = 271
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLS------ 116
R N R P ++ + G +E++ E + W +++ G G++ LL+
Sbjct: 147 RINIRQTPSSESAIISR-VAVGEALEILSDEQDGWSKVKSRFGVEGYVASRLLTQNLGLQ 205
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
G+ +V+ +N+ K D Q ++ ++ + + + E GEW +
Sbjct: 206 NGEPYVVVA---------NALNVRSKADSQGAVIGRLSHNMRIYVLETQGEWAKIQLPNK 256
Query: 176 E-GWIKKQKI 184
+ G+I I
Sbjct: 257 QYGYISLNHI 266
>gi|314921961|gb|EFS85792.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA3]
gi|314958665|gb|EFT02767.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA1]
gi|315079136|gb|EFT51141.1| bacterial SH3 domain protein [Propionibacterium acnes HL053PA2]
gi|315110472|gb|EFT82448.1| bacterial SH3 domain protein [Propionibacterium acnes HL030PA2]
gi|327451767|gb|EGE98421.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA3]
gi|328761516|gb|EGF75036.1| lipoprotein A, RlpA family [Propionibacterium acnes HL099PA1]
Length = 406
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|228937991|ref|ZP_04100612.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970868|ref|ZP_04131505.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977472|ref|ZP_04137864.1| Peptidase, M23/M37 [Bacillus thuringiensis Bt407]
gi|228782116|gb|EEM30302.1| Peptidase, M23/M37 [Bacillus thuringiensis Bt407]
gi|228788677|gb|EEM36619.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821617|gb|EEM67621.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938497|gb|AEA14393.1| cell wall endopeptidase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 384
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G + V ++ W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFITVQEDQGEWYKIS-HNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V +++ W ++ +G++ K LL K + ++ N +N+
Sbjct: 64 IRFNTKVNILETTNGWYKVS-VHNKVGYVQKDAILLKNK----LQSNDQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|255654265|ref|ZP_05399674.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296452554|ref|ZP_06894250.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296881034|ref|ZP_06904978.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296258602|gb|EFH05501.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296427968|gb|EFH13871.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 340
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 13/175 (7%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--IFEKKPLPRFVTIKASRANSRIGPG 72
+K + + + + +++ + S K+ + L + +K A + G
Sbjct: 3 KKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNLGEYKEVKYKVAKIKDGVA 62
Query: 73 IMYTVVCTYLT---KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
I G V+ W +++ DG GW+ +
Sbjct: 63 IKIREEGQVQNIAYSGDEFTVLGTQGEWVKVKVEDG-EGWLATRYVD-------ISEGVG 114
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL K S ++ ++E G L + E +G+W + +TEG++K I
Sbjct: 115 YTNADKVNLRKDKSESSEVIEELEKGSSLLVLEENGDWLKVKDGETEGYVKSSYI 169
>gi|126700628|ref|YP_001089525.1| hypothetical protein CD3007 [Clostridium difficile 630]
Length = 289
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 29 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 84
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI--KKQ 182
+NL + S I+ + + + + G+W D G++
Sbjct: 85 ---------SNLNLREDKSTTSNIITVIPEKSRVEVLQVDGDWSKVVYDDKIGYVFNYFL 135
Query: 183 KIWGIYPGEV 192
I G P E+
Sbjct: 136 SIDGNKPNEL 145
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI L K + +NL S I+ + G + + + +
Sbjct: 2 RGWICVKLT--KLNIKKYRAPIYKYALANVNLRSAKSTNSSIITVIPQGAKMEVLDEEDD 59
Query: 167 WCFGYNLDTEGWIKKQKI 184
W EG++ K +
Sbjct: 60 WIKVMYNSQEGYVYKDLV 77
>gi|312621911|ref|YP_004023524.1| nlp/p60 protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202378|gb|ADQ45705.1| NLP/P60 protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 319
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 31/175 (17%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ + L I+ A + + S N R P V+ +
Sbjct: 3 LKSLIAIILGIFLMFFSAKAFAQSAQA-------------KSTINIRSAPSTSSKVLGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKTNN------ 132
KG +V+ W +I +DG +G++ ++ +GKRSA+ +
Sbjct: 50 -PKGFKAQVLSNAGGWVKIS-YDGIVGYVKSDYITITNGKRSAVSNTSRASVAKTPAKAA 107
Query: 133 -----PIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 108 QATVLKDNARLRTDMSTTSKVLKTLKNGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S ++ G + +G W G++K I
Sbjct: 25 QSAQAKSTINIRSAPSTSSKVLGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
>gi|255307988|ref|ZP_05352159.1| hypothetical protein CdifA_15461 [Clostridium difficile ATCC 43255]
Length = 283
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 23 VNLRSAKSTNSSIITV-IPQGAKMEVLNEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 78
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI--KKQ 182
+NL + S I+ + + + + G+W D G++
Sbjct: 79 ---------SNLNLREDKSTTSNIITVIPEKSRVEVLQVDGDWSKVVYDDKIGYVFNYFL 129
Query: 183 KIWGIYPGEV 192
I G P E+
Sbjct: 130 SIDGNKPNEL 139
>gi|164686900|ref|ZP_02210928.1| hypothetical protein CLOBAR_00496 [Clostridium bartlettii DSM
16795]
gi|164604290|gb|EDQ97755.1| hypothetical protein CLOBAR_00496 [Clostridium bartlettii DSM
16795]
Length = 408
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 19/185 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK----------ASRAN 66
K + ++ LA + S + TIK S
Sbjct: 1 MQSKNFKKFMVTGLASVLCAGGMSVASLPSYNSDYVATAYAATIKDTALKATGTVNSNVF 60
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL---SGKRSAI 122
R GPG Y+ + L KG V++V + NW +++ G G++ + S +
Sbjct: 61 LRKGPGTSYSKI-VVLKKGAKVDIVAKSSNNWYKVKYGKG-FGYVYSKYVTVKSETPTTK 118
Query: 123 VSPWNRKTNN-PIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWI 179
T + + K + + ++ G +TI + G W G++
Sbjct: 119 KDVAYNATGTVKSNVYVRKTASTSAKKLGVLKKGTKVTIVAKNYTGNWYKVKYNKGFGYV 178
Query: 180 KKQKI 184
+ +
Sbjct: 179 SAKYV 183
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLS 116
T+K++ R + L KG V +V + NW +++ ++ G+++ ++
Sbjct: 128 TVKSN-VYVRKTASTSAKKLGV-LKKGTKVTIVAKNYTGNWYKVK-YNKGFGYVSAKYVT 184
Query: 117 ---GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGY 171
+ ++ + + + + + ++ G +TI + + W
Sbjct: 185 VKAPTPTHQDVAFDATGTIKSNVYVRETASTSAKKLGVLKKGTEVTIVAKTSTEAWYKVK 244
Query: 172 NLDTEGWIKKQKI 184
D G++ + I
Sbjct: 245 YNDGYGYVSAKYI 257
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 6/129 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLS 116
TIK++ R + L KG V +V + E W +++ DG G+++ ++
Sbjct: 276 TIKSN-VYVRETSNTSAKKLGV-LKKGTEVTIVAKTSTEAWYKVKYNDG-YGYVSSKYVT 332
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDT 175
+ + + ++ + + G + + +C W D
Sbjct: 333 LTSEQPEVQYPATAVANHDVYVRDGGSPKAKKLGAITKGTKVTVVEKCQYNWYKIQYKDG 392
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 393 FGYVYGEYL 401
>gi|229917929|ref|YP_002886575.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
gi|229469358|gb|ACQ71130.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
Length = 500
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 12/137 (8%)
Query: 56 RFVTI--------KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
++V++ R N R+ VV + V+ V Y +W ++ F+G
Sbjct: 98 QYVSVSNTSAYYKTTDRLNMRLTAASWSDVVTV-IPADATVKYVSRYGSWYKVT-FNGKT 155
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
G++ + L ++ P + +NL S +V + G + G W
Sbjct: 156 GYVASAYL--TPTSAPVPPSDYYKTTANLNLRLSAASWSSVVTTIPSGATVKYVSRYGSW 213
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ +
Sbjct: 214 YKVTYNGKTGYVSSDYL 230
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 7/145 (4%)
Query: 42 LSHEKEIFEKKPLP--RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
++ P+P + A+ N R+ +VV T + G V+ V Y +W +
Sbjct: 158 VASAYLTPTSAPVPPSDYYKTTAN-LNLRLSAASWSSVVTT-IPSGATVKYVSRYGSWYK 215
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ ++G G+++ L+ +A V+P + + +N+ S ++ + G ++
Sbjct: 216 VT-YNGKTGYVSSDYLTAT-TAPVTPSSYYETT-VNLNMRLSAASWSDVLTVIPAGSVVK 272
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 273 YVSRYDSWYKVTYNGKTGYVASEYL 297
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R+ V+ T + G V + Y +W ++ + G G++ +S
Sbjct: 48 TTANLNLRLSAATWSPVLLT-IPSGSRVTYISTYGSWYKVS-YGGKTGYVASQYVS---- 101
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
VS + +N+ S +V + + G W G++
Sbjct: 102 --VSNTSAYYKTTDRLNMRLTAASWSDVVTVIPADATVKYVSRYGSWYKVTFNGKTGYVA 159
Query: 181 KQKI 184
+
Sbjct: 160 SAYL 163
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 20/64 (31%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ V+ +NL S ++ + G +T G W G++
Sbjct: 37 STVAEAASIYTTTANLNLRLSAATWSPVLLTIPSGSRVTYISTYGSWYKVSYGGKTGYVA 96
Query: 181 KQKI 184
Q +
Sbjct: 97 SQYV 100
>gi|314982056|gb|EFT26149.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA3]
Length = 340
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V T +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSA-SSNSGKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + + G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 173 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 232
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 SGQVINQLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 275
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 22/118 (18%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 217 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-TNGYTGWAYRTHLT 274
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPG 155
G A + + P +N+ P + + + G
Sbjct: 275 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQG 332
>gi|160881191|ref|YP_001560159.1| peptidase M23B [Clostridium phytofermentans ISDg]
gi|160429857|gb|ABX43420.1| peptidase M23B [Clostridium phytofermentans ISDg]
Length = 377
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R G ++ L +G +V +W +I G+I LS +A+
Sbjct: 103 DYVNIRSGASADSSLAGR-LYRGSAATIVGVEGDWTRIV-SGKVEGYIKSDYLSTGDNAV 160
Query: 123 VSPW----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
I +N+ P S + ++ G L I E EW +T+ +
Sbjct: 161 KLAQKCYVQYAQATCITLNVRTAPSENSTRLGQIAKGEKLEILEILDEWVKVDYNETDAY 220
Query: 179 IKKQKIWGIY 188
+ K + +Y
Sbjct: 221 VSKSYVDFVY 230
>gi|319650656|ref|ZP_08004796.1| hypothetical protein HMPREF1013_01401 [Bacillus sp. 2_A_57_CT2]
gi|317397837|gb|EFV78535.1| hypothetical protein HMPREF1013_01401 [Bacillus sp. 2_A_57_CT2]
Length = 311
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L ++ L P+L + + ++ + + R G Y +V T
Sbjct: 1 MKKFLASSVLATAALFPVLVNAEDIDLPANM-------LVGQKVEIRSGATASYPLV-TS 52
Query: 82 LTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRS--AIVSPWNRKTNNPI 134
L+ G V V+ E+ N W ++ D GW S + + + + + +
Sbjct: 53 LSTGKKVTVIDEFTNSAGELWYRV-DLGTNKGWGLASSFTAQSTGDSGIQIGKQAIITGD 111
Query: 135 YINLYKKPDIQSIIVAKVEPG----VLLTIRECSGE-WCFGYNLDTEGWIKKQKI 184
+N+ K +AK+ G V+ + + SGE W + +GWI + +
Sbjct: 112 NVNVRKGATTSYEPIAKLSKGTSVKVIDSFKNSSGELWYRIESGVIKGWIIEDYL 166
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSL 114
I N R G Y + L+KG V+V+ ++N W +I GWI +
Sbjct: 108 ITGDNVNVRKGATTSYEPI-AKLSKGTSVKVIDSFKNSSGELWYRIE-SGVIKGWIIEDY 165
Query: 115 LSGKRSAIVSPWNRKTNNP--IYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE-W 167
L ++T + K I+ V +TI + +GE W
Sbjct: 166 LKADVEVKPPAPVKETKTVQIDKAPVRKGATDSYSIITYVNKNQTVTIIDTFKNANGEVW 225
Query: 168 CFGYNLDTEGWIKKQK 183
+GWIK+
Sbjct: 226 YRADLGTVQGWIKETA 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 12/148 (8%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----- 96
L + E+ P+ T++ +A R G Y+++ TY+ K V ++ ++N
Sbjct: 166 LKADVEVKPPAPVKETKTVQIDKAPVRKGATDSYSII-TYVNKNQTVTIIDTFKNANGEV 224
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W + D GWI ++ S KT + K IV VE
Sbjct: 225 WYR-ADLGTVQGWIKETAFQAVTLPPASETGSKTVMIDKAPVRKGATDSYSIVTYVEKNQ 283
Query: 157 LLTIRECSGE-----WCFGYNLDTEGWI 179
+ I + W +GWI
Sbjct: 284 KVNIIDSFKNANGEVWYRADLGTVQGWI 311
>gi|261420598|ref|YP_003254280.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|319768269|ref|YP_004133770.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC52]
gi|261377055|gb|ACX79798.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|317113135|gb|ADU95627.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC52]
Length = 815
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 78/193 (40%), Gaps = 21/193 (10%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
T+ +++ Y +DL + + L + I + + + +PL V++
Sbjct: 289 TNGQELWYRVDLGHVRGWVSEKVLTMSSTI-----SVPSGVSDASSISGQPLTVSVSV-- 341
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSG 117
AN R P + VV T L KG + + ++ W ++ T+GW+++++++
Sbjct: 342 --ANVRQAPSLKAKVV-TQLKKGTKLNSLSSAKDASGALWYKVSLNGKTLGWVHETVVTK 398
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFG-Y 171
S S +K L+ +P + + ++ ++ +T+ + + +W
Sbjct: 399 SYLSPPASQGKQKQVTTANAALFAEPSLSAAVIERIAKNRTVTVLKTTEASPFDWVQVTS 458
Query: 172 NLDTEGWIKKQKI 184
GW+ ++
Sbjct: 459 ASGKTGWMPAFEV 471
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRSA 121
R G Y V + + G V V+ E++N W +I + G GW S + +
Sbjct: 115 LRRGATDSYRAVGS-IPAGQQVNVIDEFQNSYGETWYRIE-YGGVTGWTRADSFSNQPPS 172
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTE 176
+ R I + K +V + G +++I ++ +
Sbjct: 173 M-LVGKRAVIAANDIAMRKGASPYYPVVKTLSNGDVVSIIAEFTNSLGEQYVRVEWAGVK 231
Query: 177 GWIKKQKIW 185
GW+K ++I+
Sbjct: 232 GWVKTEQIY 240
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 21/174 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
++ +L+ L L P AL+ + P T+ + N R G Y +V
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSP-----TLMVAEHNALLRRGATDSYQIV- 54
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
++ G V+V+ +++N W +I + G GW S + S +
Sbjct: 55 ESISAGQQVKVIDKFQNAAGETWYRIE-YKGITGWARADDFSEA--HVSSAFPNVMFAKQ 111
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIKKQK 183
L + V + G + + + W GW +
Sbjct: 112 DSLLRRGATDSYRAVGSIPAGQQVNVIDEFQNSYGETWYRIEYGGVTGWTRADS 165
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--IFEKKPLPRFVTIKA 62
AE L + + + L T A F + + S + + P +V +K
Sbjct: 422 AEPSLSAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMPAFEVKAPSYVYVKQ 481
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ R G Y + L + V+ EY W + +G GW+ +S S
Sbjct: 482 AGTPLRRGASSNYQSL-KTLAANERLAVLYEYHGWLNVETSNGVRGWVEESSTS 534
>gi|312127116|ref|YP_003991990.1| nlp/p60 protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777135|gb|ADQ06621.1| NLP/P60 protein [Caldicellulosiruptor hydrothermalis 108]
Length = 319
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 31/175 (17%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ + TL I+ A + + S N R P ++ +
Sbjct: 3 LRSLIAITLGIFLMFFSAKAFAQSAQA-------------KSTINIRSAPSTSSKILGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKTNN------ 132
KG +V+ W +I +DG +G++ ++ + KRSA+ +
Sbjct: 50 -PKGFKTQVLSNAGGWVKIS-YDGIVGYVKSDYITITNEKRSAVSNTSRASVAKTAAKAA 107
Query: 133 -----PIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
L S I+ ++ G + + W T G++
Sbjct: 108 QATVLKDNARLRSDMSTSSKILKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S I+ G + +G W G++K I
Sbjct: 25 QSAQAKSTINIRSAPSTSSKILGVFPKGFKTQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLL 115
A R ++ L G V V+ +E W +++ DGT+G++ LL
Sbjct: 113 KDNARLRSDMSTSSKIL-KTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMAYYLL 166
>gi|126697756|ref|YP_001086653.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|254973843|ref|ZP_05270315.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255091228|ref|ZP_05320706.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255099346|ref|ZP_05328323.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
gi|255305179|ref|ZP_05349351.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
gi|255312887|ref|ZP_05354470.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
gi|255515646|ref|ZP_05383322.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255648740|ref|ZP_05395642.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|260681962|ref|YP_003213247.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260685560|ref|YP_003216693.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|306518858|ref|ZP_07405205.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
gi|115249193|emb|CAJ67005.1| putative cell wall hydrolase [Clostridium difficile]
gi|260208125|emb|CBA60402.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260211576|emb|CBE01779.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 340
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 13/175 (7%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--IFEKKPLPRFVTIKASRANSRIGPG 72
+K + + + + +++ + S K+ + L + +K A + G
Sbjct: 3 KKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNLGEYKEVKYKVAKIKDGVA 62
Query: 73 IMYTVVCTYLT---KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
I G V+ W +++ DG GW+ +
Sbjct: 63 IKIREEGQVQNIAYSGDEFTVLGTQGEWVKVKVEDG-EGWLATRYVD-------ISEGVG 114
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL K S ++ ++E G L + E +G+W + +TEG++K I
Sbjct: 115 YTNADKVNLRKDKSESSEVIEELEKGSSLLVLEDNGDWLKVKDGETEGYVKSSYI 169
>gi|297531392|ref|YP_003672667.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
gi|297254644|gb|ADI28090.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
Length = 815
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 78/193 (40%), Gaps = 21/193 (10%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
T+ +++ Y +DL + + L + I + + + +PL V++
Sbjct: 289 TNGQELWYRVDLGHVRGWVSEKVLTMSSTI-----SVPSGVSDTSSISGQPLTVSVSV-- 341
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSG 117
AN R P + VV T L KG + + ++ W ++ T+GW+++++++
Sbjct: 342 --ANVRQAPSLKAKVV-TQLKKGTKLNSLSSAKDASGALWYKVSLNGKTLGWVHETVVTK 398
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFG-Y 171
S S +K L+ +P + + ++ ++ +T+ + + +W
Sbjct: 399 SYLSPPASQGKQKQVTTANAALFAEPSLSAAVIERIAKNRTVTVLKTTEASPFDWVQVTS 458
Query: 172 NLDTEGWIKKQKI 184
GW+ ++
Sbjct: 459 ASGKTGWMPAFEV 471
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRSA 121
+ G Y V + + G V V+ E++N W +I + G GW S + +
Sbjct: 115 LKRGATDSYRAVGS-IPAGQQVNVIDEFQNAYGETWYRIE-YGGVTGWARADSFSNQPPS 172
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTE 176
+ R I + K +V + G +++I ++ +
Sbjct: 173 M-LVGKRAVIAANDIAMRKGASPYYPVVKTLSNGDVVSIMAEFTNSLGEQYVRVEWAGVK 231
Query: 177 GWIKKQKIW 185
GW+K ++I+
Sbjct: 232 GWVKTEQIY 240
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 21/174 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
++ +L+ L L P AL+ + P T+ + N R G Y +V
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSP-----TLMVAEHNALLRRGATDSYQIV- 54
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
++ G V+V+ +++N W +I + G GW S + S +
Sbjct: 55 ESISAGQQVKVIDKFQNAAGETWYRIE-YKGITGWARADDFSEA--HVSSAFPNVMFAKQ 111
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIKKQK 183
L + V + G + + + W GW +
Sbjct: 112 DSLLKRGATDSYRAVGSIPAGQQVNVIDEFQNAYGETWYRIEYGGVTGWARADS 165
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--IFEKKPLPRFVTIKA 62
AE L + + + L T A F + + S + + P +V +K
Sbjct: 422 AEPSLSAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMPAFEVNAPSYVYVKQ 481
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ R G Y + L + V+ EY W + +G GW+ +S S
Sbjct: 482 AGTPLRRGASSNYQSL-KTLAANERLAVLYEYHGWLNVETSNGVRGWVEESSTS 534
>gi|167762331|ref|ZP_02434458.1| hypothetical protein BACSTE_00684 [Bacteroides stercoris ATCC
43183]
gi|167699974|gb|EDS16553.1| hypothetical protein BACSTE_00684 [Bacteroides stercoris ATCC
43183]
Length = 400
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I S AN R+ P ++ L G+PV V++ + W +I+ D I W+++ +
Sbjct: 110 INVSVANMRVAPDFSSEMMTQSLM-GMPVRVLQR-DGWVRIQTPDNYIAWVHRVGVHPVT 167
Query: 120 SAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
++ WN+ + + +Y +P+ S V+ V G L G +
Sbjct: 168 EEEMAAWNKAEKIVVTAHYGFVYSEPNQTSQTVSDVVAGNRLKWEGSKGAFYKVTYPDGR 227
Query: 176 EGWIKKQ 182
G+I K
Sbjct: 228 RGYISKS 234
>gi|300854983|ref|YP_003779967.1| hypothetical protein CLJU_c18020 [Clostridium ljungdahlii DSM
13528]
gi|300435098|gb|ADK14865.1| hypothetical protein containing SH3 domains [Clostridium
ljungdahlii DSM 13528]
Length = 383
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
S AN R P T++ T + KG + ++ W Q+ ++G GWI + L
Sbjct: 261 TSYANLRANPSTDDTIL-TNVPKGTILNLMNYSNGWYQVT-YNGQTGWIWGNTLG----T 314
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWI 179
+ + + +N+ + IV + G G W EGW
Sbjct: 315 VPANQYVTISGVYQLNIRATSSSTAQIVGVLSQGQYAQKIGQTSDGSWYKIRINGIEGWS 374
Query: 180 KKQKI 184
+ +
Sbjct: 375 SSKYL 379
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
V + + N Y NL P I+ V G +L + S W G
Sbjct: 246 TPKFKVGGYAQVANVTSYANLRANPSTDDTILTNVPKGTILNLMNYSNGWYQVTYNGQTG 305
Query: 178 WIKKQKIWG 186
WI WG
Sbjct: 306 WI-----WG 309
>gi|229136801|ref|ZP_04265448.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228646662|gb|EEL02850.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 415
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R G G + + L++ + ++ ++W +I+ F+G G++ S L+
Sbjct: 105 VNTNILNVRSGAGTNFKTIGI-LSRNQTLTILDSTKDWYKIK-FNGRDGYVKGSYLTADD 162
Query: 120 SA------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGE 166
SA V+ N N +N+ P IV K+ G + + E +
Sbjct: 163 SARPNNIQGTTFKETVNENNIYKANVNVLNIRSIPSTAGNIVGKLCNGNPVNVLENMANG 222
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + ++K + I
Sbjct: 223 WSKINHNGKVAYVKTEFI 240
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 16/168 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + LA +A + K + N R GI ++
Sbjct: 6 MRRLSKYVTTVALA---STGIGIAADTAQAAENNK-------VNVDVLNIRATSGISGSI 55
Query: 78 VCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V L G PV V++ W +I +++G I ++ +S + I+ + N I +
Sbjct: 56 VGK-LYNGNPVNVLENLANGWSKI-NYNGKIAYVKTEFIS--TTHIIKSRTYRVNTNI-L 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ + + LTI + + +W +G++K +
Sbjct: 111 NVRSGAGTNFKTIGILSRNQTLTILDSTKDWYKIKFNGRDGYVKGSYL 158
>gi|56421689|ref|YP_149007.1| hypothetical protein GK3154 [Geobacillus kaustophilus HTA426]
gi|56381531|dbj|BAD77439.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 815
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ + + +PL V++ AN R P + VV T L KG + + +
Sbjct: 317 TMSVPSGVSDTSSVSGQPLTVSVSV----ANVRQAPSLKAKVV-TQLKKGTKLNSLSSAK 371
Query: 96 N-----WRQIRDFDGTIGWINKSLLSGK-RSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ W ++ T+GW++ ++++ S S +K L+ +P + + ++
Sbjct: 372 DASGALWYKVSLNGKTLGWVHGTVVTKSYLSPPASQGMQKQVTTANAALFAEPSLSAAVI 431
Query: 150 AKVEPGVLLTIRECSG----EWCFG-YNLDTEGWIK 180
++ +T+ + + +W GW+
Sbjct: 432 ERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMP 467
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 21/174 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
++ +L+ L L P AL+ + P T+ + N R G Y +V
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSP-----TLMVAEHNALLRRGATDSYQIV- 54
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
++ G V+V+ +++N W +I + G GW S + S +
Sbjct: 55 ESISAGQQVKVIDKFQNAAGETWYRIE-YKGITGWARADDFSEA--HVSSAFPNVMFAKQ 111
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIKKQK 183
L + V + G + + + W GW +
Sbjct: 112 DSLLRRGATDSYRSVGSIPAGQQVKVIDEFQNAYGETWYRIEYGGVTGWTRADS 165
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 46 KEIFEKKP----LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----EN 96
+ F +P + + I A+ R G Y VV L+ G V ++ E+ E
Sbjct: 163 ADSFSNQPPSMLVGKRAVIAANDITMRKGASPYYPVV-KTLSNGDVVSIIAEFTNSLGEQ 221
Query: 97 WRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ ++ + G GW+ + + + + N ++P + + VA V
Sbjct: 222 YVRVE-WAGVKGWVKTEQIYIPKQLPTLLPTFMNVVQSSP----VRHGASVHYRAVATVS 276
Query: 154 PGVLLTIRE---CSGE--WCFGYNLDTEGWIKKQKI 184
G + + + +G+ WC GW+ ++ +
Sbjct: 277 RGQSVKVIDLFVTNGQELWCRVDLGHVRGWVSEKVL 312
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--IFEKKPLPRFVTIKA 62
AE L + + + L T A F + + S + + P +V +K
Sbjct: 422 AEPSLSAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMPVFEVKAPSYVYVKQ 481
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ R G Y + L + V+ EY W + +G GW+ +S S
Sbjct: 482 AGTPLRRGASSNYQSL-KALAANERLAVLYEYHGWLNVETSNGVRGWVEESSTS 534
>gi|123435047|ref|XP_001308914.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890617|gb|EAX95984.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 289
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 15/120 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R GP +++ G V V+ +W Q+ + +G G+I LL +
Sbjct: 40 ANIRSGPSTSSSIIGA-AADGTQVTVIGHQNDWWQV-NRNGQTGYIKAELLHVR------ 91
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + I + + P V + ++TI + S W +GW+ +
Sbjct: 92 ---GKVDADIGLKIRSGPGTNYARVGGLPNNAVVTIYDVSSNWYKVD----QGWVCADYV 144
>gi|327325014|gb|EGE66824.1| lipoprotein A, RlpA family [Propionibacterium acnes HL103PA1]
Length = 368
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V T +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSA-SSNSGKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + + G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 217 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 274
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 275 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 334
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 335 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 364
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 173 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 232
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 SGQVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 275
>gi|313763688|gb|EFS35052.1| bacterial SH3 domain protein [Propionibacterium acnes HL013PA1]
Length = 345
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCF 169
E G W
Sbjct: 333 ARPTGEVHGNWVQ 345
>gi|254426180|ref|ZP_05039897.1| phage lysozyme, putative [Synechococcus sp. PCC 7335]
gi|196188603|gb|EDX83568.1| phage lysozyme, putative [Synechococcus sp. PCC 7335]
Length = 839
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+ N R GPG + V L V V E W QI GWI +
Sbjct: 499 YVSDPNPPLNVRSGPGTRFEKV-DTLANDSRVTVTGEDAGWLQITHPVN--GWIFE---- 551
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K ++ +NP N+ P +V K++ G + + + W +
Sbjct: 552 -KNTSKFLMRLTSDDNP-PTNVRSGPGQHFDVVHKLDNGTSIRVIDEKEGWLQL-AGPVD 608
Query: 177 GWIKKQKI 184
GWI ++ +
Sbjct: 609 GWISRKLV 616
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R + N R GPG + VV L G + V+ E E W Q+ GWI++ L+
Sbjct: 560 RLTSDDNPPTNVRSGPGQHFDVV-HKLDNGTSIRVIDEKEGWLQLAGP--VDGWISRKLV 616
Query: 116 -SGKRSAIVSPWNRKTNNPIYINLYKK 141
S R SP + Y++
Sbjct: 617 ISSSRGISASPAPASMSEAQKYEQYRQ 643
>gi|328757061|gb|EGF70677.1| bacterial SH3 domain protein [Propionibacterium acnes HL020PA1]
Length = 366
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNTGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 333 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|304405234|ref|ZP_07386894.1| NLP/P60 protein [Paenibacillus curdlanolyticus YK9]
gi|304346113|gb|EFM11947.1| NLP/P60 protein [Paenibacillus curdlanolyticus YK9]
Length = 348
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS--LLSGKRSA 121
N R P +V+ L +G + V+++ W +++D G IG+++ S LS S
Sbjct: 47 VNMRTQPSTAGSVI-RLLKQGESIVVLEQTNAYWYKVQDSRGAIGYVSTSSQYLSVTSSG 105
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFG-YNLDTEGWI 179
S N + L P + + + + + W G+I
Sbjct: 106 APSQGNTNGTIVATVTLRTSPSTSGSAIGYLHKNDQVQVLSAPNAYWYEVADQQGRRGYI 165
Query: 180 KKQK 183
Q
Sbjct: 166 SSQS 169
>gi|291561925|emb|CBL40731.1| Cell wall hydrolyses involved in spore germination
[butyrate-producing bacterium SS3/4]
Length = 333
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 16/175 (9%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+K++ K + + L+ P A S ++ + + + N R P
Sbjct: 12 SKKFLLKAAAAASVLFLSTALLTLPSFAAS----AYDNLAV---ANVTSEPLNMRTKPST 64
Query: 74 MYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKRSAIVSPWNR 128
+V Y G V+++ + W ++R GW+ L + A
Sbjct: 65 DGEIVGKCYRGAGG--TVLEKKDGWTKVR-SGKIEGWMCDKYLLFGTDIEPLAKELGLLS 121
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+N+ + P S I+ + G + S W + DT G+I Q
Sbjct: 122 AKITATTLNVREIPSTDSAILKQAAEGDSFPVLSESDGWTKVQLSADTNGYISSQ 176
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI-KKQKIWGI 187
+N+ KP IV K G T+ E W + EGW+ K ++G
Sbjct: 49 ANVTSEPLNMRTKPSTDGEIVGKCYRGAGGTVLEKKDGWTKVRSGKIEGWMCDKYLLFGT 108
Query: 188 Y 188
Sbjct: 109 D 109
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I A+ N R P ++ +G V+ E + W +++ T G+I+ S
Sbjct: 122 AKITATTLNVREIPSTDSAIL-KQAAEGDSFPVLSESDGWTKVQLSADTNGYISSQYASI 180
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
P L + S
Sbjct: 181 GP----VPAAAVDAKEESAALSASGNETSA 206
>gi|297531393|ref|YP_003672668.1| SH3 type 3 domain protein [Geobacillus sp. C56-T3]
gi|297254645|gb|ADI28091.1| SH3 type 3 domain protein [Geobacillus sp. C56-T3]
Length = 225
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGW 109
LP V + + A R G Y V+ TY G ++VV W + GW
Sbjct: 85 LPSVVYVAKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNVVLSSSLKGW 143
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CS 164
I+ +S SA+ S + +N+ K I+A V G + +
Sbjct: 144 IHSGDVS--TSAVSSDSTKHVIATAAVNIRKGATTSYPIIATVPKGTEMVYIQPFTNSKG 201
Query: 165 GEWCFGY-NLDTEGWIKKQ 182
+W + GW+ +
Sbjct: 202 EKWYNVQLSDGRRGWMAAE 220
>gi|225019818|ref|ZP_03709010.1| hypothetical protein CLOSTMETH_03771 [Clostridium methylpentosum
DSM 5476]
gi|224947378|gb|EEG28587.1| hypothetical protein CLOSTMETH_03771 [Clostridium methylpentosum
DSM 5476]
Length = 318
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 41 ALSHEKEIFEKKPLP--RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENW 97
+ + P P + N RI P +V + +G V V Y W
Sbjct: 165 STAPANGSINDTPTPAQSCGVVNCDLLNVRIAPYED-SVRLRQVARGNQVLVTGVYANGW 223
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVS------PWNRKTNNPIYINLYKKPDIQSIIVAK 151
Q+ D +G + + ++ + I S +N+ P + ++ +
Sbjct: 224 LQV-DIEGVVCCVAGQYINYDATGIPSLDPPGYVATEGIVTGNLVNVRSGPGTSNKVLFQ 282
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G L + + W L +GWI ++ +
Sbjct: 283 VAQGNSLNVYQEQSGWYKINCLHGDGWIDQRFV 315
>gi|46204532|ref|ZP_00209453.1| COG3103: SH3 domain protein [Magnetospirillum magnetotacticum MS-1]
Length = 278
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 14/139 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+VT A+ N R VV L KG + V W ++ +G GW++
Sbjct: 138 RYVT--AASLNLRASATTASAVV-ARLPKGTTLSVATTSGGWLKVT-ANGRTGWVSAQYT 193
Query: 116 S---------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSG 165
S + +NL S +VA++ G V+ + S
Sbjct: 194 STGAPSAPATPTPAPATPQAGTSYVTASSLNLRASASTSSKVVARLGRGTVVTHVGTASK 253
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 254 GWLKVTAGGRTGFVSTAYL 272
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 21/111 (18%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIV--------------------SPWNRKTN 131
E +WR++ GW+ + + R A + +
Sbjct: 82 DESGSWRRVT-SGQATGWVPAASIGPTRPAPIGTPPAPQPPASQPPAPQPSAPQQATRYV 140
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL S +VA++ G L++ SG W GW+ Q
Sbjct: 141 TAASLNLRASATTASAVVARLPKGTTLSVATTSGGWLKVTANGRTGWVSAQ 191
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++L S +VA++ G V+ + SG W + GW+ I
Sbjct: 50 TNAVVDLRAGAATGSAVVARIPHGATVVGAPGDESGSWRRVTSGQATGWVPAASI 104
>gi|270285075|ref|ZP_06194469.1| hypothetical protein CmurN_01448 [Chlamydia muridarum Nigg]
gi|270289099|ref|ZP_06195401.1| hypothetical protein CmurW_01513 [Chlamydia muridarum Weiss]
gi|301336472|ref|ZP_07224674.1| hypothetical protein CmurM_01515 [Chlamydia muridarum MopnTet14]
Length = 439
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 17/155 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + A A + A F P IK +R R+ P +
Sbjct: 2 LILALSCGENTCLCAADSPKAKVDASIGNGASFS----PFTGEIKGNRVRLRLAPHTDSS 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ L+KG + V+ E +++ + +G G++ ++ + +
Sbjct: 58 II-KELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFV-----------LDNVIEGEKV 105
Query: 137 NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
N+ +P + I+A++ G V+ T+ G+W
Sbjct: 106 NVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEI 140
>gi|313801206|gb|EFS42467.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA2]
gi|313810303|gb|EFS48021.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA1]
gi|314964673|gb|EFT08773.1| bacterial SH3 domain protein [Propionibacterium acnes HL082PA1]
gi|315096589|gb|EFT68565.1| bacterial SH3 domain protein [Propionibacterium acnes HL038PA1]
gi|315106670|gb|EFT78646.1| bacterial SH3 domain protein [Propionibacterium acnes HL030PA1]
gi|327331650|gb|EGE73388.1| lipoprotein A, RlpA family [Propionibacterium acnes HL097PA1]
gi|327447506|gb|EGE94160.1| bacterial SH3 domain protein [Propionibacterium acnes HL043PA1]
gi|327452635|gb|EGE99289.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
Length = 366
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 333 ARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|332982673|ref|YP_004464114.1| cell wall hydrolase/autolysin [Mahella australiensis 50-1 BON]
gi|332700351|gb|AEE97292.1| cell wall hydrolase/autolysin [Mahella australiensis 50-1 BON]
Length = 583
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
SRAN R + ++ T+G V ++ +I+ ++GT +++ S+ +A
Sbjct: 48 GSRANIRSAASLNSGIIGK-ATRGQRFTYVDTIGSFFKIQ-YNGTTAYLHNSVAKAISTA 105
Query: 122 IVSPWNRKTNNPI-----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
P +N+ Q +V ++ G + + SG W
Sbjct: 106 QPVPSRSSAQTGTVKVNTTLNVRSGAGTQYKVVGSLKNGTKVEVLSKSGSWYQIKYGSIT 165
Query: 177 GWIKKQKI 184
G++ +Q +
Sbjct: 166 GYVSEQYL 173
>gi|332308419|ref|YP_004436270.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175748|gb|AEE25002.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 459
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P TVV LT+G+ + NW Q R F T G+++ S L
Sbjct: 5 VSANLLNVRSLPSTSSTVVGQ-LTRGMVIVTTPVQYNWVQFR-FGSTFGFVSGSYLQK-- 60
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N +N+ + P + ++A V G + +G+W + +
Sbjct: 61 -VHDLSRLTGSVNTDLLNIRQAPSTSASVLATVALGASIKTLAVAGDWLEIEFNGHQAYA 119
Query: 180 KKQKIWGIYPG 190
+ + +Y
Sbjct: 120 FAKHVDLVYAD 130
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 5/126 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++ N R P +V+ T + G ++ + +W +I F+G + +
Sbjct: 70 SVNTDLLNIRQAPSTSASVLAT-VALGASIKTLAVAGDWLEIE-FNGHQAYAFAKHVDL- 126
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ P+ + I ++ L+ + WC G+
Sbjct: 127 --VYADNGYYANVTAGALNVRSAPNKHASIFGQLAANSLVWVEGKQQNWCQIRFNGNRGY 184
Query: 179 IKKQKI 184
+
Sbjct: 185 AASAYL 190
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 12/138 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEK------KPLPRFVTIKASRANSRIGP 71
+ + + I TLA+ I H+ F K + + A N R P
Sbjct: 89 LATVALGASIKTLAVAGDWLEIEFNGHQAYAFAKHVDLVYADNGYYANVTAGALNVRSAP 148
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR----SAIVSPWN 127
+ + L V V + +NW QIR F+G G+ + L + ++ +
Sbjct: 149 NK-HASIFGQLAANSLVWVEGKQQNWCQIR-FNGNRGYAASAYLQAAPEINDTHLLKEQD 206
Query: 128 RKTNNPIYINLYKKPDIQ 145
+ + + P
Sbjct: 207 HQDPRDDSLTHHLAPSSN 224
>gi|314927081|gb|EFS90912.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA3]
Length = 343
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 43/134 (32%), Gaps = 23/134 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 212 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 269
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 270 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 329
Query: 158 LT-IRECSGEWCFG 170
E G W
Sbjct: 330 ARPTGEVHGNWVQI 343
>gi|313816852|gb|EFS54566.1| bacterial SH3 domain protein [Propionibacterium acnes HL059PA1]
Length = 343
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 43/134 (32%), Gaps = 23/134 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 212 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 269
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 270 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 329
Query: 158 LT-IRECSGEWCFG 170
E G W
Sbjct: 330 ARPTGEVHGNWVQI 343
>gi|327452326|gb|EGE98980.1| bacterial SH3 domain protein [Propionibacterium acnes HL092PA1]
Length = 366
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 23/150 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW Q R G+ GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQSR-ATGSTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W + GW + + G
Sbjct: 333 ARPTGEVHGNWVQSRATGSTGWAYRTHLTG 362
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 49/161 (30%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W + GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQSRATGSTGWAYRTHLTG 273
>gi|314931401|gb|EFS95232.1| bacterial SH3 domain protein [Propionibacterium acnes HL067PA1]
Length = 355
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 45/143 (31%), Gaps = 23/143 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
T S N R P V+ L G V+V E + NW QIR +G GW ++ L+
Sbjct: 215 ATRTTSGLNMRTAPSPSGQVI-NQLASGAGVQVTGEVHGNWVQIR-ANGYTGWAYRTHLT 272
Query: 117 GKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVEPGVL 157
G A + + P +N+ P + + + G
Sbjct: 273 GNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTG 332
Query: 158 LT-IRECSGEWCFGYNLDTEGWI 179
E G W GW
Sbjct: 333 ARPTGEVHGNWVQIRANGYTGWA 355
>gi|148654567|ref|YP_001274772.1| SH3 type 3 domain-containing protein [Roseiflexus sp. RS-1]
gi|148566677|gb|ABQ88822.1| SH3, type 3 domain protein [Roseiflexus sp. RS-1]
Length = 510
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 62/176 (35%), Gaps = 19/176 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-------RANSRIGPGIMYTVVC 79
+ +A +AP L + + +P P V N R P V+
Sbjct: 219 FYAIAAEPTVAPALTPTATQPPATPEPSPTVVEATRELTGTATIAGNIRREPNREAEVLG 278
Query: 80 TYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSL------LSGKRSAIVSPWNRKTN 131
L G V +++ W ++ +G GW++++L L+ + RK
Sbjct: 279 R-LALGEVVTLIERSIDGEWYRVTTSEGLSGWVSRTLLVVDQNLAAQLPVATPTDLRKAA 337
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCF-GYNLDTEGWIKKQKI 184
N+ P ++ +++ ++ G + + + + W GW+ + +
Sbjct: 338 VFNGGNVRTSPSLRGLVIDQINAGESVFLLARNADSTWLKIINERKMTGWVSRTLL 393
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA---SRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
P + +P + A + N R P + V+ + V+++
Sbjct: 412 TPLPATVAALPPPPTPNATVPPATGLTAIVFNGGNVRAAPNLQGQVLDQINAR-ETVQLL 470
Query: 92 KEY--ENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ NW +I + G GW+N++LL+
Sbjct: 471 SKTPDGNWYRITNVRGVTGWVNRTLLTVDPDV 502
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 38/164 (23%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS---- 116
+ N R P + V+ + G V ++ + W +I + GW++++LL+
Sbjct: 340 NGGNVRTSPSLRGLVI-DQINAGESVFLLARNADSTWLKIINERKMTGWVSRTLLTIAPD 398
Query: 117 --------------------------GKRSAIVSPWNRKTNNP-IYINLYKKPDIQSIIV 149
+A V P T N+ P++Q ++
Sbjct: 399 DLRRLPVSNETVPTPLPATVAALPPPPTPNATVPPATGLTAIVFNGGNVRAAPNLQGQVL 458
Query: 150 AKVEPGVLLTIREC--SGEWCFGY-NLDTEGWIKKQKIWGIYPG 190
++ + + G W GW+ + + + P
Sbjct: 459 DQINARETVQLLSKTPDGNWYRITNVRGVTGWVNRTLL-TVDPD 501
>gi|52144532|ref|YP_082296.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|51978001|gb|AAU19551.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
Length = 410
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + FVT N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAET---------FVT--TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|327440030|dbj|BAK16395.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 630
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 63/173 (36%), Gaps = 8/173 (4%)
Query: 16 KYMPK--ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
KYMPK + + +A LAL + + + V++ N R P
Sbjct: 183 KYMPKGSVTRAQFASFIARAKSDEFRLALPEHLDSVDPTQVIGLVSVTTDGLNVRTKPTT 242
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKT 130
V+ + G + V NW ++ + G G+I L + SAI P +
Sbjct: 243 SSAVIGR-VNTGGKLSVYAVEGNWLKVS-YQGYYGYISKSYAKFLEQEGSAI-GPSIKAV 299
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
INLY KP S + ++ G L++ + + G+I K
Sbjct: 300 KTNTIINLYYKPTSSSKKIKQISAGSTLSVYKEIDGYYLTTVGGIPGYIVKNS 352
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 23/69 (33%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S +V+ +N+ K S + K+ G ++ + G W
Sbjct: 370 SDNNDPVVTSGTTGKVTVASLNMRKSASGSSATIKKLSKGSVIAVHSIDGYWAKVTAGKD 429
Query: 176 EGWIKKQKI 184
G++ K I
Sbjct: 430 TGYVHKSYI 438
>gi|123437062|ref|XP_001309331.1| NLP/P60 family protein [Trichomonas vaginalis G3]
gi|121891053|gb|EAX96401.1| NLP/P60 family protein, putative [Trichomonas vaginalis G3]
Length = 294
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 14/120 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG Y V+ + G + V NW Q+ ++G G++ L
Sbjct: 43 VNIRSGPGTGYGVI-AAVADGTTLSVTGHSSNWWQVS-YNGQTGYVISDYL--------K 92
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P +VA + G +TI +G+W +G++ Q I
Sbjct: 93 VSGSVSGTGSGLNVRAGPGTNYAVVAGLSDGTSVTITGINGDWYHIS----QGYVYSQYI 148
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I +N+ P ++A V G L++ S W G++ +
Sbjct: 38 GSGIGVNIRSGPGTGYGVIAAVADGTTLSVTGHSSNWWQVSYNGQTGYVISDYL 91
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y VV L+ G V + +W I + G++ +S
Sbjct: 105 NVRAGPGTNYAVV-AGLSDGTSVTITGINGDWYHI-----SQGYVYSQYIS 149
>gi|319654333|ref|ZP_08008421.1| hypothetical protein HMPREF1013_05041 [Bacillus sp. 2_A_57_CT2]
gi|317394033|gb|EFV74783.1| hypothetical protein HMPREF1013_05041 [Bacillus sp. 2_A_57_CT2]
Length = 367
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSG 117
T+ A+ N R GPG Y + + L +G ++ ++ W +I +++G G+++ +
Sbjct: 49 TVDATSLNVRSGPGTNYNRIGS-LPQGSSIQAIERLASGWYKI-NYNGKTGYVSGQYVK- 105
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTE 176
+ + +N+ K P + V ++ G LL++ W +
Sbjct: 106 ------TNEKLYRVDATSLNVRKGPGLNYSSVGLLKNGSLLSVIHKESNGWYKISYNGST 159
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 160 GYVSGDYV 167
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ A+ N R GPG+ Y+ V L + KE W +I ++G+ G+++ ++
Sbjct: 113 VDATSLNVRKGPGLNYSSVGLLKNGSLLSVIHKESNGWYKIS-YNGSTGYVSGDYVTA 169
>gi|254976555|ref|ZP_05273027.1| hypothetical protein CdifQC_14631 [Clostridium difficile QCD-66c26]
gi|255093939|ref|ZP_05323417.1| hypothetical protein CdifC_14946 [Clostridium difficile CIP 107932]
gi|255315691|ref|ZP_05357274.1| hypothetical protein CdifQCD-7_15104 [Clostridium difficile
QCD-76w55]
gi|255518352|ref|ZP_05386028.1| hypothetical protein CdifQCD-_14633 [Clostridium difficile
QCD-97b34]
gi|255651470|ref|ZP_05398372.1| hypothetical protein CdifQCD_14888 [Clostridium difficile
QCD-37x79]
gi|306521294|ref|ZP_07407641.1| hypothetical protein CdifQ_17171 [Clostridium difficile QCD-32g58]
Length = 283
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 23 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 78
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+NL + I S I+ + + + + G+W D G++
Sbjct: 79 ---------SNLNLREDKSITSNIITVIPEKSRVEVLQVDGDWSKIVYDDKIGYV 124
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL S I+ + G + + + +W EG++ K +
Sbjct: 23 VNLRSAKSTNSSIITVIPQGAKMEVLDEEDDWIKVMYNSQEGYVYKDLV 71
>gi|314986414|gb|EFT30506.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA2]
gi|315083421|gb|EFT55397.1| bacterial SH3 domain protein [Propionibacterium acnes HL027PA2]
Length = 256
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNTGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 26/144 (18%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCF 169
++ ++ G + + E G W
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQ 256
>gi|196037634|ref|ZP_03104945.1| enterotoxin [Bacillus cereus NVH0597-99]
gi|196031876|gb|EDX70472.1| enterotoxin [Bacillus cereus NVH0597-99]
Length = 414
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|225862770|ref|YP_002748148.1| hypothetical protein BCA_0857 [Bacillus cereus 03BB102]
gi|225786160|gb|ACO26377.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 402
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|196046694|ref|ZP_03113917.1| enterotoxin [Bacillus cereus 03BB108]
gi|196022406|gb|EDX61090.1| enterotoxin [Bacillus cereus 03BB108]
Length = 408
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|49481709|ref|YP_035050.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49333265|gb|AAT63911.1| conserved hypothetical protein, possible enterotoxin/cell
wall-binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 414
Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|314976803|gb|EFT20898.1| bacterial SH3 domain protein [Propionibacterium acnes HL045PA1]
Length = 257
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 26/145 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFG 170
++ ++ G + + E G W
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQI 257
>gi|229826216|ref|ZP_04452285.1| hypothetical protein GCWU000182_01588 [Abiotrophia defectiva ATCC
49176]
gi|229789086|gb|EEP25200.1| hypothetical protein GCWU000182_01588 [Abiotrophia defectiva ATCC
49176]
Length = 487
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 11/136 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++I N R PG ++ L KG +++K +W +I G+I L+
Sbjct: 145 ISIADPYVNIRKKPGEGNEIIGK-LYKGSKCDILKTKGDWVKIE-SGNAKGYIKAEYLAR 202
Query: 118 KRSAIVSPWNRKTNNPI----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
A T +N+ + + +S I ++ G L + + G+W
Sbjct: 203 GFDAEKLIDEYGTKVAEVKVETLNVRFEDNTESRIATQIPMGEKLLVLKKKGDWYEVAIN 262
Query: 174 D-----TEGWIKKQKI 184
D GW+ K +
Sbjct: 263 DGDEDRFTGWVSKDFV 278
>gi|314967418|gb|EFT11517.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA1]
Length = 256
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASR 64
++ PK T+A+ +AP + S + +
Sbjct: 3 LMARGSHTVIRPKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTAD 56
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R V+ +G V+V E W + +GT GWI + L+ + V
Sbjct: 57 VNVRSASSNSGRVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPV 114
Query: 124 ----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
P + +N+ ++ E G + I G W GW
Sbjct: 115 HFGSDPLPDTMIAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGW 174
Query: 179 IKKQKI 184
I + +
Sbjct: 175 IYGRYL 180
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 26/144 (18%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 116 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 172
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 173 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 232
Query: 147 IIVAKVEPGVLLTI-RECSGEWCF 169
++ ++ G + + E G W
Sbjct: 233 QVINQLASGAGVQVTGEVHGNWVQ 256
>gi|260684528|ref|YP_003215813.1| hypothetical protein CD196_2796 [Clostridium difficile CD196]
gi|260688186|ref|YP_003219320.1| hypothetical protein CDR20291_2843 [Clostridium difficile R20291]
gi|260210691|emb|CBA65475.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214203|emb|CBE06463.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 289
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R +++ + +G +EV+ E ++W ++ ++ G++ K L+S A
Sbjct: 29 VNLRSAKSTNSSIITV-IPQGAKMEVLDEEDDWIKVM-YNSQEGYVYKDLVSVSEYAW-- 84
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+NL + I S I+ + + + + G+W D G++
Sbjct: 85 ---------SNLNLREDKSITSNIITVIPEKSRVEVLQVDGDWSKIVYDDKIGYV 130
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI L K + +NL S I+ + G + + + +
Sbjct: 2 RGWICVKLT--KLNIKKYRAPIYKYALANVNLRSAKSTNSSIITVIPQGAKMEVLDEEDD 59
Query: 167 WCFGYNLDTEGWIKKQKI 184
W EG++ K +
Sbjct: 60 WIKVMYNSQEGYVYKDLV 77
>gi|314960709|gb|EFT04810.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA2]
Length = 274
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
++ ++ G + + E G W GW + + G
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|222529871|ref|YP_002573753.1| NLP/P60 protein [Caldicellulosiruptor bescii DSM 6725]
gi|222456718|gb|ACM60980.1| NLP/P60 protein [Caldicellulosiruptor bescii DSM 6725]
Length = 319
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 33/179 (18%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++I + + F+ A + A S + S N R P +
Sbjct: 1 MNLKSLIAIILGIFLMFFSAKVFAQSAQA---------------KSTINIRSAPSTSSKI 45
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKTNN-- 132
+ + KG +V+ W +I +DG +G++ ++ + KRSA+ +
Sbjct: 46 LGVF-PKGFKAQVLSNAGGWVKIS-YDGIVGYVKSDYITITNEKRSAVSNTSRASVAKTA 103
Query: 133 ---------PIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 104 AKAAQATVLKDNARLRSDMSTTSKVLKTLKNGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S I+ G + +G W G++K I
Sbjct: 25 QSAQAKSTINIRSAPSTSSKILGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
>gi|254421633|ref|ZP_05035351.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196189122|gb|EDX84086.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 226
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 60/185 (32%), Gaps = 24/185 (12%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-------RFV------TIKASRAN 66
K + L+ AP + +H ++ P R+ I N
Sbjct: 15 KAVSAGLLLAATTLVGSAPAASANHHLALYTPIEEPAAVDWTTRYAGEVPFSNISDGPVN 74
Query: 67 SRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------KR 119
R GPG V+ +G +E +W + DGT GW+ S +G
Sbjct: 75 VRTGPGTDRPVIRQLAHREGGIIEGCNTTLDWCLLGFGDGTNGWVKMSFFAGFADQPDWM 134
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDT-- 175
S N IN+ P + S I + P I+ C+ +WC T
Sbjct: 135 SRYSPEAYYVNNTHGAINVRNAPFLTSTIQTTLAPNEGGYIQTCNVDLDWCQITLNGTEQ 194
Query: 176 EGWIK 180
GW+
Sbjct: 195 TGWVY 199
>gi|206977243|ref|ZP_03238141.1| enterotoxin [Bacillus cereus H3081.97]
gi|206744559|gb|EDZ55968.1| enterotoxin [Bacillus cereus H3081.97]
Length = 425
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + FVT N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAET---------FVT--TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|217958385|ref|YP_002336933.1| enterotoxin [Bacillus cereus AH187]
gi|217065803|gb|ACJ80053.1| enterotoxin [Bacillus cereus AH187]
Length = 426
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + FVT N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAET---------FVT--TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|109900497|ref|YP_663752.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
gi|109702778|gb|ABG42698.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
Length = 459
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P +V LT+G+ + W Q R F GT G+++ L R
Sbjct: 5 VSADVLNVRSLPSTTSAIVGQ-LTRGMVMVTTPMQHGWVQFR-FGGTFGFVSGHYLQAVR 62
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
T N +N+ ++P + ++A V G + G+W + +
Sbjct: 63 D---LTRLTGTVNTQLLNIRQEPHAGATVLASVALGASIKTLAVVGDWLEVEFNGHQAYT 119
Query: 180 KKQKIWGIYPG 190
+ + +Y
Sbjct: 120 FAKHVDLVYAD 130
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ N R P TV+ + G ++ + +W ++ F+G +++ K
Sbjct: 70 TVNTQLLNIRQEPHAGATVL-ASVALGASIKTLAVVGDWLEVE-FNG-----HQAYTFAK 122
Query: 119 RSAIVSPWNR--KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+V N + +N+ P Q+ I ++ L+ + W
Sbjct: 123 HVDLVYADNGYYASVTASALNVRSAPHHQASIFGQLAANSLVWVEGDQQTWSQIRFNGNR 182
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 183 GYVASTYL 190
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEK------KPLPRFVTIKASRANSRIGP 71
+ + + I TLA+ + H+ F K + ++ AS N R P
Sbjct: 89 LASVALGASIKTLAVVGDWLEVEFNGHQAYTFAKHVDLVYADNGYYASVTASALNVRSAP 148
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
++ L V V + + W QIR F+G G++ + L A
Sbjct: 149 HHQASIFGQ-LAANSLVWVEGDQQTWSQIR-FNGNRGYVASTYLQVAPVA-------DDG 199
Query: 132 NPIYINLYKKP 142
P N ++ P
Sbjct: 200 TPAKQNDHQDP 210
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P S IV ++ G+++ W T G++ +
Sbjct: 3 DAVSADVLNVRSLPSTTSAIVGQLTRGMVMVTTPMQHGWVQFRFGGTFGFVSGHYL 58
>gi|210620556|ref|ZP_03292104.1| hypothetical protein CLOHIR_00047 [Clostridium hiranonis DSM 13275]
gi|210155270|gb|EEA86276.1| hypothetical protein CLOHIR_00047 [Clostridium hiranonis DSM 13275]
Length = 302
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 51/162 (31%), Gaps = 11/162 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-- 83
++ T + I ++ + + + A + G + V
Sbjct: 1 MVATGTVLVSADEIDDINSVPDTETGITIDEYKESPYKVATVKDGKSVNVRVDGNTKRVA 60
Query: 84 -KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G +V W + D + WI ++ + +NL
Sbjct: 61 GEGEQFKVKGIQGEWVNVEDGE-DDAWIASEYVAISEGVAFT-------TASTLNLRAAD 112
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S ++ +++ G L + + G+W N EG++ +
Sbjct: 113 NTSSEVLEELDKGSALVVVKQEGDWIQVRNQGKEGYVHADYV 154
>gi|254725794|ref|ZP_05187576.1| hypothetical protein BantA1_25591 [Bacillus anthracis str. A1055]
Length = 386
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W +++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVQVPYLTGKAP 147
>gi|42779963|ref|NP_977210.1| hypothetical protein BCE_0887 [Bacillus cereus ATCC 10987]
gi|42735881|gb|AAS39818.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 420
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|313820868|gb|EFS58582.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA1]
Length = 254
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 26/145 (17%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCFG 170
++ ++ G + + E G W
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQI 254
>gi|254757184|ref|ZP_05209212.1| hypothetical protein BantA9_02624 [Bacillus anthracis str.
Australia 94]
Length = 404
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|30260938|ref|NP_843315.1| hypothetical protein BA_0796 [Bacillus anthracis str. Ames]
gi|47526082|ref|YP_017431.1| hypothetical protein GBAA_0796 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183781|ref|YP_027033.1| hypothetical protein BAS0757 [Bacillus anthracis str. Sterne]
gi|165873153|ref|ZP_02217768.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167635999|ref|ZP_02394306.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641945|ref|ZP_02400181.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170689588|ref|ZP_02880773.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170709267|ref|ZP_02899686.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177655727|ref|ZP_02937025.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568861|ref|ZP_03021764.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227816333|ref|YP_002816342.1| hypothetical protein BAMEG_3762 [Bacillus anthracis str. CDC 684]
gi|229601248|ref|YP_002865380.1| hypothetical protein BAA_0904 [Bacillus anthracis str. A0248]
gi|254683006|ref|ZP_05146867.1| hypothetical protein BantC_04030 [Bacillus anthracis str.
CNEVA-9066]
gi|254735101|ref|ZP_05192812.1| hypothetical protein BantWNA_08017 [Bacillus anthracis str. Western
North America USA6153]
gi|254739931|ref|ZP_05197623.1| hypothetical protein BantKB_02739 [Bacillus anthracis str. Kruger
B]
gi|254753270|ref|ZP_05205306.1| hypothetical protein BantV_12413 [Bacillus anthracis str. Vollum]
gi|30254387|gb|AAP24801.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47501230|gb|AAT29906.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177708|gb|AAT53084.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164711101|gb|EDR16663.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510107|gb|EDR85517.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167528671|gb|EDR91431.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170125812|gb|EDS94720.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170666466|gb|EDT17244.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172080008|gb|EDT65109.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560098|gb|EDV14080.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227003197|gb|ACP12940.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265656|gb|ACQ47293.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 386
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|296501535|ref|YP_003663235.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296322587|gb|ADH05515.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 422
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K++ V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|218902009|ref|YP_002449843.1| enterotoxin [Bacillus cereus AH820]
gi|218536705|gb|ACK89103.1| enterotoxin [Bacillus cereus AH820]
Length = 410
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|328480055|gb|EGF49057.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus MTCC
5462]
Length = 203
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ +W Q+R IGW+ L+ +A S N P+ + Y D + +
Sbjct: 2 IGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQPVNVGEYASQDAKQ--LG 59
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + G+W +T WI +
Sbjct: 60 TLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 93
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 27/180 (15%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ L + I +A + A + K +P N
Sbjct: 6 NSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP-----------VNVGEYASQD 54
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNR---- 128
+ T L G V+VV + +W QI ++ T WI S L+G+ + + P
Sbjct: 55 AKQLGT-LNAGDSVKVVYQEGDWTQI-AYNNTAAWITSSSVQLTGQTTNLAQPAQANLTQ 112
Query: 129 -------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
K NL I + V K++ G LT+ + +W G++
Sbjct: 113 AKSGAALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVTKQQDDWYQVTALDGKSGYVA 172
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GI V L KG + V K+ ++W Q+ DG G++ ++ +
Sbjct: 128 NLRNAAGINAPSV-EKLDKGTELTVTKQQDDWYQVTALDGKSGYVASWTVTAPNNGQTQK 186
Query: 126 WNRKTNNPIY 135
R P
Sbjct: 187 RQRNYPKPRL 196
>gi|327325753|gb|EGE67547.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA3]
Length = 253
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNTG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 26/144 (18%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCF 169
++ ++ G + + E G W
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQ 253
>gi|160931729|ref|ZP_02079123.1| hypothetical protein CLOLEP_00561 [Clostridium leptum DSM 753]
gi|156869374|gb|EDO62746.1| hypothetical protein CLOLEP_00561 [Clostridium leptum DSM 753]
Length = 436
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 5/127 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKR- 119
A N R GPG Y VV T + V+V+K EN W QI G +GW +
Sbjct: 236 ADVLNVRSGPGTDYPVVYQISTGNM-VDVLKISENGWLQINCLHG-VGWCAAQYIQWSPF 293
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ + ++ G ++ + SG+W L GW
Sbjct: 294 ESQQPPIGIGRCTADVLNVRTGSGLDYPAAFQLSQGNMVDVLTASGQWLQINCLLGSGWC 353
Query: 180 KKQKI-W 185
Q I W
Sbjct: 354 ASQYIDW 360
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A N R G G+ Y L++G V+V+ W QI G+ GW + R+
Sbjct: 306 TADVLNVRTGSGLDYPAAFQ-LSQGNMVDVLTASGQWLQINCLLGS-GWCASQYIDWFRT 363
Query: 121 AI-VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGW 178
+ V +N+ P ++ + G ++ + E +G W L GW
Sbjct: 364 NLQVPAIGVGKCTADVLNIRSGPATDLSVLFTISEGNMVDVLEDNGRGWLRIRCLLGTGW 423
Query: 179 IKKQKI-W 185
Q I W
Sbjct: 424 CSAQYIDW 431
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKR 119
A N R GP +V+ T + V+V+++ W +IR GT GW + + R
Sbjct: 376 TADVLNIRSGPATDLSVLFTISEGNM-VDVLEDNGRGWLRIRCLLGT-GWCSAQYIDWSR 433
Query: 120 S 120
Sbjct: 434 H 434
>gi|326938561|gb|AEA14457.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 421
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKDTYYV----------TANVLNVRAS 98
Query: 142 PDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K++ V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|315104749|gb|EFT76725.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA2]
Length = 256
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSA-SSNS 63
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V E W + +GT GWI + L+ + V P
Sbjct: 64 GKVLTVAARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + + G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 28/147 (19%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V+V W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQVTGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDI 144
GWI L+ ++A + + +N+ P
Sbjct: 170 GWIYGRYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSP 229
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFG 170
++ ++ G + + E G W
Sbjct: 230 SGQVINQLASGAGVQVTGEVHGNWVQI 256
>gi|196036564|ref|ZP_03103958.1| enterotoxin [Bacillus cereus W]
gi|195990764|gb|EDX54738.1| enterotoxin [Bacillus cereus W]
Length = 410
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|330444677|ref|YP_004377663.1| hypothetical protein G5S_1043 [Chlamydophila pecorum E58]
gi|328807787|gb|AEB41960.1| conserved hypothetical protein [Chlamydophila pecorum E58]
Length = 408
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 21/157 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT-------IKASRANSRIGPGIMYTVVC 79
+ LA+ +P+ + P+ V+ IK R R+ P I T++
Sbjct: 8 MLLLALGSVSSPVSISAFAASSQPPSPVKGCVSFSSFTGEIKGDRVRMRLAPHIDSTII- 66
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+KG V VV E + + I G G++ ++ + +N+
Sbjct: 67 KELSKGDLVAVVGENKEYYIITAPQGLKGYVFRTFV-----------LDNVIEGEQVNVR 115
Query: 140 KKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLD 174
+P S ++ ++ G V T + G+W D
Sbjct: 116 LEPSTSSPVLIRLTRGTTVHATSEQSHGKWLEISIPD 152
>gi|324324840|gb|ADY20100.1| hypothetical protein YBT020_04270 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 380
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ + V+ T + W ++ + G P
Sbjct: 99 ANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|218231464|ref|YP_002365584.1| enterotoxin [Bacillus cereus B4264]
gi|218159421|gb|ACK59413.1| enterotoxin [Bacillus cereus B4264]
Length = 422
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 23/169 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + + I N R P VV
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETIVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V V+ W +++ G +I+ +N+
Sbjct: 50 L-DGYKVNVLHTENGWSKVQLNSGKEAFISADYTKDTYYV----------TANVLNVRAG 98
Query: 142 PDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K++ V+ T + +W ++ + G P
Sbjct: 99 ANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAP 147
>gi|313773003|gb|EFS38969.1| bacterial SH3 domain protein [Propionibacterium acnes HL074PA1]
gi|313830993|gb|EFS68707.1| bacterial SH3 domain protein [Propionibacterium acnes HL007PA1]
gi|314973684|gb|EFT17780.1| bacterial SH3 domain protein [Propionibacterium acnes HL053PA1]
gi|327327099|gb|EGE68879.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA2]
Length = 253
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 64
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 65 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ E G + I G W GWI + +
Sbjct: 123 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 26/144 (18%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F PLP + I A N R V T +G V++ W + +G
Sbjct: 113 FGSDPLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVS-VNGKS 169
Query: 108 GWINKSLLS---------------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
GWI L+ + + N T +N+ P
Sbjct: 170 GWIYGRYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSG 229
Query: 147 IIVAKVEPGVLLTI-RECSGEWCF 169
++ ++ G + + E G W
Sbjct: 230 QVINQLASGAGVQVTGEVHGNWVQ 253
>gi|49188070|ref|YP_031323.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. Sterne]
gi|165870010|ref|ZP_02214667.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. A0488]
gi|190567764|ref|ZP_03020676.1| NlpC/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|227817995|ref|YP_002818004.1| putative cell wall hydrolase [Bacillus anthracis str. CDC 684]
gi|229602830|ref|YP_002869451.1| NlpC/P60 family protein [Bacillus anthracis str. A0248]
gi|254737039|ref|ZP_05194744.1| putative cell wall hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744366|ref|ZP_05202046.1| putative cell wall hydrolase [Bacillus anthracis str. Kruger B]
gi|254755668|ref|ZP_05207701.1| putative cell wall hydrolase [Bacillus anthracis str. Vollum]
gi|254759599|ref|ZP_05211624.1| putative cell wall hydrolase [Bacillus anthracis str. Australia 94]
gi|49181997|gb|AAT57373.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. Sterne]
gi|164714333|gb|EDR19853.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. A0488]
gi|190561180|gb|EDV15153.1| NlpC/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|229267238|gb|ACQ48875.1| NlpC/P60 family protein [Bacillus anthracis str. A0248]
Length = 341
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 54 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 111
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 112 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 171
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 172 WSKINYNGQTGYIGTRYL 189
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 18/104 (17%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSA-----------------IVSPWNRKTNNPIYINL 138
+W +I ++ G +++K ++ S+ V N + +
Sbjct: 3 DWFKI-NYAGQTAYVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRV 61
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P ++ V G L + G W G++ +
Sbjct: 62 RTGPATYHSVIGGVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSE 105
>gi|65317204|ref|ZP_00390163.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 341
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ ++ G G+++ + +
Sbjct: 54 VNATSLRVRTGPATYHSVIGGVLN-GTTLNVIGSEGSWFKV-NYQGKTGYVSSEFMKFVK 111
Query: 120 SAIVSPWNRKTN-------------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+P K N +N+ I+ + G + + +
Sbjct: 112 GGTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSG 171
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 172 WSKINYNGQTGYIGTRYL 189
>gi|229016053|ref|ZP_04173007.1| Peptidase, M23/M37 [Bacillus cereus AH1273]
gi|229022275|ref|ZP_04178816.1| Peptidase, M23/M37 [Bacillus cereus AH1272]
gi|228739014|gb|EEL89469.1| Peptidase, M23/M37 [Bacillus cereus AH1272]
gi|228745202|gb|EEL95250.1| Peptidase, M23/M37 [Bacillus cereus AH1273]
Length = 386
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P +++ L G + + E +W +I +G IG++ K+ +S
Sbjct: 110 VNANALNVRSEPNTESSIL-DILPNGQFITIQGEQGDWYKI-LHNGQIGYVQKNFVSNGF 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V T +N+ S ++ ++ G + + E G W
Sbjct: 168 TPLVKGVAVQGSPSYTVATPKLNVRSNASTSSSLLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + G+I K + K++ V N+ N +N+ +
Sbjct: 64 IRFNSPVTILETTQDWYKVS-VNNKTGYIKKDAILFKKN--VQSKNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKNFV 163
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L++ S I+ + +TI E + +W + G+IKK I
Sbjct: 46 DNVALHQNNHADSAIIDNIRFNSPVTILETTQDWYKVSVNNKTGYIKKDAI 96
>gi|255527504|ref|ZP_05394373.1| CHAP domain containing protein [Clostridium carboxidivorans P7]
gi|255508809|gb|EET85180.1| CHAP domain containing protein [Clostridium carboxidivorans P7]
Length = 437
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 55/142 (38%), Gaps = 20/142 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ ++S N R P V+ + L G ++++ NW ++ + +GT+G+++ +S
Sbjct: 299 LSNQSSYLNLRNNPSGN--VIGS-LPSGTKLQILGTSGNWYKV-NSNGTVGYVSSDYVSI 354
Query: 118 KRSAIVSPWNRKTNNP---------------IYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ V+ P +NL P IV+++ G + I
Sbjct: 355 SSGSTVTTTAAANPQPQASGKVGTVTLSNKNSTLNLRSAPWTG-RIVSELAYGSKVQILS 413
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
+G W G++ I
Sbjct: 414 SNGRWYKVQAGSAVGFVHSDYI 435
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 22/122 (18%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------------GKRSAIVSPWNRK 129
L KG V VV +W +I+ ++ + G+++ +S +A V+
Sbjct: 234 LKKGSSVNVVAVSGDWYKIK-YNSSYGYVSSKYISLGSSQPVVNNSNTTSTAAVTNLTSN 292
Query: 130 T-------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N Y+NL P ++ + G L I SG W + T G++
Sbjct: 293 KFGVVNLSNQSSYLNLRNNPSGN--VIGSLPSGTKLQILGTSGNWYKVNSNGTVGYVSSD 350
Query: 183 KI 184
+
Sbjct: 351 YV 352
>gi|83589381|ref|YP_429390.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
gi|83572295|gb|ABC18847.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
Length = 657
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 39/164 (23%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---L 114
V I S N R GPG Y V+ L + V+++ + W Q++ DG GW++ S +
Sbjct: 160 VRITGSYVNVRTGPGTSYGVI-DVLPRDTLVQLLATGDGWYQVQLPDGRQGWVSASYSEV 218
Query: 115 LSGKRSAIVS----------------------------------PWNRKTNNPIYINLYK 140
L G + P + +
Sbjct: 219 LQGNNQPQDTNPPGNNQPGNGQSPGNNPSPGNNQPGNEEPPSGQPLGTAIIGNKPVAILA 278
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQK 183
P+ V G L I + G+W GW+
Sbjct: 279 GPNPVEKQVGMAPAGSRLPIWQQQGDWWLVELDNGLRGWLASSL 322
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
SP + Y+N+ P ++ + L+ + W +GW+
Sbjct: 155 SPAGQVRITGSYVNVRTGPGTSYGVIDVLPRDTLVQLLATGDGWYQVQLPDGRQGWVSAS 214
>gi|28378624|ref|NP_785516.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254556839|ref|YP_003063256.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300768152|ref|ZP_07078057.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180780|ref|YP_003924908.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|28271460|emb|CAD64365.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254045766|gb|ACT62559.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300494216|gb|EFK29379.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046271|gb|ADN98814.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 282
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ + N R GPG+ Y + +KG V ++K NW +R D GWI L++
Sbjct: 34 ATVNIANVNIRSGPGMSYAIE-DATSKGTKVHIMKRKNNWLYVRYADHKFGWIASWLVNE 92
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
S + + + D +
Sbjct: 93 HNSQLTKTTKISEATIVLDPGHGGSDSGA 121
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++V+K++ WRQI T+ I L+ G +++ N T N +N+ P +
Sbjct: 1 MQVLKQF--WRQI-----TVTVIFIGLVIGF-VVLLATNNTATVNIANVNIRSGPGMSYA 52
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
I G + I + W + D + GWI
Sbjct: 53 IEDATSKGTKVHIMKRKNNWLYVRYADHKFGWIA 86
>gi|329960778|ref|ZP_08299084.1| NlpC/P60 family protein [Bacteroides fluxus YIT 12057]
gi|328532379|gb|EGF59180.1| NlpC/P60 family protein [Bacteroides fluxus YIT 12057]
Length = 401
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S AN R+ P ++ L G+P+ V++ W +I+ D I W++ +
Sbjct: 110 VNVSVANLRVDPDFSSEMMTQGLM-GMPIRVLQR-NGWYRIQTPDNYIAWVHSVGIHPVT 167
Query: 120 SAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
A ++ WN + + +Y +PD S V+ V G L G +
Sbjct: 168 KAELTAWNNAEKIVVTSHYGFVYSRPDQNSQTVSDVVAGNRLKWEGTKGAYYKVTYPDGR 227
Query: 176 EGWIKKQ 182
G+I K
Sbjct: 228 RGYISKS 234
>gi|255525125|ref|ZP_05392069.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296188090|ref|ZP_06856482.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
gi|255511179|gb|EET87475.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296047216|gb|EFG86658.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
Length = 388
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
W ++ ++G GW+ LL ++I S N +N+ P + IV +
Sbjct: 298 NGWYLVK-YNGQSGWVWGDLL----TSIPSGKYVAIKNVYQLNIRSNPSTSASIVGILGQ 352
Query: 155 GVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
+ + G W +G+ + +
Sbjct: 353 NQYAEVLDYSKDGNWIKISINGVQGYASRSYL 384
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + S + + T P + ++ + G +L + S W
Sbjct: 246 STTPTQPSVTTGMFAQVTKVTNSAYFNANPSDGAALLGTIPKGTVLYLNNYSNGWYLVKY 305
Query: 173 LDTEGWIKKQKIWG 186
GW+ WG
Sbjct: 306 NGQSGWV-----WG 314
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 50 EKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGT 106
P ++V IK + N R P ++V L + EV+ + NW +I +G
Sbjct: 318 TSIPSGKYVAIKNVYQLNIRSNPSTSASIVGI-LGQNQYAEVLDYSKDGNWIKIS-INGV 375
Query: 107 IGWINKSLLS 116
G+ ++S LS
Sbjct: 376 QGYASRSYLS 385
>gi|291522077|emb|CBK80370.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Coprococcus catus GD/7]
Length = 655
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 21/171 (12%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P A ++ EKK + + N R V+ T + G +
Sbjct: 349 LTTTKPAAASDSTQQTTEKKQETKETVYATAGVNIRAKASADADVIGTLIA-GYSITRTS 407
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY----------------- 135
+ W ++ D++G G+I L+ + + +++
Sbjct: 408 DSNGWSKV-DYNGQTGYIKSDYLTTTKPQVTESNQTSSSSNTSSSKSDIEEVKETVYATA 466
Query: 136 -INLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K + + + G + + S W G+IK +
Sbjct: 467 GVNIRAKASADADKIGTLAAGGSITRTGKTSSGWSRVDYNGQTGYIKSDYL 517
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKS-LLSGKRSAIVSPWNR-----KTNNPIYINLYKKP 142
E+ + + W I D G++ LL+G + + ++ + + +Y++P
Sbjct: 105 EIEEVKDGWAHITSGDCD-GYVEAKYLLTGTDAEAYAEEHKVSELVAKSQSEQMYMYEEP 163
Query: 143 DIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+ IV V LT+ G+W D G+I +
Sbjct: 164 SADAKIVTTVLWDQELTVLGASDDGQWVQVKVGDNTGYIPADSV 207
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ ++ +P+ + +V K+ G I E W + D +G+++ + +
Sbjct: 78 ADDYLKIHTEPNGDADVVGKLYSGSGCEIEEVKDGWAHITSGDCDGYVEAKYL 130
>gi|302872329|ref|YP_003840965.1| NLP/P60 protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575188|gb|ADL42979.1| NLP/P60 protein [Caldicellulosiruptor obsidiansis OB47]
Length = 318
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 50/175 (28%), Gaps = 29/175 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + + + +L A + + S N R P ++ +
Sbjct: 1 MNFRCLIAIILGIFLMFFSAKAFAQSAQAN-----------STINIRSAPSTNSKILGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINK----------SLLSGKRSAIVSPWNRKTN 131
KG +V+ W +I +DG +G++ S +S A K
Sbjct: 50 -PKGFEAQVLSNAGGWVKIS-YDGIVGYVKSDYITITNEKKSTVSNTSRASTEKTTAKAA 107
Query: 132 NP----IYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 108 QATVLKDNARLRSDMSTSSKVLKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S I+ G + +G W G++K I
Sbjct: 25 QSAQANSTINIRSAPSTNSKILGVFPKGFEAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLL 115
T+ A R V+ L G V V+ +E W +++ DGT+G++ LL
Sbjct: 109 ATVLKDNARLRSDMSTSSKVL-KTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMAYYLL 166
>gi|295695010|ref|YP_003588248.1| SH3 type 3 domain protein [Bacillus tusciae DSM 2912]
gi|295410612|gb|ADG05104.1| SH3 type 3 domain protein [Bacillus tusciae DSM 2912]
Length = 661
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 21/147 (14%)
Query: 50 EKKPLPRFVTIKA---SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDG 105
P P +K N R GP V+ L V ++ + W Q+ D G
Sbjct: 518 SGVPTPLPAGLKGETTDAVNLREGPSTSSRVITV-LPPATSVTALQRSPDGWFQV-DIGG 575
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
GW+ L +V+ +N+ + P + ++ +V G LLT +G
Sbjct: 576 QKGWVYGQYL-QLDHVLVT------RVDDALNVRRGPGLSFSVITQVPAGTLLTPVNTAG 628
Query: 166 E-------WCFGYNL-DTEGWIKKQKI 184
W +GW+ +
Sbjct: 629 GKPAIVNNWYHVRLPSGQDGWVYGDYV 655
>gi|152977437|ref|YP_001376954.1| NLP/P60 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152026189|gb|ABS23959.1| NLP/P60 protein [Bacillus cytotoxicus NVH 391-98]
Length = 575
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G G + ++ G + V+ + W +I + +G G+++ +S
Sbjct: 51 TVTADVLHVRSGSGTSHQIISRVYN-GQKLNVIGQENGWFKI-NLNGKTGYVSGEFVSQG 108
Query: 119 RSAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+A VS + + P S I+ +V G L + W +
Sbjct: 109 GAAKTNVSTGGNNKVTADVLRVRTSPSTSSSIIGRVYEGQTLHVIGQENGWLKINHNGQT 168
Query: 177 GWIKKQKIWG 186
G++ Q + G
Sbjct: 169 GYVSSQFVSG 178
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 15/133 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ W +I + G G+++ + +
Sbjct: 292 VNATSLRVRTGPATYHSVIGGVLN-GQTLHVIGSENGWFKI-NHQGQTGYVSSEFVKFVK 349
Query: 120 SAIVSPWNRKTNNPIY-------------INLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
P K P +N+ I+ + G + + +
Sbjct: 350 GGTAQPEQPKQQAPQTQGAIGDYYVNASALNVRSGEGTNYRIIGALPHGHKVQVLSENSG 409
Query: 167 WCFGYNLDTEGWI 179
W G+I
Sbjct: 410 WSKINYNGQTGYI 422
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 21/145 (14%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S R GP +T++ + + KG V+VV E ++W +I ++ G +I+K ++
Sbjct: 203 TVNVSSLRVRTGPSTSHTILGS-VRKGQVVQVVGEVQDWFKI-NYAGQSAYISKDYVTKG 260
Query: 119 -------------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
V N + + P ++ V G L
Sbjct: 261 GSNDNVIQGSQEEPKYQNGNHVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNGQTLH 320
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
+ W + G++ + +
Sbjct: 321 VIGSENGWFKINHQGQTGYVSSEFV 345
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 13/112 (11%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA------------IVSPWNRKTNN 132
G + V+ + W +I + +G G+++ +SG ++ + T N
Sbjct: 147 GQTLHVIGQENGWLKI-NHNGQTGYVSSQFVSGASASANSANNNSNSATVQPASGNYTVN 205
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P I+ V G ++ + +W +I K +
Sbjct: 206 VSSLRVRTGPSTSHTILGSVRKGQVVQVVGEVQDWFKINYAGQSAYISKDYV 257
>gi|114777628|ref|ZP_01452609.1| hypothetical protein SPV1_07971 [Mariprofundus ferrooxydans PV-1]
gi|114552099|gb|EAU54616.1| hypothetical protein SPV1_07971 [Mariprofundus ferrooxydans PV-1]
Length = 1592
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 30/197 (15%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+++ K + + +SL+ A AP+ + + L F + + GP
Sbjct: 811 MEVSKRIGWVYHSSLVLAKAGRNRSAPVTVAAEKVAKINPDQL-YFFSQTSDLL---AGP 866
Query: 72 GIMY-TVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLLS------------- 116
G + + + ++ +WR++ G GW+ LL
Sbjct: 867 GRQFDRIGWV--GRDESATIIDSKGDWRRVNMTISGKRGWVPADLLKLALATGEIIVDDA 924
Query: 117 -----GKRSAIVSPWN-RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K++AI + + ++ L P I S +V V G +++ E W
Sbjct: 925 KSTAPVKKTAIAAFSHYQQARVVKTATLRTVPSIDSGMVGWVAKGERVSVLEQKDGWMRV 984
Query: 171 ---YNLDTEGWIKKQKI 184
+ GWI+ +
Sbjct: 985 NPQQVGEKPGWIRGSYL 1001
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 51/176 (28%), Gaps = 43/176 (24%)
Query: 51 KKPLPRFVTIK----------------ASRAN---------SRIGPGIMYTVVCTYLTKG 85
K +P V +K A N R GPG Y VV
Sbjct: 736 KAAVPEVVALKSATPKAEAVPTASTATAPERNLYRFIRNSTLRAGPGANYDVVAWGGVDS 795
Query: 86 LPVEVVKEYENWRQIR-DFDGTIGWINKSLL-----SGKRSAIVSPWNRKTNNPIYINLY 139
E ++ +W ++ + IGW+ S L RSA V+ K LY
Sbjct: 796 YASE-LELKGDWIRVEMEVSKRIGWVYHSSLVLAKAGRNRSAPVTVAAEKVAKINPDQLY 854
Query: 140 ---------KKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
P Q + V TI + G+W GW+ +
Sbjct: 855 FFSQTSDLLAGPGRQFDRIGWVGRDESATIIDSKGDWRRVNMTISGKRGWVPADLL 910
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Query: 114 LLSGKRSA-----IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW- 167
L SG ++A I + + K P S I+ G ++T+ G W
Sbjct: 618 LTSGTKTAAKPESIKVAPQSEHAIYRTTTIRKGPGSLSDIMGWAGAGAMVTVLAQQGGWV 677
Query: 168 -CFGYNLDTEGWIKKQKI 184
GWI I
Sbjct: 678 NVRMQESGRTGWIDIGSI 695
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWIN-KSLLSGKRSAIVS 124
R GPG + ++ G V V+ + W +R + G GWI+ S+ + +V+
Sbjct: 647 IRKGPGSLSDIMGW-AGAGAMVTVLAQQGGWVNVRMQESGRTGWIDIGSIQKEAPATVVA 705
Query: 125 PWNRKTNNPIYI 136
+ +
Sbjct: 706 VKQKAAPAEAAV 717
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
L PD VA + G + G+W + +GW+ +
Sbjct: 38 LRNGPDSAYAPVAALSAGDRVIEVARKGDWIKVRQASGSADGWLYAASV 86
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++ + I A+ + +LS + + + AS R GP Y V
Sbjct: 1 MINRNAILACALLWVALSAGSLSAAEGDT-------YALLAASS--LRNGPDSAYAPV-A 50
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKS 113
L+ G V V +W ++R G GW+ +
Sbjct: 51 ALSAGDRVIEVARKGDWIKVRQASGSADGWLYAA 84
>gi|257125651|ref|YP_003163765.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049590|gb|ACV38774.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 155
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 18/138 (13%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI---GWINK 112
+ K + N R P VV + G V + NW ++ D G+I+
Sbjct: 23 YMTSAKGNGINVRTSPTTKSRVVKV-VPSGDIVNSDERSGNWYKVESVDSESEYNGYIHN 81
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGY 171
SLL R N+ ++S ++ KV V+ TI + W
Sbjct: 82 SLLK-------PVTERNVLPNGNTNVRAAGSLKSKVIGKVNSEDVIYTIGNKNKGWYHVR 134
Query: 172 NLDTE------GWIKKQK 183
+ G+I + +
Sbjct: 135 LSKYQANGKKFGYIHESR 152
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD----TEGWIKKQKI 184
+ IN+ P +S +V V G ++ E SG W ++D G+I +
Sbjct: 25 TSAKGNGINVRTSPTTKSRVVKVVPSGDIVNSDERSGNWYKVESVDSESEYNGYIHNSLL 84
>gi|153871210|ref|ZP_02000439.1| protein containing bacterial SH3 domain [Beggiatoa sp. PS]
gi|152072324|gb|EDN69561.1| protein containing bacterial SH3 domain [Beggiatoa sp. PS]
Length = 172
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 2/128 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ + N R +V T K V ++ W +I+ +G IG+ + +
Sbjct: 40 ISTDRTPLNIRKNASQTSKIV-TKAAKDSAVRILGTRGAWYKIKLNNGKIGYGSMDYIRE 98
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
+N+ + ++ +VAK + I G W N
Sbjct: 99 VTPRTCPTCGIIATQSSPLNIRRSASQRAKVVAKASKNSTVRILSQYGGWYQVLLNNGKV 158
Query: 177 GWIKKQKI 184
G+ I
Sbjct: 159 GYASTAYI 166
>gi|259416274|ref|ZP_05740194.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
gi|259347713|gb|EEW59490.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
Length = 217
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFD 104
+ +P+ I+ASRAN R+GPG + V+ L G V V+ ++ W + +
Sbjct: 142 AAVATPEPIGDMRKIRASRANVRLGPGTRFPVLMQLLA-GDKVRVLNDDHSGWSLLENPK 200
Query: 105 -GTIGWINKSLLSGKRS 120
G +GWI SLLS K+S
Sbjct: 201 TGQVGWIAASLLSAKQS 217
>gi|307243143|ref|ZP_07525317.1| NlpC/P60 family protein [Peptostreptococcus stomatis DSM 17678]
gi|306493503|gb|EFM65482.1| NlpC/P60 family protein [Peptostreptococcus stomatis DSM 17678]
Length = 476
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 24/146 (16%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS---- 116
+S N R+GP + + + KG +VV + W ++ DGT GW + ++
Sbjct: 170 SSYLNIRVGPSVSNGISGV-VYKGEIFKVVSKSSNGWYKVVLKDGTTGWASGKYINLTSE 228
Query: 117 GKRSAIV-----------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
++ I S K N+ + +N+ + ++ + +
Sbjct: 229 QDKTNITDYRPSNIKQDSRSQASGSSSQGKVNSSVGLNIRSGAGTGNSVIGTLANNATIN 288
Query: 160 IRECSGEWCFGYNL-DTEGWIKKQKI 184
I W T G++ I
Sbjct: 289 IIGEENGWYKIKLDNGTTGYVGANYI 314
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R G G +V+ T L + ++ E W +I+ +GT G++ + +S
Sbjct: 266 NIRSGAGTGNSVIGT-LANNATINIIGEENGWYKIKLDNGTTGYVGANYISK 316
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+ INL ++P S V+++ G +T++E + W GW+
Sbjct: 32 VVEQQDAQTTTGINLREQPGATSNKVSELHAGSKITVKERNNGWVNVQTEDGKSGWV 88
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ ++ +A ++ + E + + + + N R PG V
Sbjct: 1 MKKAITVLGLGAAAVAISVSNASAMEQQDASVVEQQDAQTTTGINLREQPGATSNKVSE- 59
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
L G + V + W ++ DG GW++ +S K
Sbjct: 60 LHAGSKITVKERNNGWVNVQTEDGKSGWVSGYYVSDK 96
>gi|159029362|emb|CAO90738.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 688
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 60/185 (32%), Gaps = 42/185 (22%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVV 91
P+++++ E P + A+ N R GPG+ Y G V+V+
Sbjct: 505 PVISIAKVPEDVSSVPSG---SSNATIVGEPGQKNIRRGPGLEYPTR-HIAYPGDRVQVI 560
Query: 92 KEYEN-----WRQIRDFD-GTIGWINKSLL--SGKRSAIVSPWNRK-------------- 129
K N W I G GWI +LL G+ + P +
Sbjct: 561 KSVRNSDNFIWYHIYFPQSGADGWIAGNLLAVDGQTTYPSQPQIQPPSQPPPKASSRGTN 620
Query: 130 ---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNL--DTEGWI 179
+ P N+ +V V G L I S + W Y+ T GWI
Sbjct: 621 ATVSGTPGTKNMRSGAGTAYGVVGTVRTGDRLQILGSSYDRGGYQWYKVYHPQSGTTGWI 680
Query: 180 KKQKI 184
Q I
Sbjct: 681 AAQLI 685
>gi|319650660|ref|ZP_08004799.1| hypothetical protein HMPREF1013_01404 [Bacillus sp. 2_A_57_CT2]
gi|317397517|gb|EFV78216.1| hypothetical protein HMPREF1013_01404 [Bacillus sp. 2_A_57_CT2]
Length = 229
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 13/142 (9%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY----ENWRQIRDF 103
+ LP V + S N G Y VV T + G ++V+ + W ++
Sbjct: 81 PPAEGQLPSAVYVTKSSVNIHSGASADYKVVAT-KSIGSSLKVIDSFKASTGLWYRVELS 139
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT---- 159
GW+ +S + + +P T ++L K ++ + G +L
Sbjct: 140 ATLKGWVFSGNVSTDKPSTTAPTQVITTGD--VHLRKGATTSYEVIQTLPKGTVLKYIST 197
Query: 160 -IRECSGEWCFGYNL-DTEGWI 179
+ W +GW+
Sbjct: 198 FVNSKGETWYNAQTSAGVKGWV 219
>gi|121534384|ref|ZP_01666208.1| SH3, type 3 domain protein [Thermosinus carboxydivorans Nor1]
gi|121307154|gb|EAX48072.1| SH3, type 3 domain protein [Thermosinus carboxydivorans Nor1]
Length = 304
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKSLLSGK 118
+ + N R GPG + + T + KG V + E W ++ DG T GWI L+S
Sbjct: 237 VTGNNVNVRTGPGTNFPSI-TKVNKGTTVTIKDEAFGWYKVVLPDGTTTGWIASWLVSVN 295
Query: 119 RSAIVSPWN 127
+P
Sbjct: 296 GMVTPAPKG 304
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--TEGWIK 180
+N+ P + KV G +TI++ + W D T GWI
Sbjct: 235 GVVTGNNVNVRTGPGTNFPSITKVNKGTTVTIKDEAFGWYKVVLPDGTTTGWIA 288
>gi|261420600|ref|YP_003254282.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC61]
gi|319768271|ref|YP_004133772.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC52]
gi|261377057|gb|ACX79800.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC61]
gi|317113137|gb|ADU95629.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC52]
Length = 225
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 13/139 (9%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGW 109
LP V + + A R G Y V+ TY G ++VV W I GW
Sbjct: 85 LPSVVYVAKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNIILSSSLKGW 143
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CS 164
I+ +S SA+ S + +N+ K +A V G + +
Sbjct: 144 IHSGDVS--TSAVSSDSTKHVIATAAVNIRKGATTSYPTIATVPKGTEMVYIQPFTNSKG 201
Query: 165 GEWCFGY-NLDTEGWIKKQ 182
+W + GW+ +
Sbjct: 202 EKWYNVQLSDGRRGWMAAE 220
>gi|297625698|ref|YP_003687461.1| cell-wall peptidases, NlpC/P60 family secreted protein
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921463|emb|CBL56016.1| cell-wall peptidases, NlpC/P60 family secreted protein
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 572
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 4/157 (2%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPV 88
+AI L +L+ +F + + A+ N R GP +V+ T +
Sbjct: 10 VAITSTLVAG-SLATASLVFAPLAQADYSPLAATATVNVRQGPDTSSSVLATLSSGDTVT 68
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ E + W I ++G WI ++ +A + + + +
Sbjct: 69 QRGAEQDGWLPIT-YNGANAWIQAQYVASTTAATQKDQISTAELTADAYVRTAANANAWV 127
Query: 149 VAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + SG++ GWI + +
Sbjct: 128 LGTAHTGDKVGITGQASGDYTPVNFYGRAGWIATKLL 164
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-REC 163
G GWI LLS +++ S + Y+ + + + + PG + + +
Sbjct: 154 GRAGWIATKLLSAADASVTSIKITTAISSDYLWVRGGESTAAQSIGMLYPGDRVDVTGDP 213
Query: 164 SGEWCFGYNLDTEGWIKKQ 182
G W ++
Sbjct: 214 VGGWVPINFNGKTAFVAAN 232
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 21/70 (30%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE----------YENWRQIRDFDGTIGW 109
+ N R+GPGI PV V+KE +W ++ +DG W
Sbjct: 305 YTTADVNVRVGPGIDQ----------QPVTVLKENSQVAATGKTSGDWTEVS-YDGASRW 353
Query: 110 INKSLLSGKR 119
I+ LS +
Sbjct: 354 ISSQYLSDTK 363
>gi|62185251|ref|YP_220036.1| hypothetical protein CAB638 [Chlamydophila abortus S26/3]
gi|62148318|emb|CAH64085.1| conserved hypothetical exported protein [Chlamydophila abortus
S26/3]
Length = 408
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 18 MPKILQNSLIFTL-----AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ ++ + AP + + + + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSVSLHAAPSTSKAPAAQTDKASFSPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ ++V L+KG V V+ E +++ + +G G++ ++ +
Sbjct: 61 VDSSIV-KELSKGDYVAVIGESKDYYIVAAPEGLKGYVFRTFV-----------LDNVIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLD 174
+N+ +P + ++A++ G + T + G+W D
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTEIQATSSQPQGKWLEIALPD 152
>gi|255526316|ref|ZP_05393231.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296186988|ref|ZP_06855388.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
gi|255509964|gb|EET86289.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296048426|gb|EFG87860.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
Length = 395
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R +++ T + K + ++ W QI ++G GW+ +L+ ++I S
Sbjct: 276 ANFRSKASTDSSIIGT-IPKDTILYLIDYSAGWYQIS-YNGQTGWVWGNLI----TSIPS 329
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQ 182
N +N+ P + I+ + + G+W EG+
Sbjct: 330 GKYVTINKVYQLNIRNNPSTSADILGYLSQNQYAEVINYSNDGKWLKIRINGIEGYASGA 389
Query: 183 KI 184
+
Sbjct: 390 YL 391
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ TN N K S I+ + +L + + S W GW+ WG
Sbjct: 268 KITNVTTAANFRSKASTDSSIIGTIPKDTILYLIDYSAGWYQISYNGQTGWV-----WG 321
>gi|312876904|ref|ZP_07736880.1| NLP/P60 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796315|gb|EFR12668.1| NLP/P60 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 319
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 51/169 (30%), Gaps = 31/169 (18%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+A + + A + + S N R P ++ + KG
Sbjct: 9 LLVATFLVIFSAKAFAQSAQA-------------KSTINIRSAPSTSSKILGVF-PKGFK 54
Query: 88 VEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKTNN-----------P 133
+V+ W +I +DG +G++ ++ + K SA+ +
Sbjct: 55 AQVLSSAGGWVKIS-YDGIVGYVKSDYITITNDKTSAVSNTSRTSVAKTAAKAAHATVLK 113
Query: 134 IYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 114 DNARLRSDMSTSSKVLKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S I+ G + +G W G++K I
Sbjct: 25 QSAQAKSTINIRSAPSTSSKILGVFPKGFKAQVLSSAGGWVKISYDGIVGYVKSDYI 81
>gi|114762964|ref|ZP_01442394.1| putative hypothetical Gifsy-1 prophage protein [Pelagibaca
bermudensis HTCC2601]
gi|114544288|gb|EAU47296.1| putative hypothetical Gifsy-1 prophage protein [Roseovarius sp.
HTCC2601]
Length = 376
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 28/195 (14%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M + A+ ++ + P F + AS N R GP
Sbjct: 108 LMRNAARREETADYALSIHIGGAITPPEPDFADGSAGGPDFWEVTASGLNIRSGPSAGGA 167
Query: 77 VVCTYLTKGLPVEVVKEYEN----WRQIRDFDGTI-GWINKSLL--SGKRSAIVSPWNRK 129
VV G + + + W + +G + GW L SG + +P
Sbjct: 168 VVGR-ANHGQVLRNLGCRGSGDARWCHVETPNGLLSGWAAGRFLAESGGPAQASAPQVST 226
Query: 130 TNNP--------------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGY 171
Y+N+ + IVA+ G++L C G WC
Sbjct: 227 ETAAMGPDFWEVTGVPANDYLNIRTGAGTANTIVARAPNGMVLRNLGCRGSGDARWCHVQ 286
Query: 172 N--LDTEGWIKKQKI 184
+GW+ +
Sbjct: 287 TPDGGQDGWVSGAYL 301
>gi|229083955|ref|ZP_04216256.1| Peptidase, M23/M37 [Bacillus cereus Rock3-44]
gi|228699355|gb|EEL52039.1| Peptidase, M23/M37 [Bacillus cereus Rock3-44]
Length = 286
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P I +++ L G + V + +W +I ++ +G++ K +S
Sbjct: 13 VNANVLNIRSKPTINSSII-DRLPNGAFISVQETTGDWYKIS-YNEQVGYVKKEFVSHTS 70
Query: 120 SAIVSPWNRKTNNPIYI-----NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+V + Y+ + + ++ ++ G + I E G W
Sbjct: 71 EPLVKGITTQKEPSFYVATPTLKVRSGAGTNTAVIGSLQNGTQIKIVETVGTWYKIRFGT 130
Query: 175 TEGWIKKQKI 184
T G++ K I
Sbjct: 131 TYGFVAKHYI 140
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N N +N+ KP I S I+ ++ G ++++E +G+W + G++
Sbjct: 2 THSTEQKNHYIVNANVLNIRSKPTINSSIIDRLPNGAFISVQETTGDWYKISYNEQVGYV 61
Query: 180 KKQKI 184
KK+ +
Sbjct: 62 KKEFV 66
>gi|220928196|ref|YP_002505105.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219998524|gb|ACL75125.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 298
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 53/167 (31%), Gaps = 19/167 (11%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + + L+ + F A+ + I + R P +
Sbjct: 1 MVQKINKVLVGCFIVLFLAFASTAVMAASMPAK---------ITGTNVKMRKAPTTASVI 51
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V V V + W ++ ++ GW+N + + + + + N +N
Sbjct: 52 VTKLT--NAKVTVTDHSKGWYKVS-YNKKTGWVNGNYVRLQST-------KGIINANGVN 101
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S +++ ++ L I + + W G++ + +
Sbjct: 102 FRKSSGTNSKVISSLKKNTSLQILDITKGWNKVKIGSKVGYVSSKFV 148
>gi|229103563|ref|ZP_04234245.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228680059|gb|EEL34254.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 492
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 54/176 (30%), Gaps = 24/176 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + A F L + + I A N R P V
Sbjct: 1 MEANMKKIIGAATATVFGLGAFTTSAIAETIVT-----------ADVLNVREKPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +G ++V+ E W +I D +G +++ +N
Sbjct: 50 I-EKVKEGQKLKVINTEEGWSKI-DLNGKELFVSSEFTKDIYHV----------TANLLN 97
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + + +S I+ +++ V+ + + W + + P E
Sbjct: 98 VRSEANTESEILGRLKKDDVIESTHQAKDGWLQFEYKGKTAYANVSFLSSTAPSEK 153
>gi|260892339|ref|YP_003238436.1| NLP/P60 protein [Ammonifex degensii KC4]
gi|260864480|gb|ACX51586.1| NLP/P60 protein [Ammonifex degensii KC4]
Length = 245
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 26/126 (20%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRS 120
P +V L G PV V++ +NW ++R DG++GW+ + L+ G+ +
Sbjct: 10 VHEEPETSSPLVTQAL-LGEPVLVLERRKNWCRVRVLDGSVGWVQQVALTTPVLAGGEPA 68
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWI 179
++ P + + +Y+ G + RE WC EGW+
Sbjct: 69 LVIKPKAKLDSFALYL------------------GTAVWTRERREGWCRVFSPSGHEGWV 110
Query: 180 KKQKIW 185
+ + +W
Sbjct: 111 EAEALW 116
>gi|294497270|ref|YP_003560970.1| hypothetical protein BMQ_0479 [Bacillus megaterium QM B1551]
gi|294347207|gb|ADE67536.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 178
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 25/182 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPI-----LALSHEKEIFEKKPLPRFV-TIKASRANSRIGP 71
M I ++ + LA F + + EK P V + A+ N R P
Sbjct: 1 MKTITKSISVLALAAGFTFSSLSGTLPFTHEQTASAAEKINAPFSVYEVTANVLNIRSKP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
++ T K +EVVK +W I+ GT G+I+ S L S +
Sbjct: 61 STQGKILDTLRKKDQ-IEVVKFVNADWAAIKIIGGT-GYISTSYLMKVPSTV-------- 110
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--------ECSGEWCFGYNLDTEGWIKKQ 182
+ +NL P + +V + G ++ + S +W F +G++
Sbjct: 111 HTAANLNLRTGPSTSNKVVTTIPKGKSVSFLAWGYSKDNKLSFDWAFVEYNGFKGYVSTS 170
Query: 183 KI 184
+
Sbjct: 171 YL 172
>gi|227510274|ref|ZP_03940323.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227524425|ref|ZP_03954474.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227088384|gb|EEI23696.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227189926|gb|EEI69993.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 280
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+K ++ N R GP + Y+V T + +G ++V+ NW ++ TIGW+ L++
Sbjct: 33 VTVKVNQLNIRTGPSVTYSVKAT-VKQGAQLQVISRKNNWIKVIYKHKTIGWVASWLVTN 91
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWI 179
I N T +N+ P + + A V+ G L + W Y T GW+
Sbjct: 25 FIALYSNSVTVKVNQLNIRTGPSVTYSVKATVKQGAQLQVISRKNNWIKVIYKHKTIGWV 84
Query: 180 K 180
Sbjct: 85 A 85
>gi|227513281|ref|ZP_03943330.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
gi|227083482|gb|EEI18794.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
Length = 280
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+K ++ N R GP + Y+V T + +G ++V+ NW ++ TIGW+ L++
Sbjct: 33 VTVKVNQLNIRTGPSVTYSVKAT-VKQGAQLQVISRKNNWIKVIYKHKTIGWVASWLVTN 91
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWI 179
I N T +N+ P + + A V+ G L + W Y T GW+
Sbjct: 25 FIALYSNSVTVKVNQLNIRTGPSVTYSVKATVKQGAQLQVISRKNNWIKVIYKHKTIGWV 84
Query: 180 K 180
Sbjct: 85 A 85
>gi|329955891|ref|ZP_08296694.1| NlpC/P60 family protein [Bacteroides clarus YIT 12056]
gi|328525271|gb|EGF52321.1| NlpC/P60 family protein [Bacteroides clarus YIT 12056]
Length = 400
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLS 116
I S AN R+ P ++ L G+PV V++ + W +I+ D I W+++ ++
Sbjct: 110 INVSVANLRVSPDFSSEMMTQGLM-GMPVRVLQR-DGWIRIQTPDDYIAWVHRVGVHPVT 167
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+ A + + Y +Y +PD S ++ V G L G +
Sbjct: 168 KEEMAAWNSAEKVVVTAHYGFVYSEPDQTSQTISDVAAGNRLKWEGSKGAFYKVTYPDGR 227
Query: 176 EGWIKKQ 182
+G+I K
Sbjct: 228 QGYISKS 234
>gi|229161825|ref|ZP_04289803.1| 3D domain protein [Bacillus cereus R309803]
gi|228621626|gb|EEK78474.1| 3D domain protein [Bacillus cereus R309803]
Length = 464
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 24/168 (14%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + A F + ++ + I A N R P V
Sbjct: 1 MEANMKKIIGAATATVFGMGAFTTVATAETIVT-----------ADVLNVREKPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + +G ++V+ + W +I D DG +++ +N
Sbjct: 50 V-EKVKEGQELKVINTEDGWSKI-DLDGKEVFVSSEFTKDVYHV----------TANLLN 97
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +S I+ +++ V+ + + W + +
Sbjct: 98 VRSDANTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 145
>gi|116333379|ref|YP_794906.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
gi|116098726|gb|ABJ63875.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
Length = 283
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VT S N R GPG+ Y + K + ++ E NW +RD GW+ L+
Sbjct: 34 VTATVSNLNLRNGPGLTYQAT-HKVKKNSRLTILGEKNNWYHVRDSQNHFGWVASWLVD 91
>gi|314956997|gb|EFT01105.1| bacterial SH3 domain protein [Propionibacterium acnes HL027PA1]
Length = 332
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 17/171 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 4 PKRSVRGAAATIALTSGISVVAPAVIGSVAHAANTQT------MYTTADVNVRSASSNSG 57
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V+ +G V+V E W + +GT GWI + L+ + V P
Sbjct: 58 RVLTV-AARGQSVKVTGEKVRGWVPV-AVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTM 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIK 180
+ +N+ ++ E G + I G W GWI
Sbjct: 116 IAAVPVNVRSDSANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIY 166
>gi|317497534|ref|ZP_07955853.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895217|gb|EFV17380.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 381
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SG 117
+ N R I +V + KG V+K+ W ++R G++ L
Sbjct: 55 TTTLNIRKKGSINAKIVGK-MKKGNIATVLKKGSEWSKVR-SGNVTGYVKNQYLVFGDEI 112
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K A + + + KK S IV V L +++ + +W G
Sbjct: 113 KNFAKQNVKKVAKVQTETLRVRKKASTDSKIVTLVSEDDKLKVKKQTNDWAKVKVDGQTG 172
Query: 178 WIKKQ 182
++ K
Sbjct: 173 YVSKD 177
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+N+ KK I + IV K++ G + T+ + EW + + G++K Q + ++ E+
Sbjct: 56 TTLNIRKKGSINAKIVGKMKKGNIATVLKKGSEWSKVRSGNVTGYVKNQYL--VFGDEI 112
>gi|225175538|ref|ZP_03729532.1| N-acetylmuramoyl-L-alanine amidase [Dethiobacter alkaliphilus AHT
1]
gi|225168867|gb|EEG77667.1| N-acetylmuramoyl-L-alanine amidase [Dethiobacter alkaliphilus AHT
1]
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+A + E E + + AS N R P + L +G VEV+ + +W Q
Sbjct: 115 IAPAPEPASQEVPESEQMARVTASGLNVRPDPSTDNERI-DVLAQGQTVEVLAKQNDWLQ 173
Query: 100 IRDFDGTIGWINKSLLSG-KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVL 157
+ DG GWI + ++ R+A + + D ++ V+ + E V+
Sbjct: 174 VSLPDGRAGWIAAAYVTTFSRNAANGNGSLAGRIIAIDPGHGGTDPGAVGVSGLPEKDVV 233
Query: 158 LTI 160
L +
Sbjct: 234 LDV 236
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
+ +N+ P + + + G + + +W D GWI
Sbjct: 126 VPESEQMARVTASGLNVRPDPSTDNERIDVLAQGQTVEVLAKQNDWLQVSLPDGRAGWIA 185
Query: 181 KQKI 184
+
Sbjct: 186 AAYV 189
>gi|167766706|ref|ZP_02438759.1| hypothetical protein CLOSS21_01212 [Clostridium sp. SS2/1]
gi|167711643|gb|EDS22222.1| hypothetical protein CLOSS21_01212 [Clostridium sp. SS2/1]
gi|291559929|emb|CBL38729.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 381
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SG 117
+ N R I +V + KG V+K+ W ++R G++ L
Sbjct: 55 TTTLNIRKKGSINAKIVGK-MKKGNIATVLKKGSEWSKVR-SGNVTGYVKNQYLVFGDEI 112
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K A + + + KK S IV V L +++ + +W G
Sbjct: 113 KNFAKQNVKKVAKVQTETLRVRKKASTDSKIVTLVSEDDKLKVKKQTNDWAKVKVDGQTG 172
Query: 178 WIKKQ 182
++ K
Sbjct: 173 YVSKD 177
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+N+ KK I + IV K++ G + T+ + EW + + G++K Q + ++ E+
Sbjct: 56 TTLNIRKKGSINAKIVGKMKKGNIATVLKKGSEWSKVRSGNVTGYVKNQYL--VFGDEI 112
>gi|229159803|ref|ZP_04287810.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|228623542|gb|EEK80361.1| Peptidase, M23/M37 [Bacillus cereus R309803]
Length = 386
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P + +++ L G V + +E W +I +G G++ K+ +S
Sbjct: 110 VNANALNVRSEPNLESSIL-DVLPNGKFVTIQEEQGEWYKI-LHNGQTGYVQKAFISNGS 167
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 168 QPLVKGITVQNNTKYTVATPKLNVRSNASTSSSLLGSLQNGTQVQVVETVGTWYKIRFGT 227
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 228 GYGYVAKHYV 237
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLY 139
+ V ++++ +W ++ + +G++ K LL K + N+ N +N+
Sbjct: 64 IRFNTKVNILEKTNDWYKVS-VNNKVGYVQKDTILLKNK----LQSNNQYIVNANALNVR 118
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+++S I+ + G +TI+E GEW + G+++K I
Sbjct: 119 SEPNLESSILDVLPNGKFVTIQEEQGEWYKILHNGQTGYVQKAFI 163
>gi|170758368|ref|YP_001785852.1| putative peptidoglycan hydrolase [Clostridium botulinum A3 str.
Loch Maree]
gi|169405357|gb|ACA53768.1| putative peptidoglycan hydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 766
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW DT G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKDTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 57/141 (40%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ + ++K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIGS-VSKDQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S +S + + ++ +NL + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKDTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGSVSKDQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|56421690|ref|YP_149008.1| hypothetical protein GK3155 [Geobacillus kaustophilus HTA426]
gi|56381532|dbj|BAD77440.1| hypothetical protein [Geobacillus kaustophilus HTA426]
Length = 224
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 48/139 (34%), Gaps = 13/139 (9%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGW 109
LP V + + A R G Y V+ TY G ++VV W I GW
Sbjct: 84 LPSVVYVVKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNIILSSSLKGW 142
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CS 164
I +S SA+ S + +N+ K I+A V G + +
Sbjct: 143 IYSGDVS--TSAVSSDSTKHVIATAAVNIRKGATTSYPIIATVPKGTEMVYIQPFTNSKG 200
Query: 165 GEWCFGY-NLDTEGWIKKQ 182
+W + GW+ +
Sbjct: 201 EKWYNVQLSDGRRGWMDAE 219
>gi|229116478|ref|ZP_04245867.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228666990|gb|EEL22443.1| 3D domain protein [Bacillus cereus Rock1-3]
Length = 492
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 54/176 (30%), Gaps = 24/176 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + A F L + + I A N R P V
Sbjct: 1 MEANMKKIIGAATATVFGLGAFTTSAIAETIVT-----------ADVLNVREKPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +G ++V+ E W +I D +G +++ +N
Sbjct: 50 I-EKVKEGQKLKVINTEEGWSKI-DLNGKELFVSSEFTKDIYHV----------TANLLN 97
Query: 138 LYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + + +S I+ +++ V+ + + W + + P E
Sbjct: 98 VRSEANTESEILGRLKKDDVIESTHQAKDGWLQFEYKGKTAYANVSFLSSTAPSEK 153
>gi|158320806|ref|YP_001513313.1| NLP/P60 protein [Alkaliphilus oremlandii OhILAs]
gi|158141005|gb|ABW19317.1| NLP/P60 protein [Alkaliphilus oremlandii OhILAs]
Length = 374
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I R+GP + V+ T ++ G V ++ E W ++ + GW++ +
Sbjct: 108 ITGDGLRVRVGPSLNDNVI-TNVSSGHIVTIIGESAEWYEVILSNNVKGWVHSDYVK--- 163
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLDTEGW 178
I I L + V ++ ++ I+ +W + + EGW
Sbjct: 164 --ITHNLPTGRLVNDAIALKEYAGENEKNVDTLKISEMVYIKGYQDKWYNVITSSNKEGW 221
Query: 179 IKKQKI 184
++ + +
Sbjct: 222 VESKYV 227
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 85 GLPVEVVKEYENWRQIRDFDGT-IGWINKSLLSGKRSAIVSPWN-------RKTNNPIYI 136
G V + + + W + +G GWI+ + AI++ N + +
Sbjct: 60 GSKVMIKEILDEWYLVELSNGKGEGWISS------QEAIITDANYRENKIKKGEITGDGL 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ P + ++ V G ++TI S EW + + +GW+ +
Sbjct: 114 RVRVGPSLNDNVITNVSSGHIVTIIGESAEWYEVILSNNVKGWVHSDYV 162
>gi|56963840|ref|YP_175571.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
gi|56910083|dbj|BAD64610.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
Length = 375
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 26/192 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +A+ F I S+ + I + N R P V+
Sbjct: 1 MKGKSFIVVALLFSTFFIFLESYASAYTVQTGT----VITNTSLNVRENPSNDAPVIGQ- 55
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS--------------------A 121
L G +E V +W +I ++G G++N + G R A
Sbjct: 56 LQSGAKIEYVDVGYDWVRIT-YNGKAGYLNSLFIKGNRPTSQATGHQAESHQTTSHQPPA 114
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K + + + S ++ K++ G ++ R + W +I
Sbjct: 115 VSGVNVGKVTAKNGLIVRAQASTNSAMLGKIDYGSMVEYRISTDGWGQITYNGQRAFIDT 174
Query: 182 QKIWGIYPGEVF 193
+ G E
Sbjct: 175 SYLSGSTSNESI 186
>gi|168205475|ref|ZP_02631480.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens E
str. JGS1987]
gi|170663005|gb|EDT15688.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens E
str. JGS1987]
Length = 1044
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 562 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKNIKDE 619
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + + +N+ + S ++ + +TI G +
Sbjct: 620 VVTEPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKI 679
Query: 171 YNLDTEGWIKKQKI 184
+ G++ K+ I
Sbjct: 680 EYKGSHGYVAKEYI 693
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 392 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDVTES 449
Query: 118 KRSAIVSPWNRKTNNPIY------------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S V+ K + P +N+ + S ++ + +TI G
Sbjct: 450 NNSNQVTQTPEKPSTPENTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEG 509
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 510 AFYKIEYKGSHGYVAKEYI 528
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 60/179 (33%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPSGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|126739699|ref|ZP_01755391.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
gi|126719345|gb|EBA16055.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
Length = 250
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+A A + + E + R I+ASR N R GPG +Y V+ L G V+V+ +
Sbjct: 168 VASTEAETADLAAEEALDIRR---IRASRVNMRQGPGTIYPVIARLLN-GDEVQVIDDSG 223
Query: 96 -NWRQIRDFDGTI-GWINKSLLSGKRS 120
W +R G GW+ SL+S K S
Sbjct: 224 TGWLHLRARKGDKIGWVAASLVSRKSS 250
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTE--GWIKKQKI 184
+N+ + P ++A++ G + + + SG W + GW+ +
Sbjct: 191 ASRVNMRQGPGTIYPVIARLLNGDEVQVIDDSGTGWLHLRARKGDKIGWVAASLV 245
>gi|254475752|ref|ZP_05089138.1| SH3, type 3 [Ruegeria sp. R11]
gi|214029995|gb|EEB70830.1| SH3, type 3 [Ruegeria sp. R11]
Length = 225
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTV 77
+ SL L+ P L + ++ P+ ++ A+R N R GPG +Y V
Sbjct: 122 TVQLASLSNGLSGLSDATPEAELITAAAVVDEIEDPKADIRSVTATRVNMRSGPGTVYPV 181
Query: 78 VCTYLTKGLPVEVVKEYE-NWRQIRDFD-GTIGWINKSLLSGKRS 120
+ LT G V+V+++ W +R + G +GWI SL+S K S
Sbjct: 182 L-DQLTNGAEVQVIEDIGTGWLHLRTVEGGKVGWIAASLISKKGS 225
>gi|295702642|ref|YP_003595717.1| hypothetical protein BMD_0481 [Bacillus megaterium DSM 319]
gi|294800301|gb|ADF37367.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 178
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 25/182 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPI-----LALSHEKEIFEKKPLPRFV-TIKASRANSRIGP 71
M I ++ + LA F + + EK P V + A+ N R P
Sbjct: 1 MKTITKSISVLALAAGFTFSSLSGTLPFTHEQTASAAEKINAPFSVYEVTANVLNIRSKP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
++ T K +EVVK +W I+ GT G+I+ S L + + + N
Sbjct: 61 STQGKILDTLRKKDQ-IEVVKFVNADWAAIKIIGGT-GYISTSYLMKVPTTVHTTAN--- 115
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTI--------RECSGEWCFGYNLDTEGWIKKQ 182
+NL P + +V + G L+ ++ S +W F +G++
Sbjct: 116 -----LNLRTGPSTSNKVVTTIPKGKSLSFLAWGYSKDKKLSFDWAFVEYNGFKGYVSTA 170
Query: 183 KI 184
+
Sbjct: 171 YL 172
>gi|172057138|ref|YP_001813598.1| 3D domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|171989659|gb|ACB60581.1| 3D domain protein [Exiguobacterium sibiricum 255-15]
Length = 301
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 10/154 (6%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
A A + + E E + VT+ + N R P V + KG
Sbjct: 4 AVFAAGLAATALSVGFAQETEAASET-----VTVNTAVLNVRTAPTTASADVGN-VYKGQ 57
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ V W Q + +G +++ + S S + + T +N+ +P S
Sbjct: 58 KLNVEGRSGAWIQ-TNINGQKRYVHGAYTSAGSSF---DFKKATVTTAVLNVRTQPTTNS 113
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
V + G + + G W ++
Sbjct: 114 KDVGNLYKGQSVNVESKVGAWIKTTIDGKTRYVH 147
>gi|126734749|ref|ZP_01750495.1| hypothetical protein RCCS2_12769 [Roseobacter sp. CCS2]
gi|126715304|gb|EBA12169.1| hypothetical protein RCCS2_12769 [Roseobacter sp. CCS2]
Length = 173
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPR--FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A+ +AP + E P PR I N R GPG + VV T L +G
Sbjct: 87 AVIKTVAPQFDATDETG---DTPEPRRDIRIIAGDWVNMRQGPGTDFGVVTT-LPRGTEA 142
Query: 89 EVVKEY-ENWRQIRDFD-GTIGWINKSLLSG 117
E++ E + W +IR + G +GW+ LLS
Sbjct: 143 EIIDETADQWARIRLLETGQVGWMASWLLSD 173
>gi|172057625|ref|YP_001814085.1| SH3 type 3 domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171990146|gb|ACB61068.1| SH3 type 3 domain protein [Exiguobacterium sibiricum 255-15]
Length = 360
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 12/161 (7%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
S I ++ +P L + +T+ R P ++ +T
Sbjct: 6 TSFILAGVLFGVFSPSLIAEAATK----------LTVTTDVLRVREKPSTTSKILGK-IT 54
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
KG +W +I + G+I+K + ++ + + +N+ P
Sbjct: 55 KGAVYTSNGTSGSWYKIT-YKSKPGYIHKDYVRTSMTSKYTSTGARYTTVGTLNVRTAPS 113
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V ++ GV + SG W + ++ Q +
Sbjct: 114 TTAKTVTQLNKGVKVASYGTSGSWTRILYNGSYRYVSTQYL 154
>gi|123435033|ref|XP_001308910.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890613|gb|EAX95980.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 260
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 15/121 (12%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
AN R GP +++ + + G + V +W Q+ + +G G+I LL +
Sbjct: 39 SANIRSGPSTSSSIIGSVI-DGTQITVTGHQNDWWQV-NRNGQTGYIKAELLHVR----- 91
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
K + I + + P V + ++TI + S W +GW+
Sbjct: 92 ----GKVDADIGLKIRSGPGTNYARVGGLPNNAVVTIYDVSSNWYKVD----QGWVCADY 143
Query: 184 I 184
+
Sbjct: 144 V 144
>gi|153941155|ref|YP_001389869.1| cell wall-associated hydrolase [Clostridium botulinum F str.
Langeland]
gi|152937051|gb|ABS42549.1| cell wall-associated hydrolase [Clostridium botulinum F str.
Langeland]
Length = 798
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYDSKTAYV 321
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ +D +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YDSKTAYVSS 323
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINL-----------YKKPDIQSIIVAKVEPGVLLTIR 161
S +S + S + + + + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|170754435|ref|YP_001780152.1| putative peptidoglycan hydrolase [Clostridium botulinum B1 str.
Okra]
gi|169119647|gb|ACA43483.1| putative peptidoglycan hydrolase [Clostridium botulinum B1 str.
Okra]
Length = 766
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ +K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GASKNQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLASNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYDSKTAYV 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ +D +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLASNIIGS-LKHGSSVSILGKTGSWYKIK-YDSKTAYVSS 323
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S +S + + ++ +NL + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 19/50 (38%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGGASKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|168181443|ref|ZP_02616107.1| enterotoxin [Clostridium botulinum Bf]
gi|182675258|gb|EDT87219.1| enterotoxin [Clostridium botulinum Bf]
Length = 758
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + ++ ++K + V+ E W +I+ + IG+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAIIG-GVSKNQTLSVISESNGWSKIK-YGSGIGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSDIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSDIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINL-----------YKKPDIQSIIVAKVEPGVLLTIR 161
S +S + S N + + + + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNNSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S I+ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAIIGGVSKNQTLSVISESNGWSKIKYGSGIGYVSSKYLY 245
>gi|310658707|ref|YP_003936428.1| hypothetical protein CLOST_1403 [Clostridium sticklandii DSM 519]
gi|308825485|emb|CBH21523.1| exported protein of unknown function [Clostridium sticklandii]
Length = 292
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 17/167 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K S +FT +I I + ++ + P+ + R+ V
Sbjct: 1 MKKGWLLSCLFTTSIILSFPAIADANQYEKAVVESPI----------IDIRLDSNSNSAV 50
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ ++KG + +V E W +I+ G G+I S + V +N
Sbjct: 51 ISR-ISKGQEILIVGEENGWTKIKLGTGIEGFIESS------DSQVKKIEDGFITNKGVN 103
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + +S + + G + I E SG+W G++ I
Sbjct: 104 LRRNATTESEAIHILNTGDKVEIIEKSGQWTKVRLNSLIGYVHSDYI 150
>gi|237793833|ref|YP_002861385.1| putative peptidoglycan hydrolase [Clostridium botulinum Ba4 str.
657]
gi|229263653|gb|ACQ54686.1| putative peptidoglycan hydrolase [Clostridium botulinum Ba4 str.
657]
Length = 750
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + ++ ++K + V+ E W +I+ + IG+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAIIG-GVSKNQTLSVISESNGWSKIK-YGSGIGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSDIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSDIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINL-----------YKKPDIQSIIVAKVEPGVLLTIR 161
S +S + S N + + + + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNNSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S I+ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAIIGGVSKNQTLSVISESNGWSKIKYGSGIGYVSSKYLY 245
>gi|148378507|ref|YP_001253048.1| peptidoglycan hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153932683|ref|YP_001382895.1| NlpC/P60 family protein [Clostridium botulinum A str. ATCC 19397]
gi|153937339|ref|YP_001386461.1| NlpC/P60 family protein [Clostridium botulinum A str. Hall]
gi|148287991|emb|CAL82058.1| putative peptidoglycan hydrolase [Clostridium botulinum A str. ATCC
3502]
gi|152928727|gb|ABS34227.1| NlpC/P60 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152933253|gb|ABS38752.1| NlpC/P60 family protein [Clostridium botulinum A str. Hall]
Length = 718
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S +S + + ++ +NL + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNTSSNTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKTGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|322804787|emb|CBZ02340.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 772
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ S +
Sbjct: 367 RENPSLSSKVLG-GLSHGSSVDILDKTGSWYKVK-YGSKIGYVSSQFITTSNSSNNSGSS 424
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 425 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 484
Query: 179 IKKQKI 184
+ + I
Sbjct: 485 VYSKYI 490
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K + V+ E W +I+ + +G+++
Sbjct: 189 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTLSVISESNGWSKIK-YGSGVGYVS 246
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 247 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 306
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 307 SILGKTGSWYKIKYDSKTAYV 327
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ +D +++
Sbjct: 272 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YDSKTAYVSS 329
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S +S + + ++ +NL + P + S ++ + G + I
Sbjct: 330 SYISSSNDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 389
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 390 DKTGSWYKVKYGSKIGYVSSQFI 412
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 434 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 491
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 492 DTTQKVVAFNQIATQDKKY 510
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 202 LNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 251
>gi|313903224|ref|ZP_07836617.1| cell wall hydrolase/autolysin [Thermaerobacter subterraneus DSM
13965]
gi|313466535|gb|EFR62056.1| cell wall hydrolase/autolysin [Thermaerobacter subterraneus DSM
13965]
Length = 639
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+ +L + A + + P+P + + N R GPG + V+
Sbjct: 62 LRRALSILAVASLMVLVAGAGAGLRPAEAAGPVPARAIVTGTLLNVRSGPGTGFDVI-DR 120
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYIN 137
L +G V + + W +++ GT+GW+ ++ + +V P + + Y N
Sbjct: 121 LPEGTVVTLRTKQGGWFEVQAPSGTVGWVAGDYITADLTGVRIVVDPGHGGIDGGAYAN 179
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
R +N+ P ++ ++ G ++T+R G W T GW+ I
Sbjct: 97 RAIVTGTLLNVRSGPGTGFDVIDRLPEGTVVTLRTKQGGWFEVQAPSGTVGWVAGDYI 154
>gi|146296086|ref|YP_001179857.1| NLP/P60 protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409662|gb|ABP66666.1| NLP/P60 protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 318
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 24/166 (14%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ L +L ++ + F K N R P V+ + KG +V
Sbjct: 5 ALIGILMFLLLITWSSKGFAKTAE------ATVTVNIRNSPSTSSKVLGVF-PKGFKAQV 57
Query: 91 VKEYENWRQIRDFDGTIGWI---NKSLLSGKRSA-----------IVSPWNRKTNNPIYI 136
+ W +I FDG +G++ L ++ +VS T
Sbjct: 58 LSSTGGWVKIS-FDGVVGYVKSDYIKLTKDSSTSNAVKSSTNTRQVVSQMPMATVLKDNA 116
Query: 137 NLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYN-LDTEGWIK 180
+ S I+ ++ G + + W T G++
Sbjct: 117 RVRSNMSTSSKILKTLKKGSKVYVLARERNGWIKVKTLDGTVGYMA 162
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 19/57 (33%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +N+ P S ++ G + +G W G++K I
Sbjct: 25 KTAEATVTVNIRNSPSTSSKVLGVFPKGFKAQVLSSTGGWVKISFDGVVGYVKSDYI 81
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYEN 96
+ + ++ +++ + P T+ A R ++ L KG V V+ E
Sbjct: 92 AVKSSTNTRQVVSQMP---MATVLKDNARVRSNMSTSSKIL-KTLKKGSKVYVLARERNG 147
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
W +++ DGT+G++ LL S +R + Y
Sbjct: 148 WIKVKTLDGTVGYMAYYLLKMSTSHTTKISSRGGYDREAQVAYNG 192
>gi|312135616|ref|YP_004002954.1| nlp/p60 protein [Caldicellulosiruptor owensensis OL]
gi|311775667|gb|ADQ05154.1| NLP/P60 protein [Caldicellulosiruptor owensensis OL]
Length = 319
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 18/136 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSG 117
S N R P ++ + KG +V+ W +I +DG +G++ ++ +
Sbjct: 29 AKSTINIRSAPSTSSKILGVF-PKGFKAQVLSNAGGWVKIS-YDGIVGYVKSDYITITNE 86
Query: 118 KRSAIVSPWNRKTNN-----------PIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSG 165
KRS + + T L S I+ + G + +
Sbjct: 87 KRSTVSNTSRASTAKTTAKAAQATVLKDNARLRSDMSTSSKILKTFKSGSKVYVLSREQN 146
Query: 166 EWCFGYN-LDTEGWIK 180
W T G++
Sbjct: 147 GWVKVKTLDGTVGYMA 162
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P S I+ G + +G W G++K I
Sbjct: 25 QSAQAKSTINIRSAPSTSSKILGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLL 115
A R ++ T+ G V V+ +E W +++ DGT+G++ LL
Sbjct: 113 KDNARLRSDMSTSSKILKTF-KSGSKVYVLSREQNGWVKVKTLDGTVGYMAYYLL 166
>gi|229174342|ref|ZP_04301875.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
gi|228609199|gb|EEK66488.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
Length = 349
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
IK N R GP + +V+ L +G EV+ E + W + G WI
Sbjct: 229 AVIKGDNVNLRSGPSLQSSVI-RQLNRGESYEVLSEQDGWLAL----GGNEWIYYD---- 279
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S I T +NL P + ++ ++ G + WC
Sbjct: 280 -PSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHRGEAYRV------WCK 324
>gi|329943013|ref|ZP_08291787.1| bacterial SH3 domain protein [Chlamydophila psittaci Cal10]
gi|332287595|ref|YP_004422496.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|313848169|emb|CBY17170.1| conserved hypothetical exported protein [Chlamydophila psittaci
RD1]
gi|325506638|gb|ADZ18276.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|328814560|gb|EGF84550.1| bacterial SH3 domain protein [Chlamydophila psittaci Cal10]
Length = 408
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 69/164 (42%), Gaps = 19/164 (11%)
Query: 18 MPKILQNSLIFTL-----AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ ++ + AP + + ++ + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSVSLHAAPSTSKTPAAQVDKASFAPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ ++V L+KG V V+ E +++ + +G G++ ++ +
Sbjct: 61 VDSSIV-KELSKGDYVAVIGESKDYYIVAAPEGLKGYVFRTFV-----------LDNVIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLD 174
+N+ +P + ++A++ G + T + G+W +
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTEIQATSNQPQGKWLEIALPN 152
>gi|317476637|ref|ZP_07935882.1| NlpC/P60 family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907233|gb|EFV28942.1| NlpC/P60 family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 400
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 10/181 (5%)
Query: 10 YSLDLRKYMPKILQNSLIFTLAIYFYLAP----ILALSHEKEIFEKKPLPRFVTIKASRA 65
YS + M + + S A+ LA ++ + + I S A
Sbjct: 56 YSFAGKNVMLRGVTTSAEAKAALLQGLAKADYKVMDCIQVLPDVKGLEGKTYGIINVSVA 115
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P ++ L G+PV V++ + W I+ D I W+++ + A ++
Sbjct: 116 NLRAAPDFSSEMMTQGLM-GMPVHVLQR-DGWVHIQTPDNYIAWVHRVGVHLVNEAEMAA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
WN + + +Y KPD S ++ V G G + Y +G+I K
Sbjct: 174 WNNAEKIVVTAHYGFVYSKPDRTSQTISDVVAGNRFKWDGSKGAFYKVIYPDGRQGYISK 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|270296465|ref|ZP_06202665.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273869|gb|EFA19731.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 401
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ P ++ L G+PV V++ + W +I+ D I W+++ + ++
Sbjct: 116 NLRVAPDFSSEMMTQGLM-GMPVRVLQR-DGWYRIQTPDNYIAWVHRVGIHPVTREELTA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
WN + + +Y +P S V+ V G L G + Y +G+I K
Sbjct: 174 WNNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGAFYKVAYPDGRQGYISK 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|167749018|ref|ZP_02421145.1| hypothetical protein ANACAC_03799 [Anaerostipes caccae DSM 14662]
gi|167651640|gb|EDR95769.1| hypothetical protein ANACAC_03799 [Anaerostipes caccae DSM 14662]
Length = 382
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SG 117
+S N R P ++ + +G +VK+ W +++ D G++ L
Sbjct: 62 SSTLNIRKKPNTDSKILGK-MKRGALGTIVKKGTEWTKVKSGD-VTGYVKNDYLVFEDDI 119
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ A + + + +K + +V + +++ + +W G
Sbjct: 120 QAFAEKNIKKVAKVTTETLRVREKASKDADVVTLISEDETYKVKKQNSDWAKVKVDGETG 179
Query: 178 WIKKQKI 184
++ K +
Sbjct: 180 YVSKDYV 186
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + +N+ KKP+ S I+ K++ G L TI + EW + D G++K +
Sbjct: 57 AKVKSSSTLNIRKKPNTDSKILGKMKRGALGTIVKKGTEWTKVKSGDVTGYVKNDYL 113
>gi|313624233|gb|EFR94288.1| bifunctional autolysin [Listeria innocua FSL J1-023]
Length = 606
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 47 EIFEKKPLPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDF 103
F K P+ + + + AS N R P ++ T L V + + + ++ ++
Sbjct: 342 GYFSKTPVLQTYYS--ASEINLRSSPSWDSSIKGT-LPTNAKVVINNSTNTDGFYKV-NY 397
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+G IGW+ S S K + +NL K+ S I ++ G +
Sbjct: 398 NGLIGWMKLSYFSTKPT------LEDVYAMSDVNLRKEASWDSPIAFTIKEGDKGVLNNT 451
Query: 164 SG--EWCFGYNLDTEGWIKKQ 182
+G + GW+KK+
Sbjct: 452 TGKNGFYQVTVNGKVGWMKKE 472
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 21/144 (14%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN------WRQ 99
KE F KP+ + AS N R P +V + LPV N + Q
Sbjct: 471 KEYFANKPVLETL-YAASELNLRSKPDWDSSV-----SATLPVNTQVNLNNTTLTNGFYQ 524
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ +G +GW+ ++ S + INL + P S +V + G ++
Sbjct: 525 VT-ANGKVGWMKRNYFS------TTSVLETLYAADAINLRQSPTWDSPVVVNIPKGARVS 577
Query: 160 I--RECSGEWCFGYNLDTEGWIKK 181
+ + ++ GW+K+
Sbjct: 578 LNNTTLTNDFYQITYNGKTGWMKR 601
>gi|149198769|ref|ZP_01875812.1| N-acetylmuramoyl-L-alanine amidase [Lentisphaera araneosa HTCC2155]
gi|149138205|gb|EDM26615.1| N-acetylmuramoyl-L-alanine amidase [Lentisphaera araneosa HTCC2155]
Length = 413
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 13/125 (10%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+R N R P + + ++ + + VE++KE ++W QI + + WI +
Sbjct: 64 TNRLNVRARPSVRFEII-DRIKRDSKVEIIKETDDWLQIVAPEHSSAWIAAKHVD----- 117
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD-TEGWI 179
P + Y I+ + G + + W W+
Sbjct: 118 -----EEGKVKPKNVQAYAGAGIEFSPLGTAPVGARVEVLYRKNNTWLKIKAQPWMNAWV 172
Query: 180 KKQKI 184
KQ +
Sbjct: 173 SKQFV 177
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIK 180
IV + +N+ +P ++ I+ +++ + I + + +W + WI
Sbjct: 53 IVLERQQGVVITNRLNVRARPSVRFEIIDRIKRDSKVEIIKETDDWLQIVAPEHSSAWIA 112
Query: 181 KQKI 184
+ +
Sbjct: 113 AKHV 116
>gi|317472583|ref|ZP_07931902.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899992|gb|EFV21987.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 382
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SG 117
+S N R P ++ + +G +VK+ W +++ D G++ L
Sbjct: 62 SSTLNIRKKPNTDSKILGK-MKRGALGTIVKKGTEWTKVKSGD-VTGYVKNDYLVFEDDI 119
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ A + + + +K + +V + +++ + +W G
Sbjct: 120 QAFAEKNIKKVAKVTTETLRVREKASKDADVVTLISEDETYKVKKQNSDWAKVKVDGETG 179
Query: 178 WIKKQKI 184
++ K +
Sbjct: 180 YVSKDYV 186
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + +N+ KKP+ S I+ K++ G L TI + EW + D G++K +
Sbjct: 57 AKVKSSSTLNIRKKPNTDSKILGKMKRGALGTIVKKGTEWTKVKSGDVTGYVKNDYL 113
>gi|84499896|ref|ZP_00998162.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
gi|84391830|gb|EAQ04098.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
Length = 192
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 31 AIYFYLAPILALSHEKEI-------FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
A+ +L + + E + +P P + +R N R GPG +++V L+
Sbjct: 96 AVLASFGGVLETAPDPETLDPQPAVVKPEPAPDMREVSGNRVNMRNGPGTNHSIV-ARLS 154
Query: 84 KGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLSG 117
+G VEV+ E N W ++R D G +GW+ L++
Sbjct: 155 RGDSVEVLAEPGNGWLKLRVGDTGRVGWMADFLVTA 190
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 121 AIVSPWNR---KTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNL--D 174
A+V P + + +N+ P IVA++ G + + E W
Sbjct: 119 AVVKPEPAPDMREVSGNRVNMRNGPGTNHSIVARLSRGDSVEVLAEPGNGWLKLRVGDTG 178
Query: 175 TEGWIK 180
GW+
Sbjct: 179 RVGWMA 184
>gi|15618028|ref|NP_224312.1| hypothetical protein CPn0104 [Chlamydophila pneumoniae CWL029]
gi|15835640|ref|NP_300164.1| hypothetical protein CPj0104 [Chlamydophila pneumoniae J138]
gi|16752941|ref|NP_445212.1| hypothetical protein CP0670 [Chlamydophila pneumoniae AR39]
gi|33241439|ref|NP_876380.1| hypothetical protein CpB0104 [Chlamydophila pneumoniae TW-183]
gi|4376365|gb|AAD18257.1| CT017 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|7189585|gb|AAF38482.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978478|dbj|BAA98315.1| CT017 hypothetical protein [Chlamydophila pneumoniae J138]
gi|33235947|gb|AAP98037.1| hypothetical protein CpB0104 [Chlamydophila pneumoniae TW-183]
Length = 400
Score = 57.3 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 16/155 (10%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT--IKASRANSRIGPGIMYTV 77
++LQ S++ +P + + + + + LP T IK + R+ P T+
Sbjct: 2 RMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGTI 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +KG V V+ E +++ I G G++ +S + +N
Sbjct: 62 IREF-SKGDLVAVIGESKDYYVISAPPGITGYVFRSFV-----------LDNVVEGEQVN 109
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFG 170
+ +P + ++ ++ G + G+W
Sbjct: 110 VRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEV 144
>gi|164687402|ref|ZP_02211430.1| hypothetical protein CLOBAR_01043 [Clostridium bartlettii DSM
16795]
gi|164603176|gb|EDQ96641.1| hypothetical protein CLOBAR_01043 [Clostridium bartlettii DSM
16795]
Length = 461
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVT-IKASRANSRIGPGIMYTVVCTYLTKGLP 87
+A+ L I+ + ++ ++ +V+ + N R GP Y+++ + +KG
Sbjct: 9 LIALVISLTFIITIGFKEMVYADT----YVSGTVTASLNIRSGPSTSYSILGGF-SKGST 63
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+++V++ +W +++ + + G+++ ++ ++ N Y+N+ P
Sbjct: 64 IKIVEKNGDWLKVQ-YKTSYGYVSGKYVTSIYDDVI--DEGAVINCTYLNVRSGPSSSYS 120
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + I W + G++ K I
Sbjct: 121 SRGVIAKGQKVYIMGKESNWYEILYNGSAGYVSKTYI 157
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+N+ P I+ G + I E +G+W + G++ + + IY
Sbjct: 42 LNIRSGPSTSYSILGGFSKGSTIKIVEKNGDWLKVQYKTSYGYVSGKYVTSIYDD 96
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
T+ A N R P + L K V++V + +W +I
Sbjct: 211 TVTADALNVRQQPTTSSAKLGL-LYKNETVQIVDDTGSWYKI 251
>gi|319901761|ref|YP_004161489.1| NLP/P60 protein [Bacteroides helcogenes P 36-108]
gi|319416792|gb|ADV43903.1| NLP/P60 protein [Bacteroides helcogenes P 36-108]
Length = 401
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLS 116
I S AN R P ++ L G+P+ V++ + W +I+ D I W+++ ++
Sbjct: 111 INVSVANLRAEPDFSSEMMTQGLM-GMPIRVLQR-DGWYRIQTPDDYIAWVHRVGIHPVT 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
G+ A + + Y +Y +PD S V+ V G L G +
Sbjct: 169 GEELAAWNNAEKIVVTSHYGFVYSQPDQASQPVSDVVAGNRLKWDGAKGAFYKVTYPDGR 228
Query: 176 EGWIKKQ 182
G+I K
Sbjct: 229 RGYISKS 235
>gi|320162530|ref|YP_004175755.1| peptidase M23 family protein [Anaerolinea thermophila UNI-1]
gi|319996384|dbj|BAJ65155.1| peptidase M23 family protein [Anaerolinea thermophila UNI-1]
Length = 731
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 23/136 (16%)
Query: 66 NSRIGPGIMY------TVVCTYLTKGLPVEV---VKEYENWRQIRDFDGTIGWINKSLLS 116
N R P +T G P ++ V + W Q+R GT GW+ +
Sbjct: 428 NLREQPNTQANVRAGIPAGERLMTLGDPAQIQARVGKEGQWLQVRTAGGTTGWVAAWYV- 486
Query: 117 GKRSAIVSPWNRKTNNPI-YINLYKKPDIQSIIVAKVEPGVLLTIR----------ECSG 165
+R P + P+ +NL P ++A ++P LT+ G
Sbjct: 487 -QRVDQTQPPSDVVVYPVGAVNLRSGPGTGFDVIATLQPTDALTVLGTGDLARAKIGKQG 545
Query: 166 EWCFGY-NLDTEGWIK 180
EW G++
Sbjct: 546 EWLQVQTAQGQRGYVA 561
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 23/198 (11%)
Query: 4 HAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS 63
E+++ D + ++ + + +A + + + + +P V
Sbjct: 445 AGERLMTLGDPAQIQARVGKEGQWLQVRTAGGTTGWVAAWYVQRVDQTQPPSDVVVYPVG 504
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEV----------VKEYENWRQIRDFDGTIGWINKS 113
N R GPG + V+ T + V + + W Q++ G G++
Sbjct: 505 AVNLRSGPGTGFDVIATLQPTDA-LTVLGTGDLARAKIGKQGEWLQVQTAQGQRGYVAAW 563
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI----------REC 163
L+ A +P +N+ +P + + ++A G L +
Sbjct: 564 LVHLTGQA-PAPTGLVVYPLGALNVRARPALDANVLAVAVAGEALEVLGDRAEAQAKLGK 622
Query: 164 SGEWCFGYN-LDTEGWIK 180
GEW G++
Sbjct: 623 QGEWLNVRTPQKFVGYVA 640
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 27/149 (18%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK----------EYENWRQIRDFDGTIGWINKSL- 114
N R P + V+ + G +EV+ + W +R +G++ L
Sbjct: 586 NVRARPALDANVLAVAVA-GEALEVLGDRAEAQAKLGKQGEWLNVRTPQKFVGYVAAWLV 644
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----------C 163
++ K + +P + +NL +P + + V + G + E
Sbjct: 645 VAQKPTQPTAPETLLLKASVDLNLRAQPTLNAPRVGGIRTGETFRVLETDLTAAGAKVGK 704
Query: 164 SGEWCFGYN-LDTEGWIKKQKIWGIYPGE 191
+GEW +G N GW W + P E
Sbjct: 705 TGEWIYGENPQGVRGWAAA---WFLIPKE 730
>gi|317480348|ref|ZP_07939449.1| NlpC/P60 family protein [Bacteroides sp. 4_1_36]
gi|316903523|gb|EFV25376.1| NlpC/P60 family protein [Bacteroides sp. 4_1_36]
Length = 401
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ P ++ L G+PV V++ + W +I+ D I W+++ + ++
Sbjct: 116 NLRVAPDFSSEMMTQGLM-GMPVRVLQR-DGWYRIQTPDNYIAWVHRVGIHPVTREELTA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
W+ + + +Y +P S V+ V G L G + Y +G+I K
Sbjct: 174 WSNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGAFYKVAYPDGRQGYISK 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|226947747|ref|YP_002802838.1| NlpC/P60 family protein [Clostridium botulinum A2 str. Kyoto]
gi|226841687|gb|ACO84353.1| NlpC/P60 family protein [Clostridium botulinum A2 str. Kyoto]
Length = 774
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ + +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKAGSWYKVK-YGSKIGYVSSQFITTSNSSNNNGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINL-----------YKKPDIQSIIVAKVEPGVLLTIR 161
S +S + S + + + + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKAGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|168177854|ref|ZP_02612518.1| putative peptidoglycan hydrolase [Clostridium botulinum NCTC 2916]
gi|182670514|gb|EDT82488.1| putative peptidoglycan hydrolase [Clostridium botulinum NCTC 2916]
Length = 774
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ L+ G V+++ + +W +++ + IG+++ ++ S+ + +
Sbjct: 361 RENPSLSSKVLG-GLSHGSSVDILDKAGSWYKVK-YGSKIGYVSSQFITTSNSSNNNGSS 418
Query: 128 RKT---------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ K S +++ + G + I SGEW +T G+
Sbjct: 419 VTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 478
Query: 179 IKKQKI 184
+ + I
Sbjct: 479 VYSKYI 484
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K + V+ E W +I+ + +G+++
Sbjct: 183 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTLSVISESNGWSKIK-YGSGVGYVS 240
Query: 112 KSLLSGKRSAIVSPWN-------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L + + I S + +N+ +N+ ++ S I+ ++ G +
Sbjct: 241 SKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSV 300
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 301 SILGKTGSWYKIKYGSKTAYV 321
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + +S N R + ++ + L G V ++ + +W +I+ + +++
Sbjct: 266 PGFVKLSNSSSVLNVRSSANLSSNIIGS-LKHGSSVSILGKTGSWYKIK-YGSKTAYVSS 323
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S +S + + ++ +NL + P + S ++ + G + I
Sbjct: 324 SYISSSNDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDIL 383
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ +G W G++ Q I
Sbjct: 384 DKAGSWYKVKYGSKIGYVSSQFI 406
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 428 YLSDKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 485
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 486 DTTQKVVAFNQIATQDKKY 504
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V L++ S W G++ + ++
Sbjct: 196 LNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|22777706|dbj|BAC13978.1| N-acetylmuramoyl-L-alanine amidase (partial) [Oceanobacillus
iheyensis HTE831]
Length = 346
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 14/136 (10%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVE 89
I F L I + + R GPG Y + + P+
Sbjct: 9 TILFTLLSIFVFEQSVNADTAI-------VDGDGVHVRSGPGSEYDSIGNVNNGQSYPL- 60
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKKPDIQS 146
+++ +W +I D++G GW+++ ++ +R + N L P +
Sbjct: 61 -LQQQTDWVEI-DYNGESGWVSQEYINIERVEQEYAEIDSESVDTVYNNTHLRSGPSVND 118
Query: 147 IIVAKVEPGVLLTIRE 162
I+A V+ G L I
Sbjct: 119 AIIAYVDQGTTLAIVR 134
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +++ P + + V G + + +W GW+ ++ I
Sbjct: 26 ADTAIVDGDGVHVRSGPGSEYDSIGNVNNGQSYPLLQQQTDWVEIDYNGESGWVSQEYI 84
>gi|18310213|ref|NP_562147.1| surface protein [Clostridium perfringens str. 13]
gi|18144892|dbj|BAB80937.1| probable surface protein [Clostridium perfringens str. 13]
gi|280985793|gb|ADA00360.1| N-acetylglucosaminidase [Clostridium perfringens str. 13]
Length = 1129
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 477 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDIKDE 534
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + + +N+ + S ++ + + I G +
Sbjct: 535 VVTEPEKPSAPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKI 594
Query: 171 YNLDTEGWIKKQKI 184
+ G++ K+ I
Sbjct: 595 EYKGSHGYVAKEYI 608
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R G G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 307 SSSLNVREGAGTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 364
Query: 116 SGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S +P T +N+ + S ++ + + I G
Sbjct: 365 SNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEG 424
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 425 AFYKIEYKGSHGYVAKEYI 443
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-- 119
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 642 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 699
Query: 120 --------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + N +N+ + S ++ + +TI G
Sbjct: 700 NNSNQGTQTPEKPSTPESAEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKITIVGEEG 759
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 760 AFYKIEYKGSHGYVAKEYI 778
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDIGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + G V ++ + ++W ++ +DF G + + +L + ++
Sbjct: 61 GADSSHEII-TSIPSGARVNIIDKMSKDWYKVSYKDFTGYLQAKDIRVLGDE----LNQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|218130144|ref|ZP_03458948.1| hypothetical protein BACEGG_01732 [Bacteroides eggerthii DSM 20697]
gi|217987648|gb|EEC53976.1| hypothetical protein BACEGG_01732 [Bacteroides eggerthii DSM 20697]
Length = 400
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 10/181 (5%)
Query: 10 YSLDLRKYMPKILQNSLIFTLAIYFYLAP----ILALSHEKEIFEKKPLPRFVTIKASRA 65
YS + M + + S A+ LA ++ + + I S A
Sbjct: 56 YSFAGKNVMLRGVTTSAEAKAALLQGLAKADYKVMDCIQVLPDVKGLEGKTYGIINVSVA 115
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P ++ L G+PV V++ + W I+ D I W+++ + A ++
Sbjct: 116 NLRAAPDFSSEMMTQGLM-GMPVHVLQR-DGWIHIQTPDNYIAWVHRVGVHLVNEAEMAA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
WN + + +Y KPD S ++ V G G + Y +G+I K
Sbjct: 174 WNNAEKIVVTAHYGFVYSKPDRTSQTISDVVAGNRFKWDGSKGAFYKVIYPDGRQGYISK 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|304310654|ref|YP_003810252.1| SH3 domain protein [gamma proteobacterium HdN1]
gi|301796387|emb|CBL44595.1| SH3 domain protein [gamma proteobacterium HdN1]
Length = 224
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+F+ AI + +H + L R + R GP + ++ ++ G
Sbjct: 7 LFSCAILAISLGLSQAAHADTQYVNDML---------RVDMRAGPTNTHKII-DFIKSGT 56
Query: 87 PVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSA 121
PV V+ + W Q+ +G GWI L+ +R A
Sbjct: 57 PVNVISQSPDGVWYQVE-ANGKQGWIQAQYLTHERVA 92
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
N+ + +++ P I+ ++ G + + S + W +GWI+ Q +
Sbjct: 30 VNDMLRVDMRAGPTNTHKIIDFIKSGTPVNVISQSPDGVWYQVEANGKQGWIQAQYL 86
>gi|120437653|ref|YP_863339.1| NlpC/P60 family protein [Gramella forsetii KT0803]
gi|117579803|emb|CAL68272.1| NlpC/P60 family protein [Gramella forsetii KT0803]
Length = 407
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+K S AN R P + T T G+P++V K+ W I+ DG +GW++ ++ K
Sbjct: 109 VKISVANLRDEP-KHSAQLVTQATLGMPLKVYKKQGGWYYIQTPDGYLGWVDYGGIANKT 167
Query: 120 SAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDT 175
S W + + ++KPD S V + G +L + + Y
Sbjct: 168 KEEFSEWKSSEKLIYLKPFGSSHEKPDNNSQSVTDLVAGDILELLSEENGFFKAIYPDGR 227
Query: 176 EGWIKKQK 183
E +I K +
Sbjct: 228 EAFIAKAE 235
>gi|160891869|ref|ZP_02072872.1| hypothetical protein BACUNI_04326 [Bacteroides uniformis ATCC 8492]
gi|156858347|gb|EDO51778.1| hypothetical protein BACUNI_04326 [Bacteroides uniformis ATCC 8492]
Length = 423
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ P ++ L G+PV V++ + W +I+ D I W+++ + ++
Sbjct: 138 NLRVAPDFSSEMMTQGLM-GMPVRVLQR-DGWYRIQTPDNYIAWVHRVGIHPVTREELTA 195
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
W+ + + +Y +P S V+ V G L G + Y +G+I K
Sbjct: 196 WSNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGAFYKVAYPDGRQGYISK 255
Query: 182 Q 182
Sbjct: 256 S 256
>gi|168213091|ref|ZP_02638716.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
CPE str. F4969]
gi|170715384|gb|EDT27566.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
CPE str. F4969]
Length = 1044
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 477 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDIKDE 534
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + + +N+ + S ++ + + I G +
Sbjct: 535 VVTEPEKPSAPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKI 594
Query: 171 YNLDTEGWIKKQKI 184
+ G++ K+ +
Sbjct: 595 EYKGSHGYVAKEYV 608
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R G G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 307 SSSLNVREGAGTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 364
Query: 116 SGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S +P T +N+ + S ++ + + I G
Sbjct: 365 SNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEG 424
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 425 AFYKIEYKGSHGYVAKEYI 443
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDIGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + G V ++ + ++W ++ +DF G + + +L + ++
Sbjct: 61 GADSSHEII-TSIPSGARVNIIDKMSKDWYKVSYKDFTGYLQAKDIRVLGDE----LNQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|313835019|gb|EFS72733.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA2]
Length = 247
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 17/175 (9%)
Query: 19 PKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
PK T+A+ +AP + S + + N R
Sbjct: 11 PKRSVRGAAATIALTSGISVVAPAILGSVAHAANTQT------MYATTDVNVRSA-SSNS 63
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKT 130
V T +G V+V + W + +GT GWI + L+ + V
Sbjct: 64 GKVLTVAARGQSVKVTGKKARGWVPV-AVNGTTGWIYERFLTEENVHPVHFGSEALPGTM 122
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ I+ E G + + W GWI + +
Sbjct: 123 TAAVPVNVRGDAANAGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYL 177
>gi|164687087|ref|ZP_02211115.1| hypothetical protein CLOBAR_00713 [Clostridium bartlettii DSM
16795]
gi|164603972|gb|EDQ97437.1| hypothetical protein CLOBAR_00713 [Clostridium bartlettii DSM
16795]
Length = 262
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 26/188 (13%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE--------IFEKKPLPRFVTIKAS 63
+ ++KYM L + +A+ L P+ A+++ + + + + S
Sbjct: 1 MKMKKYMAMGLGAIMAVGIAVSGVL-PVSAVNNNENDAKLATAVTMAARDYDDYEGVIKS 59
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRS 120
R + T L KG VEV ++ W ++ RD +G +S K
Sbjct: 60 NTTLRSKATSNSRKITT-LKKGAVVEVERKASNGWYRVEYRDIEG--------YVSPKNI 110
Query: 121 AIVSPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDT 175
I R + N+ S V ++ G ++ I + S W
Sbjct: 111 KIYDSEYRDIEKKGTVTSNVNMRLGASTLSKKVTYLKKGTVIKIESKTSNGWYKIEYKGR 170
Query: 176 EGWIKKQK 183
+G+I ++
Sbjct: 171 DGYISQKH 178
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSL------ 114
S N R+G + V TYL KG +++ + W +I + G G+I++
Sbjct: 127 TSNVNMRLGASTLSKKV-TYLKKGTVIKIESKTSNGWYKIE-YKGRDGYISQKHAKIGTN 184
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNL 173
+ K + + L + P S + + G + + + S +
Sbjct: 185 TNKKDYTYREIDDYDGITTAKLTLRRSPSSSSTKITSIPKGARVEVEGKTSNGFYRVEYR 244
Query: 174 DTEGWIKKQKI 184
D EG++ + I
Sbjct: 245 DIEGYVSSKYI 255
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
L K S + ++ G ++ + R+ S W D EG++ + I
Sbjct: 58 KSNTTLRSKATSNSRKITTLKKGAVVEVERKASNGWYRVEYRDIEGYVSPKNI 110
>gi|255101906|ref|ZP_05330883.1| cell surface protein [Clostridium difficile QCD-63q42]
Length = 475
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+VT + N R I +V+ YL G VEV+ W +I+ +G IG+++ S L
Sbjct: 341 YVT-NTDKVNIRNDATIEASVIG-YLNNGDEVEVLDVLKTGWVKIKYNEG-IGYVSGSYL 397
Query: 116 SGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN 172
+ + ++ + + +N+ K P + + + G + E + W
Sbjct: 398 TNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKY 457
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 458 NGGYGYVSNDYL 469
>gi|126700350|ref|YP_001089247.1| cell surface protein [Clostridium difficile 630]
gi|255307775|ref|ZP_05351946.1| cell surface protein [Clostridium difficile ATCC 43255]
gi|115251787|emb|CAJ69622.1| putative cell wall-binding protein [Clostridium difficile]
Length = 475
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+VT + N R I +V+ YL G VEV+ W +I+ +G IG+++ S L
Sbjct: 341 YVT-NTDKVNIRNDATIEASVIG-YLNNGDEVEVLDVLKTGWVKIKYNEG-IGYVSGSYL 397
Query: 116 SGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN 172
+ + ++ + + +N+ K P + + + G + E + W
Sbjct: 398 TNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKY 457
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 458 NGGYGYVSNDYL 469
>gi|260684310|ref|YP_003215595.1| cell surface protein [Clostridium difficile CD196]
gi|260687969|ref|YP_003219103.1| cell surface protein [Clostridium difficile R20291]
gi|260210473|emb|CBA64941.1| cell surface protein [Clostridium difficile CD196]
gi|260213986|emb|CBE06094.1| cell surface protein [Clostridium difficile R20291]
Length = 501
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+VT + N R I +V+ YL G VEV+ W +I+ +G IG+++ S L
Sbjct: 367 YVT-NTDKVNIRNDATIEASVIG-YLNNGDEVEVLDVLKTGWVKIKYNEG-IGYVSGSYL 423
Query: 116 SGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN 172
+ + ++ + + +N+ K P + + + G + E + W
Sbjct: 424 TNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEIFATGWVKIKY 483
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 484 NGGYGYVSNDYL 495
>gi|254976330|ref|ZP_05272802.1| cell surface protein [Clostridium difficile QCD-66c26]
gi|255093715|ref|ZP_05323193.1| cell surface protein [Clostridium difficile CIP 107932]
gi|255315467|ref|ZP_05357050.1| cell surface protein [Clostridium difficile QCD-76w55]
gi|255518130|ref|ZP_05385806.1| cell surface protein [Clostridium difficile QCD-97b34]
gi|306521090|ref|ZP_07407437.1| cell surface protein [Clostridium difficile QCD-32g58]
Length = 475
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+VT + N R I +V+ YL G VEV+ W +I+ +G IG+++ S L
Sbjct: 341 YVT-NTDKVNIRNDATIEASVIG-YLNNGDEVEVLDVLKTGWVKIKYNEG-IGYVSGSYL 397
Query: 116 SGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN 172
+ + ++ + + +N+ K P + + + G + E + W
Sbjct: 398 TNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEIFATGWVKIKY 457
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 458 NGGYGYVSNDYL 469
>gi|154483108|ref|ZP_02025556.1| hypothetical protein EUBVEN_00809 [Eubacterium ventriosum ATCC
27560]
gi|149735916|gb|EDM51802.1| hypothetical protein EUBVEN_00809 [Eubacterium ventriosum ATCC
27560]
Length = 464
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 11/150 (7%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYEN-WR 98
A S E ++F + + N R P VV Y G +++++ N W
Sbjct: 91 ATSSEDKLFANIAITKVSGGAEDYVNVRKKPTTESKVVGKIYNNSG--AKILEKTNNGWY 148
Query: 99 QIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+I G+I S +S + + I++ + S +V V
Sbjct: 149 KIV-SGNCTGYIKSDFFVTGSSAKSRALDNGYVQAEAKDAIHVRAEASTNSKVVTNVYKN 207
Query: 156 VLLTIRE--CSGEWCFGYNL-DTEGWIKKQ 182
TI++ +GEW GWI Q
Sbjct: 208 ETYTIKKFDKTGEWIKVKIKAGVSGWISAQ 237
>gi|228997979|ref|ZP_04157580.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
gi|229005530|ref|ZP_04163242.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228755717|gb|EEM05050.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228761712|gb|EEM10657.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
Length = 382
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
T+A+ L I + + K + +K + ++
Sbjct: 10 AATVAVTSLLPSITEADMKTAAVQPKNNVKIGYVKLDKVQL-YQENTTNGDSLGSISYNT 68
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PV +++ +W ++ + IG+I KS LS + + N+ N +NL +P IQS
Sbjct: 69 PVTILETTRDWYKV-NAQNKIGYIQKSNLS--LTKLNQQRNQHIVNASALNLRSEPSIQS 125
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G ++++E +W G++KK+ +
Sbjct: 126 SILDVLPNGTFISVQETLNDWYLISYNGKIGYVKKEFV 163
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R P I +++ L G + V + +W I ++G IG++ K +S
Sbjct: 110 VNASALNLRSEPSIQSSIL-DVLPNGTFISVQETLNDWYLIS-YNGKIGYVKKEFVSHNS 167
Query: 120 SAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
V + N+ + + + ++ ++ G + + G W
Sbjct: 168 QPFVKGITIQNNSYYVATPKLRVRNGAGTNTAVIGSLQNGTQIQVVGTVGTWYKIRFGSG 227
Query: 176 EGWIKKQKI 184
G++ KQ +
Sbjct: 228 YGYVAKQYV 236
>gi|163740200|ref|ZP_02147594.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
gi|161386058|gb|EDQ10433.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
Length = 233
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIR-DFDGTIGWINKSLLS 116
+I A+R N R GPG +Y +V L+ G V V ++ W +R DG +GWI SL+S
Sbjct: 171 SITATRVNMRSGPGTVYPIV-DRLSNGEEVAVFEDIGTGWLHLRTLKDGKVGWIAASLVS 229
Query: 117 GKR 119
KR
Sbjct: 230 QKR 232
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWC 168
I ++ + + + + ++ +N+ P IV ++ G + + W
Sbjct: 151 IQAAIETDPQEIVEPDADIRSITATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTGWL 210
Query: 169 FGYN--LDTEGWIKKQKI 184
GWI +
Sbjct: 211 HLRTLKDGKVGWIAASLV 228
>gi|291542529|emb|CBL15639.1| SH3 domain protein [Ruminococcus bromii L2-63]
Length = 831
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 18/188 (9%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT------IKASRA 65
+ +K +I+ L+ +A+ I A S + + V+ I AS
Sbjct: 1 MKKQKLFVRIVCIVLVVLMAVSVGAVAITAFS-ANAAQSTEEVSASVSAGASGYINASYV 59
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEY---ENWRQIRD-FDGTIGWINKSLLSGKRSA 121
N R G G Y+V+ T + K V W +I+ + G++ K S+
Sbjct: 60 NLRSGAGTNYSVI-TCMAKNTKFTFVDGKLYNSKWYKIKLKSNSKTGYVTKEY-VAVSSS 117
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDT--E 176
+ + Y+NL +V + LT + W T
Sbjct: 118 ATASSVTGYVSDDYVNLRSGAGTNYSVVGCLRKNTKLTFVSTSLYNSAWYKVKVTSTAKT 177
Query: 177 GWIKKQKI 184
G+IKK +
Sbjct: 178 GYIKKDYV 185
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE---NWRQIRDFDGTIGWINKSLL 115
T+ S N R G G Y+VV T + G ++ V NW +++ +GT G+I+K +
Sbjct: 699 TVTGSDVNLRRGAGTNYSVV-TRMNYGTKLKFVDGKRYNTNWYKVKLSNGTTGYIHKDYV 757
Query: 116 SGK 118
S
Sbjct: 758 SAS 760
>gi|303239328|ref|ZP_07325856.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
gi|302593114|gb|EFL62834.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
Length = 358
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
I N R GPG Y V+C + KG VE+++ W I+ G GW+ + +
Sbjct: 158 IDGDDVNVREGPGKNYGVICQ-VDKGEKVEILESAPEWYHIKTSSGVNGWVYSTYV 212
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+++ S K + V+ + + +N+ + P ++ +V+ G + I E + EW
Sbjct: 138 AENVTSSKETETVAVVIKGIIDGDDVNVREGPGKNYGVICQVDKGEKVEILESAPEWYHI 197
Query: 171 Y-NLDTEGWIKKQKI 184
+ GW+ +
Sbjct: 198 KTSSGVNGWVYSTYV 212
>gi|255280572|ref|ZP_05345127.1| cell wall-associated hydrolase [Bryantella formatexigens DSM 14469]
gi|255269037|gb|EET62242.1| cell wall-associated hydrolase [Bryantella formatexigens DSM 14469]
Length = 513
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 6/126 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R P +V ++ E W I+ G++ K LL+ +A
Sbjct: 100 SYINIRTEPSTESDIVGKLYDCNA-ATILGEEGEWYLIQ-SGNCQGYVAKYLLTTGEAAA 157
Query: 123 VSPWNRKTN----NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
T N + + + ++ V ++ + E G W + G+
Sbjct: 158 QVVAEVGTPVAQVNAEALMVRADASTDADVIDMVTANEIVYLEEDLGGWAKVSTENGTGY 217
Query: 179 IKKQKI 184
+ +
Sbjct: 218 VSADYV 223
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +T YIN+ +P +S IV K+ TI GEW + + +G++
Sbjct: 86 SLVNTIAVAQTGEDSYINIRTEPSTESDIVGKLYDCNAATILGEEGEWYLIQSGNCQGYV 145
Query: 180 KKQKI 184
K +
Sbjct: 146 AKYLL 150
>gi|229191055|ref|ZP_04318045.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228592453|gb|EEK50282.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 510
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 28/170 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + A F L + + + I A N R P V
Sbjct: 1 MEANMKKVIGAATATIFGLGAFTSTATAETIVT-----------ADVLNVREKPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V + G ++V+ + W +I L+GK + S + +
Sbjct: 50 V-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFVSSEFTKDVYHVTANL 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + S I+ +++ V+ + + W + +
Sbjct: 96 LNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 145
>gi|29840426|ref|NP_829532.1| hypothetical protein CCA00668 [Chlamydophila caviae GPIC]
gi|29834775|gb|AAP05410.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 409
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 18 MPKILQNSLIFTL-----AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ + AP + + ++ + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSASLLAAPSTSTTSVAQMDKSSFAPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ +++ L+KG + V+ E +++ + +G G++ ++ +
Sbjct: 61 VDSSII-KELSKGDYIAVIGESKDYYIVAAPEGLKGYVFRTFV-----------LDNVIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFG 170
+N+ +P + ++A++ G + T + G+W
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTQIEATPIQQQGKWLEI 148
>gi|229174375|ref|ZP_04301907.1| 3D domain protein [Bacillus cereus MM3]
gi|228608935|gb|EEK66225.1| 3D domain protein [Bacillus cereus MM3]
Length = 310
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWAKIKL-NGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
P +N+ + S I+ K+ G V+ T + EW G+
Sbjct: 86 YV----------TPGVLNVRAGANTDSEILGKLNKGDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHMPFLTGTAP 146
>gi|219847898|ref|YP_002462331.1| SH3 type 3 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219542157|gb|ACL23895.1| SH3 type 3 domain protein [Chloroflexus aggregans DSM 9485]
Length = 413
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 62 ASRANSRIGPGIM-YTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGK 118
+ N R P Y V+ + G V+++ N W +R +GW++ SLL+
Sbjct: 271 TNGGNVRKLPFTGVYNVIG-GVNAGEQVQIIARTPNALWYYVRTVRDEVGWVSASLLAVT 329
Query: 119 R-SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG-YNLD 174
A +P + +Y D S + +VE ++ + E + + W +
Sbjct: 330 DLIAAETPVANMVTVFVSGPIYLAADPASTQIDRVERNEVVELLERTADGMWYKVLNVRE 389
Query: 175 TEGWIKKQKI 184
EGW++ +
Sbjct: 390 REGWVQASLL 399
>gi|187777599|ref|ZP_02994072.1| hypothetical protein CLOSPO_01191 [Clostridium sporogenes ATCC
15579]
gi|187774527|gb|EDU38329.1| hypothetical protein CLOSPO_01191 [Clostridium sporogenes ATCC
15579]
Length = 776
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + ++ L+ G V+++ + +W +I+ + IG+++ ++ S+ S +
Sbjct: 369 RDNPSLSSKILG-GLSHGSSVDILGKTGSWYKIK-YGSKIGYVSSQFITTSNSSNSSGSS 426
Query: 128 RK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N +N+ K S +++ + G + I SGEW +T G+
Sbjct: 427 VTNQKFGTVYLSNKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGY 486
Query: 179 IKKQKI 184
+ + I
Sbjct: 487 VYSKYI 492
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 57/141 (40%), Gaps = 20/141 (14%)
Query: 57 FVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ IK S+ N R P + V+ ++K V ++ E W +I+ + IG+++
Sbjct: 191 YTIIKTSKVSCSSLNVRSNPSLSSAVIG-GVSKNQTVSIISESNGWSKIK-YGSGIGYVS 248
Query: 112 KSLL-SGKRSA------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
L +G + + + + +N+ +N+ ++ S I+ ++ G +
Sbjct: 249 SQYLYAGNNTINSGNGGSSSNESVQPGFVKLSNSSSLLNVRSSANLSSSIIGSLKNGSSV 308
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
+I +G W ++
Sbjct: 309 SILGKTGSWYKIKYGSKVAYV 329
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 55 PRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P FV + S N R + +++ + L G V ++ + +W +I+ + + +++
Sbjct: 274 PGFVKLSNSSSLLNVRSSANLSSSIIGS-LKNGSSVSILGKTGSWYKIK-YGSKVAYVSS 331
Query: 113 SLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ +S ++ + ++ +NL P + S I+ + G + I
Sbjct: 332 NYISSSNNSNSNSDNNSSTSTGKGTVKLSSTSSSLNLRDNPSLSSKILGGLSHGSSVDIL 391
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+G W G++ Q I
Sbjct: 392 GKTGSWYKIKYGSKIGYVSSQFI 414
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+++ K S N R G +V+ + L G VE++ W +I +F T G++ +
Sbjct: 436 YLSNKYSTLNVRKNAGTNSSVISS-LAYGSKVEILSSSGEWYKI-NFKNTTGYVYSKYIK 493
Query: 117 GKRSAIVSPWNRKTNNPIY 135
+V+ T + Y
Sbjct: 494 DTAQKVVAFNQSATQDKKY 512
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 20/50 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ P + S ++ V ++I S W G++ Q ++
Sbjct: 204 LNVRSNPSLSSAVIGGVSKNQTVSIISESNGWSKIKYGSGIGYVSSQYLY 253
>gi|224535448|ref|ZP_03675987.1| hypothetical protein BACCELL_00310 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522914|gb|EEF92019.1| hypothetical protein BACCELL_00310 [Bacteroides cellulosilyticus
DSM 14838]
Length = 400
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I S +N R+ P ++ L G+PV V++ + W +I+ D I WI++ +
Sbjct: 110 INVSVSNLRVDPDFSSEMMTQGLM-GMPVRVLQR-DGWYRIQTPDNYIAWIHRVGIHPVT 167
Query: 120 SAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDT 175
+ WN + + +Y +P+ S V+ V G L GE+ Y
Sbjct: 168 KEELHAWNTAEKIVVTSHYGFVYSEPNQSSQTVSDVVAGNRLKWEGTKGEFYKVAYPDGR 227
Query: 176 EGWIKKQ 182
G+I K
Sbjct: 228 TGYISKS 234
>gi|311746265|ref|ZP_07720050.1| putative N-acetylmuramoyl-L-alanine amidase [Algoriphagus sp. PR1]
gi|126576498|gb|EAZ80776.1| putative N-acetylmuramoyl-L-alanine amidase [Algoriphagus sp. PR1]
Length = 329
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 14/155 (9%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT--KGLPVE 89
+ F + + + ++V + AS N R+GP + G +
Sbjct: 184 VNFLPLVAAQIGDRPTPRPPQAIQKYVAVTASALNVRVGPAGSAALASDRNAVLMGGILR 243
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ E W +I + W+ + A V N + + P Q IV
Sbjct: 244 IYDEANGWLKI--SNSQSHWVYGRYTVDVKRATV--------NANVLRVRSGPGTQYSIV 293
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + I E WC W+ K +
Sbjct: 294 DNLMEQEEVFISEEHQGWCKISLEQK--WLSKDFL 326
>gi|229824081|ref|ZP_04450150.1| hypothetical protein GCWU000282_01385 [Catonella morbi ATCC 51271]
gi|229786435|gb|EEP22549.1| hypothetical protein GCWU000282_01385 [Catonella morbi ATCC 51271]
Length = 458
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+TI+ + R P + ++K V V+K+ ENW +R GW+ + LL
Sbjct: 42 LTIQNASVTLRQAPDTNSKAISA-ISKDQVVHVIKKEENWLNVRYRQ-REGWLPQWLLDQ 99
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S Y++ S + + G + S W + G
Sbjct: 100 --PSLSSDQGLTAQVKKTTPFYQRASTSSAKIRDLTEGYQYDVVSESKGWTELIVNNQPG 157
Query: 178 WIKKQKI 184
++ +
Sbjct: 158 YVATADL 164
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 24/62 (38%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V ++ T + L + PD S ++ + ++ + + W EGW+ +
Sbjct: 36 VQTSSQLTIQNASVTLRQAPDTNSKAISAISKDQVVHVIKKEENWLNVRYRQREGWLPQW 95
Query: 183 KI 184
+
Sbjct: 96 LL 97
>gi|229012221|ref|ZP_04169399.1| 3D domain protein [Bacillus mycoides DSM 2048]
gi|228749064|gb|EEL98911.1| 3D domain protein [Bacillus mycoides DSM 2048]
Length = 517
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 48/151 (31%), Gaps = 14/151 (9%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ A F + + + A N R P +V + +G ++V+
Sbjct: 19 IIGAATATVLGLGAFTTSAIAETI-VTADVLNVREKPTTESKIV-EKVKEGQKLKVIHTE 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-E 153
E W +I D +G +++ +N+ + + +S I+ ++ +
Sbjct: 77 EGWSKI-DLNGKELFVSSEYTKDIYHV----------TANLLNVRTEANTESEILGRLKQ 125
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V+ + + W + +
Sbjct: 126 DDVIESTHQVKDGWLQFEYKGKTAYANVSFL 156
>gi|163816071|ref|ZP_02207441.1| hypothetical protein COPEUT_02251 [Coprococcus eutactus ATCC 27759]
gi|158448881|gb|EDP25876.1| hypothetical protein COPEUT_02251 [Coprococcus eutactus ATCC 27759]
Length = 479
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 7/134 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R + + N R GI VV G+ +VV++ + W ++ +G+I LL
Sbjct: 114 RCIAVTDDYVNIRSAAGIDSDVVGIIGNAGV-ADVVEKGKEWTKVS-SGNCVGYIRNDLL 171
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
A + T N +N+ ++ D + + +V G I + +W
Sbjct: 172 LYGDDAGEYAEANCSKMATVNTETLNVREQADTSADCITQVGAGQSFDILSQTDKWVQIA 231
Query: 172 NLDTE-GWIKKQKI 184
D G++ I
Sbjct: 232 LDDQTSGYVSADYI 245
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ-KIWGIYPG 190
Y+N+ I S +V + + + E EW + + G+I+ ++G G
Sbjct: 119 TDDYVNIRSAAGIDSDVVGIIGNAGVADVVEKGKEWTKVSSGNCVGYIRNDLLLYGDDAG 178
Query: 191 E 191
E
Sbjct: 179 E 179
>gi|75764241|ref|ZP_00743795.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74488270|gb|EAO51932.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 438
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 28/170 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ + A F L + + + I A N R P V
Sbjct: 1 MEANMKKVIGAATATIFGLGAFTSTATAETIVT-----------ADVLNVREKPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V + G ++V+ + W +I L+GK + S + +
Sbjct: 50 V-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFVSSEFTKDVYHVTANL 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + +S I+ +++ V+ + + W + +
Sbjct: 96 LNVRTEANTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 145
>gi|301057693|ref|ZP_07198766.1| bacterial SH3 domain protein [delta proteobacterium NaphS2]
gi|300448154|gb|EFK11846.1| bacterial SH3 domain protein [delta proteobacterium NaphS2]
Length = 376
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 19/129 (14%)
Query: 42 LSHEKEIFEKKPLPRF-----------VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+H K+ +P R +T+K + N R GP + V+ +++G ++V
Sbjct: 161 SAHTKQTLSPEPPARMGPQTDENGLKELTVKVVKGNVRRGPSLKDAVLFR-ISRGDKLQV 219
Query: 91 VKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYK---KPDI 144
+ + +W +R D GW ++ L S S ++ + + PD
Sbjct: 220 IDQKGDWYAVRIDDERSGWAHRVLFETSSATPEKTASATFKRDGKGVIQKIRAVVTDPD- 278
Query: 145 QSIIVAKVE 153
+ I+ ++
Sbjct: 279 HAQIIFELN 287
Score = 41.5 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKK 181
N+ + P ++ ++ ++ G L + + G+W D GW +
Sbjct: 196 NVRRGPSLKDAVLFRISRGDKLQVIDQKGDWYAVRIDDERSGWAHR 241
>gi|229036537|ref|ZP_04189411.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1271]
gi|228727814|gb|EEL78916.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1271]
Length = 363
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
IK N R GP + +V+ L +G EV+ E +W + G WI
Sbjct: 243 AVIKGDNVNLRSGPSLQSSVI-RQLNRGESYEVLNEQGSWLAL----GGNEWIYYD---- 293
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S I T +NL P + ++ ++ G + WC
Sbjct: 294 -PSYIQYKHYVATITGDNVNLRDAPSLTGNVIRQLHHGEAYRV------WCK 338
>gi|23100540|ref|NP_694007.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
HTE831]
gi|22778773|dbj|BAC15041.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
HTE831]
Length = 379
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 19/175 (10%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ S+I + + +P + ++ + +E + +S N R P
Sbjct: 1 MKRKTSIATLFSMILIVMFSYLFSPAITHANGTDTYE---------VSSSTLNIRSAPSN 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK---- 129
++V ++ KG + KE +W Q + G W+ K L ++ VS +
Sbjct: 52 ESSIVGQFV-KGNQLTTFKEQYDWVQTY-YGGKEVWVAKHHLVPVSTSNVSSTTSEMKEN 109
Query: 130 ---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
T + + G + G+W GWI
Sbjct: 110 ISVTVAAESVMIRAGAGTNYKNTHSAYQGDEFDVISSQGDWYQVKLPNGETGWIA 164
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ A R G G Y +G +V+ +W Q++ +G GWI L +
Sbjct: 112 VTVAAESVMIRAGAGTNYK-NTHSAYQGDEFDVISSQGDWYQVKLPNGETGWIASWLTTE 170
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ ++N + + S
Sbjct: 171 VGGVVSESTASDSSNSESVTNAPEQQPASS 200
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +S IV + G LT + +W Y E W+ K +
Sbjct: 42 TLNIRSAPSNESSIVGQFVKGNQLTTFKEQYDWVQTYYGGKEVWVAKHHL 91
>gi|284048994|ref|YP_003399333.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283953215|gb|ADB48018.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 610
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 17/135 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINK--- 112
I S R G G+ V+ + ++G VEV+ W ++ DG+ G++
Sbjct: 476 ITGSDVRMRDGAGLDSGVIGVF-SQGESVEVLGSTRADGMTWYKVSRSDGSTGYVAADYC 534
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGE--WC 168
SL +G S+ T + + S ++ + G +TI + SG W
Sbjct: 535 SLGNGDSSS----SPTGTITGTDVRMRASYSTDSDVLGYFDNGETVTILDDVTSGGQRWL 590
Query: 169 FG-YNLDTEGWIKKQ 182
+ + GW+
Sbjct: 591 KVQRSDGSVGWVSAD 605
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDGTIGWINK 112
TI + R V+ Y G V ++ + + W +++ DG++GW++
Sbjct: 548 TITGTDVRMRASYSTDSDVLG-YFDNGETVTILDDVTSGGQRWLKVQRSDGSVGWVSA 604
>gi|281418359|ref|ZP_06249379.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|281409761|gb|EFB40019.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
Length = 503
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 42 LSHEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
S E I ++ +P + + AN R GPG + ++ T +T G + V+ NW Q
Sbjct: 83 SSTELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGII-TRMTNGARLPVIGFSNNWYQ 141
Query: 100 IRDFDGTIGWINKSLL-----SGKR 119
+R ++G GWI+ S++ SG+R
Sbjct: 142 VRLYNGREGWISGSIVTRNVYSGRR 166
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
+ + N N+ + P I+ ++ G L + S W EGWI
Sbjct: 95 IPLYTEAVVNVGTANIRRGPGTNFGIITRMTNGARLPVIGFSNNWYQVRLYNGREGWISG 154
Query: 182 QKI 184
+
Sbjct: 155 SIV 157
>gi|125974304|ref|YP_001038214.1| peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|256003477|ref|ZP_05428467.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|125714529|gb|ABN53021.1| Peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|255992501|gb|EEU02593.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|316941452|gb|ADU75486.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
Length = 503
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 42 LSHEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
S E I ++ +P + + AN R GPG + ++ T +T G + V+ NW Q
Sbjct: 83 SSTELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGII-TRMTNGARLPVIGFSNNWYQ 141
Query: 100 IRDFDGTIGWINKSLL-----SGKR 119
+R ++G GWI+ S++ SG+R
Sbjct: 142 VRLYNGREGWISGSIVTRNVYSGRR 166
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
+ + N N+ + P I+ ++ G L + S W EGWI
Sbjct: 95 IPLYTEAVVNVGTANIRRGPGTNFGIITRMTNGARLPVIGFSNNWYQVRLYNGREGWISG 154
Query: 182 QKI 184
+
Sbjct: 155 SIV 157
>gi|86135754|ref|ZP_01054333.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
gi|85826628|gb|EAQ46824.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
Length = 237
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGK 118
I+ASR N R GPG +Y V L + V W Q+R G GW+ SL+S K
Sbjct: 176 IRASRVNMRQGPGTIYPVTARLLAGDEVLIVEDNGTGWLQLRTRIGNKIGWVAASLVSKK 235
Query: 119 RS 120
RS
Sbjct: 236 RS 237
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
+N+ + P + A++ G +L + + W + GW+ +
Sbjct: 178 ASRVNMRQGPGTIYPVTARLLAGDEVLIVEDNGTGWLQLRTRIGNKIGWVAASLV 232
>gi|326204844|ref|ZP_08194698.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325985056|gb|EGD45898.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 298
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 10/127 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + R P ++V V V + W ++ ++ GW++ + +
Sbjct: 32 AKVVGTSVKMRKSPTTSSSIVTKLT--NAKVTVTDYSKGWYKVS-YNKKTGWVSSNYVK- 87
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N +N K S +++K++ + I + W G
Sbjct: 88 ------LQSVKGVINASGVNFRKSAGTSSKVISKLKRSTSVQILDVRKGWNKVKIGSKVG 141
Query: 178 WIKKQKI 184
++ + +
Sbjct: 142 YVSSKFV 148
>gi|163739411|ref|ZP_02146821.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
gi|161387164|gb|EDQ11523.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
Length = 233
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDF-DGTIGWINKSLLS 116
+I A+R N R GPG +Y +V L+ G V V ++ W +R DG +GWI SL+S
Sbjct: 171 SITATRVNMRSGPGTVYPIV-DRLSNGEEVAVFEDIGTGWLHLRTVKDGKVGWIAASLVS 229
Query: 117 GKR 119
KR
Sbjct: 230 QKR 232
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWC 168
I ++ + + + + ++ +N+ P IV ++ G + + W
Sbjct: 151 IQAAIETDPQEIVEPDADIRSITATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTGWL 210
Query: 169 FGYN--LDTEGWIKKQKI 184
GWI +
Sbjct: 211 HLRTVKDGKVGWIAASLV 228
>gi|227500316|ref|ZP_03930383.1| peptidoglycan-binding protein [Anaerococcus tetradius ATCC 35098]
gi|227217602|gb|EEI82914.1| peptidoglycan-binding protein [Anaerococcus tetradius ATCC 35098]
Length = 288
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 54/174 (31%), Gaps = 26/174 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + L +L+ L F + A + + KA N R
Sbjct: 1 MNRLTKYALAAALV--LPTVFSIGSKEAKADRINLDTN---------KAKVVNVRNSAEE 49
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTN 131
V+ EV+ + W +I DF+G ++ S L+ + I
Sbjct: 50 KNNVIGQIKDSNKSYEVLGKSNGWYRI-DFEGKEAFVGTSWFKLTAETEVI--------- 99
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N + S ++ + G ++ I E + + EG+I +
Sbjct: 100 --APANFRDAAKLSSKVIKVLNEGDIVEVIEEADNGFVKVKHNGEEGYIYNNLL 151
>gi|308178437|ref|YP_003917843.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307745900|emb|CBT76872.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 240
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 7/134 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R G G Y V+ + +G V + + W Q++ +GW+ L
Sbjct: 109 VTTATLNLRKGSGTGYPVLKV-IDQGSKVRSMLQQGLWSQVQ-CGKLLGWVPSMYLQQVP 166
Query: 120 S-----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S +++ N++ I +N + P +V + + I G W
Sbjct: 167 SRPAKGGLIAVPNQRALTTIGLNARRGPGDHYSLVRILPADTAVVIVARQGAWRRIDRDG 226
Query: 175 TEGWIKKQKIWGIY 188
E WI ++ +Y
Sbjct: 227 EEMWIPASQLRTVY 240
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+P + N+R GPG Y++V L V +V WR+I D DG WI
Sbjct: 176 AVPNQRALTTIGLNARRGPGDHYSLV-RILPADTAVVIVARQGAWRRI-DRDGEEMWIPA 233
Query: 113 SLL 115
S L
Sbjct: 234 SQL 236
>gi|209966482|ref|YP_002299397.1| hypothetical protein RC1_3223 [Rhodospirillum centenum SW]
gi|209959948|gb|ACJ00585.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 346
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 3 THAEKILYSLDL---RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT 59
T K + + + K +P+ + P+ A+S + P P
Sbjct: 227 TEMGKTMIAAIMDAVNKLVPQFRAMPQVAAALKAPQATPMAAVSSVGGVPAAVPQPGTTY 286
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL 115
N R GPG V+ + +G V+ E+EN W ++R G GW+ L
Sbjct: 287 RATEGVNLRGGPGTSAEVIGQ-IAQGAAVQATGEHENGWFRVRTATGQTGWVAARTL 342
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGY 171
S + G +A+ P +NL P + ++ ++ G + E W
Sbjct: 270 SSVGGVPAAVPQPGTTYRATEG-VNLRGGPGTSAEVIGQIAQGAAVQATGEHENGWFRVR 328
Query: 172 -NLDTEGWIKKQKI 184
GW+ + +
Sbjct: 329 TATGQTGWVAARTL 342
>gi|312793021|ref|YP_004025944.1| nlp/p60 protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180161|gb|ADQ40331.1| NLP/P60 protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 319
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 18/136 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSG 117
S N R P ++ + KG +V+ W +I +DG +G++ L +
Sbjct: 29 AKSTVNIRSTPSTNGKILGVF-PKGFKAQVLSSAGGWVKIS-YDGIVGYVKSDYIKLTND 86
Query: 118 KRSAIVSPWNRKTNN-----------PIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSG 165
K S+ + L S I+ ++ G + +
Sbjct: 87 KTSSASNISRASVAKTAAKAAQATVLKDNARLRSDMSTSSKILKTLQSGSKVYVLSREQN 146
Query: 166 EWCFGYN-LDTEGWIK 180
W T G++
Sbjct: 147 GWVKVKTLDGTVGYMA 162
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P I+ G + +G W G++K I
Sbjct: 25 QSVEAKSTVNIRSTPSTNGKILGVFPKGFKAQVLSSAGGWVKISYDGIVGYVKSDYI 81
>gi|218782161|ref|YP_002433479.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218763545|gb|ACL06011.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++ N R G G+ Y ++ L G VE++++ + W +IR DG GW+ +L+ +
Sbjct: 30 TKINMRSGKGVDYRII-AMLDTGQTVELLEQSDGWAKIRLGDGKEGWVLSRMLTDQ 84
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
IN+ + I+A ++ G + + E S W EGW+ + +
Sbjct: 30 TKINMRSGKGVDYRIIAMLDTGQTVELLEQSDGWAKIRLGDGKEGWVLSRML 81
>gi|228991863|ref|ZP_04151799.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
gi|228767592|gb|EEM16219.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
T+A+ L I + + K + +K + ++
Sbjct: 10 AATVAVTSLLPSITEADMKTAAVQPKNNVKIGHVKLDKVQL-YQENTTNGDSLGSISYNT 68
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PV +++ +W ++ + IG+I KS LS + + N+ N +NL +P IQS
Sbjct: 69 PVTILETTRDWYKV-NAQNKIGYIQKSNLSLAK--LNQQRNQHIVNASALNLRSEPSIQS 125
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G ++++E +W G++KK+ +
Sbjct: 126 SILDVLPNGTFISVQETLNDWYLISYNGKIGYVKKEFV 163
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R P I +++ L G + V + +W I ++G IG++ K +S
Sbjct: 110 VNASALNLRSEPSIQSSIL-DVLPNGTFISVQETLNDWYLIS-YNGKIGYVKKEFVSHNS 167
Query: 120 SAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
V + N+ + + + ++ ++ G + + G W
Sbjct: 168 QPFVKGITIQNNSYYVATPKLRVRNGAGTNTAVIGSLQNGTQIQVVGTVGTWYKIRFGSG 227
Query: 176 EGWIKKQKI 184
G++ KQ +
Sbjct: 228 YGYVTKQYV 236
>gi|225019511|ref|ZP_03708703.1| hypothetical protein CLOSTMETH_03464 [Clostridium methylpentosum
DSM 5476]
gi|224947732|gb|EEG28941.1| hypothetical protein CLOSTMETH_03464 [Clostridium methylpentosum
DSM 5476]
Length = 343
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R P + + + V+V+ W ++ + G IG++ +
Sbjct: 210 VTADLLNVRAAPSTD-AIRLRQVARTNEVDVLAIVSNGWLKV-NVAGLIGYVFAKYIQYD 267
Query: 119 RS---AIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ I +P N + +N+ Q ++ +V G + + E W +
Sbjct: 268 PNGLPVISAPSNEQVEGICTANLLNVRAGAGTQYRVLFQVAEGNSVNVMEERSGWYYINC 327
Query: 173 LDTEGWIKKQKI 184
+GW Q I
Sbjct: 328 RHGKGWCSAQYI 339
>gi|308178881|ref|YP_003918287.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307746344|emb|CBT77316.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 430
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 17/184 (9%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF----VTIKASR-ANSRIG 70
+ + +L+ + L + E +P ++K + N R G
Sbjct: 2 RILRPRFLAALMAASLLLVGLGVPSQAAPALAAVETAAVPLAKTGVASVKTTANLNMRKG 61
Query: 71 PGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWI---NKSLLSGKR-----SA 121
Y +V + K V V ++ W ++ + GWI +S S
Sbjct: 62 ESTKYAIV-RTIPKNTTVPVSQQAANGWYKVS-YKKKTGWISNKYAKAVSRHPAPKPKSG 119
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N N +N+ + I+ + E + + S W GW+
Sbjct: 120 PSKKINLWVNATAAVNIRQGAGTSHKIIGSLPENAAVKAVARASNGWYKITYKKKTGWVS 179
Query: 181 KQKI 184
+ +
Sbjct: 180 HKHV 183
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 38/144 (26%), Gaps = 32/144 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R G G + ++ + L + V+ V W +I + GW++
Sbjct: 134 VNIRQGAGTSHKIIGS-LPENAAVKAVARASNGWYKIT-YKKKTGWVSHK------HVQT 185
Query: 124 SPWNRKTNNPIYINLYKKPDI-----QSIIVAKVEPGVLLTIRE---------------- 162
+ + Y + S G L I +
Sbjct: 186 CVKGCQVDTGAYTTNRAGLNDRYFTKSSGTDLYAAAGKRLRIGDIPKNSIVYRDLRWEKA 245
Query: 163 --CSGEWCFGYNLDTEGWIKKQKI 184
W F +GW+K +
Sbjct: 246 GGPVAGWYFVRTQGMDGWMKASAL 269
>gi|229133839|ref|ZP_04262662.1| 3D domain protein [Bacillus cereus BDRD-ST196]
gi|228649540|gb|EEL05552.1| 3D domain protein [Bacillus cereus BDRD-ST196]
Length = 571
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 24/168 (14%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A L + + I A N R P V
Sbjct: 12 MEAIMKKIIGAATATVLGLGAFTTSAIAETIVT-----------ADVLNVREKPTTESKV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + +G ++V+ E W +I D +G +++ +N
Sbjct: 61 V-EKVKEGQKLKVIHTEEGWSKI-DLNGKELFVSSEYTKDIYHV----------TANLLN 108
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + +S I+ ++ + V+ + + W + +
Sbjct: 109 VRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 156
>gi|163940703|ref|YP_001645587.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163862900|gb|ABY43959.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 575
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 24/168 (14%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A L + + I A N R P V
Sbjct: 12 MEAIMKKIIGAATATVLGLGAFTTSAIAETIVT-----------ADVLNVREKPTTESKV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + +G ++V+ E W +I D +G +++ +N
Sbjct: 61 V-EKVKEGQKLKVIHTEEGWSKI-DLNGKELFVSSEYTKDIYHV----------TANLLN 108
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + +S I+ ++ + V+ + + W + +
Sbjct: 109 VRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 156
>gi|302608284|emb|CBW44748.1| conserved hypothetical protein, SH3-like region precursor
[Marinobacter hydrocarbonoclasticus]
Length = 222
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y ++ L G P+EV++ +N+ ++R GT GW+ LS + A
Sbjct: 35 VRSGAGTQYRIIENALPSGTPLEVLETGDNYTRVRTPKGTEGWVASQYLSNEPIA 89
>gi|308070741|ref|YP_003872346.1| cell wall-associated hydrolase (invasion-associated protein)
[Paenibacillus polymyxa E681]
gi|305860020|gb|ADM71808.1| Cell wall-associated hydrolase (invasion-associated protein)
[Paenibacillus polymyxa E681]
Length = 379
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 61/196 (31%), Gaps = 44/196 (22%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S AI+ + A + +K + + R GP VV ++
Sbjct: 1 MTSAALLAAIHVAPGQVDAAASTASTGQKAVI-------QAAVKLRSGPSTTGDVVS-FM 52
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSL--------------------------- 114
+G V V+++ + W +I+ DG G+ + S
Sbjct: 53 KQGEAVTVLEKTNSYWYKIKTSDGVTGYTSSSDKYIKIGATSVAAAVTPSTTRKSEATES 112
Query: 115 ---LSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEW 167
+S K S S K + L + S ++ + G ++TI + + W
Sbjct: 113 VKNVSAKEAVASVNSSAGQTKATIQTSVRLRAEASTSSEVLGYLNAGDVVTITDPSNAYW 172
Query: 168 CFGY-NLDTEGWIKKQ 182
T G++
Sbjct: 173 FKVTNADGTVGYVSSS 188
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSA 121
+ R V+ YL G V + W ++ + DGT+G++ S
Sbjct: 138 TSVRLRAEASTSSEVLG-YLNAGDVVTITDPSNAYWFKVTNADGTVGYV-----SSSPQY 191
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
I P+ + PD + I A P
Sbjct: 192 IRIGEGVVVQQPVSAPVTTTPDTTA-IPATASP 223
>gi|314970791|gb|EFT14889.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA3]
Length = 337
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 49/164 (29%), Gaps = 26/164 (15%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTI 107
F + LP +T N R G + T +G V V W + +G
Sbjct: 113 FGSEALPGTMTAAVP-VNVR-GDAANAGKILTVAERGQQVRVTGRPDRGWVPV-AVNGKS 169
Query: 108 GWINKSLLS--GKRSAIVSPW-------------------NRKTNNPIYINLYKKPDIQS 146
GWI L+ +A P + T +N+ P S
Sbjct: 170 GWIYGRYLTTGKVTTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSS 229
Query: 147 IIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
++ ++ G + E G W GW + + G P
Sbjct: 230 QVINQLANGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTGKLP 273
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 6/122 (4%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLP---RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
P ++ + P T S N R P V+ L G V
Sbjct: 183 TTAPAKPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVI-NQLANGTGV 241
Query: 89 EVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
E + NW QIR DG GW ++ L+GK A+ K P N P S
Sbjct: 242 HATGEVHGNWVQIR-ADGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSA 300
Query: 148 IV 149
+
Sbjct: 301 PI 302
>gi|309791195|ref|ZP_07685727.1| SH3 type 3 domain protein [Oscillochloris trichoides DG6]
gi|308226757|gb|EFO80453.1| SH3 type 3 domain protein [Oscillochloris trichoides DG6]
Length = 420
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 21/162 (12%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRA------NSRIGPGI--MYTVVCTYLTKGLPVEVVKE 93
+ E E P P + + N R P + V G V+++++
Sbjct: 247 STVETATPEVSPTPTIGVVSGTEVAVVNGGNVRALPFVMPNNRVGGV--DAGNRVQIIEQ 304
Query: 94 Y--ENWRQIR-----DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-NLYKKPDIQ 145
W +I D GWI+ SLLS ++Y + +
Sbjct: 305 TPNGEWYRISFINTDDGQQKEGWISASLLSVTAEMKAQVPVATIVTVFVAGSVYTEANTT 364
Query: 146 SIIVAKVEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQKI 184
S V +V ++ +++ + + W GW+ K +
Sbjct: 365 SKPVDQVNVYEIVNLKQKTADGTWYEIETVRGNSGWVAKGLL 406
>gi|260662180|ref|ZP_05863076.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum
28-3-CHN]
gi|260553563|gb|EEX26455.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum
28-3-CHN]
Length = 326
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILAL--------SHEKEIFEKKPLPRFVTIKAS 63
+ + K L++S + L + + +AL + +F L +I S
Sbjct: 23 VTAEVIIIKTLRHSRLAILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGEL----SINPS 78
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ R GPG+ Y+ +TK +++++ W ++R + W+ + +
Sbjct: 79 KVTVRKGPGLDYSK--VKVTKTFQSQILQKRNGWLKVRLANNKTAWVPSWQ--AENTVAK 134
Query: 124 SPWNRKTNNPIYIN 137
+ + +N I I+
Sbjct: 135 TAATKLSNATIVID 148
>gi|229136051|ref|ZP_04264807.1| hypothetical protein bcere0014_49260 [Bacillus cereus BDRD-ST196]
gi|228647372|gb|EEL03451.1| hypothetical protein bcere0014_49260 [Bacillus cereus BDRD-ST196]
Length = 296
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 24/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L A ++ + + +K N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV-----------VKTDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G ++V+ W QI+ DG +++ +N
Sbjct: 50 VGK-LQNGHKLDVLNTENGWSQIKL-DGKDAFVSAEFTKNSYYV----------TANVLN 97
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 98 VRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|160880142|ref|YP_001559110.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160428808|gb|ABX42371.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 324
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 6/165 (3%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++L LI + F L + +P T K + N R V
Sbjct: 5 KQLLLKRLIVMFGLIFSLVCLSPKIVTWAASNSEPNVGVSTTKETPLNIRASASTSSANV 64
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ L P++V+ ++ ++ G +G+ +KS ++ + + N +N
Sbjct: 65 SS-LNPNTPIQVIGSSGDFYKVIYSTSGNVGYAHKSYINISST----KYGTVVTNGGTLN 119
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
L S I+ + +L I W + G++
Sbjct: 120 LRSSASTSSQILGNIPSQTVLPIISAEDGWYKVVWGKSVGYVSST 164
>gi|309789810|ref|ZP_07684389.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
gi|308228114|gb|EFO81763.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
Length = 141
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
AN R GP VV + KG V +++ +W ++R DGT GW+ ++L I
Sbjct: 78 ANLRSGPSTNTAVVAV-VRKGTQVGLLERQGDWYRVRTPDGTQGWMANTVLKIAPGLI 134
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ I NL P + +VA V G + + E G+W T+GW+ +
Sbjct: 71 QAEATINANLRSGPSTNTAVVAVVRKGTQVGLLERQGDWYRVRTPDGTQGWMANTVL 127
>gi|260432785|ref|ZP_05786756.1| Bacterial SH3 domain family protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416613|gb|EEX09872.1| Bacterial SH3 domain family protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 215
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPIL----ALSHEKEIFEKKPLPRFV-TIKASRA 65
+ + + + + + F+LA AP+ ++ E + P P+ + + ++R
Sbjct: 100 AAGMDTPLAGMERQAETFSLASLDETAPLALRETPVAPEATPTQAAPAPKDIREVSSTRV 159
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIR-DFDGTIGWINKSLLSGK 118
N R GPG +Y +V G VEV+ + W ++R + +GWI+ SL+
Sbjct: 160 NMRDGPGTIYPIVGK-ARMGQKVEVLSDSGTGWLRLRVLPEQQVGWISASLIRKS 213
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEG 177
A +P + + + +N+ P IV K G + + SG W G
Sbjct: 144 AAPAPKDIREVSSTRVNMRDGPGTIYPIVGKARMGQKVEVLSDSGTGWLRLRVLPEQQVG 203
Query: 178 WIKKQKI 184
WI I
Sbjct: 204 WISASLI 210
>gi|4545095|gb|AAD22392.1|AF064527_2 unknown [Rhodospirillum centenum]
Length = 346
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 3 THAEKILYSLDL---RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT 59
T K + + + K +P+ + P+ A+S + P P
Sbjct: 227 TEMGKTMIAAIMDAVNKLVPQFRAMPQVAAALKAPQATPMAAVSSVGGVPAAVPQPGTTY 286
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL 115
N R GPG V+ + +G V+ E+EN W ++R G GW+ L
Sbjct: 287 RATEGVNLRGGPGTSAEVIGQ-IAQGAAVQATGEHENGWFRVRTATGQTGWVAARTL 342
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGY 171
S + G +A+ P +NL P + ++ ++ G + E W
Sbjct: 270 SSVGGVPAAVPQPGTTYRATEG-VNLRGGPGTSAEVIGQIAQGAAVQATGEHENGWFRVR 328
Query: 172 -NLDTEGWIKKQKI 184
GW+ + +
Sbjct: 329 TATGQTGWVAARTL 342
>gi|253577391|ref|ZP_04854707.1| NLP/P60 family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843191|gb|EES71223.1| NLP/P60 family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 339
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 17/170 (10%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIGPGIMYTV 77
++ S+ TL L+ A+ H+ +I N R P + V
Sbjct: 1 MKRSVAITLLSAILLSTYTAVPHQASAATATSQ----SITKGHIVGGVNFRDQPSLSGKV 56
Query: 78 VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS----LLSGKRSAIVSPWNRKTNN 132
+ +L KG V V+ + + ++ DG+IG+++ + L +A P
Sbjct: 57 IG-FLKKGSEVTVLDQSNKYFYLVKTEDGSIGYVSSNEKYIQLEAVNTAPSQPLLNLPAT 115
Query: 133 PIY-INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWI 179
Y +NL +P ++ + G LTI E S E + N T G++
Sbjct: 116 VTYGVNLRDQPSTSGNVITMLRKGTTLTILEQSNEHFYKVQTNDGTIGYV 165
>gi|168209647|ref|ZP_02635272.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens B
str. ATCC 3626]
gi|170712238|gb|EDT24420.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens B
str. ATCC 3626]
Length = 1049
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 647 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDIKDE 704
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + +N +N+ K+ + S I+ + G + I +
Sbjct: 705 VVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKI 764
Query: 171 YNLDTEGWIKKQKI 184
E + K I
Sbjct: 765 TYKGQEAYASKNYI 778
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-- 119
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 392 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 449
Query: 120 --------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + N +N+ + S ++ + +TI G
Sbjct: 450 NNSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEG 509
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 510 AFYKIEYKGSHGYVAKEYI 528
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + +G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPRGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|169344010|ref|ZP_02865001.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein
[Clostridium perfringens C str. JGS1495]
gi|169297918|gb|EDS80013.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein
[Clostridium perfringens C str. JGS1495]
Length = 1299
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 897 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDIKDE 954
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + +N +N+ K+ + S I+ + G + I +
Sbjct: 955 VVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKI 1014
Query: 171 YNLDTEGWIKKQKI 184
E + K I
Sbjct: 1015 TYKGQEAYASKNYI 1028
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-- 119
+S N R G G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 392 SSSLNVREGAGTSSKVIGS-LSGNTKVTIVGEDGAFYKIE-YKGSHGYVAKEYVKDVTES 449
Query: 120 --------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + N +N+ + S ++ + +TI G
Sbjct: 450 NNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNSKVTIVGEEG 509
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ ++G++ K+ I
Sbjct: 510 AFYKIEYKGSQGYVAKEYI 528
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 62/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGVIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + +G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPRGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 49/155 (31%), Gaps = 38/155 (24%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-------- 117
N R ++ + L G V ++ E + +I F+ + G++ +S
Sbjct: 206 NVRQASTTNSRIIGS-LKGGEKVNIISESNGFYKIE-FNNSYGYVYSKYISKDGDSEKVQ 263
Query: 118 ---------------KRSAIVSPWNRKTNNPIY-------------INLYKKPDIQSIIV 149
K+ A +P + +N+ + S ++
Sbjct: 264 VVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRALNKTGIVNVSSSLNVRNEASTSSKVI 323
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +TI G + ++G++ K+ I
Sbjct: 324 GSLSGNSKVTIVGEEGAFYKIEYKGSQGYVAKEYI 358
>gi|110801032|ref|YP_695884.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
domain-containing protein [Clostridium perfringens ATCC
13124]
gi|110675679|gb|ABG84666.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
ATCC 13124]
Length = 1049
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+S N R G V+ + L+ V +V E + +I + G+ G++ K + +
Sbjct: 647 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDIKDE 704
Query: 122 IVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+V+ + +N +N+ K+ + S I+ + G + I +
Sbjct: 705 VVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKI 764
Query: 171 YNLDTEGWIKKQKI 184
E + K I
Sbjct: 765 TYKGQEAYASKNYI 778
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-- 119
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 392 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 449
Query: 120 --------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + N +N+ + S ++ + +TI G
Sbjct: 450 NNSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEG 509
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 510 AFYKIEYKGSHGYVAKEYV 528
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + +G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPRGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|328914847|gb|AEB55680.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
Length = 387
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 14/143 (9%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ AP + + ++ + P IK +R R+ P + ++V L+KG V V+ E
Sbjct: 1 MHAAPSTSKTPAAQVDKASFAPFTGEIKGNRVRLRLAPHVDSSIV-KELSKGDYVAVIGE 59
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+++ + +G G++ ++ + +N+ +P + ++A++
Sbjct: 60 SKDYYIVAAPEGLKGYVFRTFV-----------LDNVIEGEQVNVRLEPSTSAPVLARLS 108
Query: 154 PG--VLLTIRECSGEWCFGYNLD 174
G + T + G+W +
Sbjct: 109 RGTEIQATSNQPQGKWLEIALPN 131
>gi|164687324|ref|ZP_02211352.1| hypothetical protein CLOBAR_00965 [Clostridium bartlettii DSM
16795]
gi|164603748|gb|EDQ97213.1| hypothetical protein CLOBAR_00965 [Clostridium bartlettii DSM
16795]
Length = 280
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 13/114 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R ++ + +G VE++ E+W ++ ++ G++ LS +
Sbjct: 20 NLRSSKSTSGDIITV-IPQGSKVEILDGAEDWYEVI-YNNQRGYVYNQYLSKTKYIWT-- 75
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ L P +S VA V ++ + +G+W D EG+I
Sbjct: 76 ---------DVFLRSFPTSESNSVALVPDKSIVQVLSSNGDWDHVIFNDKEGYI 120
>gi|228959866|ref|ZP_04121539.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799804|gb|EEM46748.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 348
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDHVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
>gi|260893474|ref|YP_003239571.1| SpoIID/LytB domain protein [Ammonifex degensii KC4]
gi|260865615|gb|ACX52721.1| SpoIID/LytB domain protein [Ammonifex degensii KC4]
Length = 625
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFE-KKPLPRFVTIKASRANSRIGPGIMYT 76
+ +++ A + A ++ E + LP + AS N R GPG Y
Sbjct: 114 VAPLIRQDRTMLPARFVAEALGYVVNWEANTQTIRIVLPPAAKVLASALNLREGPGTSYG 173
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + +G + ++K W Q++ +G GW+ + + SP +R T
Sbjct: 174 IKGR-VERGEVLRILKAASGWYQVQLENGQEGWVAAPYTEPLPT-LPSPISRGTGEKESN 231
Query: 137 N 137
N
Sbjct: 232 N 232
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLD 174
+ ++ + +NL + P I +VE G +L I + + W
Sbjct: 142 ANTQTIRIVLPPAAKVLASALNLREGPGTSYGIKGRVERGEVLRILKAASGWYQVQLENG 201
Query: 175 TEGWIK 180
EGW+
Sbjct: 202 QEGWVA 207
>gi|229063898|ref|ZP_04200199.1| hypothetical protein bcere0026_49570 [Bacillus cereus AH603]
gi|228716368|gb|EEL68076.1| hypothetical protein bcere0026_49570 [Bacillus cereus AH603]
Length = 295
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 24/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L A ++ + + +K N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV-----------VKTDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G ++V+ W QI+ DG +++ +N
Sbjct: 50 VGK-LQNGHKLDVLNTENGWSQIKL-DGKDAFVSTEFTKNSYYV----------TANVLN 97
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 98 VRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|159900539|ref|YP_001546786.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
gi|159893578|gb|ABX06658.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
Length = 539
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
A R N R GPG Y + + G ++++ ++E W +IR DG + W+ + ++S
Sbjct: 333 ADRTNLREGPGTAYEKI-VKVNAGERLQLIAKHEVWVKIRQSDGEVAWVAREVVS 386
>gi|325845699|ref|ZP_08168982.1| SH3 domain protein [Turicibacter sp. HGF1]
gi|325488300|gb|EGC90726.1| SH3 domain protein [Turicibacter sp. HGF1]
Length = 280
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 13/122 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ S N R G ++ + K +EV + W ++ ++ GT G++++ +S
Sbjct: 13 IKYTTSNLNLRRGKSTSAPILLM-IPKYSKIEVTDTDDEWLEV-NYQGTRGYVSRDYVSK 70
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +NL + P S ++ + + + G W + D G
Sbjct: 71 T-----------MSPYSNLNLREAPSTTSNVLTLIPKQSRIEVLATEGNWSYVVYNDEFG 119
Query: 178 WI 179
++
Sbjct: 120 YV 121
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + + I+ + + + + EW T G++ + +
Sbjct: 20 LNLRRGKSTSAPILLMIPKYSKIEVTDTDDEWLEVNYQGTRGYVSRDYV 68
>gi|293376731|ref|ZP_06622953.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
gi|292644597|gb|EFF62685.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
Length = 280
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 13/122 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ S N R G ++ + K +EV + W ++ ++ GT G++++ +S
Sbjct: 13 IKYTTSNLNLRRGKSTSAPILLM-IPKYSKIEVTDTDDEWLEV-NYQGTRGYVSRDYVSK 70
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +NL + P S ++ + + + G W + D G
Sbjct: 71 T-----------MSPYSNLNLREAPSTTSNVLTLIPKQSRIEVLATEGNWSYVVYNDEFG 119
Query: 178 WI 179
++
Sbjct: 120 YV 121
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 19/49 (38%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + + I+ + + + + EW T G++ + +
Sbjct: 20 LNLRRGKSTSAPILLMIPKYSKIEVTDTDDEWLEVNYQGTRGYVSRDYV 68
>gi|164688708|ref|ZP_02212736.1| hypothetical protein CLOBAR_02355 [Clostridium bartlettii DSM
16795]
gi|164602184|gb|EDQ95649.1| hypothetical protein CLOBAR_02355 [Clostridium bartlettii DSM
16795]
Length = 358
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 24/140 (17%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL--- 115
+ A N R GP Y + + L +G V V W +I+ G +G+++ L
Sbjct: 57 VTAYALNIRKGPSTSYERIGS-LAEGQKVTVTSTASNGWYKIKTSSGKVGYVSPKYLKVS 115
Query: 116 --------------SGKRSAIVSPWNR----KTNNPIYINLYKKPDIQSIIVAKVEPG-V 156
+ K + +V +++ + +NL P + G V
Sbjct: 116 TTEADKDDKDDNENTHKGTYVVKTYSKISKVGRVSVSSLNLRTGPSTSYSKKGSLHKGYV 175
Query: 157 LLTIRECSGEWCFGYNLDTE 176
+ +++ S W +
Sbjct: 176 VGIVKQYSNGWYQVKLKGGK 195
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL--- 115
+ S N R GP Y+ + L KG V +VK+Y W Q++ G G ++ S L
Sbjct: 149 VSVSSLNLRTGPSTSYSKKGS-LHKGYVVGIVKQYSNGWYQVKLKGGKKGCVDGSYLKIT 207
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
SG S + + + T + ++ V+ V
Sbjct: 208 SGTSSDLKNGSSLSTGKEDNNDGTVSSSRVQAVINMVKRQV 248
>gi|228953948|ref|ZP_04115984.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071182|ref|ZP_04204407.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|229080938|ref|ZP_04213452.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228702355|gb|EEL54827.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228711923|gb|EEL63873.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|228805723|gb|EEM52306.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 367
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 346
>gi|163848614|ref|YP_001636658.1| SH3 type 3 domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526549|ref|YP_002571020.1| SH3 type 3 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669903|gb|ABY36269.1| SH3 type 3 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222450428|gb|ACM54694.1| SH3 type 3 domain protein [Chloroflexus sp. Y-400-fl]
Length = 416
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 62 ASRANSRIGP--GIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSG 117
+ N R P GI + G V+++ N W +R IGW++ +L++
Sbjct: 274 TNGGNVRSLPYTGIDNVIGGI--NAGEQVQILARTPNAQWYYVRTVRDEIGWVSVTLIAV 331
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NL 173
A +P + LY D S + +VE ++ + E + + W
Sbjct: 332 TDLIAAETPVANVVTVFVSGPLYLAADPASAQIDRVEVNEVVELFERTADGTWYRVRNVR 391
Query: 174 DTEGWIKKQKI 184
D EGW++ +
Sbjct: 392 DREGWVQASLL 402
>gi|184155306|ref|YP_001843646.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum IFO
3956]
gi|183226650|dbj|BAG27166.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum IFO
3956]
Length = 326
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILAL--------SHEKEIFEKKPLPRFVTIKAS 63
+ + K L++S + L + + +AL + +F L +I S
Sbjct: 23 VTAEVIIIKTLRHSRLAILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGEL----SINPS 78
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
+ R GPG+ Y+ +TK +++++ W ++R + W+
Sbjct: 79 KVTVRKGPGLDYSK--VKVTKTFQSQILQKRNGWLKVRLANNKTAWVPSWQ 127
>gi|229151873|ref|ZP_04280071.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus m1550]
gi|228631578|gb|EEK88209.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus m1550]
Length = 367
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 346
>gi|224371145|ref|YP_002605309.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
gi|223693862|gb|ACN17145.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
Length = 204
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P+L + +E E + V++ N R GPG+ Y V +G + V +E W
Sbjct: 119 PVLTAAEREETAEIVKVKEEVSVAVEILNVRSGPGMTYGVSSL-AYQGQILRVYQESTGW 177
Query: 98 RQIRDFDGTIGWINKSLLSG 117
+ G +GW++K ++
Sbjct: 178 LYVELPSGKLGWVDKKFITA 197
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 82 LTKGLPVEVVKE-----YENWRQIRDFDGTIGWINKSLLSG----KRSAIVSPWNRKTNN 132
L G + +V + + +R DG + + +L+ + + IV +
Sbjct: 84 LPPGYGIRIVDDAKYYYFNGIYYVRVPDGYLV-VAPPVLTAAEREETAEIVKVKEEVSVA 142
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+N+ P + + + G +L + + S W + + GW+ K+ I
Sbjct: 143 VEILNVRSGPGMTYGVSSLAYQGQILRVYQESTGWLYVELPSGKLGWVDKKFI 195
>gi|310643966|ref|YP_003948724.1| nlp/p60 family protein [Paenibacillus polymyxa SC2]
gi|309248916|gb|ADO58483.1| NLP/P60 family protein [Paenibacillus polymyxa SC2]
Length = 396
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 50/212 (23%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R+ + +L S AI+ + A + +K + + R GP
Sbjct: 1 MRRRVMGMLMTSAALLAAIHVAPGQVDAAASTTASAGQKAVIQAA------VKLRSGPST 54
Query: 74 MYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSL-----------------L 115
VV ++ +G V V+++ N W +++ DG G+ + S +
Sbjct: 55 TGDVVS-FMKQGEAVTVLEKTNNYWYKVKTSDGVTGYTSSSDKYIKVGATSVAAAATPPV 113
Query: 116 SGKR-----------------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
S K S S K + L + S ++ +
Sbjct: 114 SRKTEASESAKTVSASVKNVSTKEASASVNSSAGQTKATIQTSVRLRAEASTSSEVLGYM 173
Query: 153 EPGVLLTI-RECSGEWCFG-YNLDTEGWIKKQ 182
G ++TI + W T G++
Sbjct: 174 NTGDVVTITDSSNAYWFKVTTADGTVGYVSSS 205
>gi|291523498|emb|CBK81791.1| SH3 domain protein [Coprococcus catus GD/7]
Length = 713
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 25/142 (17%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKR- 119
N R G G Y+VV T LTK V + E ++ W +I G+++ S L+ K
Sbjct: 394 NMRSGAGTNYSVVTT-LTKNTAVTITGEAKDSSGTLWYKIT-AGSKTGYVHSSYLTKKNA 451
Query: 120 -----------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-- 166
++ +N+ +V V +T+ +
Sbjct: 452 GGNSSNNNNSDTSTDVSGQTMKVAYDVVNVRSGAGTSKGVVTVVYQNEKVTVVGQDKDSS 511
Query: 167 ---WCFGY-NLDTEGWIKKQKI 184
W G+I+ +
Sbjct: 512 GNIWYKIKTASGKTGYIRSDLL 533
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINK 112
+ +K N R G G V+ + + VV + ++ W +++ G G+I
Sbjct: 563 MQVKYDGVNMRSGAGTSKGVIEVIYLEDT-LTVVGQDKDSSGNIWYKVKAKSGNTGYIRS 621
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY---------INLYKKPDIQSIIVAKVEPGVLLTIREC 163
+L S+ + + +T++ +N+ + ++ + G +TI E
Sbjct: 622 DMLKQSSSSGSTASSDQTSDSTPTSGRVVDGWLNVRSGAGTSNKVLVVISEGTKVTISES 681
Query: 164 SGE-----WCFGYNL----DTEGWIKKQKI 184
+ W + +G++ Q I
Sbjct: 682 VKDGSGSLWYHITVNYGGVNYDGYVSSQYI 711
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 28/154 (18%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINK 112
+ + N R G G VV + + V VV + ++ W +I+ G G+I
Sbjct: 472 MKVAYDVVNVRSGAGTSKGVVTV-VYQNEKVTVVGQDKDSSGNIWYKIKTASGKTGYIRS 530
Query: 113 SLL----------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
LL S + + +N+ ++ +
Sbjct: 531 DLLKADSSNSSDTKSDSNNSNSGTESDLNGQKMQVKYDGVNMRSGAGTSKGVIEVIYLED 590
Query: 157 LLTIRECSGE-----WCFGYNL-DTEGWIKKQKI 184
LT+ + W G+I+ +
Sbjct: 591 TLTVVGQDKDSSGNIWYKVKAKSGNTGYIRSDML 624
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 27/180 (15%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFV----TIKASRANSRIGPGIMYTVVCTYLTKG 85
LAIY +S + + P V T+ S R G G +++ T ++K
Sbjct: 180 LAIYKGKNAGGTVSGDPGNTDNTTTPDKVIGTGTVNCSSLYVRSGAGTNNSII-TAISKN 238
Query: 86 LPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGK-------RSAIVSPWNRKTNNP 133
V+++ E + W Q++ G G++ ++ K + + N
Sbjct: 239 TSVDILGEANDSKGRKWYQVK-VGGRTGYVCADYITVKNSGSNNNNNNTETASGSGVVNC 297
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFG----YNLDTEGWIKKQKI 184
+N+ S +V + +TI + + W +G++ Q I
Sbjct: 298 SALNVRSSAGTGSSVVTTISRNQAVTITGTAKDSSGSKWYAVSFTKSGKSYKGYVFAQYI 357
>gi|255263880|ref|ZP_05343222.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
gi|255106215|gb|EET48889.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
Length = 180
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLS 116
++ A+R N R GPG + V+ LT+G E+++E ++ W ++R D G +GW+ LLS
Sbjct: 118 SVDANRVNMRAGPGTNFGVL-AKLTRGTEAEILEENDDGWVRLRVTDSGQVGWMAARLLS 176
Query: 117 GK 118
K
Sbjct: 177 EK 178
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WC 168
+ LS + ++ + +N+ P ++AK+ G I E + + W
Sbjct: 98 VETVALSQVEEIEEVVKDIRSVDANRVNMRAGPGTNFGVLAKLTRGTEAEILEENDDGWV 157
Query: 169 FGYN--LDTEGWIKKQKI 184
GW+ + +
Sbjct: 158 RLRVTDSGQVGWMAARLL 175
>gi|228922384|ref|ZP_04085690.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837259|gb|EEM82594.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 332
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 214 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 263
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 264 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 311
>gi|229075566|ref|ZP_04208553.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-18]
gi|228707545|gb|EEL59731.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-18]
Length = 334
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 21/133 (15%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ I N R GP + +V+ L +G EV+ E + W + G
Sbjct: 204 PPNNATPVYGVAVINGDNVNLRTGPSLQSSVI-RQLNRGESYEVLSEQDGWLAL----GG 258
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
WI S I T +NL P + ++ ++ G +
Sbjct: 259 NEWIYYD-----SSYIQYKHYVATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------ 307
Query: 167 WCFGYNLDTEGWI 179
WC +GW+
Sbjct: 308 WCK-----QDGWL 315
>gi|229104211|ref|ZP_04234883.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-28]
gi|229117133|ref|ZP_04246512.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-3]
gi|228666301|gb|EEL21764.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-3]
gi|228679228|gb|EEL33433.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-28]
Length = 334
Score = 54.6 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 21/133 (15%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ I N R GP + +V+ L +G EV+ E + W + G
Sbjct: 204 PPNNATPVYGVAVINGDNVNLRTGPSLQSSVI-RQLNRGESYEVLSEQDGWLAL----GG 258
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
WI S I T +NL P + ++ ++ G +
Sbjct: 259 NEWIYYD-----SSYIQYKHYVATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------ 307
Query: 167 WCFGYNLDTEGWI 179
WC +GW+
Sbjct: 308 WCK-----QDGWL 315
>gi|47568779|ref|ZP_00239474.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47554559|gb|EAL12915.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 459
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + +G ++V+ + W +I D +G +++
Sbjct: 31 DVLNVREKPTTESKVV-EKVKEGQELKVINTEDGWSKI-DLNGKEVFVSSEFTKDVYHV- 87
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ +S I+ +++ V+ + + W ++
Sbjct: 88 ---------TANLLNVRSDASTESEILGRLKTNDVIESTHQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|229098115|ref|ZP_04229063.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-29]
gi|228685306|gb|EEL39236.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-29]
Length = 334
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 21/133 (15%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ I N R GP + +V+ L +G EV+ E + W + G
Sbjct: 204 PPNNATPVYGVAVINGDNVNLRTGPSLQSSVI-RQLNRGESYEVLSEQDGWLAL----GG 258
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
WI S I T +NL P + ++ ++ G +
Sbjct: 259 NEWIYYD-----SSYIQYKHYVATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------ 307
Query: 167 WCFGYNLDTEGWI 179
WC +GW+
Sbjct: 308 WCK-----QDGWL 315
>gi|228966637|ref|ZP_04127683.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228793013|gb|EEM40569.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 328
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 24/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ L A F L + + I N R P + +V
Sbjct: 10 RLFMKKLLSIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLV 58
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G ++V+ W +I+ +G +++ +N+
Sbjct: 59 GKVL-SGNTLDVINTENGWTKIKL-NGKEAFVSAEFTKSTYYV----------TAGVLNV 106
Query: 139 YKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ G V+ T + EW G++ + G P
Sbjct: 107 RAGANTDSEILGKLNKGDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L KG +E + W Q D++G +G+++ L+G
Sbjct: 99 VTAGVLNVRAGANTDSEILGK-LNKGDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 156
Query: 119 RSAI 122
I
Sbjct: 157 APVI 160
>gi|229496226|ref|ZP_04389946.1| bacterial SH3 domain protein [Porphyromonas endodontalis ATCC
35406]
gi|229316804|gb|EEN82717.1| bacterial SH3 domain protein [Porphyromonas endodontalis ATCC
35406]
Length = 199
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 34/141 (24%)
Query: 66 NSRIGP-GIMYTVVCTYLTKGLPVEVVKEYENWRQI--------------RDFDGTIGWI 110
N R P G++ ++ + V V++E+ W +I D + WI
Sbjct: 66 NVRQTPNGVVMRILMPNEHSYM-VSVLEEWNGWFRIDNPIQVLDTEEDLYCDGEMPTLWI 124
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ SLL + + L K+P S + ++ V++ G+W
Sbjct: 125 HSSLL-------------GCTTRVDVQLLKEPSSSSPVSIRIGADVVVQPMAIKGQWVKV 171
Query: 171 YNLD-----TEGWIKKQKIWG 186
+ + GW+K + G
Sbjct: 172 KHTNSRNKTFTGWVKASSLCG 192
>gi|326789271|ref|YP_004307092.1| SH3 type 3 domain protein [Clostridium lentocellum DSM 5427]
gi|326540035|gb|ADZ81894.1| SH3 type 3 domain protein [Clostridium lentocellum DSM 5427]
Length = 280
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 13/115 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R V+ + G V+V+ E+W ++ ++ G++ S LS I
Sbjct: 19 VNLRESNTTTSNVLTV-IPAGSKVQVIDSAEDWYEVI-YNNQKGYVYASYLS-----ITK 71
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
R T L P +S V V + + G+W D +G+I
Sbjct: 72 YTWRDTL------LRSYPAAESNPVTVVPAKSEVEVLSVVGDWSQVIYNDRKGYI 120
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 21/49 (42%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + S ++ + G + + + + +W + +G++ +
Sbjct: 19 VNLRESNTTTSNVLTVIPAGSKVQVIDSAEDWYEVIYNNQKGYVYASYL 67
>gi|227514595|ref|ZP_03944644.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum ATCC
14931]
gi|227087006|gb|EEI22318.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum ATCC
14931]
Length = 289
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
IL ++ L I + + +F L +I S+ R GPG+ Y+
Sbjct: 2 AILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGEL----SINPSKVTVRKGPGLDYSK-- 55
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+TK +++++ W ++R + W+ + + + + N I I+
Sbjct: 56 VKVTKTFQSQILQKRNGWLKVRLANNKTAWVPSWQ--AENTVAKTAATKLPNATIVID 111
>gi|154482741|ref|ZP_02025189.1| hypothetical protein EUBVEN_00418 [Eubacterium ventriosum ATCC
27560]
gi|149736336|gb|EDM52222.1| hypothetical protein EUBVEN_00418 [Eubacterium ventriosum ATCC
27560]
Length = 343
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 22/162 (13%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
I H + V I A N RIGPG Y V T + +G +V
Sbjct: 182 ILGGSVSAGGQQHTAQPTTDNVASYKVKITADVLNVRIGPGTDYGVA-TQVKQGEVYTIV 240
Query: 92 KEYEN----WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN------NPIYINLYKK 141
E N W +++ G SL +R A ++ + N +N+ K
Sbjct: 241 GEVRNGNTTWGKLKSGAG-----YISLGYTERIAGMTANTPQDTSYRVKINTAVLNVRKG 295
Query: 142 PDIQSIIVAKVEPGVLLTI--RECSGE--WCFGYNLDTEGWI 179
P + +V+ G + TI E +G W + G+I
Sbjct: 296 PGTNYPVTTQVKQGEVYTIVGEEKNGNTTWGKLKSG--AGYI 335
>gi|229191764|ref|ZP_04318740.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228591703|gb|EEK49546.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 367
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 346
>gi|229060635|ref|ZP_04197993.1| 3D domain protein [Bacillus cereus AH603]
gi|228718635|gb|EEL70263.1| 3D domain protein [Bacillus cereus AH603]
Length = 519
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 18/153 (11%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ A F + + + A N R P VV + +G ++V+
Sbjct: 19 IIGAATATVLGLGAFTTSAIAETI-VTADVLNVREKPTTESKVV-EKVKEGQKLKVIHTE 76
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKV 152
E W +I L+GK + S + + +N+ + + +S I+ ++
Sbjct: 77 EGWSKIE-------------LNGKEVFVSSEFTKDIYHVTANLLNVRTEANTESEILGRL 123
Query: 153 -EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V+ + + W + +
Sbjct: 124 KQDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 156
>gi|228940760|ref|ZP_04103322.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973679|ref|ZP_04134260.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228786038|gb|EEM34036.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818911|gb|EEM64974.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 367
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +++ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSII-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
>gi|295136524|ref|YP_003587200.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
gi|294984539|gb|ADF55004.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
Length = 402
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
IK S AN R P + T G+PV+V K+ +W I+ DG + W++ +
Sbjct: 112 IKISVANLREEP--RHAAQLVTQTTLGMPVKVYKKQGSWYYIQTPDGYLAWVDYGGIQNM 169
Query: 119 RSAIVSPWNRKTNNPIYINLY----KKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNL 173
+ W + + IY+N Y K + +V+ + G +L + G + Y
Sbjct: 170 TKEQFADW-KSKDKLIYLNPYGKSLKSAKNNAEVVSDLVAGDILELTAEQGNFYEIAYPD 228
Query: 174 DTEGWIKKQ 182
++ K
Sbjct: 229 GRSAFVPKT 237
>gi|229111099|ref|ZP_04240657.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228672347|gb|EEL27633.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 348
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
>gi|30021774|ref|NP_833405.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|229047360|ref|ZP_04192958.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH676]
gi|229128950|ref|ZP_04257925.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-Cer4]
gi|229146243|ref|ZP_04274618.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST24]
gi|296504177|ref|YP_003665877.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|29897330|gb|AAP10606.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|228637302|gb|EEK93757.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST24]
gi|228654495|gb|EEL10358.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-Cer4]
gi|228723985|gb|EEL75332.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH676]
gi|296325229|gb|ADH08157.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 348
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
>gi|229014407|ref|ZP_04171526.1| hypothetical protein bmyco0001_48100 [Bacillus mycoides DSM 2048]
gi|228747007|gb|EEL96891.1| hypothetical protein bmyco0001_48100 [Bacillus mycoides DSM 2048]
Length = 296
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 24/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L A ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G ++V+ W QI+ DG +++ +N
Sbjct: 50 VGK-LQNGHKLDVLNTENGWSQIKL-DGKDAFVSAEFTKNSYYV----------TANVLN 97
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 98 VRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|226227608|ref|YP_002761714.1| hypothetical protein GAU_2202 [Gemmatimonas aurantiaca T-27]
gi|226090799|dbj|BAH39244.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 325
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 16/146 (10%)
Query: 42 LSHEKEIFEKKPLP---RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ + PLP R+ +KA N R + G + + E + W
Sbjct: 190 VRQQLGGQPPAPLPSTVRYGVVKADTLNVRAA-PAANAARSNIVRLGAILRIHDERDGWY 248
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
++ + W++ V +R T N +N+ P Q +A + +
Sbjct: 249 RLSATNEE--WVSTRY--------VQLVDRATVNADVLNVRSGPGTQFDKLAALARSQEV 298
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ E WC W+ +
Sbjct: 299 FVHERRDGWCRIGQESR--WVAASHL 322
>gi|189467043|ref|ZP_03015828.1| hypothetical protein BACINT_03425 [Bacteroides intestinalis DSM
17393]
gi|189435307|gb|EDV04292.1| hypothetical protein BACINT_03425 [Bacteroides intestinalis DSM
17393]
Length = 400
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I S +N R+ P ++ L G+P+ V++ + W +I+ D I W+++ +
Sbjct: 110 INVSVSNLRVEPDFSSEMMTQGLM-GMPIRVLQR-DGWYRIQTPDNYIAWVHRVGIHPVT 167
Query: 120 SAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDT 175
+ WN + + +Y +P+ S V+ V G L G + Y
Sbjct: 168 KEELHAWNAAEKIVVTSHYGFVYSEPNQTSQAVSDVVAGNRLKWEGSKGAYYKVAYPDGR 227
Query: 176 EGWIKKQ 182
G+I K
Sbjct: 228 TGYISKS 234
>gi|296452451|ref|ZP_06894152.1| cell surface protein [Clostridium difficile NAP08]
gi|296877800|ref|ZP_06901826.1| cell surface protein [Clostridium difficile NAP07]
gi|296258781|gb|EFH05675.1| cell surface protein [Clostridium difficile NAP08]
gi|296431251|gb|EFH17072.1| cell surface protein [Clostridium difficile NAP07]
Length = 501
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+VT + N R I +V+ L G VEV++ W +I+ +G IG+++ S L
Sbjct: 367 YVT-NTDKVNIRSDATIEASVIGA-LNNGDEVEVLEVLKTGWVKIKYNEG-IGYVSGSYL 423
Query: 116 SGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN 172
+ + ++ + + +N+ K P + + + G + E + W
Sbjct: 424 TNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKY 483
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 484 NGGYGYVSNDYL 495
>gi|75759215|ref|ZP_00739316.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493278|gb|EAO56393.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 319
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 22 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 70
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 71 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 116
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ K++ V+ T + EW ++ + G P
Sbjct: 117 LNVRAEANTNSEILGKLKKDDVIETTSQVQNEWLQFEYNGKTAYVHVPFLTGTAP 171
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R ++ L K +E + W Q ++G +++ L+G
Sbjct: 112 VTANVLNVRAEANTNSEILGK-LKKDDVIETTSQVQNEWLQFE-YNGKTAYVHVPFLTGT 169
Query: 119 RSAI-----VSPWNRKTNNPIYI 136
I +P K P
Sbjct: 170 APVIEKQETTAPAKAKVEAPAKA 192
>gi|229197823|ref|ZP_04324539.1| 3D domain protein [Bacillus cereus m1293]
gi|228585541|gb|EEK43643.1| 3D domain protein [Bacillus cereus m1293]
Length = 310
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEIIGKLNKNDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|296447563|ref|ZP_06889485.1| SH3 type 3 domain protein [Methylosinus trichosporium OB3b]
gi|296254951|gb|EFH02056.1| SH3 type 3 domain protein [Methylosinus trichosporium OB3b]
Length = 163
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 16/158 (10%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE- 93
+P++A PR I ++ R GPG + V+ + G V++
Sbjct: 5 PASPLVAALFCVVAAAAAAAPR---IATDVSSMRSGPGARWPVI-AQIPAGAKVQLDNCG 60
Query: 94 ---YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+W Q+ F G +G++ + L+ S++V + P + ++A
Sbjct: 61 PGWKRDWCQVH-FKGKMGFVPANTLAPTSSSVVV---APLVTRDITAVRSGPGNKWKVIA 116
Query: 151 KVEPGVLLTIRECS----GEWCFGYNLDTEGWIKKQKI 184
+ PG + C WC G++ + +
Sbjct: 117 NIPPGRKVAASACQQGWTNGWCKVTYEGKSGYVDRGML 154
>gi|182624213|ref|ZP_02951999.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens D
str. JGS1721]
gi|177910627|gb|EDT72995.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens D
str. JGS1721]
Length = 1049
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 562 SSSLNVRSGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDVTES 619
Query: 116 SGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S +P +N+ S ++ + +TI G
Sbjct: 620 SNSNQGTQTPEKPSNPESTEKTGIVNVSSSLNVRSGASTSSKVIGSLSGNTKVTIVGEEG 679
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 680 AFYKIEYKGSHGYVAKEYI 698
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 477 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDVTES 534
Query: 116 SGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S +P +N+ S ++ + +TI G
Sbjct: 535 SNSNQGTQTPEKPSNPESTEKTGIVNVSSSLNVRSGASTSSKVIGSLSGNTKVTIVGEEG 594
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 595 AFYKIEYKGSHGYVAKEYI 613
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + +G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPRGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + S W ++ + +
Sbjct: 116 NVGLISAKQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|163733836|ref|ZP_02141278.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
gi|161392947|gb|EDQ17274.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + I+A S + + + ++K SR N R GPG Y VV LT+ VEV+ +
Sbjct: 138 FAGSSIVAASTDTSVEKTLR-----SVKGSRVNMRSGPGTQYDVV-AQLTQSAEVEVLTD 191
Query: 94 YEN-WRQIRDFDGT-IGWINKSLLSG 117
N W ++R DG GW+ + LL+G
Sbjct: 192 TGNGWVELRPLDGGPTGWVAEFLLTG 217
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
++ +N+ P Q +VA++ + + + + W + GW+
Sbjct: 152 VEKTLRSVKGSRVNMRSGPGTQYDVVAQLTQSAEVEVLTDTGNGWVELRPLDGGPTGWVA 211
Query: 181 KQKIWG 186
+ + G
Sbjct: 212 EFLLTG 217
>gi|326941392|gb|AEA17288.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 348
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +++ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSII-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
>gi|229169950|ref|ZP_04297643.1| hypothetical protein bcere0007_48870 [Bacillus cereus AH621]
gi|228613468|gb|EEK70600.1| hypothetical protein bcere0007_48870 [Bacillus cereus AH621]
Length = 296
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 24/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L A ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G ++V+ W QI+ DG +++ +N
Sbjct: 50 VGK-LQNGHKLDVLNTENGWSQIKL-DGKDAFVSAEFTKNSYYV----------TANVLN 97
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 98 VRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|224367237|ref|YP_002601400.1| conserved hypothetical protein (SH3-like domain protein)
[Desulfobacterium autotrophicum HRM2]
gi|223689953|gb|ACN13236.1| conserved hypothetical protein (SH3-like domain protein)
[Desulfobacterium autotrophicum HRM2]
Length = 203
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 33 YFYLAP-ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
Y +AP +L + EKE + V++ N R GPG+ Y KG + +
Sbjct: 112 YMVVAPHVLTAAGEKEDSQIVKCKGQVSVTVDMLNVRSGPGMKYEAAFL-AYKGETLNIY 170
Query: 92 KEYENWRQIRDFDGTIGWI 110
+E + W + G +GW+
Sbjct: 171 QESKGWLYVELPSGKLGWV 189
>gi|229031340|ref|ZP_04187344.1| 3D domain protein [Bacillus cereus AH1271]
gi|228729970|gb|EEL80946.1| 3D domain protein [Bacillus cereus AH1271]
Length = 322
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 24/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ L A F L + + I N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPTVESKLV 58
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G ++VV W +I+ +G ++N +N+
Sbjct: 59 GKML-SGNTLDVVNTENGWTKIKL-NGQEAFVNAEFTKSTYYV----------TAGVLNV 106
Query: 139 YKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 107 RAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 158
>gi|269302984|gb|ACZ33084.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN]
Length = 401
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 16/155 (10%)
Query: 20 KILQNSLIFTLAIYFYLAPIL-ALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTV 77
++LQ S++ +P + A + F ++ L F IK + R+ P T+
Sbjct: 2 RMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLLSSFTGEIKGNHVRMRLAPHTDGTI 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +KG V V+ E +++ I G G++ +S + +N
Sbjct: 62 IREF-SKGDLVAVIGESKDYYVISAPPGITGYVFRSFV-----------LDNVVEGEQVN 109
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFG 170
+ +P + ++ ++ G + G+W
Sbjct: 110 VRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEV 144
>gi|229181499|ref|ZP_04308827.1| hypothetical protein bcere0005_48400 [Bacillus cereus 172560W]
gi|228602074|gb|EEK59567.1| hypothetical protein bcere0005_48400 [Bacillus cereus 172560W]
Length = 296
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L+GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLNGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228980237|ref|ZP_04140549.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228779469|gb|EEM27724.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
Length = 335
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +++ L +G EV E + W + GT W+
Sbjct: 217 INGDNVNLRSGPSLQSSII-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 266
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 267 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 314
>gi|266624921|ref|ZP_06117856.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
gi|288863195|gb|EFC95493.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
Length = 376
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 9/127 (7%)
Query: 62 ASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----S 116
N R P + V+ Y G V+++ + W +IR G GW+ L
Sbjct: 92 TDVLNLRAEPSLEGKVLGKCYRGAGG--TVLEKKDGWTKIR-SGGLEGWLKNDYLVFGQD 148
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
K A +++ + P + I+ + E S W + DT
Sbjct: 149 IKPLAKELGLFTARVTTQTLHVRETPSTDAAIIGLAAADDYYPVLEESDGWIRVQLSSDT 208
Query: 176 EGWIKKQ 182
G+I Q
Sbjct: 209 SGYISSQ 215
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL +P ++ ++ K G T+ E W + EGW+K +
Sbjct: 93 DVLNLRAEPSLEGKVLGKCYRGAGGTVLEKKDGWTKIRSGGLEGWLKNDYL 143
>gi|257065950|ref|YP_003152206.1| SH3 type 3 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256797830|gb|ACV28485.1| SH3 type 3 domain protein [Anaerococcus prevotii DSM 20548]
Length = 289
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 11/125 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
KA N R V+ T + E++ + W +I DF+G ++ G
Sbjct: 37 KAKAVNVRSTAEEKNNVIGTINDENKSYEILGKANGWYRI-DFEGKEAFV------GTPW 89
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWI 179
V+ +T N + + S +++ ++ G V+ I E + EG++
Sbjct: 90 FNVT---AETEVIAPANFRDEAQLSSNVISVLQEGDVVEVIEEADNGYVKVKFDGKEGYV 146
Query: 180 KKQKI 184
+
Sbjct: 147 YNNLL 151
>gi|42782061|ref|NP_979308.1| hypothetical protein BCE_3005 [Bacillus cereus ATCC 10987]
gi|42737985|gb|AAS41916.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 570
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 59 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 104
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 105 SSEFTKDIYHVTANLLNVRTEANTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 164
Query: 180 KKQKI 184
+
Sbjct: 165 NVSFL 169
>gi|301163714|emb|CBW23268.1| putative peptidase [Bacteroides fragilis 638R]
Length = 400
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDAKSQSVSDVVAGNRLKYEGKQGGFYKVSYPDGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|265766341|ref|ZP_06094382.1| dipeptidyl peptidase VI [Bacteroides sp. 2_1_16]
gi|263254009|gb|EEZ25474.1| dipeptidyl peptidase VI [Bacteroides sp. 2_1_16]
Length = 400
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDV 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDAKSQSVSDVVAGNRLKYEGKQGGFYKVSYPDGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|253564682|ref|ZP_04842138.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
gi|251946147|gb|EES86524.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
Length = 400
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDAKSQSVSDVVAGNRLKYEGKQGGFYKVSYPDGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|153871565|ref|ZP_02000705.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152071968|gb|EDN69294.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 203
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 32/135 (23%)
Query: 66 NSRIGPGIMYTVVCT--YLTKGLPVEVVKEYENWRQI----------RDFDGTIGWINKS 113
N R P +V Y G V ++ + W +I + D T WI
Sbjct: 68 NVRDVPSGKGQIVSRIPYRVDGTTVHIIDAKKGWFKIDGWQEFNLSAKFNDDTEAWIYGK 127
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV---LLTIRECSGEWCFG 170
LL + LY +P QS I K+ P V + + +C W
Sbjct: 128 LLG------------LDIVGGGVTLYTQPSTQSSIKGKISPEVYENVKKLLDCQDGWLRV 175
Query: 171 YN-----LDTEGWIK 180
GW+
Sbjct: 176 DVKLKNGKRLRGWLA 190
>gi|229193487|ref|ZP_04320434.1| hypothetical protein bcere0002_51310 [Bacillus cereus ATCC 10876]
gi|228590019|gb|EEK47891.1| hypothetical protein bcere0002_51310 [Bacillus cereus ATCC 10876]
Length = 296
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L+GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLNGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|291563563|emb|CBL42379.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 547
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 19/153 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
E + K + V I A N R P + +V L +G E++ E + W QI
Sbjct: 176 EAKTAAKDLVKERVYITADNLNIRETPSMDGNIVGKCL-QGELHELLGETDGWYQI---- 230
Query: 105 GTIGWINKSL------------LSGKRSAIVSPWNRKTNNP-IYINLYKKPDIQSIIVAK 151
+ G+I+ L K + + +N Y+N+ I+ K
Sbjct: 231 -SGGYISADYAEKRFCMNEANKLDMKEMVLNFYDHPGVSNVSNYLNIRAGAGESEKIIGK 289
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I E + W + G++K + I
Sbjct: 290 LPSYAGCEILEDANGWYKISSGGITGYVKSEYI 322
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 7/125 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V+ ++ N R G G ++ L E++++ W +I G G++ +
Sbjct: 267 VSNVSNYLNIRAGAGESEKIIGK-LPSYAGCEILEDANGWYKIS-SGGITGYVKSEYILT 324
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ K +A+ + +N +P + I ++ + E W
Sbjct: 325 GDAAKEAAMSHAELMAIVHADRLNARTEPSTDAKIWTQISENERYHVAEQLDGWVKIEFD 384
Query: 174 -DTEG 177
EG
Sbjct: 385 EGGEG 389
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ K P+ + ++ + G I E W + + EG+ + I
Sbjct: 122 YLNIRKDPNEAANVIGTLSDGSACEILETLEGWYKISSGEVEGYASAEYI 171
>gi|253827962|ref|ZP_04870847.1| hypothetical protein HCAN_1318 [Helicobacter canadensis MIT
98-5491]
gi|313142529|ref|ZP_07804722.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511368|gb|EES90027.1| hypothetical protein HCAN_1318 [Helicobacter canadensis MIT
98-5491]
gi|313131560|gb|EFR49177.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 259
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI--GWIN---- 111
+T K N R P + ++ LT + V+++ W I + GW+
Sbjct: 116 ITSKVPSLNIRQEPNVNSAIIGK-LTPYIQAIVLEDNGEWFLIGASQNSKALGWVVKTYT 174
Query: 112 ----KSLLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ ++S I + T+ +N+ + P Q+ ++ + P + + E +GE
Sbjct: 175 QTLPQKVISQDTEVIKIDLPQFFTSLAPRLNIRQMPSTQAKVLGVLTPEDSVEVLESAGE 234
Query: 167 WCFGY----NLDTEGWIKKQKI 184
W + GW+ ++ +
Sbjct: 235 WVKIQDINPTSNKSGWVMRRFL 256
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 17 YMPKILQNSLIFT--LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
++ QNS + Y P +S + E+ K LP+F T A R N R P
Sbjct: 155 FLIGASQNSKALGWVVKTYTQTLPQKVISQDTEVI-KIDLPQFFTSLAPRLNIRQMPSTQ 213
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLL 115
V+ + VEV++ W +I+D + GW+ + L
Sbjct: 214 AKVLGVLTPEDS-VEVLESAGEWVKIQDINPTSNKSGWVMRRFL 256
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE---GWI 179
V T+ +N+ ++P++ S I+ K+ P + + E +GEW GW+
Sbjct: 110 VENKKIITSKVPSLNIRQEPNVNSAIIGKLTPYIQAIVLEDNGEWFLIGASQNSKALGWV 169
Query: 180 KKQ 182
K
Sbjct: 170 VKT 172
>gi|224419017|ref|ZP_03657023.1| cell-wall amidase lytH precursor [Helicobacter canadensis MIT
98-5491]
Length = 242
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 16/142 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI--GWIN---- 111
+T K N R P + ++ LT + V+++ W I + GW+
Sbjct: 99 ITSKVPSLNIRQEPNVNSAIIGK-LTPYIQAIVLEDNGEWFLIGASQNSKALGWVVKTYT 157
Query: 112 ----KSLLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ ++S I + T+ +N+ + P Q+ ++ + P + + E +GE
Sbjct: 158 QTLPQKVISQDTEVIKIDLPQFFTSLAPRLNIRQMPSTQAKVLGVLTPEDSVEVLESAGE 217
Query: 167 WCFGY----NLDTEGWIKKQKI 184
W + GW+ ++ +
Sbjct: 218 WVKIQDINPTSNKSGWVMRRFL 239
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 17 YMPKILQNSLIFT--LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
++ QNS + Y P +S + E+ K LP+F T A R N R P
Sbjct: 138 FLIGASQNSKALGWVVKTYTQTLPQKVISQDTEVI-KIDLPQFFTSLAPRLNIRQMPSTQ 196
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLL 115
V+ + VEV++ W +I+D + GW+ + L
Sbjct: 197 AKVLGVLTPEDS-VEVLESAGEWVKIQDINPTSNKSGWVMRRFL 239
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE---GWI 179
V T+ +N+ ++P++ S I+ K+ P + + E +GEW GW+
Sbjct: 93 VENKKIITSKVPSLNIRQEPNVNSAIIGKLTPYIQAIVLEDNGEWFLIGASQNSKALGWV 152
Query: 180 KKQ 182
K
Sbjct: 153 VKT 155
>gi|110678711|ref|YP_681718.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
gi|109454827|gb|ABG31032.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + I+A S + + ++K +R N R GPG Y VV LT+ VEV+ +
Sbjct: 138 FAGSSIVASSSDINGEKNLR-----SVKGTRVNMRSGPGTQYDVV-AQLTQSEEVEVLTD 191
Query: 94 YEN-WRQIRDFDGT-IGWINKSLLSG 117
N W ++R +G GW+ + LL+G
Sbjct: 192 TGNGWVELRPLEGGPTGWVAEFLLTG 217
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCF 169
S + S I N ++ +N+ P Q +VA++ + + + + W
Sbjct: 139 AGSSIVASSSDINGEKNLRSVKGTRVNMRSGPGTQYDVVAQLTQSEEVEVLTDTGNGWVE 198
Query: 170 GY--NLDTEGWIKKQKIWG 186
GW+ + + G
Sbjct: 199 LRPLEGGPTGWVAEFLLTG 217
>gi|229179962|ref|ZP_04307307.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228603496|gb|EEK60972.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
Length = 367
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
>gi|324327608|gb|ADY22868.1| hypothetical protein YBT020_18200 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 310
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|75762062|ref|ZP_00741971.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74490452|gb|EAO53759.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 367
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 249 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 298
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 299 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
>gi|238924298|ref|YP_002937814.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Eubacterium rectale
ATCC 33656]
gi|238875973|gb|ACR75680.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Eubacterium rectale
ATCC 33656]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
I + N R V+ E++++ W ++ G++NK L++G
Sbjct: 135 ISSGNLNIRQEASTDSEVIGILTNHNA-CELLEDAGEWYKVT-SGKVTGYVNKQYLVTGD 192
Query: 119 RSAIVSPWNRKTNNPI---YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ ++ KT + +N+ + + ++++V T+ + W D+
Sbjct: 193 EAEAIAEQEIKTVATVNTETLNVRAEKSTDAAVLSQVGNSEAFTVNSVADGWVEISVDDS 252
Query: 176 EGWIKKQKI 184
G+I + +
Sbjct: 253 VGYISQDYV 261
>gi|206969390|ref|ZP_03230345.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
gi|206736431|gb|EDZ53589.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
Length = 348
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
>gi|228911076|ref|ZP_04074883.1| hypothetical protein bthur0013_52160 [Bacillus thuringiensis IBL
200]
gi|228848580|gb|EEM93427.1| hypothetical protein bthur0013_52160 [Bacillus thuringiensis IBL
200]
Length = 296
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228923972|ref|ZP_04087249.1| hypothetical protein bthur0011_49460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835771|gb|EEM81135.1| hypothetical protein bthur0011_49460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 296
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228940790|ref|ZP_04103350.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973710|ref|ZP_04134288.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980266|ref|ZP_04140577.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228779371|gb|EEM27627.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228785956|gb|EEM33957.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818804|gb|EEM64869.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326941425|gb|AEA17321.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 310
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 24/169 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + I N R P + +V
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLVGKV 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G ++V+ W +I+ +G +++ +N+
Sbjct: 50 L-SGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTYYV----------TAGVLNVRAG 97
Query: 142 PDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 98 ANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAIVSPWNRKTNNPIYIN 137
I N
Sbjct: 145 APVIEKKEVVAQEEAPVKN 163
>gi|229082452|ref|ZP_04214915.1| hypothetical protein bcere0023_50690 [Bacillus cereus Rock4-2]
gi|228700884|gb|EEL53407.1| hypothetical protein bcere0023_50690 [Bacillus cereus Rock4-2]
Length = 296
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|222097171|ref|YP_002531228.1| hypothetical protein BCQ_3511 [Bacillus cereus Q1]
gi|221241229|gb|ACM13939.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 310
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|228955485|ref|ZP_04117490.1| hypothetical protein bthur0006_48410 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229072702|ref|ZP_04205904.1| hypothetical protein bcere0025_48630 [Bacillus cereus F65185]
gi|228710678|gb|EEL62651.1| hypothetical protein bcere0025_48630 [Bacillus cereus F65185]
gi|228804277|gb|EEM50891.1| hypothetical protein bthur0006_48410 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|257126577|ref|YP_003164691.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050516|gb|ACV39700.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 207
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P +V L V V + +W +++D G G+I+KS L
Sbjct: 135 STDLDLVNVRKDPNSKSAIV-NELDDNEKVRVTGKNGDWYRVQDSKGNKGYIHKSQLQRN 193
Query: 119 RS 120
+S
Sbjct: 194 QS 195
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLD 174
+ +R+ I K+ + +N+ K P+ +S IV +++ + + +G+W +
Sbjct: 126 TKERTLIT-----KSTDLDLVNVRKDPNSKSAIVNELDDNEKVRVTGKNGDWYRVQDSKG 180
Query: 175 TEGWIKKQKI 184
+G+I K ++
Sbjct: 181 NKGYIHKSQL 190
>gi|308177122|ref|YP_003916528.1| D-alanyl-D-alanine carboxypeptidase [Arthrobacter arilaitensis
Re117]
gi|307744585|emb|CBT75557.1| putative D-alanyl-D-alanine carboxypeptidase [Arthrobacter
arilaitensis Re117]
Length = 475
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 17/134 (12%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R G G V+ T + +G V++ + W Q+R + GW++ LS
Sbjct: 265 NMRTGAGTGNRVLLT-IPRGKSVQLTGSKKSGWYQVR-YSSRTGWVSGKYLSSISMPSKP 322
Query: 125 PWNRKTNNP-------------IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
K + P +N+ +V + G + IR W
Sbjct: 323 KKESKKSTPKQNTSNAKSAKTSANLNMRTGVGTSHRVVLTIPQGKKVAIRGAKKSGWYPV 382
Query: 171 YNLDTEGWIKKQKI 184
GW+ +
Sbjct: 383 KYAGKNGWVSGTYL 396
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 12/134 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLSG-- 117
++ N R G G + VV T + +G V + + W ++ + G GW++ + L
Sbjct: 343 TSANLNMRTGVGTSHRVVLT-IPQGKKVAIRGAKKSGWYPVK-YAGKNGWVSGTYLRSFS 400
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
K S S + +N+ ++ + G ++IR W
Sbjct: 401 SSTYSPKSSDPKSSSSASKKTIANLNMRSGAGTSKRVILTIPKGKKVSIRGAKKSGWYPV 460
Query: 171 YNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 461 KYAGKNGWVSGKYL 474
>gi|110801810|ref|YP_698567.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
domain-containing protein [Clostridium perfringens
SM101]
gi|110682311|gb|ABG85681.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Clostridium perfringens SM101]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 307 SSSLNVREGASTSSKVIGS-LSGNSKVTIVGEEGAFYKIE-YKGSRGYVAKEYVKDVTEN 364
Query: 116 SGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S +P +N+ ++ I S ++ + +TI G
Sbjct: 365 SNSNQGTQTPEKPSIPENTEKIGIVNVSSSLNVRERASISSKVIGSLSGNSKVTIVGEEG 424
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 425 AFYKIEYKGSRGYVAKEYV 443
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 59/179 (32%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCFIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + G V ++ + +NW ++ +DF +G++ + + +
Sbjct: 61 GADSSHEII-TSIPSGARVNIIDKVSDNWYKVGYKDF---VGYVEAKDIRILGYNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + + + W ++ + +
Sbjct: 116 NVALISANQLNVRTSPNENGQVIGTLYKNNKVNVLDKSIDGWYKIDFNGRRAYVSSKYV 174
>gi|47569240|ref|ZP_00239926.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47554114|gb|EAL12479.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|225377124|ref|ZP_03754345.1| hypothetical protein ROSEINA2194_02769 [Roseburia inulinivorans DSM
16841]
gi|225211029|gb|EEG93383.1| hypothetical protein ROSEINA2194_02769 [Roseburia inulinivorans DSM
16841]
Length = 425
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 11/131 (8%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK--RS 120
+ N R G + + + KG + +W I D++GT G+I LS +
Sbjct: 296 DKVNVRSGADTSADKLGS-VEKGTALTRTGTEGDWS-IVDYNGTTGYIKSEFLSAAAPEN 353
Query: 121 AIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL 173
+ + I N+ + V G +T+ + W
Sbjct: 354 VSETAASEALTEGTTIMLSNTTNIRSSMSETADKVGVAYAGEKVTVVMSYAEGWTKVTWK 413
Query: 174 DTEGWIKKQKI 184
+ G+IK +
Sbjct: 414 NKTGYIKTDLL 424
>gi|218898771|ref|YP_002447182.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|228902176|ref|ZP_04066339.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|218545916|gb|ACK98310.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|228857456|gb|EEN01953.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
>gi|153808299|ref|ZP_01960967.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
gi|149129202|gb|EDM20418.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
Length = 336
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ + +S E +P+P + + S N R G + + T G+PV
Sbjct: 13 ILFFCCFLAVVSVTLNAQEIRPMPADSAYGVVHISVCNLRDE-GKFTSGMSTQALLGMPV 71
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD +
Sbjct: 72 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYNEWNRAEKIVVTAHYGFTYEKPDEK 130
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 131 SQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISKS 168
>gi|228909498|ref|ZP_04073323.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228850275|gb|EEM95104.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
>gi|256823368|ref|YP_003147331.1| SH3 type 3 domain-containing protein [Kangiella koreensis DSM
16069]
gi|256796907|gb|ACV27563.1| SH3 type 3 domain protein [Kangiella koreensis DSM 16069]
Length = 196
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENW 97
A + + +V+ R GP Y V + G P+EV+
Sbjct: 16 FAQAADPAQNTDTESQYYVS-DEIGVIMRSGPTNRYRVTGRLVA-GTPIEVLASDTANES 73
Query: 98 RQIRDFDGTIGWINKSLLSGKRSA 121
Q+R DG GWI ++ + +
Sbjct: 74 SQVRTADGDEGWIQSQYVTDQPTV 97
>gi|219849726|ref|YP_002464159.1| SH3 type 3 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219543985|gb|ACL25723.1| SH3 type 3 domain protein [Chloroflexus aggregans DSM 9485]
Length = 147
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L P + F + A+ AN R GPG + +V + V +
Sbjct: 58 VTIILGPSATATPTTAQFIGR--------AATTANMRSGPGTSFPIVTV-VPVDTEVLLE 108
Query: 92 KEYENWRQIRDFDGTIGWINKSLL 115
+ NW +R DG GW++ ++L
Sbjct: 109 GQRANWYIVRLPDGQTGWMSATVL 132
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 17/71 (23%), Gaps = 1/71 (1%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
L +A + N+ P IV V + + W
Sbjct: 62 LGPSATATPTTAQFIGRAATTANMRSGPGTSFPIVTVVPVDTEVLLEGQRANWYIVRLPD 121
Query: 174 DTEGWIKKQKI 184
GW+ +
Sbjct: 122 GQTGWMSATVL 132
>gi|228903714|ref|ZP_04067834.1| hypothetical protein bthur0014_48720 [Bacillus thuringiensis IBL
4222]
gi|228968359|ref|ZP_04129354.1| hypothetical protein bthur0004_51370 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791325|gb|EEM38932.1| hypothetical protein bthur0004_51370 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228855982|gb|EEN00522.1| hypothetical protein bthur0014_48720 [Bacillus thuringiensis IBL
4222]
Length = 298
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGKLKKDDVIETTSQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R ++ L K +E + W Q ++G +++ L+G
Sbjct: 91 VTANVLNVRAEANTNSEILGK-LKKDDVIETTSQVQNEWLQFE-YNGKTAYVHVPFLTGT 148
Query: 119 RSAI-----VSPWNRKTNNPIYI 136
I +P K P
Sbjct: 149 APVIEKQETTAPAKAKVEAPAKA 171
>gi|229130487|ref|ZP_04259443.1| hypothetical protein bcere0015_49200 [Bacillus cereus BDRD-Cer4]
gi|228652826|gb|EEL08708.1| hypothetical protein bcere0015_49200 [Bacillus cereus BDRD-Cer4]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229147771|ref|ZP_04276114.1| hypothetical protein bcere0012_48960 [Bacillus cereus BDRD-ST24]
gi|228635784|gb|EEK92271.1| hypothetical protein bcere0012_48960 [Bacillus cereus BDRD-ST24]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229153399|ref|ZP_04281577.1| hypothetical protein bcere0011_49290 [Bacillus cereus m1550]
gi|228630003|gb|EEK86654.1| hypothetical protein bcere0011_49290 [Bacillus cereus m1550]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|168213042|ref|ZP_02638667.1| putative enterotoxin [Clostridium perfringens CPE str. F4969]
gi|170715374|gb|EDT27556.1| putative enterotoxin [Clostridium perfringens CPE str. F4969]
Length = 947
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 25/122 (20%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T ++ G V+++ E +W ++ +++GT+GW + LS + I K
Sbjct: 732 TIMSNGEKVDILDESGSWYKV-NYNGTMGWCSSQFLSN-PTVISQSSQSKAVEENKTVEM 789
Query: 140 KKP-----------------------DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
KP S ++ + G ++ + E SG W +
Sbjct: 790 NKPVTSTVKIAYIKANGGLWLHSTKDSSASSRISIMNKGSMVRVLEESGSWFKVQHNGNI 849
Query: 177 GW 178
GW
Sbjct: 850 GW 851
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 27/126 (21%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ KG V V++E +W +++ +G IGW + L+ + S N + +
Sbjct: 825 MNKGSMVRVLEESGSWFKVQ-HNGNIGWCSSEFLTNP---VTSQSNTVEESKTVHLVQSN 880
Query: 142 PDIQSIIVAKVEP-----------------------GVLLTIRECSGEWCFGYNLDTEGW 178
+ S+ A+V+ G + I E SG+W GW
Sbjct: 881 TNEASLRSARVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGDWVKVRYNGNTGW 940
Query: 179 IKKQKI 184
K+ I
Sbjct: 941 CAKKFI 946
>gi|229157293|ref|ZP_04285371.1| 3D domain protein [Bacillus cereus ATCC 4342]
gi|228626020|gb|EEK82769.1| 3D domain protein [Bacillus cereus ATCC 4342]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|42782793|ref|NP_980040.1| hypothetical protein BCE_3743 [Bacillus cereus ATCC 10987]
gi|42738720|gb|AAS42648.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|228966578|ref|ZP_04127629.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228793100|gb|EEM40652.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 335
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 217 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 266
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P ++ ++ ++ G + W
Sbjct: 267 SYIQYKHYVATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 314
>gi|228986853|ref|ZP_04146980.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228772802|gb|EEM21241.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|228942379|ref|ZP_04104918.1| hypothetical protein bthur0008_50090 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975310|ref|ZP_04135867.1| hypothetical protein bthur0003_50560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981946|ref|ZP_04142241.1| hypothetical protein bthur0002_51050 [Bacillus thuringiensis Bt407]
gi|228778058|gb|EEM26330.1| hypothetical protein bthur0002_51050 [Bacillus thuringiensis Bt407]
gi|228784443|gb|EEM32465.1| hypothetical protein bthur0003_50560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817423|gb|EEM63509.1| hypothetical protein bthur0008_50090 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W ++ L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229112650|ref|ZP_04242186.1| hypothetical protein bcere0018_48900 [Bacillus cereus Rock1-15]
gi|228670782|gb|EEL26090.1| hypothetical protein bcere0018_48900 [Bacillus cereus Rock1-15]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229046661|ref|ZP_04192309.1| 3D domain protein [Bacillus cereus AH676]
gi|228724670|gb|EEL75979.1| 3D domain protein [Bacillus cereus AH676]
Length = 195
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|30023271|ref|NP_834902.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|29898832|gb|AAP12103.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|42782763|ref|NP_980010.1| glycosy hydrolase family protein [Bacillus cereus ATCC 10987]
gi|42738690|gb|AAS42618.1| glycosyl hydrolase, family 25, putative [Bacillus cereus ATCC
10987]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 10/116 (8%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P+ V I N R GP + +V+ L +G EV E W + GT W+
Sbjct: 222 TPVYGVVIINGDNVNLRSGPSLQSSVI-RQLNRGEAYEVWGEQGGWLCL----GTNQWVY 276
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 277 -----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
>gi|228961496|ref|ZP_04123107.1| hypothetical protein bthur0005_49390 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798210|gb|EEM45212.1| hypothetical protein bthur0005_49390 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 296
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229050908|ref|ZP_04194459.1| hypothetical protein bcere0027_48620 [Bacillus cereus AH676]
gi|228722453|gb|EEL73847.1| hypothetical protein bcere0027_48620 [Bacillus cereus AH676]
Length = 298
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|291529165|emb|CBK94751.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale M104/1]
Length = 396
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
I + N R V+ E++++ W ++ G++NK L++G
Sbjct: 128 ISSGNLNIRQEASTDSEVIGILTNHNA-CELLEDAGEWYKVT-SGKVTGYVNKQYLVTGD 185
Query: 119 RSAIVSPWNRKTNNPI---YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ ++ KT + +N+ + ++ ++++V T+ + W D+
Sbjct: 186 EAEAIAEQEIKTVATVNTETLNVRAEKSTEAAVLSQVGNSEAFTVNSVADGWVEISVDDS 245
Query: 176 EGWIKKQKI 184
G+I + +
Sbjct: 246 VGYISQDYV 254
>gi|197302171|ref|ZP_03167230.1| hypothetical protein RUMLAC_00897 [Ruminococcus lactaris ATCC
29176]
gi|197298602|gb|EDY33143.1| hypothetical protein RUMLAC_00897 [Ruminococcus lactaris ATCC
29176]
Length = 356
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
Query: 67 SRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWI-NKSLLSGKRSAIVS 124
R P T L K VEV++ + W +IR + T G++ + L +G+ + I S
Sbjct: 87 VRSEPDENS--DWTGKLYKDSTVEVLEYLDGWTKIRSGE-TEGYVPTEKLFTGEDARIHS 143
Query: 125 PW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIK 180
N T +N+ + ++ +V G IR E + W + GW+
Sbjct: 144 GEYEENTATVTADRLNVRAGTGTDTEVLTQVSEGETYEIRGEQADGWYPVKVGEINGWV- 202
Query: 181 KQKIWGIY 188
+G Y
Sbjct: 203 ----YGAY 206
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
T+ A R N R G G V+ T +++G E+ E + W ++ + GW+ + ++
Sbjct: 151 ATVTADRLNVRAGTGTDTEVL-TQVSEGETYEIRGEQADGWYPVKVGE-INGWVYGAYVT 208
Query: 117 GKRS 120
+ S
Sbjct: 209 TETS 212
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
++ + + +PD S K+ + + E W + +TEG++ +K++
Sbjct: 79 SDTDDFTYVRSEPDENSDWTGKLYKDSTVEVLEYLDGWTKIRSGETEGYVPTEKLF 134
>gi|206974055|ref|ZP_03234973.1| enterotoxin [Bacillus cereus H3081.97]
gi|206748211|gb|EDZ59600.1| enterotoxin [Bacillus cereus H3081.97]
Length = 500
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + ++ W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|228934218|ref|ZP_04097057.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228825386|gb|EEM71180.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 455
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 46 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 91
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 92 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 151
Query: 180 KKQKI 184
+
Sbjct: 152 NVSFL 156
>gi|217961140|ref|YP_002339708.1| hypothetical protein BCAH187_A3766 [Bacillus cereus AH187]
gi|229140359|ref|ZP_04268914.1| 3D domain protein [Bacillus cereus BDRD-ST26]
gi|217065330|gb|ACJ79580.1| conserved domain protein [Bacillus cereus AH187]
gi|228642920|gb|EEK99196.1| 3D domain protein [Bacillus cereus BDRD-ST26]
Length = 310
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|314973694|gb|EFT17790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL053PA1]
gi|327325763|gb|EGE67557.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA3]
gi|327327109|gb|EGE68889.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA2]
Length = 252
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 21/113 (18%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNP-----I 134
+ NW QIR +G GW ++ L+G K S P ++
Sbjct: 5 HGNWVQIR-ANGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTS 63
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ P + + + G E G W GW + + G
Sbjct: 64 DVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 116
>gi|295114631|emb|CBL35478.1| Bacterial SH3 domain. [butyrate-producing bacterium SM4/1]
Length = 367
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 59/157 (37%), Gaps = 23/157 (14%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E + + I A + N R P V+ + + + +E + W +I
Sbjct: 174 EEAKTAAFDLVDEMAVITADKLNVRSEPNQDAQVL-EQVLRNERYTIEEEQDGWIKI--- 229
Query: 104 DGTIGWINKSLLSGK-----------RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVA 150
G+I+ + + R+ +++ ++ +N Y+N+ ++P I+
Sbjct: 230 --PAGYISSEYVQQRYALNEARKLDLRTMVLNMYDNIGISNVNNYLNIRQEPKEDGKIIG 287
Query: 151 KV---EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K+ G +L E G+W + G++ + I
Sbjct: 288 KMTSKSAGEILETTE-DGKWYKIKSGPVTGYVSSEYI 323
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 11/124 (8%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL----SGKRS 120
N R P ++ L G E++ + E W Q+ G G+I+ + K +
Sbjct: 122 NMRESPDQNADIIGKLL-DGSACEILDDSTEGWYQVT-SGGLTGYISSEYVLTGEEAKTA 179
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A +N+ +P+ + ++ +V TI E W G+I
Sbjct: 180 AFDLVDEMAVITADKLNVRSEPNQDAQVLEQVLRNERYTIEEEQDGWIKIPA----GYIS 235
Query: 181 KQKI 184
+ +
Sbjct: 236 SEYV 239
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + PD + I+ K+ G I + + W + G+I + +
Sbjct: 120 YLNMRESPDQNADIIGKLLDGSACEILDDSTEGWYQVTSGGLTGYISSEYV 170
>gi|283797823|ref|ZP_06346976.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291074510|gb|EFE11874.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|295091963|emb|CBK78070.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Clostridium cf. saccharolyticum K10]
Length = 562
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 59/157 (37%), Gaps = 23/157 (14%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E + + I A + N R P V+ + + + +E + W +I
Sbjct: 174 EEAKTAAFDLVDEMAVITADKLNVRSEPNQDAQVL-EQVLRNERYTIEEEQDGWIKI--- 229
Query: 104 DGTIGWINKSLLSGK-----------RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVA 150
G+I+ + + R+ +++ ++ +N Y+N+ ++P I+
Sbjct: 230 --PAGYISSEYVQQRYALNEARKLDLRTMVLNMYDNIGISNVNNYLNIRQEPKEDGKIIG 287
Query: 151 KV---EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K+ G +L E G+W + G++ + I
Sbjct: 288 KMTSKSAGEILETTE-DGKWYKIKSGPVTGYVSSEYI 323
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 11/124 (8%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL----SGKRS 120
N R P ++ L G E++ + E W Q+ G G+I+ + K +
Sbjct: 122 NMRESPDQNADIIGKLL-DGSACEILDDSTEGWYQVT-SGGLTGYISSEYVLTGEEAKTA 179
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A +N+ +P+ + ++ +V TI E W G+I
Sbjct: 180 AFDLVDEMAVITADKLNVRSEPNQDAQVLEQVLRNERYTIEEEQDGWIKIPA----GYIS 235
Query: 181 KQKI 184
+ +
Sbjct: 236 SEYV 239
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + PD + I+ K+ G I + + W + G+I + +
Sbjct: 120 YLNMRESPDQNADIIGKLLDGSACEILDDSTEGWYQVTSGGLTGYISSEYV 170
>gi|225864930|ref|YP_002750308.1| enterotoxin [Bacillus cereus 03BB102]
gi|225786475|gb|ACO26692.1| enterotoxin [Bacillus cereus 03BB102]
Length = 512
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKSGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|229162648|ref|ZP_04290607.1| 3D domain protein [Bacillus cereus R309803]
gi|228620820|gb|EEK77687.1| 3D domain protein [Bacillus cereus R309803]
Length = 311
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ DG +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIKL-DGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S ++ K+ V+ T + EW G+
Sbjct: 86 YV----------TASVLNVRAGANTGSEVLGKLNKDDVIETTNQVQNEWLQFDYNGKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|291525070|emb|CBK90657.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale DSM 17629]
Length = 396
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
I N R V+ E++++ W ++ G++NK L++G
Sbjct: 128 ISGGNLNIRQEASTDSEVIGILTNHNA-CELLEDAGEWYKVT-SGKVTGYVNKQYLVTGD 185
Query: 119 RSAIVSPWNRKTNNPI---YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ ++ KT + +N+ + ++ ++++V T+ + W D+
Sbjct: 186 EAEAIAEQEIKTVATVNTETLNVRAEKSTEAAVLSQVGNSEAFTVNSVADGWVEISVDDS 245
Query: 176 EGWIKKQKI 184
G+I + +
Sbjct: 246 VGYISQDYV 254
>gi|222096452|ref|YP_002530509.1| hypothetical protein BCQ_2792 [Bacillus cereus Q1]
gi|221240510|gb|ACM13220.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 536
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + ++ W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|168217132|ref|ZP_02642757.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
NCTC 8239]
gi|182380856|gb|EDT78335.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
NCTC 8239]
Length = 1049
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-- 119
+S N R G V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 562 SSSLNVREGASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYIKDVTES 619
Query: 120 --------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + N +N+ + S ++ + +TI G
Sbjct: 620 NNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEG 679
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 680 AFYKIEYKGSHGYVAKEYI 698
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 59/179 (32%), Gaps = 21/179 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------------SRI 69
+ + + L + + + KP+ I S+ N R
Sbjct: 1 MNRNRLSCLIVGAVIGAGAIVCTTNTKVHAKPVNEVKNINTSKGNSFGEIISSEDLGLRK 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPW 126
G + ++ T + +G V ++ + +NW ++ +DF G++ + + +
Sbjct: 61 GADSSHEII-TSIPRGARVNIIDKVSDNWYKVGYKDF---AGYVEAKDIRVLGDNL-NQD 115
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N + +N+ P+ ++ + + + S W ++ + +
Sbjct: 116 NVGLISANQLNVRTSPNENGQVIGTLHKNDKANVLDKSIDGWYKIDFNGRRAYVSSKYV 174
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------ 115
+S N R V+ + L+ V +V E + +I + G+ G++ K +
Sbjct: 392 SSSLNVRSSASTSSKVIGS-LSGNTKVTIVGEEGAFYKIE-YKGSHGYVAKEYVKDVTES 449
Query: 116 ------SGKRSAIVSPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ +P N + + + N+ + S ++ + +TI G
Sbjct: 450 NNSNQGTQTPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEG 509
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 510 AFYKIEYKGSRGYVAKEYV 528
>gi|196032186|ref|ZP_03099600.1| enterotoxin [Bacillus cereus W]
gi|195994937|gb|EDX58891.1| enterotoxin [Bacillus cereus W]
Length = 524
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|239828425|ref|YP_002951049.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
gi|239808718|gb|ACS25783.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
Length = 471
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ A N R GP + V L KG VE++ +W +R G G+++ + LSG
Sbjct: 202 ATVNALTLNVRQGPSTNFDAVAV-LKKGQKVEILHIVGSWAYVR-ASGMEGFVHTAYLSG 259
Query: 118 ------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ I+ P + ++ N ++ DI + KV+
Sbjct: 260 ISQSNPAGPSDKLLEYVKTQTIIIDPGHGGSDPGAVANGLREKDINLSVALKVQ 313
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + T N + +N+ + P VA ++ G + I G W + EG++
Sbjct: 197 TAIQQATVNALTLNVRQGPSTNFDAVAVLKKGQKVEILHIVGSWAYVRASGMEGFVHTAY 256
Query: 184 IWGI 187
+ GI
Sbjct: 257 LSGI 260
>gi|228908720|ref|ZP_04072554.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228850888|gb|EEM95708.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 515
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQIEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|229080969|ref|ZP_04213482.1| 3D domain protein [Bacillus cereus Rock4-2]
gi|228702283|gb|EEL54756.1| 3D domain protein [Bacillus cereus Rock4-2]
Length = 328
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 24/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ L A F L + + I N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLV 58
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G ++V+ W +I+ +G +++ +N+
Sbjct: 59 GKVL-SGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTYYV----------TAGVLNV 106
Query: 139 YKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 107 RAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 99 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 156
Query: 119 RSAI 122
I
Sbjct: 157 APVI 160
>gi|324326927|gb|ADY22187.1| enterotoxin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 650
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + ++ W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|323704282|ref|ZP_08115861.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|323536348|gb|EGB26120.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 231
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R G + V+ + V V+ + W I+ DGT+GWI LS + S+
Sbjct: 40 GNGVNVRNGGNLSSMVITQLNYSDV-VTVIGQDNGWYNIKLSDGTVGWIYGKYLSLRSSS 98
Query: 122 IVSPWNRKTNNPIYI 136
VS + + +
Sbjct: 99 TVSRGDVDRSIASRL 113
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S+L+ + +N+ ++ S+++ ++ ++T+ W
Sbjct: 20 VGSSMLT---HIYAADLGSGVVIGNGVNVRNGGNLSSMVITQLNYSDVVTVIGQDNGWYN 76
Query: 170 GY-NLDTEGWIKKQKI 184
+ T GWI + +
Sbjct: 77 IKLSDGTVGWIYGKYL 92
>gi|313148143|ref|ZP_07810336.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
gi|313136910|gb|EFR54270.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
Length = 323
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 39 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDA 96
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 97 WNKADKIVVTSHYGFTYQQPDEKSQSVSDVVAGNRLKYEGTQGGFYKVSYPNGRQAYISQ 156
Query: 182 Q 182
Sbjct: 157 S 157
>gi|217960397|ref|YP_002338959.1| enterotoxin [Bacillus cereus AH187]
gi|217063289|gb|ACJ77539.1| enterotoxin [Bacillus cereus AH187]
Length = 548
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + ++ W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|123410614|ref|XP_001303741.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121885142|gb|EAX90811.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 328
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 15/120 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GP + L G V V+ +W ++ +F+G G++ +
Sbjct: 39 VNVRNGPSTSNARIG-GLGCGASVPVIGREGSWWKV-NFNGQTGYVYAENVR-------- 88
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P V V L I C + F GW+ +
Sbjct: 89 -VPGVVTSDNGINVRSGPGTNYARVGGVYYRQTLQITNCQNNFYFI----GNGWVYADYV 143
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMY-TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
E +P VT + N R GPG Y V Y + +++ N+ I
Sbjct: 84 AENVRVPGVVTSD-NGINVRSGPGTNYARVGGVYYRQ--TLQITNCQNNFYFI-----GN 135
Query: 108 GWINKSLLS 116
GW+ ++
Sbjct: 136 GWVYADYVA 144
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S +S SA V P + +N+ P + + + G + + G W
Sbjct: 23 SPVSNGASATVIPS-------VGVNVRNGPSTSNARIGGLGCGASVPVIGREGSWWKVNF 75
Query: 173 LDTEGWIKKQKI 184
G++ + +
Sbjct: 76 NGQTGYVYAENV 87
>gi|164688038|ref|ZP_02212066.1| hypothetical protein CLOBAR_01683 [Clostridium bartlettii DSM
16795]
gi|164602451|gb|EDQ95916.1| hypothetical protein CLOBAR_01683 [Clostridium bartlettii DSM
16795]
Length = 1043
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V I + N R P L KG VEVV + ++ +I+ + G + +K +S
Sbjct: 269 VGISTANVNVRTSPNSNIATNKIGKLLKGTKVEVVGQSGDFYKIK-YQGQYAYASKYYIS 327
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDT 175
+ + + + + + S +AK++ G ++++ E + W D+
Sbjct: 328 VTKGLKLDKISEIKLTQDTV-VRELASENSNQIAKLQEGTVVSVVEKLTNNWYKIDLNDS 386
Query: 176 EGWI 179
G+
Sbjct: 387 YGYA 390
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 60 IKASRANSRIGPGIMYT--VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + N R P + ++ L++ +E+V+E ++ +I+ + G ++ KS +S
Sbjct: 413 VTTTSLNVRTEPDTNISTNIIGV-LSQDTKIEIVEEVNDFYKIK-YKGQYAYVAKSYVSV 470
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
K++ + + + + S + ++ G +T+ E W Y +
Sbjct: 471 KQN-MKLDKVADLKLTTDVVVRELASDTSDSIFTLKQGTKVTVVENFLNGWYKIYVNNIY 529
Query: 177 GWI 179
G+I
Sbjct: 530 GYI 532
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 21/181 (11%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR-FVTIKASR--------ANSRIG 70
K+ + + +A+Y + LA E + P+ + T +A N R
Sbjct: 2 KVEKRIIAMIMAMYIGTSNALAQPVSGEKIGEAPINYSYTTARAKTQNGIVIKNVNLRTK 61
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW--------INKSLLSGKRSAI 122
P + + L G V +V + N+ +I G + I ++ + K
Sbjct: 62 PNKTTSKIIRTLKVGEKVIIVGKSGNYYKIEYASGKFAYAYANNYIKIEEAKPNDKPD-- 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
V N + +N+ P+ + + K+ G + + SG++ +
Sbjct: 120 VKLDNNVGISTANVNVRTSPNANIATNKLGKLLKGTKVEVVGKSGDFYKIKYKGQYAYAS 179
Query: 181 K 181
K
Sbjct: 180 K 180
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
+ +K+ R + T L++G V VV++ NW +I DG I +
Sbjct: 197 IKLKSDIV-VRELASTSSKQIST-LSQGTVVSVVEKLTNNWYKIELNDGYGYAIIEDKSD 254
Query: 117 GKRSAI--VSPWNRKTNNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYN 172
K + V N + +N+ P+ + + K+ G + + SG++
Sbjct: 255 DKPNDKPDVKLDNNVGISTANVNVRTSPNSNIATNKIGKLLKGTKVEVVGQSGDFYKIKY 314
Query: 173 LDTEGWIKK 181
+ K
Sbjct: 315 QGQYAYASK 323
>gi|242278732|ref|YP_002990861.1| SH3 type 3 domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121626|gb|ACS79322.1| SH3 type 3 domain protein [Desulfovibrio salexigens DSM 2638]
Length = 588
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR--DFDGTIGWINKSLLSGKRSAIV 123
N R +V L K VE++ + NW +++ D G G+I L++
Sbjct: 57 NVREVSSSKADIV-DILAKNTQVELIGKNGNWYKVKRVDGSGQPGFIYHKLINLD---FG 112
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + N +Y+ P I S V + P I + D EG+ +
Sbjct: 113 NYLGTRGRNKEKTVVYQSPSINSPSVRIISPQTTFDIMGIENNFYLIKGEDFEGYAPTK 171
>gi|254722926|ref|ZP_05184714.1| hypothetical protein BantA1_10704 [Bacillus anthracis str. A1055]
Length = 540
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|53714039|ref|YP_100031.1| dipeptidyl peptidase VI [Bacteroides fragilis YCH46]
gi|52216904|dbj|BAD49497.1| dipeptidyl peptidase VI [Bacteroides fragilis YCH46]
Length = 400
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDEKSQSVSDVVVGNRLKYEGKQGGFYKVSYPDGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|218230956|ref|YP_002368489.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
gi|218158913|gb|ACK58905.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
Length = 348
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GP + +V+ L +G EV E + W + GT W+
Sbjct: 230 INGDNVNLRSGPSLQSSVI-RQLNRGETYEVWGEQDGWLCL----GTNQWVY-----NDP 279
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + ++ ++ G + W
Sbjct: 280 SYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDRW 327
>gi|206969225|ref|ZP_03230180.1| conserved domain protein [Bacillus cereus AH1134]
gi|228953992|ref|ZP_04116021.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071212|ref|ZP_04204436.1| 3D domain protein [Bacillus cereus F65185]
gi|229151916|ref|ZP_04280112.1| 3D domain protein [Bacillus cereus m1550]
gi|229179992|ref|ZP_04307336.1| 3D domain protein [Bacillus cereus 172560W]
gi|206736266|gb|EDZ53424.1| conserved domain protein [Bacillus cereus AH1134]
gi|228603201|gb|EEK60678.1| 3D domain protein [Bacillus cereus 172560W]
gi|228631471|gb|EEK88104.1| 3D domain protein [Bacillus cereus m1550]
gi|228711833|gb|EEL63784.1| 3D domain protein [Bacillus cereus F65185]
gi|228805558|gb|EEM52148.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 316
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPNVESKLVGKVL-SGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|255010344|ref|ZP_05282470.1| dipeptidyl peptidase VI [Bacteroides fragilis 3_1_12]
Length = 400
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW +I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYRIQTPDNYIAWVHRVGIHPVTKAGLDA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDEKSQSVSDVVAGNRLKYEGTQGGFYKVSYPNGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|229191838|ref|ZP_04318809.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228591600|gb|EEK49448.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 316
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 52/169 (30%), Gaps = 24/169 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + + I N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETIVT-----------TDVLNVRENPNVESKLVGKV 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G ++V+ W +I+ +G +++ +N+
Sbjct: 50 L-SGNTLDVINTENGWTKIKL-NGKEAFVSAEFTKSTYYV----------TAGVLNIRAG 97
Query: 142 PDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 98 ANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPYLTGTAP 146
>gi|120554798|ref|YP_959149.1| SH3 type 3 domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324647|gb|ABM18962.1| SH3, type 3 domain protein [Marinobacter aquaeolei VT8]
Length = 222
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y ++ + G P+EV++ E++ ++R GT GW++ LS + A
Sbjct: 35 VRSGAGSQYRIIENAVPSGTPLEVLETGESYTRVRTPKGTEGWVSSQYLSNEPIA 89
>gi|237718431|ref|ZP_04548912.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|293371425|ref|ZP_06617856.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
gi|229452364|gb|EEO58155.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|292633622|gb|EFF52180.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
Length = 326
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + + ++ + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILLFYCFLATMAASLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|331701366|ref|YP_004398325.1| cell wall hydrolase/autolysin [Lactobacillus buchneri NRRL B-30929]
gi|329128709|gb|AEB73262.1| cell wall hydrolase/autolysin [Lactobacillus buchneri NRRL B-30929]
Length = 280
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+K ++ N R GP + Y+V + G ++V+ NW ++ TIGW+ L+
Sbjct: 33 VTVKVNQLNIRSGPDVTYSVK-AKVQHGQRLQVISRKSNWIKVIYKHRTIGWVASWLV-- 89
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ S + + + + + D +
Sbjct: 90 QNSNVQNVSSLSEATIVLDPGHGGSDTGA 118
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 109 WINKSLLSGKRSAIVS--------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
W NKS + + I++ N T +N+ PD+ + AKV+ G L +
Sbjct: 5 WENKSWIVATLTIIITFLVLIVSLESNSVTVKVNQLNIRSGPDVTYSVKAKVQHGQRLQV 64
Query: 161 RECSGEWCFGYNLDTE-GWIK 180
W GW+
Sbjct: 65 ISRKSNWIKVIYKHRTIGWVA 85
>gi|163941282|ref|YP_001646166.1| glycoside hydrolase family protein [Bacillus weihenstephanensis
KBAB4]
gi|163863479|gb|ABY44538.1| glycoside hydrolase family 25 [Bacillus weihenstephanensis KBAB4]
Length = 348
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ L +G EV E W + GT
Sbjct: 218 PNNATPVYGVAVINGDNVNLRSGPSLQSSVI-RQLNRGESYEVWGEQNGWLCL----GTN 272
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
W+ S I T +NL P + ++ ++ G + W
Sbjct: 273 QWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
>gi|163937994|ref|YP_001642879.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865849|gb|ABY46904.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
Length = 311
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 40/151 (26%), Gaps = 23/151 (15%)
Query: 49 FEKKPLPRFVT------IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
P+P + I + N R GPG Y V+ L KG +V E W +
Sbjct: 165 VAPTPIPPSTSGTGIAYINGNNVNLRKGPGTGYEVI-RQLVKGESYQVFGESNGWLNL-- 221
Query: 103 FDGTIGWINK-----SLLSGKRSAIVSPWNRKTN----NPIYINLYKKPDIQSIIVAKVE 153
G W+ G A N + + P IV V
Sbjct: 222 --GRDQWVYNDSSYIRYTGGNAPATSQSSNDDVGVVTITADVLRVRTGPGTNYGIVKNVY 279
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
C W W+ + +
Sbjct: 280 QSERYQSWGCKDGWYNV---GGNQWVSGEYV 307
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Query: 58 VTIKASRANSRIGPGIMYTV-VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VTI A R GPG Y + Y ++ + + W + G W++ +
Sbjct: 255 VTITADVLRVRTGPGTNYGIVKNVYQSERY--QSWGCKDGWYNV----GGNQWVSGEYVK 308
Query: 117 GKR 119
+R
Sbjct: 309 FER 311
>gi|229087716|ref|ZP_04219839.1| hypothetical protein bcere0022_42760 [Bacillus cereus Rock3-44]
gi|228695551|gb|EEL48413.1| hypothetical protein bcere0022_42760 [Bacillus cereus Rock3-44]
Length = 290
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTTSAQAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W QI+ L GK + + + +
Sbjct: 50 VGKLLN-GHKLDVTNTENGWSQIK-------------LDGKDVFVSAEFTKSIYYVTADV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTHQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|49479578|ref|YP_037029.1| hypothetical protein BT9727_2705 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331134|gb|AAT61780.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 524
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|206978454|ref|ZP_03239319.1| conserved domain protein [Bacillus cereus H3081.97]
gi|206743334|gb|EDZ54776.1| conserved domain protein [Bacillus cereus H3081.97]
Length = 310
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++VV W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVVNTENGWTKIKL-NGQEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW + G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEIIGKLNKNDVIETTNQVQNEWLQFDYNEKTGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 6/98 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++ G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEIIGK-LNKNDVIETTNQVQNEWLQF-DYNEKTGYVHVPFLTGT 144
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
I ++ ++S V K + V
Sbjct: 145 APVI---EKKEVATKEEAPERVNTPVKSNKVVKSKESV 179
>gi|332143110|ref|YP_004428848.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
gi|327553132|gb|AEA99850.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
Length = 258
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 13/142 (9%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ K L +LI F L I L + + L FV GPG Y
Sbjct: 58 HMIRKWLAAALIACSFQAFSLQDIADLEASSSHYIRDDLFIFV---------HTGPGRNY 108
Query: 76 TVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS-AIVSPWNRKTNN 132
++ + + G P+ V+ + + QI D +G GW+ +S S A P +
Sbjct: 109 RILGS-IEAGTPITVLARDNDAEFTQITDPEGRKGWVESKFVSNTMSQAEQLPIISEKLA 167
Query: 133 PIYINLYKKPDIQSIIVAKVEP 154
+L + + ++
Sbjct: 168 ESQSSLQTLQSDNAKLRQQLND 189
>gi|149182097|ref|ZP_01860581.1| hypothetical protein BSG1_08756 [Bacillus sp. SG-1]
gi|148850199|gb|EDL64365.1| hypothetical protein BSG1_08756 [Bacillus sp. SG-1]
Length = 229
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 13/141 (9%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY----ENWRQIRDFDGTIG 108
LP V G Y VV T + G ++V+ +Y W ++ G
Sbjct: 88 ALPSTVYTINDNVTIHSGATRQYKVVAT-KSHGSSLKVIDKYTTSMGLWYRVELSSTVKG 146
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----- 163
WI +S + + +P + ++L I + G L +
Sbjct: 147 WIYSGDVSTTKQS--NPAPTQVVTKSDVHLRAGATTNYTIKTTIPGGTTLKYIQSFKNTL 204
Query: 164 SGEWCFGY-NLDTEGWIKKQK 183
W + GWI
Sbjct: 205 GETWYNVEMSNGDRGWIISSL 225
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFD 104
+ P P V K+ + R G YT+ T + G ++ ++ ++N W + +
Sbjct: 158 QSNPAPTQVVTKSD-VHLRAGATTNYTIKTT-IPGGTTLKYIQSFKNTLGETWYNVEMSN 215
Query: 105 GTIGWINKSL 114
G GWI SL
Sbjct: 216 GDRGWIISSL 225
>gi|299149077|ref|ZP_07042139.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
gi|298513838|gb|EFI37725.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
Length = 326
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 7/158 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ +++ ++A S + + P + + S N R G + + T G+PV
Sbjct: 5 ILLFYCFLAMMAASLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|160882658|ref|ZP_02063661.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
gi|156111973|gb|EDO13718.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
Length = 326
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + + ++ + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILLFYCFLATMAASLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|83855002|ref|ZP_00948532.1| hypothetical protein NAS141_09741 [Sulfitobacter sp. NAS-14.1]
gi|83842845|gb|EAP82012.1| hypothetical protein NAS141_09741 [Sulfitobacter sp. NAS-14.1]
Length = 217
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
++I +L + + + + + R V+ +R N R GPG + VV L +
Sbjct: 125 AIIPSLIVPNDSGAAIVEARAETNLSSEADIRSVS--GNRVNVRGGPGTEFQVVSK-LGR 181
Query: 85 GLPVEVVKEYEN-WRQIRDFDGT-IGWINKSLLSG 117
G VE++++ + W ++R DG GW+ LLS
Sbjct: 182 GDSVEIIQDNGDGWVKMRPVDGGPEGWMADFLLSN 216
>gi|228904273|ref|ZP_04068368.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
gi|228931244|ref|ZP_04094180.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228828526|gb|EEM74226.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228855358|gb|EEM99922.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
Length = 747
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 42/150 (28%), Gaps = 33/150 (22%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-----K 112
+T+ N R G G Y VV L KG +V+ + W +I W+
Sbjct: 448 LTVNGYGVNVRSGAGQNYGVV-DKLNKGREFKVLSIKDGWYEIE----KGKWVFFNPSWI 502
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIVAKVE 153
L V P + P + L +V K +
Sbjct: 503 KLTYNAYDKPVQPEQKPEQKPEQKPEQPQVQQGKKIVINGQGVRLRSGAGTNHGVVGKAQ 562
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G + E S W +GWI
Sbjct: 563 YGRTYDVLEESNGWVKTS----DGWIYNDS 588
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 38/143 (26%), Gaps = 28/143 (19%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ I R G G + VV G +V++E W + D GWI S
Sbjct: 538 IVINGQGVRLRSGAGTNHGVVGK-AQYGRTYDVLEESNGWVKTSD-----GWIYNDS-SY 590
Query: 118 KRSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
R+ + + + + ++ V G T+
Sbjct: 591 IRTINNGGGNTNQGGNTGGNQVQQTGKKIIVKGNGVRVRSGAGQNHGVLGYVSYGQEFTV 650
Query: 161 RECSGEWCFGYNLDTEGWIKKQK 183
S W GWI
Sbjct: 651 EAESNGWVKTS----RGWIYNDS 669
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ S R G G+ Y V Y +KG V E W ++ GWI
Sbjct: 693 VNGSGVRMRHGAGLNYGVSG-YASKGKTYTVHAESNGWVKV-----DGGWIY 738
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
SP + T N +N+ +V K+ G + W W+
Sbjct: 443 SPNIKLTVNGYGVNVRSGAGQNYGVVDKLNKGREFKVLSIKDGWYEIEKGK---WV 495
>gi|228928006|ref|ZP_04091051.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228831696|gb|EEM77288.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 480
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 81 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|218904080|ref|YP_002451914.1| enterotoxin [Bacillus cereus AH820]
gi|218538451|gb|ACK90849.1| enterotoxin [Bacillus cereus AH820]
Length = 488
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|229047394|ref|ZP_04192990.1| 3D domain protein [Bacillus cereus AH676]
gi|228723959|gb|EEL75308.1| 3D domain protein [Bacillus cereus AH676]
Length = 328
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 24/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ L A F L + + I N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLV 58
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ G ++V+ W +I+ +G +++ +N+
Sbjct: 59 GK-VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTYYV----------TAGVLNV 106
Query: 139 YKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 107 RAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 99 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 156
Query: 119 RSAI 122
I
Sbjct: 157 APVI 160
>gi|260173879|ref|ZP_05760291.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|315922143|ref|ZP_07918383.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|313696018|gb|EFS32853.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
Length = 326
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ +++ ++A S + + P + + S N R G + + T G+PV
Sbjct: 5 ILLFYCFLAMMAASLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D IGW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYIGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|301054472|ref|YP_003792683.1| putative enterotoxin [Bacillus anthracis CI]
gi|300376641|gb|ADK05545.1| putative enterotoxin [Bacillus cereus biovar anthracis str. CI]
Length = 504
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 81 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|229134479|ref|ZP_04263292.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST196]
gi|228649100|gb|EEL05122.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST196]
Length = 335
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ L +G EV E W + GT
Sbjct: 205 PNNATPVYGVAVINGDNVNLRSGPSLQSSVI-RQLNRGESYEVWGEQNGWLCL----GTN 259
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
W+ S I T +NL P + ++ ++ G + W
Sbjct: 260 QWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 314
>gi|218898813|ref|YP_002447224.1| hypothetical protein BCG9842_B1487 [Bacillus cereus G9842]
gi|228902216|ref|ZP_04066377.1| 3D domain protein [Bacillus thuringiensis IBL 4222]
gi|218541834|gb|ACK94228.1| conserved domain protein [Bacillus cereus G9842]
gi|228857416|gb|EEN01915.1| 3D domain protein [Bacillus thuringiensis IBL 4222]
Length = 310
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + I N R P + +V
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLVGKV 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V+ W +I+ L+GK + + + + R T +N+
Sbjct: 50 L-SGNTLDVINTENGWTKIK-------------LNGKEAFVSAEFTRSTYYVTAGVLNVR 95
Query: 140 KKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 96 AGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|123477391|ref|XP_001321863.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121904698|gb|EAY09640.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 294
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 15/127 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+ N R GPG V+ G + V NW Q+ +F+G G+ + L
Sbjct: 37 VSAGGVGLNIRSGPGTNNPVIGP-AADGSTLSVTGYSNNWWQV-NFNGRTGYCSADYL-- 92
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
N + N+ I +N+ P V + G + I+ S W +G
Sbjct: 93 -------IVNGQVNSNIGVNIRAGPGTNYGRVGGLGNGAGIKIKGISSNWFKID----QG 141
Query: 178 WIKKQKI 184
W+ I
Sbjct: 142 WVCADYI 148
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + +G + +VS + +N+ P + ++ G L++ S W
Sbjct: 25 HYAEANGAGTGVVSAG------GVGLNIRSGPGTNNPVIGPAADGSTLSVTGYSNNWWQV 78
Query: 171 YNLDTEGWIKKQKI 184
G+ +
Sbjct: 79 NFNGRTGYCSADYL 92
>gi|260495008|ref|ZP_05815137.1| glutaminase [Fusobacterium sp. 3_1_33]
gi|260197451|gb|EEW94969.1| glutaminase [Fusobacterium sp. 3_1_33]
Length = 155
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 56 RFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-----IGW 109
RFV + K AN R V+ + ++ + +W + F G+
Sbjct: 21 RFVVSSKDGYANLRKEATTNSKVIMKVDNS-TQITLLFKNGDWYYVEIFKNNPLLYAEGY 79
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+KS L V + Y NL + I S I+ ++ G +T + GEW
Sbjct: 80 IHKSQLELHPETYVVF-----SKDGYANLRRGTTINSEILDVLDNGEYVTKLDEVGEWYR 134
Query: 170 GYNLDTE-GWIKKQKI 184
+ G+I K ++
Sbjct: 135 VEYAAFDGGYIHKSQL 150
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P V K AN R G I ++ L G V + E W ++ G+I+K
Sbjct: 89 PETYVVFSKDGYANLRRGTTINSEIL-DVLDNGEYVTKLDEVGEWYRVEYAAFDGGYIHK 147
Query: 113 SLLSG 117
S L
Sbjct: 148 SQLKK 152
>gi|256028489|ref|ZP_05442323.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
gi|289766409|ref|ZP_06525787.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
gi|289717964|gb|EFD81976.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
Length = 155
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 56 RFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-----IGW 109
RFV + K AN R V+ + ++ + +W + F G+
Sbjct: 21 RFVVSSKDGYANLRKEATTNSKVIMKVDNS-TQITLLFKNGDWYYVEIFKNNPLLYAEGY 79
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+KS L V + Y NL + I S I+ ++ G +T + GEW
Sbjct: 80 IHKSQLELHPETYVVF-----SKDGYANLRRGTTINSEILDVLDNGEYVTKLDEVGEWYR 134
Query: 170 GYNLDTE-GWIKKQKI 184
+ G+I K ++
Sbjct: 135 VEYAAFDGGYIHKSQL 150
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P V K AN R G I ++ L G V + E W ++ G+I+K
Sbjct: 89 PETYVVFSKDGYANLRRGTTINSEIL-DVLDNGEYVTKLDEVGEWYRVEYAAFDGGYIHK 147
Query: 113 SLLSG 117
S L
Sbjct: 148 SQLKK 152
>gi|237743372|ref|ZP_04573853.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 7_1]
gi|229433151|gb|EEO43363.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 7_1]
Length = 155
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 56 RFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-----IGW 109
RFV + K AN R V+ + ++ + +W + F G+
Sbjct: 21 RFVVSSKDGYANLRKEATTNSKVIMKVDNS-TQITLLFKNGDWYYVEIFKNNPLLYAEGY 79
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I+KS L V + Y NL + I S I+ ++ G +T + GEW
Sbjct: 80 IHKSQLELHPETYVVF-----SKDGYANLRRGTTINSEILDVLDNGEYVTKLDEVGEWYR 134
Query: 170 GYNLDTE-GWIKKQKI 184
+ G+I K ++
Sbjct: 135 VEYAAFDGGYIHKSQL 150
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P V K AN R G I ++ L G V + E W ++ G+I+K
Sbjct: 89 PETYVVFSKDGYANLRRGTTINSEIL-DVLDNGEYVTKLDEVGEWYRVEYAAFDGGYIHK 147
Query: 113 SLLSG 117
S L
Sbjct: 148 SQLKK 152
>gi|228959924|ref|ZP_04121589.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228799667|gb|EEM46619.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 316
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 24/169 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + + I N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETIVT-----------TDVLNVRENPNVESKLVGK- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ G ++V+ W +I+ +G +++ +N+
Sbjct: 49 VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTYYV----------TAGVLNVRAG 97
Query: 142 PDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 98 ANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|118478290|ref|YP_895441.1| hypothetical protein BALH_2651 [Bacillus thuringiensis str. Al
Hakam]
gi|118417515|gb|ABK85934.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 504
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 81 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|83941525|ref|ZP_00953987.1| hypothetical protein EE36_04813 [Sulfitobacter sp. EE-36]
gi|83847345|gb|EAP85220.1| hypothetical protein EE36_04813 [Sulfitobacter sp. EE-36]
Length = 217
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
++I +L + + + + + R V+ +R N R GPG + VV L +
Sbjct: 125 AIIPSLIVPNDSGAAIVEARAETNLSSEADIRSVS--GNRVNVRGGPGTEFQVVSK-LGR 181
Query: 85 GLPVEVVKEYEN-WRQIRDFDGT-IGWINKSLLSG 117
G VE++++ + W ++R DG GW+ LLS
Sbjct: 182 GDSVEIIQDNGDGWVKMRPVDGGPEGWMADFLLSN 216
>gi|254760811|ref|ZP_05212835.1| hypothetical protein BantA9_21086 [Bacillus anthracis str.
Australia 94]
Length = 404
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|227814229|ref|YP_002814238.1| enterotoxin [Bacillus anthracis str. CDC 684]
gi|227006931|gb|ACP16674.1| enterotoxin [Bacillus anthracis str. CDC 684]
Length = 416
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|196042616|ref|ZP_03109855.1| enterotoxin [Bacillus cereus 03BB108]
gi|196026100|gb|EDX64768.1| enterotoxin [Bacillus cereus 03BB108]
Length = 500
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|218233993|ref|YP_002368519.1| hypothetical protein BCB4264_A3815 [Bacillus cereus B4264]
gi|218161950|gb|ACK61942.1| conserved domain protein [Bacillus cereus B4264]
Length = 316
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V + G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPNVESKLVGK-VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|123508408|ref|XP_001329633.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912679|gb|EAY17498.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 325
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ N R GP ++ + G V V +W Q+ ++G G+ +
Sbjct: 31 VCTSSNGINIRNGPSTSNGILGA-IGYGACVPVTGRSGDWWQVS-YNGQTGYCYSEYVRV 88
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N + + P IV+ + G + I + S W + G
Sbjct: 89 PGTV---------NANSGLYVRSGPGTGYGIVSSLANGATVQITKVSNNWFYV----GNG 135
Query: 178 W 178
W
Sbjct: 136 W 136
>gi|224368254|ref|YP_002602417.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
gi|223690970|gb|ACN14253.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
Length = 204
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++++L FT+ I I + + ++ K + + R GPG+ + ++
Sbjct: 1 MKSTLNFTIFILILSTLICGTALGETVYVKGIM---------KITMRTGPGVEHKII-AM 50
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-SGKRSAIVSPWNRKTNNPIYINLYK 140
L G +E+++ + W +R+ DG GW+ + S +++ + N+ + + K
Sbjct: 51 LESGDNLELIESGDGWSHVRNVDGKDGWVLTRYVTSEVPKTLIADRLKSENSALSEVIEK 110
Query: 141 KPDIQSI---IVAKVE 153
+ I AK E
Sbjct: 111 VKAENAELAGIKAKFE 126
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
I + P ++ I+A +E G L + E W +GW+ + +
Sbjct: 35 ITMRTGPGVEHKIIAMLESGDNLELIESGDGWSHVRNVDGKDGWVLTRYV 84
>gi|229128992|ref|ZP_04257965.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|229146285|ref|ZP_04274658.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228637183|gb|EEK93640.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228654229|gb|EEL10094.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 316
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V + G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPNVESKLVGK-VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|229145550|ref|ZP_04273933.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228637796|gb|EEK94243.1| 3D domain protein [Bacillus cereus BDRD-ST24]
Length = 501
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|89898150|ref|YP_515260.1| cell wall-associated hydrolases [Chlamydophila felis Fe/C-56]
gi|89331522|dbj|BAE81115.1| cell wall-associated hydrolases [Chlamydophila felis Fe/C-56]
Length = 409
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
IK +R R+ P + ++V L+KG + V+ E +++ + +G G++ ++ +
Sbjct: 48 IKGNRVRLRLAPHVDSSIV-KELSKGDYIAVIGESKDYYVVSAPEGIKGYVFRTFV---- 102
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFG 170
+N+ +P + ++ ++ G + T RE G+W
Sbjct: 103 -------LDNVIEGEQVNVRLEPSTSAPVLTRLSRGTEIQTTSRESQGKWLEI 148
>gi|229018878|ref|ZP_04175723.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1273]
gi|229025118|ref|ZP_04181545.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1272]
gi|228736228|gb|EEL86796.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1272]
gi|228742411|gb|EEL92566.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1273]
Length = 335
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P+ I N R GP + +V+ L +G EV E + W + G
Sbjct: 203 PTPNNATPVYGVAVINGDNVNLRSGPSLQSSVI-RQLHRGESYEVWGEQDGWLCL----G 257
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
W+ S I T +NL P + ++ ++ G +
Sbjct: 258 KNQWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQD 312
Query: 166 EW 167
W
Sbjct: 313 GW 314
>gi|260576825|ref|ZP_05844809.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259020968|gb|EEW24280.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 334
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQK 183
+NL P ++ ++ G ++ C G WC + GW+ +
Sbjct: 156 TGLATGDTLNLRAGPSTGDAVLGRLLAGAVVRNLGCRGGTGQRWCKVESGGLRGWVAGRY 215
Query: 184 I 184
+
Sbjct: 216 L 216
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDGTIGWINKSLLS 116
N R GP V+ L G V + W ++ G GW+ L
Sbjct: 160 TGDTLNLRAGPSTGDAVLGRLLA-GAVVRNLGCRGGTGQRWCKVE-SGGLRGWVAGRYL- 216
Query: 117 GKRSAIVSPWNRKTNNPIYIN 137
+ +A +P T N
Sbjct: 217 -RETASPAPVPPATRPRPVAN 236
>gi|228915553|ref|ZP_04079142.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228844200|gb|EEM89260.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 464
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|158522699|ref|YP_001530569.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158511525|gb|ABW68492.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 676
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 66 NSRIGPGIMYTVVCTYLTK--GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R PG+ VV +EV+++ W +IR DGT G++ K +A++
Sbjct: 22 NIRSRPGLNAGVVGKLTASETSTALEVLEK---WVKIRKSDGTEGFVFKEY-----TAVI 73
Query: 124 SPWNRK----------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
P T +N+ +P + + +V K+ T+ E W
Sbjct: 74 QPEQAPEEALMPDPPSEKPVLLTATVPVLNIRSRPGLNADVVGKLTASETSTVLEVLEAW 133
Query: 168 CFGY-NLDTEGWIKKQ 182
+ TEG++ KQ
Sbjct: 134 VKIRKSDGTEGFVFKQ 149
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ P A P +T N R PG+ VV LT V++
Sbjct: 70 TAVIQPEQAPEEALMPDPPSEKPVLLTATVPVLNIRSRPGLNADVVGK-LTASETSTVLE 128
Query: 93 EYENWRQIRDFDGTIGWINKSL--LS----GKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E W +IR DGT G++ K LS KRSA + + D
Sbjct: 129 VLEAWVKIRKSDGTEGFVFKQYARLSERHPEKRSADQKTNKGSDAGTLQEDRLAGADTD 187
>gi|229026685|ref|ZP_04183026.1| hypothetical protein bcere0029_49540 [Bacillus cereus AH1272]
gi|228734637|gb|EEL85290.1| hypothetical protein bcere0029_49540 [Bacillus cereus AH1272]
Length = 295
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V+ W QI+ L+GK + + + + + +
Sbjct: 50 VGK-LQNGHKLDVLNTENGWSQIK-------------LNGKDAFVSAEFTKNSYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|65320239|ref|ZP_00393198.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 440
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 81 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|52142561|ref|YP_084271.1| hypothetical protein BCZK2684 [Bacillus cereus E33L]
gi|51976030|gb|AAU17580.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 524
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
+ + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SAEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|170685405|ref|ZP_02876629.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|254685522|ref|ZP_05149382.1| hypothetical protein BantC_16925 [Bacillus anthracis str.
CNEVA-9066]
gi|170670765|gb|EDT21504.1| conserved domain protein [Bacillus anthracis str. A0465]
Length = 428
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|165869036|ref|ZP_02213696.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|254752296|ref|ZP_05204332.1| hypothetical protein BantV_07501 [Bacillus anthracis str. Vollum]
gi|164715762|gb|EDR21279.1| conserved domain protein [Bacillus anthracis str. A0488]
Length = 426
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 17 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 62
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 63 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 122
Query: 180 KKQKI 184
+
Sbjct: 123 NVSFL 127
>gi|228921618|ref|ZP_04084937.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838020|gb|EEM83342.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 498
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTADLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|30021068|ref|NP_832699.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|229128295|ref|ZP_04257276.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|29896621|gb|AAP09900.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|228655154|gb|EEL11011.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 495
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|30262924|ref|NP_845301.1| hypothetical protein BA_2967 [Bacillus anthracis str. Ames]
gi|47528260|ref|YP_019609.1| hypothetical protein GBAA_2967 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185762|ref|YP_029014.1| hypothetical protein BAS2756 [Bacillus anthracis str. Sterne]
gi|167637770|ref|ZP_02396049.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170704768|ref|ZP_02895234.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177649581|ref|ZP_02932583.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|229600932|ref|YP_002867211.1| hypothetical protein BAA_3020 [Bacillus anthracis str. A0248]
gi|254737979|ref|ZP_05195682.1| hypothetical protein BantWNA_22709 [Bacillus anthracis str. Western
North America USA6153]
gi|30257557|gb|AAP26787.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47503408|gb|AAT32084.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49179689|gb|AAT55065.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|167514319|gb|EDR89686.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170130569|gb|EDS99430.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|172084655|gb|EDT69713.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|229265340|gb|ACQ46977.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 440
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|114319527|ref|YP_741210.1| hypothetical protein Mlg_0365 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225921|gb|ABI55720.1| protein of unknown function DUF1058 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 219
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R GP + + ++ +++ G ++ + +W Q+RD G GWI L + SA
Sbjct: 32 EVAKRSGPSMQHRIL-RFVSSGTQLQQLDSSGDWTQVRDGQGREGWIETRHLMNEPSA 88
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
++ + + P +Q I+ V G L + SG+W + EGWI+ + +
Sbjct: 27 VSDQLEVAKRSGPSMQHRILRFVSSGTQLQQLDSSGDWTQVRDGQGREGWIETRHL 82
>gi|332295319|ref|YP_004437242.1| SH3 type 3 domain protein [Thermodesulfobium narugense DSM 14796]
gi|332178422|gb|AEE14111.1| SH3 type 3 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 448
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 26 LIFTLAIY-FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+I LA++ F ++ A + + + + R GPG + ++ + +
Sbjct: 10 IILFLALWVFLVSSAYAAAFTPDGN----------LVGNNIPVRDGPGTSFKII-KIINQ 58
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPWNRKTNNPIYI 136
P++ V++ +W +++ D + GW+ +L +I++ K + I
Sbjct: 59 TTPIQSVEKQGDWYKVKFQDNSEGWVIGYFVALTKQAPGSIITFDKLKDIKALGI 113
>gi|325982596|ref|YP_004294998.1| SH3 type 3 domain-containing protein [Nitrosomonas sp. AL212]
gi|325532115|gb|ADZ26836.1| SH3 type 3 domain protein [Nitrosomonas sp. AL212]
Length = 228
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV---KEYENWRQIRDFDGTIGWINK 112
R+V+ R GP + + ++ L G PVEV+ E + +++ +G GWI
Sbjct: 28 RYVS-DQLEVTFRRGPTLSHAIL-RMLKSGTPVEVLENDAETGH-TRVKIANGMEGWILS 84
Query: 113 SLLSGKRSA 121
LS + A
Sbjct: 85 RYLSAEPDA 93
>gi|88858388|ref|ZP_01133030.1| hypothetical protein PTD2_13399 [Pseudoalteromonas tunicata D2]
gi|88820005|gb|EAR29818.1| hypothetical protein PTD2_13399 [Pseudoalteromonas tunicata D2]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ L+ T + A + E+ + + I G G + +V +
Sbjct: 1 MFKQLLLTAGLLVATLSAHAETTEQPTPDNDNVQSGYIIDDLYIYMHAGAGKNFRIVGS- 59
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ G P+E++ E + + Q++D G GW+++ +S K V N K
Sbjct: 60 INAGSPLELIDEQDGYAQVKDDKGRTGWVDQRFVSKKSGLAVENQNLKDK 109
>gi|229061249|ref|ZP_04198599.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
gi|228718120|gb|EEL69760.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
Length = 335
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P+ I N R GP I +V+ L +G EV E + W + G
Sbjct: 203 PTPNNATPVYGVAVINGDNVNLRSGPSIQSSVI-RQLNRGESYEVWGEQDGWLCL----G 257
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T W+ S I T +NL P + ++ ++ G +
Sbjct: 258 TNQWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQN 312
Query: 166 EW 167
W
Sbjct: 313 GW 314
>gi|196042429|ref|ZP_03109688.1| enterotoxin [Bacillus cereus NVH0597-99]
gi|196026738|gb|EDX65386.1| enterotoxin [Bacillus cereus NVH0597-99]
Length = 464
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I+ L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIK-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|52141775|ref|YP_085057.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|51975244|gb|AAU16794.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
Length = 311
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 24/169 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + I N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAQAETIVT-----------TDVLNVRENPTVESKLVGKM 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G ++V+ W +I+ +G +++ +N+
Sbjct: 50 L-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTYYV----------TAGVLNVRAG 97
Query: 142 PDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 98 ANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|229179242|ref|ZP_04306596.1| 3D domain protein [Bacillus cereus 172560W]
gi|228604140|gb|EEK61607.1| 3D domain protein [Bacillus cereus 172560W]
Length = 456
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|167946191|ref|ZP_02533265.1| SH3, type 3 [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 232
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P ++ T LT G VE++ + E W ++ G ++ + +
Sbjct: 17 VTANLLNVRQQPDSNSAILGT-LTAGNRVELLAQLEGWLEVEFNQGN-AYVAREYVDLHP 74
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVA----KVEPGVLLTIRECSGEWCFGYNLDT 175
+ + +++ + Q+ A ++ G + I G+W T
Sbjct: 75 R---EAPQQGVVDANLLHVRSQASRQASRQASSLGQLAAGSRMVIESRLGDWFEIPFGST 131
Query: 176 EGWIKKQKI 184
G++ I
Sbjct: 132 RGYVAATYI 140
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++PD S I+ + G + + W ++ ++ +
Sbjct: 15 GRVTANLLNVRQQPDSNSAILGTLTAGNRVELLAQLEGWLEVEFNQGNAYVAREYV 70
>gi|167632482|ref|ZP_02390809.1| enterotoxin [Bacillus anthracis str. A0442]
gi|254742848|ref|ZP_05200533.1| hypothetical protein BantKB_17857 [Bacillus anthracis str. Kruger
B]
gi|167532780|gb|EDR95416.1| enterotoxin [Bacillus anthracis str. A0442]
Length = 404
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|326205001|ref|ZP_08194852.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325984867|gb|EGD45712.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 235
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I A + A S + + T+ AS N R PG V+ + +T+G
Sbjct: 7 MISGAATIVLCLGLFAFSSFADEIQTG------TVSASVLNLRSDPGTSSKVIGS-MTRG 59
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIYINL 138
+ +++ +W +++ DG GW LS I S + L
Sbjct: 60 DKLSILESSGDWLKVKTSDGETGWAYSQYIALSKDSDDITSVKQSDKATDLSEQL 114
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
S+ T + +NL P S ++ + G L+I E SG+W + GW
Sbjct: 24 SSFADEIQTGTVSASVLNLRSDPGTSSKVIGSMTRGDKLSILESSGDWLKVKTSDGETGW 83
Query: 179 IKKQKI 184
Q I
Sbjct: 84 AYSQYI 89
>gi|206971790|ref|ZP_03232739.1| enterotoxin [Bacillus cereus AH1134]
gi|206733175|gb|EDZ50348.1| enterotoxin [Bacillus cereus AH1134]
Length = 499
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 77 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|190564806|ref|ZP_03017727.1| enterotoxin [Bacillus anthracis Tsiankovskii-I]
gi|190564123|gb|EDV18087.1| enterotoxin [Bacillus anthracis Tsiankovskii-I]
Length = 416
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGEELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W ++
Sbjct: 77 SSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|254785915|ref|YP_003073344.1| SH3 domain-containing protein [Teredinibacter turnerae T7901]
gi|237686432|gb|ACR13696.1| bacterial SH3 domain protein [Teredinibacter turnerae T7901]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVEVV 91
L +L S + ++ + VT++ GPG Y V + +G +E++
Sbjct: 12 LLLGFVLYASSQAQLSAAETAGERVTLQVIDVYADVHAGPGRGYPV-FYAVEQGEAIEII 70
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ W +IR +G GW+ +S R+ + + N
Sbjct: 71 AKRPGWYEIRLQNGRTGWVTAKQIS--RTVQATGEPADLPEVSFGN 114
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+++ LS +A +Y +++ P + VE G + I W
Sbjct: 22 SQAQLSAAETA--GERVTLQVIDVYADVHAGPGRGYPVFYAVEQGEAIEIIAKRPGWYEI 79
Query: 171 YN-LDTEGWIKKQKI 184
GW+ ++I
Sbjct: 80 RLQNGRTGWVTAKQI 94
>gi|228959175|ref|ZP_04120872.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228800465|gb|EEM47385.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 477
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|229111186|ref|ZP_04240741.1| 3D domain protein [Bacillus cereus Rock1-15]
gi|228672265|gb|EEL27554.1| 3D domain protein [Bacillus cereus Rock1-15]
Length = 316
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V + G ++V+ W +I+ +G +++
Sbjct: 28 VTTDILNVRENPNVESKLVGK-VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|126729269|ref|ZP_01745083.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
gi|126710259|gb|EBA09311.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
Length = 274
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 55/206 (26%), Gaps = 60/206 (29%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L F + + + + P F+ N R GP Y VV + G V
Sbjct: 20 LIALFIAFFTASQAAALQAWVNAPEDGFL-------NLRTGPATSYEVV-REMPHGSLVT 71
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSG-------------------------------- 117
V+ E NW ++RD G G+ LS
Sbjct: 72 VL-EDGNWFRVRDAYGNTGFAAARYLSATEPRPRRTDDANIASRGDHSLYSGEIDRGAGT 130
Query: 118 -------------KRSAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+R A V +NL P ++ + G +
Sbjct: 131 YQGRDGTRYRNADRRHADVPLDRLPQLYINAPQAGALNLRDGPGTGFPVIDTMTQGSSVR 190
Query: 160 IRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + S W + G+ + +
Sbjct: 191 VLDDSQTWYLIRHEDGQTGYAHSKYL 216
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
A N R GPG + V+ +T+G V V+ + + W IR DG G+ + LS R
Sbjct: 164 AGALNLRDGPGTGFPVI-DTMTQGSSVRVLDDSQTWYLIRHEDGQTGYAHSKYLSQTR-- 220
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
P + I+ + E
Sbjct: 221 -----QPLAPRPDPQPRRQPQRHNGSIIVEAED 248
>gi|228909538|ref|ZP_04073361.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228849827|gb|EEM94658.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 316
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L A F L + + I N R P + +V
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPNVESKLVGKV 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V+ W +I+ L GK + + + + R T +N+
Sbjct: 50 L-SGNTLDVINTENGWTKIK-------------LKGKEAFVSAEFTRSTYYVTAGVLNVR 95
Query: 140 KKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 96 AGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|218231912|ref|YP_002367676.1| enterotoxin [Bacillus cereus B4264]
gi|218159869|gb|ACK59861.1| enterotoxin [Bacillus cereus B4264]
Length = 529
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 77 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|295093719|emb|CBK82810.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Coprococcus sp. ART55/1]
Length = 453
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + + N R G G VV G+ + K+ + W ++ D T G+I LL
Sbjct: 104 KCLVVTEDYVNIRSGAGTDSDVVGIIGNNGI-ATIEKKGKEWTKVTSGDCT-GYIRNDLL 161
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
A + + T N +N+ + D+ S + +V G + +W
Sbjct: 162 LFGDDAGAYAEANCPKQVTVNTETLNVRTEADVNSDCITQVGSGQSFDVISQDDKWVQIA 221
Query: 172 NLD-TEGWIKKQKIWGIYP 189
D T G++ + + Y
Sbjct: 222 LDDETNGYVSTEFVDDTYA 240
>gi|126660263|ref|ZP_01731378.1| hypothetical protein CY0110_15380 [Cyanothece sp. CCY0110]
gi|126618438|gb|EAZ89192.1| hypothetical protein CY0110_15380 [Cyanothece sp. CCY0110]
Length = 184
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 35/191 (18%)
Query: 14 LRKYMPKILQNS--LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +L + L L F +A+S + P SR N R GP
Sbjct: 2 SNAWSKLLLSSFFGLTLCLTGLFPGLAQIAISQTT-LITNDP--------NSRINLRSGP 52
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYEN--------WRQIRDFD-GTIGWINKSLLSGKRSAI 122
I + Y G V ++ ++ W +++ G IGWI + + +
Sbjct: 53 SISSASLG-YGLPGDQVTLLDFHKGTDDGPRVPWIKVKFIKSGAIGWIRGDFIKTDITIL 111
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYNLDT 175
+ + INL K P I + V G + + EC W L +
Sbjct: 112 TA-----NDPNSRINLRKGPSISTDQVGYGLVGDRVKVLECQTGPDQDRTPWIKVQFLQS 166
Query: 176 E--GWIKKQKI 184
+ GWI+ +
Sbjct: 167 QAIGWIRGDFV 177
>gi|239623829|ref|ZP_04666860.1| cell wall hydrolase SleB [Clostridiales bacterium 1_7_47_FAA]
gi|239521860|gb|EEQ61726.1| cell wall hydrolase SleB [Clostridiales bacterium 1_7_47FAA]
Length = 381
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 9/127 (7%)
Query: 62 ASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----S 116
N R P + ++ Y G ++++ + W +IR GW+N L
Sbjct: 96 TDVLNLRAEPSLEGKIIGKCYRGAGG--TILEKKDGWTKIR-SGKLEGWLNNDYLVFGQD 152
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
+ A +N+ ++P +S I+ + E W DT
Sbjct: 153 IRPLAKELGLFTARVTTQTLNVREEPTTESAIIGLAAGDDYYPVLEEKDGWAKIQLASDT 212
Query: 176 EGWIKKQ 182
G++
Sbjct: 213 SGYVSTD 219
Score = 41.5 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL +P ++ I+ K G TI E W + EGW+ +
Sbjct: 97 DVLNLRAEPSLEGKIIGKCYRGAGGTILEKKDGWTKIRSGKLEGWLNNDYL 147
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P ++ V++E + W +I+ T G+++
Sbjct: 167 VTTQTLNVREEPTTESAIIGLAAGDDY-YPVLEEKDGWAKIQLASDTSGYVSTDYTK--- 222
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
VSP + L + Q+ A+ P ++ +
Sbjct: 223 -ISVSPGKAISIEAELAALKETEKQQTKKKAEEAPKYVINV 262
>gi|32266031|ref|NP_860063.1| hypothetical protein HH0532 [Helicobacter hepaticus ATCC 51449]
gi|32262080|gb|AAP77129.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 684
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 40/159 (25%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-RDFD---GTIGWINKSLLSG--- 117
N R+ P I +++ L +G VEV+++ W +I +D G+I+ +L+
Sbjct: 524 VNVRLKPSIQDSII-AKLPQGAKVEVLEQVGKWSKIAKDSKNGVNQEGYISSYMLTEALQ 582
Query: 118 ---------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG- 155
+ S++ + + +P I + IVAK G
Sbjct: 583 DAPQENTKPIESTPKDISQKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPLGR 642
Query: 156 --VLLTIRECSGEWCFGY--------NLDTEGWIKKQKI 184
+L+ +GEW + + G+I K +
Sbjct: 643 KMQILSFEGQNGEWAKIHYIFEGKQGVREINGYIAKHLL 681
>gi|239995338|ref|ZP_04715862.1| SH3, type 3 [Alteromonas macleodii ATCC 27126]
Length = 258
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 13/142 (9%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ K L +LI F L L + + L F GPG Y
Sbjct: 58 HMIRKWLAAALIACSFQAFSLQDTADLEASSSHYIRDDLFIF---------MHTGPGRNY 108
Query: 76 TVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS-AIVSPWNRKTNN 132
++ + + G P+ V+ + + QI D +G GW+ +S S A P +
Sbjct: 109 RILGS-IEAGTPITVLARDNDAEFTQITDNEGREGWVESRFVSNTMSQAEQLPIISEKLA 167
Query: 133 PIYINLYKKPDIQSIIVAKVEP 154
L + + ++
Sbjct: 168 ESQSALQTAQSENARLRQQLND 189
>gi|218898033|ref|YP_002446444.1| enterotoxin [Bacillus cereus G9842]
gi|218544317|gb|ACK96711.1| enterotoxin [Bacillus cereus G9842]
Length = 500
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + +S I+ +++ V+ + + W +
Sbjct: 77 SSEFTKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYA 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|228999981|ref|ZP_04159553.1| hypothetical protein bmyco0003_45340 [Bacillus mycoides Rock3-17]
gi|228759923|gb|EEM08897.1| hypothetical protein bmyco0003_45340 [Bacillus mycoides Rock3-17]
Length = 298
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 24/173 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTTSAKAETVVT-----------TDVLNVRENPTTESQV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V L G ++V W +I+ DG ++N +N
Sbjct: 50 VGKLLN-GHKLDVTNTENGWSKIKL-DGKDAFVNAEFTKSIYYV----------TANVLN 97
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + + S ++ ++ ++ + EW ++ + G P
Sbjct: 98 VRAEANTNSEVLGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|325849611|ref|ZP_08170849.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480092|gb|EGC83169.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 288
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 12/125 (9%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
KA N R G V+ + +V+ +W +I +++G ++ L +
Sbjct: 36 KAKVVNVRENAGTDSNVIG-GINDHTAYQVIGSENDWLKI-NYNGKEAFVAGYLFNVTEE 93
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWI 179
A V N D+ S I + G ++ ++E + EG++
Sbjct: 94 AKVLS---------PANFRSSDDLNSEIYQVLNAGDVVEVKEIAKNGYVKVAFEGKEGYV 144
Query: 180 KKQKI 184
+
Sbjct: 145 YSNLL 149
>gi|332705528|ref|ZP_08425606.1| bacterial SH3 domain protein [Lyngbya majuscula 3L]
gi|332355888|gb|EGJ35350.1| bacterial SH3 domain protein [Lyngbya majuscula 3L]
Length = 413
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 33/191 (17%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEK--------------------KPLPRFV 58
++L + LA + AP A S F R V
Sbjct: 9 RRLLVVCISVALAFTAFPAPSYATSPAIAQFTPSSRLENISFENQVKFQLAAATDNCRKV 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPV---EVVKEYENWRQIRDFDGTIGWINKSLL 115
+ S N R GPG Y ++ ++ G V ++V + +W +I G+I++ L
Sbjct: 69 VTRGSDLNVRSGPGSNYRIIG-FVKNGSEVTLEQIVNQ--DWAKISSP--LSGYISQRYL 123
Query: 116 -SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL 173
S TN +N+ + P I+ ++ G +TI + W +
Sbjct: 124 QSCPPPPKQECRIVSTNTGRGLNVRQSPG--GKIIGDLDNGAKVTIVNTITDGWVQVVSP 181
Query: 174 DTEGWIKKQKI 184
+G++ + +
Sbjct: 182 -LKGYVSDRYL 191
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 19/129 (14%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSL 114
R V+ K + N R PG +V + G V + + W I G+++++
Sbjct: 204 RLVSTKGNPLNVRATPGGT--IVGV-VENGTKVTIKGTSTDGWVPIVSP--QKGYVSEAY 258
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
L + T I + P S + T++ +G ++
Sbjct: 259 LQPCPTVKEQCGTVTTRGSDLI-VRSTPGGPS----------IGTLK--NGTEVKIESIG 305
Query: 175 TEGWIKKQK 183
+GW+K +
Sbjct: 306 ADGWLKISE 314
>gi|296504219|ref|YP_003665919.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296325271|gb|ADH08199.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 316
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V + G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPNVESKLVGK-VFSGNTLDVINTENGWTKIKL-NGKEAFVSADFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNRNDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 41.5 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L + +E + W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNRNDVIETTNQVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|159899836|ref|YP_001546083.1| SH3 type 3 domain-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|159892875|gb|ABX05955.1| SH3 type 3 domain protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 321
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P T+ A AN R P + L G V+V+ + +W +I+ DGT
Sbjct: 241 PAATPTLAPATATVVAPTANVRPAPNTNNDPI-AQLKAGDSVQVLGQSGDWYEIQLPDGT 299
Query: 107 I-GWINKSLLS 116
GW+ S+L
Sbjct: 300 GRGWVASSVLG 310
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--TEGWIK 180
T N+ P+ + +A+++ G + + SG+W D GW+
Sbjct: 246 TLAPATATVVAPTANVRPAPNTNNDPIAQLKAGDSVQVLGQSGDWYEIQLPDGTGRGWVA 305
Query: 181 KQKI 184
+
Sbjct: 306 SSVL 309
>gi|320352259|ref|YP_004193598.1| hypothetical protein Despr_0116 [Desulfobulbus propionicus DSM
2032]
gi|320120761|gb|ADW16307.1| hypothetical protein Despr_0116 [Desulfobulbus propionicus DSM
2032]
Length = 139
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 24/122 (19%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GP V+ + G P+EV+++ + W + RD+ + + L+S +A++
Sbjct: 37 IRSGPSRQARVMLV-VPGGYPIEVLEQSDGWTRFRDWQNSTARVASPLVSDIDTAVILAS 95
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---YNLDTEGWIKKQK 183
+ + GV+ T+ W GW +
Sbjct: 96 RGQ--------IRSDA------------GVIRTVLAKKNGWGQRGLYETDSPAGWTRHAT 135
Query: 184 IW 185
++
Sbjct: 136 VF 137
>gi|240143332|ref|ZP_04741933.1| NlpC/P60 family protein [Roseburia intestinalis L1-82]
gi|257204703|gb|EEV02988.1| NlpC/P60 family protein [Roseburia intestinalis L1-82]
gi|291536805|emb|CBL09917.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis M50/1]
gi|291539108|emb|CBL12219.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis XB6B4]
Length = 398
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 63 SRANSRIGPGIMYTVVCTY--LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--SGK 118
+ N R P V+ + G +E W +I+ G++ + + +
Sbjct: 100 NYVNVRSEPNTDSEVLGKLYNNSAGTILETTD--NGWYRIK-SGNVDGYVKCEYVVPNDE 156
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDTE 176
A N +++ +P + I+ +V G L + E +W + +
Sbjct: 157 ELAKRVSTKYAKVNTTTLHVRTEPSTDASILTQVPVGDDLVVIDDESVEDWAKVTTEEGD 216
Query: 177 GWIKKQKI 184
GW+ K +
Sbjct: 217 GWVHKDYV 224
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 45 EKEIFEKKPLPRFVTIKASRAN-----SRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENW 97
E + + L + V+ K ++ N R P +++ T + G + V+ + E+W
Sbjct: 149 EYVVPNDEELAKRVSTKYAKVNTTTLHVRTEPSTDASIL-TQVPVGDDLVVIDDESVEDW 207
Query: 98 RQIRDFDGTIGWINKSLLS 116
++ +G GW++K +
Sbjct: 208 AKVTTEEGD-GWVHKDYVD 225
>gi|126732308|ref|ZP_01748108.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
gi|126707177|gb|EBA06243.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
Length = 199
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENW 97
+ A + + + T+ SR N R GP + V L G VEV+ E + W
Sbjct: 118 VAATVDSVDEAVAAAVAEYRTVTGSRVNLRAGPSTSFDAVTQLLE-GEEVEVLDETPDGW 176
Query: 98 RQIRDFDG-TIGWINKSLLSGKR 119
++R DG IGW++ S L+
Sbjct: 177 VKLRATDGNNIGWMSGSFLTASN 199
>gi|193216288|ref|YP_001997487.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193089765|gb|ACF15040.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 242
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
L++R + + L+ +L + ++ ++ ++ + + + N++ P
Sbjct: 141 LNMRGFFSPLPAKVLMISLVVITLMSSVVFVAKSVQDATESK----AVVVTGVVNAKSEP 196
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ GL V++ ++ W +I+ DG GWI + +
Sbjct: 197 RESSATLFVIHE-GLKVDIAQQQGEWVEIKLPDGNKGWIRYTDVG 240
>gi|228922428|ref|ZP_04085731.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228837227|gb|EEM82565.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 310
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPNVESKLVGKVL-SGNTLDVINTENGWTKIKL-NGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNHVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R G ++ L K +E W Q D++G +G+++ L+G
Sbjct: 87 VTAGVLNVRAGANTDSEILGK-LNKDDVIETTNHVQNEWLQF-DYNGKVGYVHVPFLTGT 144
Query: 119 RSAI 122
I
Sbjct: 145 APVI 148
>gi|229916636|ref|YP_002885282.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
gi|229468065|gb|ACQ69837.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
Length = 457
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L+ V V+KEY +W ++ F GT GW+ KS L + T +Y
Sbjct: 121 LSPDTEVLVLKEYRSWALVQ-FGGTSGWMAKSHLKSR--VKKPVIKAATVQTDVSIIYVS 177
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
P + V+ ++ G + I + W G++
Sbjct: 178 PSTSAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYM 215
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 11/164 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L+ + L + + +A SH K +K P+ + T++ + + P V T
Sbjct: 129 VLKEYRSWALVQFGGTSGWMAKSHLKSRVKK-PVIKAATVQTDVSIIYVSPSTSAKEVST 187
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
L G V ++ E E W IR G + ++S +P + +Y
Sbjct: 188 -LKFGDSVVILSEAEGWSHIR-----FGQVTGYMISKD----FTPEETEFATTHSSIVYY 237
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+S V V ++T+ + W GW+ + +
Sbjct: 238 DTSSKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYL 281
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 19/162 (11%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP----GIMYTVVCTYL 82
+F++ + +L + + KP ++KA P ++ +
Sbjct: 7 VFSMFLVMFLVLSIISPNAASASTMKP-----SLKAVTTQV-TSPIYQSKSTHSKKVATV 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG V +V E + W + + G++ + K++ + + + + +K
Sbjct: 61 KKGAKVSIVSEAKGWSYVT-YGSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHK-- 117
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + + W T GW+ K +
Sbjct: 118 ------IKTLSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHL 153
>gi|302386521|ref|YP_003822343.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
gi|302197149|gb|ADL04720.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
Length = 533
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 24/146 (16%)
Query: 57 FVTIKA----SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
FV ++A N R P VV L EVV + E W Q T G+++
Sbjct: 176 FVKLRAVVQTESMNIRKEPSTSSDVVGQAL-LNERYEVVNQTEGWVQT-----TAGYLSS 229
Query: 113 SL------LSGKRS----AIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
L+ R A+V + ++ Y+N+ +P+ ++AK+
Sbjct: 230 DYVKLEYGLNEARKLDLKAMVFNLYKNIGISDVDNYLNVRDEPNENGKVIAKMPSKAAGN 289
Query: 160 IREC-SGEWCFGYNLDTEGWIKKQKI 184
I E W + + G++K I
Sbjct: 290 ILESTDDGWYKIQSGNITGYVKSDYI 315
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 11/128 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL----S 116
+ N R PG VV +++++ E W +I G G+IN +
Sbjct: 111 SGYLNVRKAPGTEEDVVGKLQG-DSACDILEKTESGWYKIS-SGGIEGYINSEYVLTGEE 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K A+ R +N+ K+P S +V + + + W
Sbjct: 169 AKAKALDFVKLRAVVQTESMNIRKEPSTSSDVVGQALLNERYEVVNQTEGWVQTTA---- 224
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 225 GYLSSDYV 232
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 10/129 (7%)
Query: 63 SRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----S 116
+ N R P V+ G +E + W +I+ G++ + +
Sbjct: 264 NYLNVRDEPNENGKVIAKMPSKAAGNILE--STDDGWYKIQ-SGNITGYVKSDYILTGPA 320
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
K A+ N +N +P + I ++ + + W ++
Sbjct: 321 AKDEALQVAELMAIVNTDMLNARTEPSTDAKIWTQISNNERYPVLKQIDGWIEIELEENS 380
Query: 176 EGWIKKQKI 184
++ +
Sbjct: 381 SAFVSTDYV 389
>gi|167948423|ref|ZP_02535497.1| hypothetical protein Epers_18531 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 273
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS-- 116
+ SR N R+GPG + V L +G +V+ + NW + + IG+++ + L+
Sbjct: 155 VTKSRVNMRLGPGTEHPVKLV-LDRGEAFQVLGKTKNNWYLLAENGTAIGYVSGAYLALP 213
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+RS + + N+ ++ ++ I
Sbjct: 214 SERSYATNQNAGTESRQPQANIRQEQQARTPI 245
>gi|229099668|ref|ZP_04230595.1| hypothetical protein bcere0020_48860 [Bacillus cereus Rock3-29]
gi|228683738|gb|EEL37689.1| hypothetical protein bcere0020_48860 [Bacillus cereus Rock3-29]
Length = 298
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V+ W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVLNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229076453|ref|ZP_04209415.1| hypothetical protein bcere0024_48940 [Bacillus cereus Rock4-18]
gi|229105845|ref|ZP_04236472.1| hypothetical protein bcere0019_49710 [Bacillus cereus Rock3-28]
gi|228677566|gb|EEL31816.1| hypothetical protein bcere0019_49710 [Bacillus cereus Rock3-28]
gi|228706639|gb|EEL58850.1| hypothetical protein bcere0024_48940 [Bacillus cereus Rock4-18]
Length = 296
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V+ W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVLNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229118733|ref|ZP_04248084.1| hypothetical protein bcere0017_49980 [Bacillus cereus Rock1-3]
gi|228664701|gb|EEL20192.1| hypothetical protein bcere0017_49980 [Bacillus cereus Rock1-3]
Length = 296
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V+ W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVLNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229916803|ref|YP_002885449.1| SH3 type 3 domain protein [Exiguobacterium sp. AT1b]
gi|229468232|gb|ACQ70004.1| SH3 type 3 domain protein [Exiguobacterium sp. AT1b]
Length = 339
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 56/180 (31%), Gaps = 21/180 (11%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
KIL+ L+I AP E E +K AN YT
Sbjct: 2 KILKGITAGLLSIALLGAPATPFIGEAPQVEASTQ-----VKGMHANVET---EAYTTRS 53
Query: 80 TYLTK------GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + G +E +W Q+R + G GW+ R + +
Sbjct: 54 SKSKRVMTIPFGASLERTAVNSSWSQVR-YKGKTGWVAS------RDLMEVKKTDVMDTK 106
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ LY ++ IV KV +T + W GW+ ++ Y E F
Sbjct: 107 KTVTLYASRSTKAKIVTKVPAAKQVTRLAVNKSWSQVTYGSKTGWVASSQLKARYTKETF 166
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+W Q+ + GW+ S L R + R L + +
Sbjct: 139 SWSQVT-YGSKTGWVASSQL-KARYTKETFVPRIYQVKEDAPLQSTYATNGETLVSIPKE 196
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+++ E W GW+ + +
Sbjct: 197 FIVSSGERYNSWYKVTFSGKTGWVHSKYL 225
>gi|291536075|emb|CBL09187.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis M50/1]
Length = 403
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 6/124 (4%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V L E++ +W QI G++ L +AI
Sbjct: 140 INVREVPGTEAEIVGK-LPNNAGCEIIGTDGDWTQIE-SGKVKGYVKSEYLLTSEAAIAK 197
Query: 125 PWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
K T + + + + S ++ + G L + E W EG++
Sbjct: 198 AQEVKQTVATVTTTTLYVRDETNTDSHVITMMPEGEELEVIEVLDGWVKINVDSDEGYVS 257
Query: 181 KQKI 184
+
Sbjct: 258 SDYV 261
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 134 AQADGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 188
>gi|260576437|ref|ZP_05844427.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259021320|gb|EEW24626.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 353
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ + PG ++ IREC WC + EGW+ +
Sbjct: 33 TDLNVRSGSGTRFRVLDTLTPGEVVDIRECRRNGWCRITHDGPEGWVASNYL 84
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 25/86 (29%), Gaps = 17/86 (19%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R G G + V+ T P EVV W +I DG GW+ + L+
Sbjct: 36 NVRSGSGTRFRVLDTLT----PGEVVDIRECRRNGWCRIT-HDGPEGWVASNYLTTAPGV 90
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSI 147
L D
Sbjct: 91 --------PGGGPECRLRISRDADGP 108
>gi|237712834|ref|ZP_04543315.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262408810|ref|ZP_06085355.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|294648196|ref|ZP_06725736.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294810774|ref|ZP_06769422.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229447162|gb|EEO52953.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262353021|gb|EEZ02116.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|292636471|gb|EFF54949.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294442107|gb|EFG10926.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 326
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + ++ + + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILLFSCFLVIAAVSLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|298484068|ref|ZP_07002236.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
gi|298269749|gb|EFI11342.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
Length = 326
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + ++ + + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILLFSCFLVIAAVSLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|295087660|emb|CBK69183.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Bacteroides xylanisolvens XB1A]
Length = 326
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + ++ + + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILLFSCFLVIAAVSLKAQEIRPMPADSAYGVVHISVCNLREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|319782873|ref|YP_004142349.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168761|gb|ADV12299.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 133
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 24/75 (32%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++L+ + + + +N+ P V + G + + C WC
Sbjct: 8 VAATILAAVFGTSAAAFAYSAHTSTNLNVRSGPGAGYARVGTLPAGFRVNVTGCQPGWCR 67
Query: 170 GYNLDTEGWIKKQKI 184
+ GW +
Sbjct: 68 IHGGGVSGWASAGYL 82
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 35/113 (30%), Gaps = 15/113 (13%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ L+ I + A + L N R GPG Y V T
Sbjct: 1 MRFRFLLVAATILAAVFGTSAAAFAYSAHTSTNL-----------NVRSGPGAGYARVGT 49
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
L G V V W +I G GW + L +R+ IV P P
Sbjct: 50 -LPAGFRVNVTGCQPGWCRIH-GGGVSGWASAGYL--ERTQIVRPPIIIVRPP 98
>gi|163942923|ref|YP_001647807.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163865120|gb|ABY46179.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 292
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 24/169 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L A ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTASANAETVVT-----------TDVLNVRENPTTESKVVGK- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G ++V+ W QI+ DG +++ +N+ +
Sbjct: 49 LQNGHKLDVLNTENGWSQIKL-DGKDAFVSAEFTKNSYYV----------TANVLNVRAE 97
Query: 142 PDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 98 ANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|156741139|ref|YP_001431268.1| SH3 type 3 domain-containing protein [Roseiflexus castenholzii DSM
13941]
gi|156232467|gb|ABU57250.1| SH3 type 3 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 509
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 12/130 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSL------LSG 117
N R P VV L+ G V + + W +I G GW++++L L+
Sbjct: 264 NIRRAPNREADVVGR-LSLGEVVTLSERSIDGEWYRISTSAGLSGWVSRTLLIVDQDLAA 322
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCF-GYNLD 174
+ N+ P+++ +++ +V G +T+ + + W
Sbjct: 323 QLPVATPDNLPTAAVFNGGNVRTSPNLRGLVIDQVNAGESVTLLARNTDSTWVKIINERQ 382
Query: 175 TEGWIKKQKI 184
GW+ + +
Sbjct: 383 ITGWVSRTLL 392
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
I + N R P + V+ + V+++ + NW +I + G GW+N++LL+
Sbjct: 439 IVFNGGNVRAAPNLQAQVL-DQVNARETVQLLSKTPDGNWYRITNIRGVTGWVNRTLLTV 497
Query: 118 KRSA 121
Sbjct: 498 DPDV 501
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 40/185 (21%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQ 99
L+ + + LP N R P + V+ + G V ++ + W +
Sbjct: 320 LAAQLPVATPDNLPTAAVFNGG--NVRTSPNLRGLVI-DQVNAGESVTLLARNTDSTWVK 376
Query: 100 IRDFDGTIGWINKSLLSGKR-----------SAIVSPWNRKTNNPIYI------------ 136
I + GW++++LL+ + P
Sbjct: 377 IINERQITGWVSRTLLTITPNDLRSLPVSNETVPTPLPATAAALPPPPTPNATVPPMTGL 436
Query: 137 --------NLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYN-LDTEGWIKKQKIW 185
N+ P++Q+ ++ +V + + G W N GW+ + +
Sbjct: 437 TAIVFNGGNVRAAPNLQAQVLDQVNARETVQLLSKTPDGNWYRITNIRGVTGWVNRTLL- 495
Query: 186 GIYPG 190
+ P
Sbjct: 496 TVDPD 500
>gi|65321041|ref|ZP_00394000.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 310
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|332140092|ref|YP_004425830.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
gi|327550114|gb|AEA96832.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
Length = 200
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 13/141 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K L +LI F L I L + + L FV GPG Y
Sbjct: 1 MIRKWLAAALIACSFQAFSLQDIADLEASSSHYIRDDLFIFV---------HTGPGRNYR 51
Query: 77 VVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS-AIVSPWNRKTNNP 133
++ + + G P+ V+ + + QI D +G GW+ +S S A P +
Sbjct: 52 ILGS-IEAGTPITVLARDNDAEFTQITDPEGRKGWVESKFVSNTMSQAEQLPIISEKLAE 110
Query: 134 IYINLYKKPDIQSIIVAKVEP 154
+L + + ++
Sbjct: 111 SQSSLQTLQSDNAKLRQQLND 131
>gi|228916346|ref|ZP_04079915.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228928763|ref|ZP_04091797.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229092746|ref|ZP_04223887.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|229123231|ref|ZP_04252435.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228660007|gb|EEL15643.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228690618|gb|EEL44398.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|228830848|gb|EEM76451.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228843256|gb|EEM88335.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 322
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 24/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ L A F L + + I N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETIVT-----------TDVLNVRENPTVESKLV 58
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G ++V+ W +I+ +G +++ +N+
Sbjct: 59 GKML-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTYYV----------TAGVLNV 106
Query: 139 YKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ V+ T + EW G++ + G P
Sbjct: 107 RAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
>gi|282890738|ref|ZP_06299258.1| hypothetical protein pah_c026o065 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499331|gb|EFB41630.1| hypothetical protein pah_c026o065 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 412
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 60/171 (35%), Gaps = 17/171 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M KI L+F + P ++ P F + ++ R+ P +
Sbjct: 1 MSKISTTLLLFC-STLIGTIPSPLMAANPPGLSTNAFPAFTGKVIRNKVRIRLEPSMESM 59
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ + + V V E + + I + T +I ++ + +
Sbjct: 60 ILKEIVNGDM-VVVTGETDEFYAILPPEETKAYIFRTFV-----------LDDIVEGHKV 107
Query: 137 NLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT-EGWIKKQKI 184
N+ P ++S ++A++ G V ++ + +W + +I K I
Sbjct: 108 NVRLSPSLESPVIAQLNTGDRVNGSVSTSNAKWLEITPPNHVRFYIAKDYI 158
>gi|196044619|ref|ZP_03111854.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225865690|ref|YP_002751068.1| hypothetical protein BCA_3806 [Bacillus cereus 03BB102]
gi|196024654|gb|EDX63326.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225790857|gb|ACO31074.1| conserved domain protein [Bacillus cereus 03BB102]
Length = 310
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|89095069|ref|ZP_01167997.1| hypothetical protein MED92_16080 [Oceanospirillum sp. MED92]
gi|89080701|gb|EAR59945.1| hypothetical protein MED92_16080 [Oceanospirillum sp. MED92]
Length = 207
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L F L PI A + E ++ + A R PG+ + L KG V
Sbjct: 5 LFALFCLFPISASAVE-----------YLVVTADSVRVREKPGL-HGRSMLMLNKGHLVI 52
Query: 90 VVKEYENWRQI-----RDFDG-TIGWINKSLLSGKRSAI 122
V++ W +I D T GW++ S L +++ +
Sbjct: 53 KVEDKGEWTRIYFKGREDQANQTEGWMHSSFLKEEKAVV 91
>gi|283850939|ref|ZP_06368224.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
gi|283573585|gb|EFC21560.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
Length = 160
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 12/135 (8%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ L LA+ L + AL+ + +++ R P + +V
Sbjct: 1 MRSRRLAVALAVVLTLCGVGALAAKV-----------MSVAVRDGQVRETPSFLGKIVGK 49
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ G V+V E +W ++ G GW+++S LS + A+ S N
Sbjct: 50 -ASYGQTVDVSDEQGDWAKVSVSGGPSGWMHRSALSAGKLALSSGSGASGNVSGKEMALA 108
Query: 141 KPDIQSIIVAKVEPG 155
+ + A G
Sbjct: 109 GKGFSAQVEADYRRG 123
>gi|268610781|ref|ZP_06144508.1| hypothetical protein RflaF_14947 [Ruminococcus flavefaciens FD-1]
Length = 288
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V K++ N R P +++ + + K V +W I + G G++N + LS
Sbjct: 155 VATKSTDLNMRSSPSTSASIIGS-IPKDTIVGYYGSEGSW-GIVYYGGKYGYVNTAYLSS 212
Query: 118 K--RSAIV----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S V S +NL + I+ + G + + W +
Sbjct: 213 DLYPSHDVYQGLSVSYAVVKANGGLNLRNSDSTSASIITTIPNGTEVVVLSSYDGWSYVN 272
Query: 172 NLDTEGWIKKQKI 184
D G++K + +
Sbjct: 273 YGDKYGYVKSEYL 285
>gi|298207011|ref|YP_003715190.1| BatE, TRP domain containing protein [Croceibacter atlanticus
HTCC2559]
gi|83849645|gb|EAP87513.1| BatE, TRP domain containing protein [Croceibacter atlanticus
HTCC2559]
Length = 249
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + L+ L F +L I A+ + F I R P
Sbjct: 144 ILLYYFSRASLKKRLFFIGGSLAFLIAICAVVFAYQQQSVLEQKSFGIIFPEEVVVRSEP 203
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ L +G ++++++++WR+I DG GW+ K+ L
Sbjct: 204 NSRSEQLFL-LHEGTKAKILEDFDSWRKIELADGKQGWLLKTELKA 248
>gi|206970483|ref|ZP_03231436.1| conserved domain protein [Bacillus cereus AH1134]
gi|206735060|gb|EDZ52229.1| conserved domain protein [Bacillus cereus AH1134]
Length = 292
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W ++ L+GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKV-------------TLNGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 AEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|49478338|ref|YP_037781.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|196034226|ref|ZP_03101636.1| conserved domain protein [Bacillus cereus W]
gi|196038535|ref|ZP_03105844.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|218904841|ref|YP_002452675.1| hypothetical protein BCAH820_3725 [Bacillus cereus AH820]
gi|228935014|ref|ZP_04097844.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228947378|ref|ZP_04109669.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|254721140|ref|ZP_05182931.1| hypothetical protein BantA1_01625 [Bacillus anthracis str. A1055]
gi|301055205|ref|YP_003793416.1| 3D domain-containing protein [Bacillus anthracis CI]
gi|49329894|gb|AAT60540.1| conserved hypothetical protein, possible enterotoxin/cell-wall
binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|195993300|gb|EDX57258.1| conserved domain protein [Bacillus cereus W]
gi|196030943|gb|EDX69541.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|218539252|gb|ACK91650.1| conserved domain protein [Bacillus cereus AH820]
gi|228812231|gb|EEM58561.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228824584|gb|EEM70386.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|300377374|gb|ADK06278.1| 3D domain protein [Bacillus cereus biovar anthracis str. CI]
Length = 310
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|30263719|ref|NP_846096.1| hypothetical protein BA_3845 [Bacillus anthracis str. Ames]
gi|47529132|ref|YP_020481.1| hypothetical protein GBAA_3845 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186563|ref|YP_029815.1| hypothetical protein BAS3562 [Bacillus anthracis str. Sterne]
gi|165872777|ref|ZP_02217404.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167636019|ref|ZP_02394325.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167639816|ref|ZP_02398085.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170689307|ref|ZP_02880502.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170706813|ref|ZP_02897271.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177652022|ref|ZP_02934568.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190568433|ref|ZP_03021340.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227813385|ref|YP_002813394.1| hypothetical protein BAMEG_0788 [Bacillus anthracis str. CDC 684]
gi|229602117|ref|YP_002867955.1| hypothetical protein BAA_3868 [Bacillus anthracis str. A0248]
gi|254683578|ref|ZP_05147438.1| hypothetical protein BantC_06985 [Bacillus anthracis str.
CNEVA-9066]
gi|254735750|ref|ZP_05193456.1| hypothetical protein BantWNA_11386 [Bacillus anthracis str. Western
North America USA6153]
gi|254739551|ref|ZP_05197246.1| hypothetical protein BantKB_00757 [Bacillus anthracis str. Kruger
B]
gi|254751120|ref|ZP_05203159.1| hypothetical protein BantV_01572 [Bacillus anthracis str. Vollum]
gi|254759437|ref|ZP_05211462.1| hypothetical protein BantA9_14101 [Bacillus anthracis str.
Australia 94]
gi|30258363|gb|AAP27582.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47504280|gb|AAT32956.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180490|gb|AAT55866.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164711455|gb|EDR17005.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167512217|gb|EDR87594.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167528531|gb|EDR91293.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170128231|gb|EDS97100.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170666765|gb|EDT17533.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172082391|gb|EDT67456.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190560437|gb|EDV14415.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227003745|gb|ACP13488.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229266525|gb|ACQ48162.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 310
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I+ +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIK-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|121998823|ref|YP_001003610.1| hypothetical protein Hhal_2044 [Halorhodospira halophila SL1]
gi|121590228|gb|ABM62808.1| protein of unknown function DUF1058 [Halorhodospira halophila SL1]
Length = 236
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+I S +F A+ P+ + + + + ++I R GPG Y +
Sbjct: 2 RIKSASAVFLSAVLVTGLPLTSATAQTAYVGDE-----ISISF-----RTGPGSQYAIE- 50
Query: 80 TYLTKGLPVEVV------------KEYENWRQIRDFDGTIGWINKSLL 115
+L+ G P+EV+ E+W +RD G GW+ + L
Sbjct: 51 RFLSTGAPLEVLPLPEDAEEDYGEVALEDWIYVRDNQGDEGWVQERFL 98
>gi|116490652|ref|YP_810196.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
gi|116091377|gb|ABJ56531.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
Length = 315
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
LR+ + K Q LI + + ++A + + +K + +T KA + R GPG
Sbjct: 8 LRRILKK--QVPLIVSAVLIIAGLLLVASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGP 65
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
MY + T+ + ++KE W ++R D GW+ + GK + +
Sbjct: 66 MYKQLATFSNS-EKLTILKEKHGWLKVRSSIDKKTGWVASWVAEGKANNVSKVTRMTEAT 124
Query: 133 PIYINLYKKPDIQSIIV 149
+ + D S+ +
Sbjct: 125 IVLDPGHGGSDPGSLAI 141
>gi|254786476|ref|YP_003073905.1| SH3, type 3 domain-containing protein [Teredinibacter turnerae
T7901]
gi|237687009|gb|ACR14273.1| SH3, type 3 domain protein [Teredinibacter turnerae T7901]
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVV--KEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y ++ + G P+ ++ E W ++R G GWI L +A
Sbjct: 21 HVPLRSGEGNEYRIINKGIRSGTPLTILEAGSSEEWVKVRTPQGVEGWIRSQYLQENETA 80
>gi|254421523|ref|ZP_05035241.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
gi|196189012|gb|EDX83976.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
Length = 641
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 42/150 (28%), Gaps = 32/150 (21%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLL----- 115
N R G G + VV + G + VV + W QI G GWI L+
Sbjct: 490 NVRAGAGTNFAVV-DTVQVGDRIRVVNRTNDAGGFPWYQILTPSGAQGWIAGQLIQIDGD 548
Query: 116 --------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ + N+ P + PG + I+
Sbjct: 549 AAPPSTPTPQPPPSPTPTPVDRTNATIVSTEAGSKNIRSGPGTNYSVRHIAYPGDRIIIQ 608
Query: 162 ECSGE-----WCFGYNL--DTEGWIKKQKI 184
S + W EGWI Q +
Sbjct: 609 TSSTDSGGYTWYKVTFPKSGAEGWIAAQLV 638
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFD-GTIGWINK 112
V+ +A N R GPG Y+V + ++ W ++ G GWI
Sbjct: 576 VSTEAGSKNIRSGPGTNYSVRHIAYPGDRIIIQTSSTDSGGYTWYKVTFPKSGAEGWIAA 635
Query: 113 SLL 115
L+
Sbjct: 636 QLV 638
>gi|153816416|ref|ZP_01969084.1| hypothetical protein RUMTOR_02669 [Ruminococcus torques ATCC 27756]
gi|317502457|ref|ZP_07960620.1| hypothetical protein HMPREF1026_02565 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089283|ref|ZP_08338185.1| hypothetical protein HMPREF1025_01768 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846251|gb|EDK23169.1| hypothetical protein RUMTOR_02669 [Ruminococcus torques ATCC 27756]
gi|316896142|gb|EFV18250.1| hypothetical protein HMPREF1026_02565 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405835|gb|EGG85364.1| hypothetical protein HMPREF1025_01768 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 381
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 67 SRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKRSA 121
R P + L K +V++ + W +IR G++ + L + A
Sbjct: 87 IRNAP--DDSGDWVGKLYKDSAAQVLEYLDGWTKIR-SGSAEGYVPEDALFTGEEAQARA 143
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIK 180
+ T +N+ + S I+ +++ G + + E +G W D GW+
Sbjct: 144 QEYEKDTVTVTAYVLNVREGCGTDSKILTQIKKGEVYETVGEATGGWYPVKVGDKSGWVS 203
Query: 181 KQKI 184
+
Sbjct: 204 GDYV 207
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
VT+ A N R G G ++ T + KG E V E W ++ D GW++ +
Sbjct: 151 VTVTAYVLNVREGCGTDSKIL-TQIKKGEVYETVGEATGGWYPVKVGD-KSGWVSGDYV 207
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
++ + + PD V K+ + E W + EG++ + ++
Sbjct: 79 SDTKEFTYIRNAPDDSGDWVGKLYKDSAAQVLEYLDGWTKIRSGSAEGYVPEDALF 134
>gi|326693671|ref|ZP_08230676.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc argentinum KCTC
3773]
Length = 300
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 17 YMPKILQNSLI---FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K L ++LI ++ I ++ K+ P R GPG+
Sbjct: 1 MIKKWLLSNLIGVSISVFILMTTFGLVYSLTNKDKISPGP---------DNVQLRSGPGV 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGKRS 120
Y + T L +G + ++K+ W Q+R D GW+ ++ R+
Sbjct: 52 QYRSLAT-LKRGTDLIILKDDRGWYQVRRADNEKVGWVASW-VAKSRT 97
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 13/85 (15%)
Query: 109 WINKSLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
W+ +L+ S + + ++ + P + L P +Q +A ++ G
Sbjct: 5 WLLSNLIGVSISVFILMTTFGLVYSLTNKDKISPGPDNVQLRSGPGVQYRSLATLKRGTD 64
Query: 158 LTIRECSGEWCFGYNLDTE--GWIK 180
L I + W D E GW+
Sbjct: 65 LIILKDDRGWYQVRRADNEKVGWVA 89
>gi|311746984|ref|ZP_07720769.1| pipeptidyl-peptidase VI [Algoriphagus sp. PR1]
gi|126578682|gb|EAZ82846.1| pipeptidyl-peptidase VI [Algoriphagus sp. PR1]
Length = 387
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S AN R P + T G P++V+KE + W ++ DG + W++++ +
Sbjct: 99 VTISVANIRSNP-RHSAELGTQALMGTPLKVLKEDDGWFLVQTPDGYLSWVDRAGIHQMT 157
Query: 120 SAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
A + W + + +++K + +S +V+ + G +L + E E
Sbjct: 158 EAELETWYTLPKVVFTSLTGHVWKD-ESKSEMVSDLVAGDILVVGEIHKEMTHVTLPDGR 216
Query: 176 EGWIKKQKI 184
GW+ +
Sbjct: 217 SGWVDNSNL 225
>gi|238020598|ref|ZP_04601024.1| hypothetical protein GCWU000324_00484 [Kingella oralis ATCC 51147]
gi|237867578|gb|EEP68584.1| hypothetical protein GCWU000324_00484 [Kingella oralis ATCC 51147]
Length = 172
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 16/138 (11%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
AN R P ++ + +++ W +I+ G G++++S ++ I
Sbjct: 31 GSANVRAAPDTHSKILTELDYRSTQHKILGRQGKWLRIQLNGGRTGYVHQSQGYIVQNYI 90
Query: 123 VSPWNRKTNNPIYINLYKKP-DIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLD----- 174
V+ + N +P QS I+ + G I G+W + N
Sbjct: 91 VASPDGSANVRHNEMDQGQPITGQSEILTTLPNGTRAQIIPKLNRGDWLYYTNQGAYTEK 150
Query: 175 --------TEGWIKKQKI 184
G+I K ++
Sbjct: 151 NEYGNNKLISGYIHKSQL 168
>gi|149376320|ref|ZP_01894083.1| hypothetical protein MDG893_05294 [Marinobacter algicola DG893]
gi|149359334|gb|EDM47795.1| hypothetical protein MDG893_05294 [Marinobacter algicola DG893]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L + F AP+ A + +P+P+ V + R GP + Y V KG
Sbjct: 3 LALILLFLTAPLSATADWLWGGADEPMPQ-VQVAEPFVEWRTGPAVGYPV-FHTSEKGEW 60
Query: 88 VEVVKEYENWRQIRDFDGTIGWIN 111
+ + +W ++ D G GW++
Sbjct: 61 LTLRMRKTSWLKVTDRKGREGWVH 84
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQK 183
P + ++ P + + E G LT+R W EGW+
Sbjct: 28 PMPQVQVAEPFVEWRTGPAVGYPVFHTSEKGEWLTLRMRKTSWLKVTDRKGREGWVHIDD 87
Query: 184 I 184
+
Sbjct: 88 V 88
>gi|229168394|ref|ZP_04296118.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH621]
gi|228615038|gb|EEK72139.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH621]
Length = 335
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P+ I N R GP + +V+ L +G EV E W + G
Sbjct: 203 PTPNNATPVYGVAVINGDNVNLRSGPSLQSSVI-RQLNRGESYEVWGEQNGWLCL----G 257
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T W+ S I T +NL P + ++ ++ G +
Sbjct: 258 TNQWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKLD 312
Query: 166 EW 167
W
Sbjct: 313 GW 314
>gi|218231187|ref|YP_002370018.1| hypothetical protein BCB4264_A5364 [Bacillus cereus B4264]
gi|218159144|gb|ACK59136.1| conserved domain protein [Bacillus cereus B4264]
Length = 292
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W ++ L+GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKV-------------TLNGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 AEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|92114454|ref|YP_574382.1| SH3-like region [Chromohalobacter salexigens DSM 3043]
gi|91797544|gb|ABE59683.1| SH3-like region [Chromohalobacter salexigens DSM 3043]
Length = 205
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ +L + + A + + + LP +V R GP Y +V T L G
Sbjct: 7 LMLSLVLGAFAVDAHAQAEAQHWVSDQ-LPTYV---------RSGPTDGYRIVGT-LDSG 55
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
PV +++ ++ ++R DG WI L SA
Sbjct: 56 EPVTLLERQNDYSRVRSQDGDTVWIPSRYLQDTPSA 91
>gi|228969567|ref|ZP_04130370.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228790147|gb|EEM37926.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 311
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 23/148 (15%)
Query: 52 KPLPRF------VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P P F I + N R GPG Y ++ L KG +V E W + G
Sbjct: 168 TPTPSFSGETGIAYIGGNSINLRKGPGTGYGII-RQLGKGESYQVWGESNGWLNL----G 222
Query: 106 TIGWIN--KSLLSGKRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGV 156
WI S + + +P + + + K P IV V G
Sbjct: 223 GDQWIYNDSSYIRYTGEKVPAPSKPLNDGIGVVTITTDVLRVRKGPGTNYGIVKNVYQGE 282
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
W + W+ + +
Sbjct: 283 KYQTWGYRDGWYNV---GGDQWVSGEYV 307
>gi|297620741|ref|YP_003708878.1| hypothetical protein wcw_0501 [Waddlia chondrophila WSU 86-1044]
gi|297376042|gb|ADI37872.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 411
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 58/167 (34%), Gaps = 35/167 (20%)
Query: 21 ILQNSLIFTLAIYFYLAPIL--------------ALSHEKEIFEKKPLPRFVTIKASRAN 66
+L+ S +A + AP+ A H + F + + R
Sbjct: 1 MLKASSYLFIASTLFSAPVFSDGSPTDSECGFNKAAHHNSKAFTGR-------VSRDRVR 53
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R+ ++ L +G V E +++ I+ +GT ++ ++ +
Sbjct: 54 LRLSASTDSPII-KELNRGDMFLVTGEEDDFYAIKPLNGTKAYVYRTYI----------- 101
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGY 171
+N+ +P +++ ++ ++ G + I + + +W
Sbjct: 102 LDGVVEGNKVNVRIEPHLEAPVIGQLNMGERIKGKISDKNSKWLEID 148
>gi|163846329|ref|YP_001634373.1| SH3 type 3 domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|163667618|gb|ABY33984.1| SH3 type 3 domain protein [Chloroflexus aurantiacus J-10-fl]
Length = 161
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 23/101 (22%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
P+ ++ S+I LA + P + PL V++ AN R GPG + V+
Sbjct: 65 PEPVRTSVIIVLAPSPTITPTIN-----------PLRGRVSV---EANVRQGPGTSFQVI 110
Query: 79 CTYLTKGLPV--EVV--KEYENWRQIRDFDGTIGWINKSLL 115
LPV EV+ + NW +R DG GW++ ++L
Sbjct: 111 TV-----LPVNTEVILEGQRANWYLVRLSDGQSGWMSATVL 146
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 6/72 (8%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+L+ + + + + N+ + P ++ + + + W +
Sbjct: 75 VLAPSPTITPTINPLRGRVSVEANVRQGPGTSFQVITVLPVNTEVILEGQRANWYLVRLS 134
Query: 173 LDTEGWIKKQKI 184
GW+ +
Sbjct: 135 DGQSGWMSATVL 146
>gi|313884206|ref|ZP_07817972.1| N-acetylmuramoyl-L-alanine amidase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620653|gb|EFR32076.1| N-acetylmuramoyl-L-alanine amidase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 457
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 8 ILYSLDLRKYMPKILQNSLIFT--LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ ++ RKY P + L+ LA++ L+ + +
Sbjct: 7 LMRAIMTRKYFPLFITLCLMACSSLAVWGLLSNNSMIIERPGLV---------------- 50
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
R V + G + ++ + W +R D + GWI + LL + + +
Sbjct: 51 -MRRNAATNQEKVADLVE-GDTINIIGQKNGWLHVRKEDLSEGWIPQWLLENNK--LNND 106
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +L + +S + +V G L I S W G++K
Sbjct: 107 QEIAIKTLMSSDLLAEATDRSNHLIEVPLGTYLLINYESNGWVQVTYEGKVGYLKADV-- 164
Query: 186 GIYPGEVF 193
GE+
Sbjct: 165 ----GEII 168
>gi|291563880|emb|CBL42696.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 722
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 16/175 (9%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA----NSRIGPGIMYTVVCTYLTKG 85
+ + L+ S E E + + + + + N R P V+ L KG
Sbjct: 230 IVLETTLSAEEIASKEYEKTVQSIVDSYANLGIAEVSGYLNVRKTPESFGEVIGK-LPKG 288
Query: 86 LPVEVVKE-YENWRQIRDFDGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYK 140
E++ + W +I G G+++ + K+ A + R + +N+
Sbjct: 289 GACEILDTSTDGWYKIS-SGGVTGYVSSQYVYTGDEAKKLAAENVAERAVIDADKLNVRS 347
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP-GEVFK 194
+P + +V +V I+ W G+I + Y E K
Sbjct: 348 EPKADANVVEQVFKNERYDIKGQQDGWIQIS----SGYISADYVTVKYALDEAIK 398
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 48/145 (33%), Gaps = 11/145 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL- 115
V+ ++ N R P + L +++ W +IR G++ +
Sbjct: 414 VSNVSNYLNVRDNPDEKKGKIIAKLPSNAGCDILDTSTSGWYKIR-SGNITGYVKSEYIL 472
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
K A+ +N +N+ +P+ S I ++ + + W
Sbjct: 473 TGQQAKDKALQVAKLMAISNTDGVNVRTEPNTNSSIYTQISNSERFLVADQQDGWVKIEI 532
Query: 173 LDTEGWIKKQKI---WGIYPGEVFK 194
D + ++ + +G+ E K
Sbjct: 533 DDQDAYLSSDYVDVKYGL--EEAIK 555
>gi|95928219|ref|ZP_01310967.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95135490|gb|EAT17141.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 205
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ N R GP ++ V ++ G + V+ + W +R DG GW+ + + G
Sbjct: 142 VTVTVEVLNVRGGPSRLHPVN-DHVAAGDRLYVLGQAPEWYYVRLPDGGFGWVWRQFVRG 200
Query: 118 K 118
+
Sbjct: 201 E 201
>gi|303241314|ref|ZP_07327819.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
gi|302591153|gb|EFL60896.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
Length = 503
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 45 EKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
E + +K +P + V + A R GPG ++VV + + + V W ++R
Sbjct: 86 ELSVGQKLTIPIYTEVVVNVDSAFIRSGPGPNFSVVTSMVR-NAKLPVTGSSRGWYKVRL 144
Query: 103 FDGTIGWINKSLLS 116
+G WI+ +++
Sbjct: 145 HNGKDAWISGRIVT 158
>gi|260462114|ref|ZP_05810358.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259031974|gb|EEW33241.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 134
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 17/56 (30%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P V + G + + C WC + GW +
Sbjct: 27 GAHTTTNLNVRSGPGASYARVGTLPAGFRVNVTGCEPGWCRIHGGGVSGWASSGYL 82
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F LAI LA + S + + N R GPG Y V T L G
Sbjct: 5 FLLAIATVLAAVFGTSAAAFA--------YGAHTTTNLNVRSGPGASYARVGT-LPAGFR 55
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
V V W +I G GW + LS R+ +V P P
Sbjct: 56 VNVTGCEPGWCRIH-GGGVSGWASSGYLS--RAHVVRPPVIIVRPP 98
>gi|222524093|ref|YP_002568564.1| SH3 type 3 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|222447972|gb|ACM52238.1| SH3 type 3 domain protein [Chloroflexus sp. Y-400-fl]
Length = 148
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 23/101 (22%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
P+ ++ S+I LA + P + PL V++ AN R GPG + V+
Sbjct: 52 PEPVRTSVIIVLAPSPTITPTIN-----------PLRGRVSV---EANVRQGPGTSFQVI 97
Query: 79 CTYLTKGLPV--EVV--KEYENWRQIRDFDGTIGWINKSLL 115
LPV EV+ + NW +R DG GW++ ++L
Sbjct: 98 TV-----LPVNTEVILEGQRANWYLVRLSDGQSGWMSATVL 133
Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 6/72 (8%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+L+ + + + + N+ + P ++ + + + W +
Sbjct: 62 VLAPSPTITPTINPLRGRVSVEANVRQGPGTSFQVITVLPVNTEVILEGQRANWYLVRLS 121
Query: 173 LDTEGWIKKQKI 184
GW+ +
Sbjct: 122 DGQSGWMSATVL 133
>gi|229012858|ref|ZP_04170025.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228748402|gb|EEL98260.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 348
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ L +G EV E W + GT
Sbjct: 218 PNNATPVYGVAVINGDNVNLRSGPSLQSSVI-RQLNRGESYEVWGEQNGWLCL----GTN 272
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
W+ S I T +NL P + ++ ++ + W
Sbjct: 273 QWVY-----NDSSYIQYKHYVATITGDNVNLRDAPSLNGNVIRQLHHSESYRVWSKQDGW 327
>gi|86749283|ref|YP_485779.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris HaA2]
gi|86572311|gb|ABD06868.1| Peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris HaA2]
Length = 472
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 39/151 (25%), Gaps = 35/151 (23%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----------WRQIRDFDGTI 107
++ N R GPG + +V + G N W ++ + G
Sbjct: 309 SVSEGILNMRSGPGTGHPIV-VAIPAGST---GDSKGNCRAPDDGGRHPWCEVE-WRGRT 363
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYIN-----------LYKKPDIQSIIVAKVEPGV 156
GW++ + R +P K+ + P + + G
Sbjct: 364 GWVSSRSIVETRRDEAAPPQAKSRARPVFRVLGSVSQGILYVRAGPGTGHPALFSIPAGA 423
Query: 157 LL-TIRECSGE-------WCFGYNLDTEGWI 179
+ C WC GW
Sbjct: 424 SGIQLGRCRSSEDGVGAPWCEVEWGGRAGWA 454
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 8/64 (12%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGE-------WCFGYNLDTEGWIK 180
+ + +N+ P IV + G + C WC GW+
Sbjct: 308 DSVSEGILNMRSGPGTGHPIVVAIPAGSTGDSKGNCRAPDDGGRHPWCEVEWRGRTGWVS 367
Query: 181 KQKI 184
+ I
Sbjct: 368 SRSI 371
>gi|60682236|ref|YP_212380.1| putative peptidase [Bacteroides fragilis NCTC 9343]
gi|60493670|emb|CAH08459.1| putative peptidase [Bacteroides fragilis NCTC 9343]
Length = 400
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R+ + L G+PV+V+ ++ NW I+ D I W+++ + A +
Sbjct: 116 NMRVEDDFSSEMTTQALM-GMPVKVL-QHRNWYCIQTPDNYIAWVHRVGIHPVTKAGLDA 173
Query: 126 WNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
WN+ + + Y++PD +S V+ V G L G + + +I +
Sbjct: 174 WNKADKIVVTSHYGFTYQQPDAKSQSVSDVVAGNRLKYEGKQGGFYKVSYPDGRQAYISQ 233
Query: 182 Q 182
Sbjct: 234 S 234
>gi|42784405|ref|NP_981652.1| hypothetical protein BCE_5360 [Bacillus cereus ATCC 10987]
gi|42740337|gb|AAS44260.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 338
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 45 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 93
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 94 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 139
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 140 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 194
>gi|225374544|ref|ZP_03751765.1| hypothetical protein ROSEINA2194_00159 [Roseburia inulinivorans DSM
16841]
gi|257438044|ref|ZP_05613799.1| putative bacteriocin [Faecalibacterium prausnitzii A2-165]
gi|283796701|ref|ZP_06345854.1| putative bacteriocin [Clostridium sp. M62/1]
gi|225213604|gb|EEG95958.1| hypothetical protein ROSEINA2194_00159 [Roseburia inulinivorans DSM
16841]
gi|257199704|gb|EEU97988.1| putative bacteriocin [Faecalibacterium prausnitzii A2-165]
gi|291075585|gb|EFE12949.1| putative bacteriocin [Clostridium sp. M62/1]
Length = 387
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GPG+ ++ YL G VE+V++ +W ++ +F+G G+ + L+ SA S
Sbjct: 116 RSGPGMDQEIIG-YLHSGDTVEIVEKCGDWYKV-NFNGKTGYAHGKYLNVTDSAKDSSMF 173
Query: 128 RKTNNPIYINLYKK 141
+ ++++L +
Sbjct: 174 SEDALKLFLDLMQS 187
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S K++ V P ++ P + I+ + G + I E G+W
Sbjct: 99 SQKQTGTVVPGITS------LHFRSGPGMDQEIIGYLHSGDTVEIVEKCGDWYKVNFNGK 152
Query: 176 EGWIKKQKI 184
G+ + +
Sbjct: 153 TGYAHGKYL 161
>gi|325279868|ref|YP_004252410.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311677|gb|ADY32230.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 251
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ +A + + + + + + + I + P +
Sbjct: 160 TGFVVGIIAFFLTVGTMFFAMQQDKKVTDR---EYAIITTPSVTVKGAPD-NSGTSLFLI 215
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+GL V VV + +W IR DG GW+ K L
Sbjct: 216 HEGLKVRVVGQLGDWYNIRMADGNEGWVAKGDL 248
Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
V+ + + PD + + G+ + + G+W EGW+ K
Sbjct: 186 VTDREYAIITTPSVTVKGAPDNSGTSLFLIHEGLKVRVVGQLGDWYNIRMADGNEGWVAK 245
Query: 182 QKI 184
+
Sbjct: 246 GDL 248
>gi|323343585|ref|ZP_08083812.1| dipeptidyl-peptidase VI [Prevotella oralis ATCC 33269]
gi|323095404|gb|EFZ37978.1| dipeptidyl-peptidase VI [Prevotella oralis ATCC 33269]
Length = 288
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKK 141
G+P+ V ++ W Q+ D W+ + ++ WN +Y ++++
Sbjct: 21 GMPLRVNRKSGAWLQVTTPDDYESWVLAQTVRQVTRTELAAWNTGGQVMVTALYAFVHER 80
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIK 180
PD ++ V+ V G L + G + Y +G++
Sbjct: 81 PDARAQTVSDVVAGDRLKLLGKQGTFFHVAYPDGRKGYLH 120
>gi|218900363|ref|YP_002448774.1| hypothetical protein BCG9842_B5592 [Bacillus cereus G9842]
gi|218545899|gb|ACK98293.1| conserved domain protein [Bacillus cereus G9842]
Length = 292
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W ++ L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 AEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|301598777|pdb|3NPF|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
gi|301598778|pdb|3NPF|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
Length = 306
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKK 141
G PV+V+ +Y W +I+ D GW+++ ++ S +R + + Y Y+K
Sbjct: 40 GXPVKVL-QYNGWYEIQTPDDYTGWVHRXVITPXSKERYDEWNRAEKIVVTSHYGFAYEK 98
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
PD S V+ V G L G + + ++ K
Sbjct: 99 PDESSQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 140
>gi|281418636|ref|ZP_06249655.1| NLP/P60 protein [Clostridium thermocellum JW20]
gi|281407720|gb|EFB37979.1| NLP/P60 protein [Clostridium thermocellum JW20]
Length = 340
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRKTNNPIYINLYKKP 142
PVEV++E +W +++ DG GW+ + ++I+ +R +Y
Sbjct: 100 NQPVEVIEEKGSWTKVKVVDGYTGWLKSKFIDRDCTSIMEEKYTDRAVITGKTKKVYSSA 159
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+ V G L I+E + GWI +
Sbjct: 160 GGGVTLK-DVVMGTELFIKEKKDRYYEVALPGGITGWIDTK 199
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ ++++++PDI S V + + + E G W GW+K + I
Sbjct: 71 KNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVKVVDGYTGWLKSKFI 130
>gi|125974898|ref|YP_001038808.1| NLP/P60 [Clostridium thermocellum ATCC 27405]
gi|125715123|gb|ABN53615.1| NLP/P60 protein [Clostridium thermocellum ATCC 27405]
Length = 337
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRKTNNPIYINLYKKP 142
PVEV++E +W +++ DG GW+ + ++I+ +R +Y
Sbjct: 97 NQPVEVIEEKGSWTKVKVVDGYTGWLKSKFIDRDCTSIMEEKYTDRAVITGKTKKVYSSA 156
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+ V G L I+E + GWI +
Sbjct: 157 GGGVTLK-DVVMGTELFIKEKKDRYYEVALPGGITGWIDTK 196
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ ++++++PDI S V + + + E G W GW+K + I
Sbjct: 68 KNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVKVVDGYTGWLKSKFI 127
>gi|168205502|ref|ZP_02631507.1| putative enterotoxin [Clostridium perfringens E str. JGS1987]
gi|170662994|gb|EDT15677.1| putative enterotoxin [Clostridium perfringens E str. JGS1987]
Length = 955
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK--------------------- 118
T ++ G V+++ E +W ++ +++GT+GW + LS
Sbjct: 734 TIMSNGEKVDILDESGSWYKV-NYNGTMGWCSSQFLSNSTVISQSSPSKHVEENKPVYEN 792
Query: 119 RSAIVSPWNRKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ VS T YI L+ D S ++ + G + + E SG W
Sbjct: 793 KTVEVSKPVTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVD 852
Query: 172 NLDTEGW 178
+ GW
Sbjct: 853 HNGNIGW 859
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSA----IVSPWNRKTNN 132
+ KG V V++E +W ++ D +G IGW + L S + V TN
Sbjct: 833 MNKGSKVRVLEESGSWFKV-DHNGNIGWCSSEFLTNPVTSKSNTVEESKTVHLVQSNTNE 891
Query: 133 PIYINLYKKPD-----------IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + K + S + + G + I E SG W GW K
Sbjct: 892 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAK 951
Query: 182 QKI 184
+ I
Sbjct: 952 EFI 954
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 37/148 (25%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG--------------- 117
Y+ T ++ G V V++E +W ++ D++G GW + ++
Sbjct: 504 TSYSSRVTLMSNGAKVNVLEEDNSWFKV-DYNGNTGWCSSKYVTNPVSSESSTNKKVEEN 562
Query: 118 --------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGV 156
+ A+ + L+ D S +A ++ G
Sbjct: 563 KATQPNKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRLAIMDKGE 622
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI E +G+W G+ + +
Sbjct: 623 KVTILEENGDWFKVNYNGKTGFCASKYL 650
>gi|239994513|ref|ZP_04715037.1| N-acetylmuramoyl-L-alanine amidase, putative [Alteromonas macleodii
ATCC 27126]
Length = 311
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ R + A+ N R GP + Y V L KG ++++++ W ++ +GW+N
Sbjct: 240 PVKRVANVSANSLNVRKGPDVSYPTVENGLNKGEVLKILEKRGEWAKV--SYTKVGWVNT 297
Query: 113 SLLS 116
++
Sbjct: 298 KYIN 301
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTE 176
+R + +N+ K PD+ V + G +L I E GEW
Sbjct: 234 QRDLASPVKRVANVSANSLNVRKGPDVSYPTVENGLNKGEVLKILEKRGEWAKVSYTKV- 292
Query: 177 GWIKKQKI 184
GW+ + I
Sbjct: 293 GWVNTKYI 300
>gi|163744727|ref|ZP_02152087.1| hypothetical protein OIHEL45_04050 [Oceanibulbus indolifex HEL-45]
gi|161381545|gb|EDQ05954.1| hypothetical protein OIHEL45_04050 [Oceanibulbus indolifex HEL-45]
Length = 232
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTI-GWINKSLLSG 117
+ +R N R GPG + VV L KG VEVV++ W + R DG GW+ LLS
Sbjct: 173 VNGTRVNVRGGPGTDFGVVGK-LAKGDAVEVVEDNGAGWVRFRSVDGAESGWMADFLLSN 231
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLD 174
+ + + + N +N+ P +V K+ G + + E +G W ++D
Sbjct: 158 NSATYVSTTQADIRKVNGTRVNVRGGPGTDFGVVGKLAKGDAVEVVEDNGAGWVRFRSVD 217
Query: 175 T--EGWIK 180
GW+
Sbjct: 218 GAESGWMA 225
>gi|323484200|ref|ZP_08089569.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323692075|ref|ZP_08106322.1| hypothetical protein HMPREF9475_01185 [Clostridium symbiosum
WAL-14673]
gi|323402442|gb|EGA94771.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323503875|gb|EGB19690.1| hypothetical protein HMPREF9475_01185 [Clostridium symbiosum
WAL-14673]
Length = 520
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 10/134 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSL 114
++ + N R P ++ T + G +E E W +I G + G++
Sbjct: 249 ISSVDNYLNVREEPSEDGKIIGKMTSKSAGDILE-TTEDGQWYKI--HSGPVTGYVKAEY 305
Query: 115 L----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S K A+ + +N+ +P +S I ++ + + W
Sbjct: 306 ILTGASAKNEALNVAELMAIVSTDRLNVRTEPSTESQIWTQISNNERYAVLSQTDGWVEI 365
Query: 171 YNLDTEGWIKKQKI 184
T ++ +
Sbjct: 366 ELDSTSAYVSTDFV 379
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 27/180 (15%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
I L ++ F L A + +E+ + + I N R P V
Sbjct: 138 ISSGGLTGYISSEFVLTGEEAKAKAEELVALRAI-----ITVDALNIRKEPTTESDAVGQ 192
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----------RSAIVSPWNRK 129
L V + W +I G+I + K +S +++ +
Sbjct: 193 ALKNERYVIEEDTGDGWLKI-----PSGYIASEFVEQKYALNEARKLDMKSMVLNLYKNI 247
Query: 130 --TNNPIYINLYKKPDIQSIIVAKV---EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ Y+N+ ++P I+ K+ G +L E G+W ++ G++K + I
Sbjct: 248 GISSVDNYLNVREEPSEDGKIIGKMTSKSAGDILETTE-DGQWYKIHSGPVTGYVKAEYI 306
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + + ++ K++ I + + W + G+I + +
Sbjct: 102 YLNMRESASTDADVIGKLQGDSACEILDDSTEGWYQISSGGLTGYISSEFV 152
>gi|256003846|ref|ZP_05428833.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|255992184|gb|EEU02279.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|316939110|gb|ADU73144.1| NLP/P60 protein [Clostridium thermocellum DSM 1313]
Length = 340
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRKTNNPIYINLYKKP 142
PVEV++E +W +++ DG GW+ + ++I+ +R +Y
Sbjct: 100 NQPVEVIEEKGSWTKVKVVDGYTGWLKSKFIDRDCTSIMEEKYTDRAVITGKTKKVYSSA 159
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+ V G L I+E + GWI +
Sbjct: 160 GGGVTLK-DVVMGTELFIKEKKDRYYEVALPGGITGWIDTK 199
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ ++++++PDI S V + + + E G W GW+K + I
Sbjct: 71 KNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVKVVDGYTGWLKSKFI 130
>gi|326943029|gb|AEA18925.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 292
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W ++ L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKV-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ V+ T + EW ++ + G P
Sbjct: 96 AEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|284793773|pdb|2KQ8|A Chain A, Solution Nmr Structure Of A Domain From Bt9727_4915 From
Bacillus Thuringiensis, Northeast Structural Genomics
Consortium Target Bur95a
Length = 70
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I AS N R G G Y ++ L +G V+V+ E W +I +++G G+I LS
Sbjct: 7 INASALNVRSGEGTNYRIIGA-LPQGQKVQVISENSGWSKI-NYNGQTGYIGTRYLSK 62
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 17/53 (32%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ I+ + G + + + W G+I + +
Sbjct: 8 NASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKINYNGQTGYIGTRYL 60
>gi|296112111|ref|YP_003622493.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc kimchii IMSNU
11154]
gi|295833643|gb|ADG41524.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc kimchii IMSNU
11154]
Length = 300
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKSLLSGK--R 119
++ R GPG Y+ L +G + ++ + W ++R D IGW+ + K R
Sbjct: 41 NQVQLRSGPGRQYSAT-ASLKRGTNLIIMSKTRGWYKVRRTDNEQIGWVAGWVAESKTLR 99
Query: 120 SAIVSPWNRKTNNP 133
+A +P
Sbjct: 100 TATPISEATIVLDP 113
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWIK 180
+ N+ T P + L P Q A ++ G L I + W D E GW+
Sbjct: 31 ANKNKITTYPNQVQLRSGPGRQYSATASLKRGTNLIIMSKTRGWYKVRRTDNEQIGWVA 89
>gi|331089100|ref|ZP_08338004.1| hypothetical protein HMPREF1025_01587 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406000|gb|EGG85524.1| hypothetical protein HMPREF1025_01587 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 508
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 37/133 (27%), Gaps = 14/133 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLT---KGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+T N R G G VV K +V+E W +++ GWI+
Sbjct: 372 YLITTTCDVLNIRSGAGTDNKVVGAIREVAGKKNKYTIVEEKNGWGRLK---SGAGWISL 428
Query: 113 SLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK----VEPGVLLTIRECSGE 166
S + T +N+ +V TI E
Sbjct: 429 SYTKKVAASTGTTFTPYLITTTCDVLNIRSGAGTGYSVVGAIREVAGKKNKYTIVEEKNG 488
Query: 167 WCFGYNLDTEGWI 179
W + GWI
Sbjct: 489 WGRLKSG--AGWI 499
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLT---KGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P +T N R G G Y+VV K +V+E W +++ GWI+
Sbjct: 444 PYLITTTCDVLNIRSGAGTGYSVVGAIREVAGKKNKYTIVEEKNGWGRLK---SGAGWIS 500
Query: 112 KSLLSG 117
S
Sbjct: 501 LSYTKK 506
>gi|229164180|ref|ZP_04292115.1| hypothetical protein bcere0009_49420 [Bacillus cereus R309803]
gi|228619297|gb|EEK76188.1| hypothetical protein bcere0009_49420 [Bacillus cereus R309803]
Length = 294
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSTEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229175910|ref|ZP_04303407.1| hypothetical protein bcere0006_49800 [Bacillus cereus MM3]
gi|228607504|gb|EEK64829.1| hypothetical protein bcere0006_49800 [Bacillus cereus MM3]
Length = 296
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSTEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|255693901|ref|ZP_05417576.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
gi|260620266|gb|EEX43137.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
Length = 327
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ + + + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILFFFYFLAMATLSLKAQEIRPMPADSAYGVVHISVCNMREE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR + + Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTYEKPDAT 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYIPKS 160
>gi|323139383|ref|ZP_08074434.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322395376|gb|EFX97926.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 167
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 16/125 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY----ENWRQIRDFDGTIGWINKSLL--SGK 118
A R GPGI + + + G+ V V Y W ++ + G++ L SG
Sbjct: 32 ATVRSGPGIQWPAI-AKIPAGVDVNVSGCYSGWQGGWCAVQ-WKKVKGYVQVGALAPSGA 89
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLD 174
IV+P N +NL K P +A V G + + CS WC
Sbjct: 90 NDVIVAPIVTIDN----VNLRKGPGTNWPSLAVVPSGEKVDVAYCSQGWLYGWCKISYEG 145
Query: 175 TEGWI 179
G++
Sbjct: 146 QTGFV 150
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDTEGWIKKQKI 184
+ P IQ +AK+ GV + + C G WC +G+++ +
Sbjct: 32 ATVRSGPGIQWPAIAKIPAGVDVNVSGCYSGWQGGWCAVQWKKVKGYVQVGAL 84
>gi|296505663|ref|YP_003667363.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296326715|gb|ADH09643.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 292
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ V+ T + EW ++ + G P
Sbjct: 96 AEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|168217098|ref|ZP_02642723.1| putative enterotoxin [Clostridium perfringens NCTC 8239]
gi|182380836|gb|EDT78315.1| putative enterotoxin [Clostridium perfringens NCTC 8239]
Length = 955
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------K 118
T ++ G V+++ E +W ++ +++GT+GW + LS
Sbjct: 734 TIMSNGEKVDILDESGSWYKV-NYNGTMGWCSSQFLSNPTVVSQSSQSKHVEENKPVYEN 792
Query: 119 RSAIVSPWNRKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ VS T YI L+ D S ++ + G + + E SG W
Sbjct: 793 KTVEVSKPVTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVD 852
Query: 172 NLDTEGW 178
+ GW
Sbjct: 853 HNGNIGW 859
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 37/148 (25%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW-----INKSLLSGKRS------- 120
Y+ T ++ G V V++E +W ++ D++G GW + + S +
Sbjct: 504 TSYSSRVTLMSNGAKVNVLEEDNSWFKV-DYNGNTGWCSSKYVTNPVTSQSSTNKKVEEN 562
Query: 121 -----------------------AIVSPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGV 156
A+ + L+ D S +A ++ G
Sbjct: 563 KATEPNKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRLAIMDKGE 622
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI E +G+W G+ + +
Sbjct: 623 KVTILEENGDWFKVNYNGKTGFCASKYL 650
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 21/117 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSA----IVSPWNRKTNN 132
+ KG V V++E +W ++ D +G IGW + L S + V TN
Sbjct: 833 MNKGSKVRVLEESGSWFKV-DHNGNIGWCSSEFLTNPVTSKSNTVEESKTVHLVQSNTNE 891
Query: 133 PIYINLYKKPD-----------IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + K + S + + G + I E SG W GW
Sbjct: 892 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGW 948
>gi|18310240|ref|NP_562174.1| putative enterotoxin [Clostridium perfringens str. 13]
gi|18144919|dbj|BAB80964.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 955
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------K 118
T ++ G V+++ E +W ++ +++GT+GW + LS
Sbjct: 734 TIMSNGEKVDILDESGSWYKV-NYNGTMGWCSSQFLSNPTVISQSSPSKHVEENKPVYEN 792
Query: 119 RSAIVSPWNRKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ VS T YI L+ D S ++ + G + + E SG W
Sbjct: 793 KTVEVSKPVTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVD 852
Query: 172 NLDTEGW 178
+ GW
Sbjct: 853 HNGNIGW 859
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ KG V V++E +W ++ D +G IGW + L+ ++ + + + +
Sbjct: 833 MNKGSKVRVLEESGSWFKV-DHNGNIGWCSSEFLTNPVTSQSNNVEESKTVHLVQSSTSE 891
Query: 142 PDIQSIIV--------------------AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
++S V + G + I E SG W GW K
Sbjct: 892 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAK 951
Query: 182 QKI 184
+ I
Sbjct: 952 EFI 954
>gi|168209617|ref|ZP_02635242.1| putative enterotoxin [Clostridium perfringens B str. ATCC 3626]
gi|170712249|gb|EDT24431.1| putative enterotoxin [Clostridium perfringens B str. ATCC 3626]
Length = 955
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 42/178 (23%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK-------------GLPV 88
+ K + E KP T K + N + + + TK G V
Sbjct: 683 TAPIKTVEENKPTKEAETSKPTLTNIKRASIKANGGLWLHSTKDSYASSRITIMSNGEKV 742
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------KRSAIVSPWN 127
+++ E +W ++ +++GT+GW + LS ++ VS
Sbjct: 743 DILDESGSWYKV-NYNGTMGWCSSQFLSNPTVISQRSPSKHVEENKPVYENKTVEVSKPV 801
Query: 128 RKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
T YI L+ D S ++ + G + + E SG W + GW
Sbjct: 802 TSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVQHNGNIGW 859
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSA----IVSPWNRKTNN 132
+ KG V V++E +W +++ +G IGW + L S + V TN
Sbjct: 833 MNKGSKVRVLEESGSWFKVQ-HNGNIGWCSSEFLTNPVTSKSNTVEESKTVHLVQSNTNE 891
Query: 133 PIYINLYKKPD-----------IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + K + S + + G + I E SG W GW K
Sbjct: 892 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAK 951
Query: 182 QKI 184
+ I
Sbjct: 952 EFI 954
>gi|158522027|ref|YP_001529897.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510853|gb|ABW67820.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 773
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 62/199 (31%), Gaps = 38/199 (19%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA--SRANSRIGPGIM 74
Y+ K L P I +K P I++ N R P +
Sbjct: 384 YVLKGLDAGTAVAGLRTRPAGPASVAVEAPVILQKTP----AKIRSTVDVLNIRSMPSVN 439
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNR 128
+ P+ +++ +W +I+ DGT G++ + S+ + + + +
Sbjct: 440 SQRIGKLYPNETPL-LLETMPDWLKIKKPDGTTGYVFREYAEVVSMAGAAPATMETGTMK 498
Query: 129 K------------------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +N+ PD++ V K+ + E
Sbjct: 499 TAAAAAAGAAVTVPAAVTPPSAMMIRSTADVLNIRSVPDLKGRRVGKLVLNEEAKVLESD 558
Query: 165 GEWCFGYN-LDTEGWIKKQ 182
G+W T G++ ++
Sbjct: 559 GDWLKIRKPDGTTGYVFRE 577
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 20/141 (14%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----- 115
A N R P + V + +V++ +W +IR DGT G++ +
Sbjct: 526 TADVLNIRSVPDLKGRRVGKLV-LNEEAKVLESDGDWLKIRKPDGTTGYVFREYTEVVAK 584
Query: 116 -------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ +A+ +P + +N+ PD++ V K+ + E
Sbjct: 585 AGDAPAAMKAAAAAAAGTAMTAPATMIRSTADVLNIRSVPDLKGRRVGKLFLNEEADVLE 644
Query: 163 CSGEWCFGYN-LDTEGWIKKQ 182
G+W T G++ ++
Sbjct: 645 SDGDWLKIRKPDGTTGYVFRE 665
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 35/155 (22%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSG 117
A N R P + V L +V++ +W +IR DGT G++ ++SG
Sbjct: 614 TADVLNIRSVPDLKGRRVGK-LFLNEEADVLESDGDWLKIRKPDGTTGYVFREYTEVVSG 672
Query: 118 KR-----------------------------SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+A V + + +++ +P +
Sbjct: 673 TTAAPEPSPVTVVKPQAPETLPAVTPPAPVETAAVPSVPKVRSIVESLDIRSEPYGDEQV 732
Query: 149 VAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQ 182
++ G + + + EW T G++ K+
Sbjct: 733 -GQLAQGEEVEVLDTLAEWVKIKKADGTTGYVFKE 766
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
P + E +P+ +I + R P V L +G VEV+
Sbjct: 692 TLPAVTPPAPVETAAVPSVPKVRSI-VESLDIRSEPYGDEQVG--QLAQGEEVEVLDTLA 748
Query: 96 NWRQIRDFDGTIGWINKSLLS 116
W +I+ DGT G++ K S
Sbjct: 749 EWVKIKKADGTTGYVFKEYTS 769
>gi|328953595|ref|YP_004370929.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328453919|gb|AEB09748.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 238
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 12/162 (7%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPR--FVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ I L + E E P+ R F + A + P ++V ++
Sbjct: 7 LLMLISLALGVWGCATTEPVKVETAPVERETFFYVGAIELPLKSSPEPDSSIV-ASVSLN 65
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V+ ++ +W +R DG GW + R + P + ++L +P
Sbjct: 66 DRVQQLERRGSWFLVRSEDGRQGW------ANDRDLELRPISELYVRRWGVSLRAEPQKS 119
Query: 146 SIIVAKVEPGVLLTIRECSG-EWCFGYNL--DTEGWIKKQKI 184
S + ++ +T+ E W GW++ +
Sbjct: 120 SKSLVRLRTNDQVTLLEEKPKGWVKISVPRTGKTGWLELSDL 161
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 13/84 (15%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+A V I + L P+ S IVA V + E G W +
Sbjct: 27 KVETAPVERETFFYVGAIELPLKSSPEPDSSIVASVSLNDRVQQLERRGSWFLVRSEDGR 86
Query: 176 EGWIKKQKI------------WGI 187
+GW + + WG+
Sbjct: 87 QGWANDRDLELRPISELYVRRWGV 110
>gi|257126576|ref|YP_003164690.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050515|gb|ACV39699.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 153
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + N R PG +V L G+ V+ + + NW + GT G+I+KS L+
Sbjct: 96 STNKTSVNVRETPGKDSKIV-KKLPNGVSVKFISKEGNWYLVSYEGGTAGYIHKSQLTK 153
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
++ N +N+ + P S IV K+ GV + G W Y T G+I K ++
Sbjct: 94 TRSTNKTSVNVRETPGKDSKIVKKLPNGVSVKFISKEGNWYLVSYEGGTAGYIHKSQL 151
>gi|83949820|ref|ZP_00958553.1| hypothetical protein ISM_01960 [Roseovarius nubinhibens ISM]
gi|83837719|gb|EAP77015.1| hypothetical protein ISM_01960 [Roseovarius nubinhibens ISM]
Length = 262
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASR-----------ANSRIGPGIMYTVVCTYLTKGLP 87
+ E KP FV + R N R GPG Y + L +G
Sbjct: 170 VAGAGQSASPSEAKPEENFVVLSTDRAPDMREVTGNVVNMRSGPGTKYGRL-DQLNRGAK 228
Query: 88 VEVVKEYEN-WRQIRDFD-GTIGWINKSLLSG 117
VEV+++ N W ++R + G +G++ L+S
Sbjct: 229 VEVLEDMGNGWLRLRVEETGRVGYMAARLVSD 260
>gi|228956339|ref|ZP_04118177.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228803340|gb|EEM50121.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 291
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 46/148 (31%), Gaps = 23/148 (15%)
Query: 52 KPLPRF------VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P P F I + N R GPG Y ++ L KG +V + W + G
Sbjct: 148 TPTPSFSGETGIAYIGGNSVNLRKGPGTGYGII-RQLGKGESYKVWGQSNGWLNL----G 202
Query: 106 TIGWIN--KSLL--SGKRSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGV 156
WI S + SG+ + + T + + K P IV V G
Sbjct: 203 GDQWIYNDSSYIGYSGESTPTTAQTVNDGVGVVTIKADVLRVRKGPGTNYGIVKNVYQGE 262
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
W + WI + +
Sbjct: 263 QYQAWGYRDGWYNV---GGDQWISGEYV 287
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTIKA R GPG Y +V + +G + + W + G WI+ +
Sbjct: 235 VTIKADVLRVRKGPGTNYGIV-KNVYQGEQYQAWGYRDGWYNV----GGDQWISGEYVKF 289
Query: 118 KR 119
+R
Sbjct: 290 ER 291
>gi|319427529|gb|ADV55603.1| SH3 type 3 domain protein [Shewanella putrefaciens 200]
Length = 192
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GP Y ++ + + G PV + E ++ +I D G GW+ +L+S +S V
Sbjct: 37 GPSTDYRILGS-IEAGQPVTFLNETQGDYSKIIDHKGREGWVLTNLISSNQSFREQVPVL 95
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
L+ D + V +++
Sbjct: 96 KDELAKAKAELAELFNSKDNHAGEVIELKA 125
>gi|332654221|ref|ZP_08419965.1| cell wall-associated hydrolase [Ruminococcaceae bacterium D16]
gi|332517307|gb|EGJ46912.1| cell wall-associated hydrolase [Ruminococcaceae bacterium D16]
Length = 287
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 16/127 (12%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R +V+ L G V+V+ W Q+ + G G+++ LS
Sbjct: 37 SGLNLRAQANTTSSVLSV-LPSGTQVDVISTTSDGKWHQVT-YLGVTGYVSGDYLS---- 90
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEG 177
+V+ +N+ P + G ++ + + G W N G
Sbjct: 91 -VVAEKVYGQVVADSLNIRTGPGTNYATCGSLSKGTVVEVLDTIGGLGGWYKIAN----G 145
Query: 178 WIKKQKI 184
++ +
Sbjct: 146 YVSTDYV 152
>gi|303238359|ref|ZP_07324894.1| SCP-like extracellular [Acetivibrio cellulolyticus CD2]
gi|302594063|gb|EFL63776.1| SCP-like extracellular [Acetivibrio cellulolyticus CD2]
Length = 275
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT--IKASRANSRIGP 71
+ + + ++ S+IFT+ + F + FEK F++ + A+ N R GP
Sbjct: 1 MNRKLVLLIVLSIIFTVGLGFS-GFDSRSINAAPTFEKVN---FISAVVTANLLNVRQGP 56
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ VVC L KG V V+ + +W + + +
Sbjct: 57 STNFPVVCV-LKKGQWVNVIGKLGDWYAVYEPE 88
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 22/62 (35%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ + + +N+ + P +V ++ G + + G+W Y +
Sbjct: 29 INAAPTFEKVNFISAVVTANLLNVRQGPSTNFPVVCVLKKGQWVNVIGKLGDWYAVYEPE 88
Query: 175 TE 176
+
Sbjct: 89 SR 90
>gi|229185943|ref|ZP_04313114.1| 3D domain protein [Bacillus cereus BGSC 6E1]
gi|228597495|gb|EEK55144.1| 3D domain protein [Bacillus cereus BGSC 6E1]
Length = 310
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIT-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|228940078|ref|ZP_04102652.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228819690|gb|EEM65741.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 494
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 35 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 80
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 81 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLEFEYKGKIAYA 140
Query: 180 KKQKI 184
+
Sbjct: 141 NVSFL 145
>gi|304312201|ref|YP_003811799.1| hypothetical protein HDN1F_25730 [gamma proteobacterium HdN1]
gi|301797934|emb|CBL46156.1| Hypothetical protein HDN1F_25730 [gamma proteobacterium HdN1]
Length = 307
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 17/116 (14%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEK---------------EIFEKKPLPRFVTIKASRA 65
+L+ S + + F AP A + E I P P V I+A+
Sbjct: 32 LLRTSSLLCATLLFMAAPTYADTTETLDGPASEGLTASEGLTIAHPAPHPT-VEIRATYL 90
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ GPG Y V + G +E++K +W ++ G GW + S L+ ++
Sbjct: 91 DLHTGPGRNYPVR-QSVVHGERIEILKSRTSWYLVQTERGVRGWAHASQLAQIGTS 145
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+P Y++L+ P + V G + I + W GW
Sbjct: 78 APHPTVEIRATYLDLHTGPGRNYPVRQSVVHGERIEILKSRTSWYLVQTERGVRGWAHAS 137
Query: 183 KI 184
++
Sbjct: 138 QL 139
>gi|118480278|ref|YP_897429.1| hypothetical protein BALH_4738 [Bacillus thuringiensis str. Al
Hakam]
gi|118419503|gb|ABK87922.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 315
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 22 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 70
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 71 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 116
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 117 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 171
>gi|326203081|ref|ZP_08192947.1| SH3 type 3 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986727|gb|EGD47557.1| SH3 type 3 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 566
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ E E P+ + + S N R PG Y+V+ + G +E NW ++ F+
Sbjct: 239 DSENIEITPVRSSIVVTGSIVNIRANPGTSYSVIGQ-VKSGDILEANGLSNNWYRV-LFN 296
Query: 105 GTIGWINKSLLSGK 118
G+ GWI +
Sbjct: 297 GSTGWITAQYVKET 310
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
I + +N+ P ++ +V+ G +L S W + GWI
Sbjct: 245 ITPVRSSIVVTGSIVNIRANPGTSYSVIGQVKSGDILEANGLSNNWYRVLFNGSTGWITA 304
Query: 182 QKI 184
Q +
Sbjct: 305 QYV 307
>gi|229032860|ref|ZP_04188815.1| hypothetical protein bcere0028_48900 [Bacillus cereus AH1271]
gi|228728405|gb|EEL79426.1| hypothetical protein bcere0028_48900 [Bacillus cereus AH1271]
Length = 296
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSTEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S ++ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEVLGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|313887585|ref|ZP_07821268.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846463|gb|EFR33841.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 337
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQ 99
+E+ +FVT + +AN R GPG Y++ L KG PV V + W
Sbjct: 265 QNREVSSLVGTYQFVT--SGKANVRSGPGFAYSISYV-LHKGDPVYVYDTKRSDGRTWCN 321
Query: 100 IRDFDGTIGWINKSLLSGK 118
+ GWI+ L+G+
Sbjct: 322 V-----GNGWISYRTLNGE 335
>gi|170017085|ref|YP_001728004.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc citreum KM20]
gi|169803942|gb|ACA82560.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc citreum KM20]
Length = 300
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALS---HEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K L ++LI + F L K+ +P+ R GPGI
Sbjct: 1 MIKKWLLSNLIGVIITVFVLITTFGSIYTLANKDRITTRPM---------NVQLRTGPGI 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGKRSAIVSPWNRKT 130
Y T L KG + ++++ W ++R D GW+ + K + +P + T
Sbjct: 52 QYQSAAT-LKKGTNLLIMEKVRGWYKVRRTDNEKIGWVASWVAEAKTLRVATPISEAT 108
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 17/88 (19%)
Query: 110 INKSLLSGKRSAIVSP---------------WNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
I K LLS I++ +R T P+ + L P IQ A ++
Sbjct: 2 IKKWLLSNLIGVIITVFVLITTFGSIYTLANKDRITTRPMNVQLRTGPGIQYQSAATLKK 61
Query: 155 GVLLTIRECSGEWCFGYNLDTE--GWIK 180
G L I E W D E GW+
Sbjct: 62 GTNLLIMEKVRGWYKVRRTDNEKIGWVA 89
>gi|118478939|ref|YP_896090.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis str.
Al Hakam]
gi|118418164|gb|ABK86583.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 310
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + +V L G ++V+ W +I +G +++
Sbjct: 28 VTTDVLNVRENPTVESKLVGKML-SGNKLDVINTENGWTKIT-VNGKEAFVSAEFTKSTY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGW 178
+N+ + S I+ K+ V+ T + EW G+
Sbjct: 86 YV----------TAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGY 135
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 136 VHVPFLTGTAP 146
>gi|317050392|ref|YP_004111508.1| SH3 type 3 domain-containing protein [Desulfurispirillum indicum
S5]
gi|316945476|gb|ADU64952.1| SH3 type 3 domain protein [Desulfurispirillum indicum S5]
Length = 394
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIG 108
+PR A+ N R GP +++ T L V +++ ++ W +++ + G
Sbjct: 26 MPRQAVSTANMLNLRSGPSPSHSITGT-LALHQEVTIMETLQSDAGYTWYRVQ-TENQQG 83
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-- 166
+ L +N+ P Q +V +E G L+T+
Sbjct: 84 FAFGKYLHLLPQ-EPRQPVAGKVQSYQLNVRSMPSAQGSVVRVLEQGELVTVEREIPNGL 142
Query: 167 ---WCFGY-NLDTEGWIKKQKI 184
W + G++ I
Sbjct: 143 HAPWYEIRLAQEQRGFVYSAHI 164
>gi|326940732|gb|AEA16628.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 514
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV + G ++V+ + W +I L+GK +
Sbjct: 31 DVLNVREKPTTESKVV-EKVKNGQELKVINTEDGWSKIE-------------LNGKEVFV 76
Query: 123 VSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWI 179
S + + +N+ + + S I+ +++ V+ + + W +
Sbjct: 77 SSEFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLEFEYKGKIAYA 136
Query: 180 KKQKI 184
+
Sbjct: 137 NVSFL 141
>gi|323694815|ref|ZP_08108970.1| SH3 type 3 domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323501131|gb|EGB17038.1| SH3 type 3 domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 865
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K + + L ++P L R ++ A+ N R GPG Y V
Sbjct: 4 KGYKRAAALLLGCILAVSPCLTERAGLFDMVSMASERTASVNATNLNVRSGPGTSYQAV- 62
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIG 108
L++G PV V+ E W QIR F G+ G
Sbjct: 63 AKLSQGAPVTVIGEQTGTDGKLWYQIR-FSGSGG 95
>gi|323484651|ref|ZP_08090013.1| beta-N-acetylglucosaminidase [Clostridium symbiosum WAL-14163]
gi|323402034|gb|EGA94370.1| beta-N-acetylglucosaminidase [Clostridium symbiosum WAL-14163]
Length = 865
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K + + L ++P L R ++ A+ N R GPG Y V
Sbjct: 4 KGYKRAAALLLGCILAVSPCLTERAGLFDMVSMASERTASVNATNLNVRSGPGTSYQAV- 62
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIG 108
L++G PV V+ E W QIR F G+ G
Sbjct: 63 AKLSQGAPVTVIGEQTGTDGKLWYQIR-FSGSGG 95
>gi|254488576|ref|ZP_05101781.1| SH3, type 3 [Roseobacter sp. GAI101]
gi|214045445|gb|EEB86083.1| SH3, type 3 [Roseobacter sp. GAI101]
Length = 208
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDF-DGTIGWINKS 113
R V+ +R N R GPG + +V T L +G VEV+++ N W Q+R DG +GWI
Sbjct: 147 RAVS--GNRVNVRGGPGTNFGIV-TRLDRGDSVEVIEDLGNGWVQMRAIDDGRVGWIADF 203
Query: 114 LLSGK 118
LL+
Sbjct: 204 LLASS 208
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIK 180
+ + + + +N+ P IV +++ G + + E G W GWI
Sbjct: 142 AADDIRAVSGNRVNVRGGPGTNFGIVTRLDRGDSVEVIEDLGNGWVQMRAIDDGRVGWIA 201
>gi|295694890|ref|YP_003588128.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
gi|295410492|gb|ADG04984.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
Length = 417
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
T+ + R GPG Y ++ + + G V ++++ +W +R DG G+++ + L
Sbjct: 358 ATVLGQNVHVRSGPGTNYRIIGS-VAGGETVTLIQQSGDWWLVRTPDGMKGYMSAAWL 414
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+++ P I+ V G +T+ + SG+W +G++ +
Sbjct: 365 VHVRSGPGTNYRIIGSVAGGETVTLIQQSGDWWLVRTPDGMKGYMSAAWL 414
>gi|283797822|ref|ZP_06346975.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291074509|gb|EFE11873.1| NlpC/P60 family protein [Clostridium sp. M62/1]
Length = 610
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 11/122 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL----SGKRS 120
N R V+ G E++ + E W I G G+I+ + K+
Sbjct: 195 NVRETASTDADVIGKLQDGGA-CEILDDSTEGWYHIS-SGGIEGYISSEYVLTGEEAKKK 252
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A+ R T +N+ K+P +S +V + + W N G+I
Sbjct: 253 AMEEVALRATITADSLNIRKEPSTESDVVGQALENERYLVESQEDGWIKISN----GYIS 308
Query: 181 KQ 182
Sbjct: 309 AD 310
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 23/143 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--- 114
TI A N R P VV L V + + W +I + G+I+
Sbjct: 261 ATITADSLNIRKEPSTESDVVGQALE-NERYLVESQEDGWIKISN-----GYISADYATV 314
Query: 115 ---LSGKR-----SAIVSPWN--RKTNNPIYINLYKKPDIQSIIVAKV---EPGVLLTIR 161
L+ R S +++ ++ ++ Y+N+ K+P I+ K+ G +L
Sbjct: 315 AYDLNEARKLDMKSMVLNLYDHLGISSVDSYLNIRKEPSEDGEIIGKMTSKSAGEILETT 374
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
E G+W + G++ I
Sbjct: 375 E-DGKWHKIKSGPVTGYVSADYI 396
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 8/133 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ S N R P ++ T + G +E E W +I+ G+++ +
Sbjct: 339 ISSVDSYLNIRKEPSEDGEIIGKMTSKSAGEILE-TTEDGKWHKIK-SGPVTGYVSADYI 396
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K A+ + +N+ ++P S I ++ + E W
Sbjct: 397 LTGQAAKDEALKVAELMAIVSTDRLNVREQPSQDSKIWTQISNNERYPVTEQLDGWVGIE 456
Query: 172 NLDTEGWIKKQKI 184
+ ++ +
Sbjct: 457 LDTSTAYVSTDYV 469
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + + ++ K++ G I + + W + EG+I + +
Sbjct: 193 YLNVRETASTDADVIGKLQDGGACEILDDSTEGWYHISSGGIEGYISSEYV 243
>gi|78043585|ref|YP_361282.1| 5'-nucleotidase domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995700|gb|ABB14599.1| 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein
[Carboxydothermus hydrogenoformans Z-2901]
Length = 1215
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K P P++ + RA + P V ++ G ++V + +W +++
Sbjct: 1077 KPTPNPAPAPQYAVVINLRAYVKANPSASAPTVAV-VSGGSRYQIVVKDGSWYKVK-VGS 1134
Query: 106 TIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
G+IN L++ + IV K + + K + ++A V G L +
Sbjct: 1135 IFGYINAKDVLVTTQPEKIVVYKKVKVTSKSGAYIRDKA-VDGKVIATVRYGTTLEVIGF 1193
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+G + G+I ++ +
Sbjct: 1194 AGNRYKVKYGNKTGYIWEKLV 1214
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 32/102 (31%), Gaps = 18/102 (17%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP---IYINLYK----KP 142
V K NWR I+ + + ++ + P P + INL P
Sbjct: 1054 VPKVDNNWR-----------ISTTPVEQEKDVEIKPTPNPAPAPQYAVVINLRAYVKANP 1102
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ VA V G I G W G+I + +
Sbjct: 1103 SASAPTVAVVSGGSRYQIVVKDGSWYKVKVGSIFGYINAKDV 1144
>gi|118586990|ref|ZP_01544422.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
gi|118432612|gb|EAV39346.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
Length = 315
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
LR+ + K Q LI + + ++A + + +K + +T KA + R GPG
Sbjct: 8 LRRILKK--QVPLIVSAVLIIAGLLLVASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGP 65
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
MY + T+ + ++KE W ++R D GW+ + GK +
Sbjct: 66 MYKQLATFSNS-EKLTILKEKHGWLKVRSSIDKKTGWVASWVAEGKANNFSKVTRMTEAT 124
Query: 133 PIYINLYKKPDIQSIIV 149
+ + D S+ +
Sbjct: 125 IVLDPGHGGSDPGSLAI 141
>gi|146294186|ref|YP_001184610.1| SH3 type 3 domain-containing protein [Shewanella putrefaciens
CN-32]
gi|145565876|gb|ABP76811.1| SH3, type 3 domain protein [Shewanella putrefaciens CN-32]
Length = 182
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GP Y ++ + + G PV + E ++ +I D G GW+ +L+S +S V
Sbjct: 27 GPSTDYRILGS-IEAGQPVTFLNETQGDYSKIIDHKGREGWVLTNLISSTQSFREQVPVL 85
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++ D + V +++
Sbjct: 86 KDELAKAKAELAEVFNSKDNHAGEVIELKA 115
>gi|220927803|ref|YP_002504712.1| SCP-like extracellular [Clostridium cellulolyticum H10]
gi|219998131|gb|ACL74732.1| SCP-like extracellular [Clostridium cellulolyticum H10]
Length = 261
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 5/136 (3%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT---IKASRANSRIGPGIM 74
M K + +++ + + + + + + + I A N R GP
Sbjct: 1 MKKRKKAAIVLIVLVSAFTLLPIGTLQYRVDASQSYQNLASSAGMITAQDVNLRTGPNTK 60
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + L KG + V+ + +W + D +G IG ++ L + V+ +
Sbjct: 61 FDSLYK-LKKGHKLTVMGKLGDWYAVYDSANGNIGAVSARYLKVAQPKAVAKAKKVNTVK 119
Query: 134 IYINLYKKPDIQSIIV 149
N + + + ++
Sbjct: 120 SNSNETVQKAVAAKVI 135
>gi|117919272|ref|YP_868464.1| SH3 type 3 domain-containing protein [Shewanella sp. ANA-3]
gi|117611604|gb|ABK47058.1| SH3, type 3 domain protein [Shewanella sp. ANA-3]
Length = 182
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 55 PRFVTIKASRANSRI--GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWIN 111
PR+++ I GP Y ++ + + G P+ ++ E ++ +I D G GW+
Sbjct: 13 PRYIS---DNVFLYILNGPSTDYRILGS-IEAGQPITLLGETQGDYSKIVDHKGREGWVP 68
Query: 112 KSLLSGKRS----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+++S S + D + VA+++
Sbjct: 69 TNMISSTTSFREQVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKA 115
>gi|24375266|ref|NP_719309.1| hypothetical protein SO_3772 [Shewanella oneidensis MR-1]
gi|24350068|gb|AAN56753.1|AE015811_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 182
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GPG Y ++ + + G P+ + E ++ +I D G GW+ +L+S S
Sbjct: 27 GPGTDYRILGS-IEAGQPITLQGETQGDYSKIVDHKGREGWVQTNLISSTPSFREQVSTL 85
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ Q+ VA+++
Sbjct: 86 TNELNEAKAKLAEVLNSTGNQTDEVAELKA 115
>gi|198432026|ref|XP_002125414.1| PREDICTED: similar to SH3 and PX domain-containing protein 2B
[Ciona intestinalis]
Length = 765
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 22/150 (14%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WR 98
L +S + ++ + N+R+G VEV+ ++EN W
Sbjct: 148 LDISQPILPESYVVVQDYIKTQPKELNARVG---------------EVVEVMDKHENGWW 192
Query: 99 QIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ DG GW+ L GK +V ++ +Y+ + S + G
Sbjct: 193 FVSTEDGEQGWVPGVYLGKPDGKSENLVIKQDQLGQGELYLTTTQYNGEDSEV--SFNTG 250
Query: 156 VLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
VL+ + + + W F +GW +
Sbjct: 251 VLVEVLQKNLEGWWFVSYNGKQGWAPASYL 280
>gi|332142547|ref|YP_004428285.1| N-acetylmuramoyl-L-alanine amidase [Alteromonas macleodii str.
'Deep ecotype']
gi|327552569|gb|AEA99287.1| N-acetylmuramoyl-L-alanine amidase [Alteromonas macleodii str.
'Deep ecotype']
Length = 315
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ R + A+ N R GP + + ++ L KG ++V+++ W ++ +GW+N
Sbjct: 244 PVNRVANVSANALNVRKGPNVSFPLIENGLHKGEVLKVLEKQGEWAKVSFT--KVGWVNT 301
Query: 113 SLLS 116
++
Sbjct: 302 RYIN 305
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEG 177
R + +N+ K P++ ++ + G +L + E GEW G
Sbjct: 239 RHIASPVNRVANVSANALNVRKGPNVSFPLIENGLHKGEVLKVLEKQGEWAKVSFTKV-G 297
Query: 178 WIKKQKI 184
W+ + I
Sbjct: 298 WVNTRYI 304
>gi|290890066|ref|ZP_06553149.1| hypothetical protein AWRIB429_0539 [Oenococcus oeni AWRIB429]
gi|290480257|gb|EFD88898.1| hypothetical protein AWRIB429_0539 [Oenococcus oeni AWRIB429]
Length = 309
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 YMPKILQN--SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ +IL+ LI + + ++A + + +K + +T KA + R GPG M
Sbjct: 1 MLRRILKKQVPLIVSAVLIIAGLLLVASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGPM 60
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + T+ + ++KE W ++R D GW+ + K + +
Sbjct: 61 YKQLATFSNS-EKLTILKEKHGWLKVRSSIDKKTGWVASWVAEEKANNVSKVTRMTEATI 119
Query: 134 IYINLYKKPDIQSIIV 149
+ + D S+ +
Sbjct: 120 VLDPGHGGSDPGSLAI 135
>gi|89095685|ref|ZP_01168579.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. NRRL B-14911]
gi|89089431|gb|EAR68538.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. NRRL B-14911]
Length = 338
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+T+ A N R GP Y V L +G V+ +W I+ G ++ + L G
Sbjct: 200 LTVNADSLNVRTGPNTDYPKV-DSLAQGTTVQAAYNVGDWVYIK-SGSAEGLVHGAYLDG 257
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ V+ + + D + +E V+L
Sbjct: 258 SYKPGDVNNDPIALQTIVIDPGHGGSDPGAGGFGILEKNVVLD 300
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A VS T N +N+ P+ V + G + G+W + + EG +
Sbjct: 192 ASVSFTGELTVNADSLNVRTGPNTDYPKVDSLAQGTTVQAAYNVGDWVYIKSGSAEGLVH 251
Query: 181 KQKIWGIYP 189
+ G Y
Sbjct: 252 GAYLDGSYK 260
>gi|225025088|ref|ZP_03714280.1| hypothetical protein EIKCOROL_01978 [Eikenella corrodens ATCC
23834]
gi|224942180|gb|EEG23389.1| hypothetical protein EIKCOROL_01978 [Eikenella corrodens ATCC
23834]
Length = 186
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 22/139 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---------IGWIN 111
+ + N R P ++ + ++ + +W ++R G+++
Sbjct: 49 NSEKVNIRAQPNTRAAILAVCDNQSE-AAILGKSGSWYRVRLALRPNQPAERRIINGYVH 107
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCF 169
+S +S R + NL + ++ I ++ G V + G+W +
Sbjct: 108 QSQVS-LRHVYTV-----HSADGSANLRLNANSRAEIQQRIPNGTTVAEHPAKRRGDWHY 161
Query: 170 GYNLDTE----GWIKKQKI 184
++ G++ K ++
Sbjct: 162 VSVHGSDSDNYGYVHKSQL 180
>gi|228988464|ref|ZP_04148555.1| hypothetical protein bthur0001_51190 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229158803|ref|ZP_04286861.1| hypothetical protein bcere0010_49760 [Bacillus cereus ATCC 4342]
gi|228624787|gb|EEK81556.1| hypothetical protein bcere0010_49760 [Bacillus cereus ATCC 4342]
gi|228771320|gb|EEM19795.1| hypothetical protein bthur0001_51190 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|312109457|ref|YP_003987773.1| cell wall hydrolase/autolysin [Geobacillus sp. Y4.1MC1]
gi|311214558|gb|ADP73162.1| cell wall hydrolase/autolysin [Geobacillus sp. Y4.1MC1]
Length = 509
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S S++++ +N+ + ++ ++ G ++ + E +G W
Sbjct: 253 SPVNSSVIA---TGKVTADTLNVRSSGSTSASVIGQLSYGTVVNVLEINGYWAKISYNGK 309
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 310 TGYVHKTYL 318
>gi|229141975|ref|ZP_04270500.1| hypothetical protein bcere0013_50610 [Bacillus cereus BDRD-ST26]
gi|228641264|gb|EEK97570.1| hypothetical protein bcere0013_50610 [Bacillus cereus BDRD-ST26]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|116749809|ref|YP_846496.1| hypothetical protein Sfum_2380 [Syntrophobacter fumaroxidans MPOB]
gi|116698873|gb|ABK18061.1| protein of unknown function DUF1058 [Syntrophobacter fumaroxidans
MPOB]
Length = 163
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 61/174 (35%), Gaps = 28/174 (16%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ ++ ++ + + ++A + E ++++ R P + V
Sbjct: 1 MSKSRMLPMIIVVLFVAATAGAALEV-----------MSVQVKNGQLRSSPSFLAGPV-A 48
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ PVEV+++ +W ++ G GWI++S L+ K+ ++ +
Sbjct: 49 EVAYCDPVEVLRQQGDWMEVNAPGGKKGWIHQSALTKKKMSLGAGGKNPEL--------- 99
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKIWGIYPGEVF 193
S VA G + + + W+ + ++ I P E
Sbjct: 100 --GASSDEVALAGKGFNADVESR----YRTAHRSVDFAWVDRMELMRISPEETV 147
>gi|229199355|ref|ZP_04326020.1| hypothetical protein bcere0001_48550 [Bacillus cereus m1293]
gi|228584069|gb|EEK42222.1| hypothetical protein bcere0001_48550 [Bacillus cereus m1293]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|114707831|ref|ZP_01440725.1| hypothetical protein FP2506_17779 [Fulvimarina pelagi HTCC2506]
gi|114536820|gb|EAU39950.1| hypothetical protein FP2506_17779 [Fulvimarina pelagi HTCC2506]
Length = 222
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQK 183
++ +N+ P I+ + G T+ C+ G WC T+GW Q
Sbjct: 25 AQTAVSSTTDLNVRAGPGPNYEIIGVLPQGSAGTLAGCTEGGSWCQVTVDGTQGWASAQY 84
Query: 184 I 184
+
Sbjct: 85 L 85
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+ N R GPG Y ++ + E +W Q+ DGT GW + L+
Sbjct: 29 VSSTTD-LNVRAGPGPNYEIIGVLPQGSAGTLAGCTEGGSWCQVT-VDGTQGWASAQYLT 86
Query: 117 ---GKRSAIVSPWNRKTNNPIYINLYKK 141
+ +V + I Y+
Sbjct: 87 TDVDGETVVVVQRRQAAPEAIPTVTYED 114
>gi|124266412|ref|YP_001020416.1| hypothetical protein Mpe_A1219 [Methylibium petroleiphilum PM1]
gi|124259187|gb|ABM94181.1| hypothetical protein Mpe_A1219 [Methylibium petroleiphilum PM1]
Length = 268
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I GPG Y V + + + + +W ++R G GW+++ L
Sbjct: 50 VQIADPYIELHTGPGRGYPVHFVAARQEW-IAITLRHTDWYKVRTAGGKEGWVHRKQLET 108
Query: 118 KRS 120
+
Sbjct: 109 TLT 111
>gi|323487031|ref|ZP_08092343.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323692073|ref|ZP_08106320.1| hypothetical protein HMPREF9475_01183 [Clostridium symbiosum
WAL-14673]
gi|323399679|gb|EGA92065.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323503873|gb|EGB19688.1| hypothetical protein HMPREF9475_01183 [Clostridium symbiosum
WAL-14673]
Length = 573
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 11/128 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL----S 116
+ N R V+ L G E++ + E W QI G G+I+ + +
Sbjct: 122 SGYLNMRESASKDAKVIGKLLG-GSACEILDDSTEGWYQIS-SGGLNGYISSEFVLTGEA 179
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K A +N+ +P IV ++ +I W +
Sbjct: 180 AKEEAFEQVKEMAVITADKLNVRSEPTPDGQIVEQILKNERYSILGQQDGWIQIS----D 235
Query: 177 GWIKKQKI 184
G+I +
Sbjct: 236 GYISSDYV 243
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 9/144 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ + N R P ++ T + G +E E W +I+ G++ +
Sbjct: 270 ISNVNNYLNIREEPKEDGKIIGKMTSKSAGEILEKT-EDGEWYKIK-SGPVTGYVKSEFI 327
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K+ A+ + +N +P +S I ++ + + W
Sbjct: 328 LTGDAAKQEALNVAELMAIVSTDRLNARTEPSTESPIWTQISNSERYAVLKQMDGWVEIE 387
Query: 172 NLDTEGWIKKQKIWGIYP-GEVFK 194
T ++ + Y E K
Sbjct: 388 LDSTSAYVATDFVDVRYALNEAIK 411
>gi|284793776|pdb|2KRS|A Chain A, Solution Nmr Structure Of Sh3 Domain From Cpf_0587
(Fragment 415-479) From Clostridium Perfringens.
Northeast Structural Genomics Consortium (Nesg) Target
Cpr74a
Length = 74
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K + A N R GPG Y V+ T L VE++KE + W +IR F+G +G+ +KS ++
Sbjct: 5 VKVNSALNMRSGPGSNYGVIGT-LRNNDKVEIIKEVDGWYEIR-FNGKVGYASKSYIT 60
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 15/50 (30%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P ++ + + I + W G+ K I
Sbjct: 10 ALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYEIRFNGKVGYASKSYI 59
>gi|220929543|ref|YP_002506452.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219999871|gb|ACL76472.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 235
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I A + A S + T+ AS N R PG V+ + +T+G
Sbjct: 7 MISGAATIVLCLGLFAFSSFADEIHTG------TVSASVLNLRNNPGTSSKVIGS-MTRG 59
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ +++ +W +++ +G GW ++
Sbjct: 60 DKLSILESSGDWLKVKTSEGDTGWAFSRYIA 90
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
S+ + T + +NL P S ++ + G L+I E SG+W + GW
Sbjct: 24 SSFADEIHTGTVSASVLNLRNNPGTSSKVIGSMTRGDKLSILESSGDWLKVKTSEGDTGW 83
Query: 179 IKKQKI 184
+ I
Sbjct: 84 AFSRYI 89
>gi|295401199|ref|ZP_06811172.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976792|gb|EFG52397.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 504
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 22/61 (36%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
S +N+ + ++ ++ G ++ + E +G W G++ K
Sbjct: 253 SVIATGKVTADTLNVRSSGSASASVIGQLSYGTVVNVLEINGYWAKISYNGKTGYVHKTY 312
Query: 184 I 184
+
Sbjct: 313 L 313
>gi|167590104|ref|ZP_02382492.1| hypothetical protein BuboB_32510 [Burkholderia ubonensis Bu]
Length = 167
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ NL P +VA++ G L+++ C + WC GWI
Sbjct: 23 ADAQTAAYTNAPANLRAGPAQDYPLVAQLPEGTLVSVIGCISDYTWCDVAVPGLRGWIYA 82
Query: 182 QKI 184
+
Sbjct: 83 GLL 85
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++N+++ L I + L + + + P AN R GP Y +V
Sbjct: 1 MRNTIVRCLCIVLFGLLGLPGAADAQTAAYTNAP---------ANLRAGPAQDYPLV-AQ 50
Query: 82 LTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS 116
L +G V V+ + W + G GWI LL
Sbjct: 51 LPEGTLVSVIGCISDYTWCDVAVP-GLRGWIYAGLLD 86
>gi|319953009|ref|YP_004164276.1| nlp/p60 protein [Cellulophaga algicola DSM 14237]
gi|319421669|gb|ADV48778.1| NLP/P60 protein [Cellulophaga algicola DSM 14237]
Length = 385
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 9/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S AN R P + T T G PV+++K+ +W I+ D + W++ +
Sbjct: 91 VTISVANLRSNP-KHSAELGTQATLGTPVKIIKKEGSWSLIQTPDQYLSWVDDGGIVAMN 149
Query: 120 SAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGY 171
+A W + I N Y PD S +V+ + G +L + + + Y
Sbjct: 150 AADYQHWKDAQKMIYTKISGNTYTMPDETSQVVSDIVAGGILELLVTDEDEESDFFMVKY 209
Query: 172 NLDTEGWIKKQK 183
E ++ K +
Sbjct: 210 PDGREAYVAKTE 221
>gi|225850520|ref|YP_002730754.1| peptidoglycan-binding domain 1 protein [Persephonella marina EX-H1]
gi|225645413|gb|ACO03599.1| peptidoglycan-binding domain 1 protein [Persephonella marina EX-H1]
Length = 391
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
++ + +N+ +KP +S IV ++ G + + GEW D GW+K++
Sbjct: 327 INDSKQMKVKAYMLNMREKPTKESEIVYLLKEGDTVEVVGRDGEWVKVKKDDIIGWVKEK 386
Query: 183 KI 184
+
Sbjct: 387 YL 388
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ +KA N R P +V L +G VEVV W +++ D IGW+ + LS
Sbjct: 333 MKVKAYMLNMREKPTKESEIVYL-LKEGDTVEVVGRDGEWVKVK-KDDIIGWVKEKYLS 389
>gi|83645377|ref|YP_433812.1| hypothetical protein HCH_02595 [Hahella chejuensis KCTC 2396]
gi|83633420|gb|ABC29387.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
Length = 248
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
R GPG Y V + +G +E++K W ++R+ G GW +++
Sbjct: 40 RTGPGRGYPVFFV-VEQGEQIEILKRKTEWFKVRNAKGQEGWASRAQ 85
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+ P + VE G + I + EW EGW + ++
Sbjct: 28 QTVDVAEPYLEFRTGPGRGYPVFFVVEQGEQIEILKRKTEWFKVRNAKGQEGWASRAQM 86
>gi|218244966|ref|YP_002370337.1| SH3 type 3 domain-containing protein [Cyanothece sp. PCC 8801]
gi|257057991|ref|YP_003135879.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8802]
gi|218165444|gb|ACK64181.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8801]
gi|256588157|gb|ACU99043.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8802]
Length = 197
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 33/202 (16%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+F+H + + L ++LI I + + + +
Sbjct: 4 LFSHNN--MKRTITSRLTKIALSSTLIVAGFIITIDSSLAQTVTYEATLRSQD------- 54
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--------WRQIRDFD-GTIGWIN 111
+R N R P + + Y G V ++ W +++ G IGWI
Sbjct: 55 AKARINLRAEPSLTAKQIG-YGLPGDKVTILDLLRGTNNQTRFPWIKVKFVKSGAIGWIR 113
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----- 166
++ S + S T+ INL KP S + G + + C
Sbjct: 114 GDFVNTPLSILTS-----TDPKSRINLRAKPSSSSQQLGYGLSGDRVMVLGCETGSDQDR 168
Query: 167 --WCFGYN--LDTEGWIKKQKI 184
W GWI+ +
Sbjct: 169 TPWINVKFVKSGATGWIRGDFV 190
>gi|313498431|gb|ADR59797.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 216
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
P L I +A L ++A H +E R+V+ + R GP + +V
Sbjct: 8 PSALPALRIGLIA---ALVSLVAPVHAEEPASDA---RWVS-DSLSTYVRSGPTDGHRIV 60
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
T L G + ++ N+ Q+R +G + WI + L
Sbjct: 61 GT-LKSGQKLTLLGSQGNYSQVRGQNGDVVWILSNDL 96
>gi|288870484|ref|ZP_06114247.2| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
gi|288867028|gb|EFC99326.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
Length = 688
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R+Y +++ ++ + L ++ E + + R T+ AS N R GPG
Sbjct: 1 MRRYKKARKMAAILASVLVIDSLVGYVSPYIESMAY----MERSATVNASSLNVRSGPGT 56
Query: 74 MYTVVCTYLTKGLPVEVVKEYEN-----WRQIR--DFDGTI--GWINKSLL 115
Y++V T LT G V V+ E W QIR GT G+++KS L
Sbjct: 57 TYSIV-TKLTSGAAVTVIDEKTASDGALWYQIRVKGSGGTETTGYVSKSYL 106
>gi|158336884|ref|YP_001518059.1| serine/threonine protein kinase [Acaryochloris marina MBIC11017]
gi|158307125|gb|ABW28742.1| serine/threonine protein kinase, putative [Acaryochloris marina
MBIC11017]
Length = 617
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 40/145 (27%), Gaps = 27/145 (18%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGT-IGWINKSLLSGKR 119
N R GPG Y G + ++ + W + GWI L+ +
Sbjct: 471 NIRSGPGTNYA-QTHIAYPGDRITIITSDHDQGGFLWHNVYFPKSQAQGWIAAQLVKADQ 529
Query: 120 SAIVSPWNRK-------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+A +P +P N+ P + PG + I +
Sbjct: 530 AAKPAPDPTPTPKPTPANTNATLVGSPESKNIRTGPGTKFPTKHMAYPGDRVRIVGQRKD 589
Query: 167 -----WCFGYNL--DTEGWIKKQKI 184
W GWI Q I
Sbjct: 590 VGGYLWYEVLFPQSGVRGWIAAQLI 614
>gi|220935124|ref|YP_002514023.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Thioalkalivibrio sp. HL-EbGR7]
gi|219996434|gb|ACL73036.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Thioalkalivibrio sp. HL-EbGR7]
Length = 275
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVV-CTYLTKGLPVEVVKEYENWRQI---RDFDG- 105
P+ R + N R GPG+ + ++ L +G+ +EV+ + +WR++ +G
Sbjct: 203 SLPVMR----TTTGLNIRSGPGVRHPLLPSGPLPQGVKLEVIDQDGDWRRVSVLEAVNGL 258
Query: 106 --TIGWINKSLL 115
GW++ L
Sbjct: 259 SDLEGWVHGRYL 270
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 131 NNPIYINLYKKPDIQSIIV--AKVEPGVLLTIRECSGEWCFGYN-------LDTEGWIKK 181
+N+ P ++ ++ + GV L + + G+W D EGW+
Sbjct: 208 RTTTGLNIRSGPGVRHPLLPSGPLPQGVKLEVIDQDGDWRRVSVLEAVNGLSDLEGWVHG 267
Query: 182 QKI 184
+ +
Sbjct: 268 RYL 270
>gi|146282297|ref|YP_001172450.1| hypothetical protein PST_1934 [Pseudomonas stutzeri A1501]
gi|145570502|gb|ABP79608.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 243
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 11/117 (9%)
Query: 2 FTHAEKILY-SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
F + E + SL L + + I LA + E R+V+
Sbjct: 15 FQYRESFMSISLHLSALLSRFTSRHFIGAGLFGALLATTPIHAQENNDSNA----RWVS- 69
Query: 61 KASRAN--SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GP Y +V T LT G VE++ ++ Q+R G+ WI L
Sbjct: 70 --DSLNTFVRSGPTDGYRIVGT-LTSGQKVELISTQGDYSQVRSESGSTVWIPSREL 123
>gi|88802344|ref|ZP_01117871.1| putative peptidase [Polaribacter irgensii 23-P]
gi|88781202|gb|EAR12380.1| putative peptidase [Polaribacter irgensii 23-P]
Length = 395
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+F K S N R P + T G+ ++++ + ++ +++ D I W++K +
Sbjct: 101 KFAVAKNSVINIRSLP-KHSAELGTQALLGMSLKILDKKGDFYRVQTPDSYISWVDKGGI 159
Query: 116 SGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ WN I +Y +S IV+ + G LL + +
Sbjct: 160 EKMDTKKFDLWNTSEKIIFTEITGFIYTTASAESEIVSDITLGGLLQYVNENEAFYEVKY 219
Query: 173 -LDTEGWIKKQK 183
+ G++KK++
Sbjct: 220 PDNRTGFVKKEE 231
>gi|317473242|ref|ZP_07932539.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899337|gb|EFV21354.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 421
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
SA + +N+ KK I S +V K + G + T+ + EW + G++
Sbjct: 113 SASFYKGKAAPDVRSVLNIRKKKSISSPVVGKFKKGNIGTVLKKGKEWSRIRSGKVTGYV 172
Query: 180 KKQ-KIWG 186
K + IWG
Sbjct: 173 KNEYLIWG 180
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 7/127 (5%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---SGKR 119
S N R I VV + KG V+K+ + W +IR G++ L S
Sbjct: 127 SVLNIRKKKSISSPVVGKF-KKGNIGTVLKKGKEWSRIR-SGKVTGYVKNEYLIWGSDIH 184
Query: 120 SAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + +K ++ ++ V + S EW +G
Sbjct: 185 SYAKKHNFPKQAVVKVDTLKVRQKQSTKAKVLTLVSRDDSYKVLGESAEWVNVKADGDKG 244
Query: 178 WIKKQKI 184
++ K +
Sbjct: 245 YLAKDYV 251
>gi|302388033|ref|YP_003823855.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302198661|gb|ADL06232.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 387
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GPG+ ++ YL G VE+V++ +W ++ +F+G G+ + L+ S S
Sbjct: 116 RSGPGMDQEIIG-YLHSGDTVEIVEKCGDWYKV-NFNGKTGYAHGKYLNVTDSTKDSSMF 173
Query: 128 RKTNNPIYINLYKK 141
+ ++++L +
Sbjct: 174 SEDALKLFLDLMQS 187
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 16/46 (34%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + I+ + G + I E G+W G+ + +
Sbjct: 116 RSGPGMDQEIIGYLHSGDTVEIVEKCGDWYKVNFNGKTGYAHGKYL 161
>gi|110799542|ref|YP_695910.1| putative enterotoxin [Clostridium perfringens ATCC 13124]
gi|110674189|gb|ABG83176.1| putative enterotoxin, EntA [Clostridium perfringens ATCC 13124]
Length = 947
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 42/178 (23%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK-------------GLPV 88
S K + E KP T K + N + + + TK G V
Sbjct: 675 TSPSKAVEENKPKKEAETSKPTLTNIKRASVKANGGLWLHSTKDSYAYSRITIMSNGEKV 734
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------KRSAIVSPWN 127
+++ E +W ++ +++GT+GW + LS ++ VS
Sbjct: 735 DILDESGSWYKV-NYNGTMGWCSNQFLSNPTVISQSSQSKHVEENKPVYENKTVEVSKPV 793
Query: 128 RKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
T YI L+ D S ++ + G + + E SG W + GW
Sbjct: 794 TSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKIDHNGNIGW 851
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSA----IVSPWNRKTNN 132
+ KG V V++E +W +I D +G IGW + L S + V TN
Sbjct: 825 MNKGSKVRVLEESGSWFKI-DHNGNIGWCSSEFLTNPVTSQSNTVEESKTVHLVQSNTNE 883
Query: 133 PIYINLYKKPD-----------IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + K + S + + G + I E SG W GW K
Sbjct: 884 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAK 943
Query: 182 QKI 184
+ I
Sbjct: 944 EFI 946
>gi|110801837|ref|YP_698588.1| putative enterotoxin [Clostridium perfringens SM101]
gi|110682338|gb|ABG85708.1| putative enterotoxin EntA [Clostridium perfringens SM101]
Length = 956
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 21/117 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTNNPIYI 136
+ KG V V++E +W ++ D +G IGW + L S + S +
Sbjct: 834 MNKGSKVRVLEESGSWFKV-DHNGNIGWCSSEFLTNPVTSKSNTVEESKPVHLVQSNTNE 892
Query: 137 NLYKKPDIQS---------------IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +++ + + G + I E SG+W GW
Sbjct: 893 TSLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGDWVKVRYNGNTGW 949
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 29/127 (22%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------K 118
T ++ G V+++ E +W +I +++GT+GW LS
Sbjct: 735 TIMSNGEKVDILDESGSWYKI-NYNGTMGWCPSQFLSNPTVISQSSQSKAVEENKPVYEN 793
Query: 119 RSAIVSPWNRKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ VS T YI L+ + S ++ + G + + E SG W
Sbjct: 794 KTVEVSKPVNSTVKTAYIKANGGLWLHSSKNSYASSRISIMNKGSKVRVLEESGSWFKVD 853
Query: 172 NLDTEGW 178
+ GW
Sbjct: 854 HNGNIGW 860
>gi|114561753|ref|YP_749266.1| SH3 type 3 domain-containing protein [Shewanella frigidimarina
NCIMB 400]
gi|114333046|gb|ABI70428.1| SH3, type 3 domain protein [Shewanella frigidimarina NCIMB 400]
Length = 193
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA--NSRIGPGIMYTVVCTYLTKGL 86
L + L +LA S +F + RF++ GPG + ++ + + G
Sbjct: 1 MLRVLSILIFLLAPS---GVFAAQAPTRFIS---DDVFTYIHGGPGTEFRIIGS-VEAGQ 53
Query: 87 PVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSA 121
PV ++ ++ QI D G GW+ SL+S + S
Sbjct: 54 PVTLLDNTEGDFTQIIDHKGREGWVLTSLVSDQPSF 89
>gi|120597676|ref|YP_962250.1| SH3 type 3 domain-containing protein [Shewanella sp. W3-18-1]
gi|120557769|gb|ABM23696.1| SH3, type 3 domain protein [Shewanella sp. W3-18-1]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GP Y ++ + + G PV + E ++ +I D G GW+ +L+S +S V
Sbjct: 27 GPSTDYRILGS-IEAGQPVTFLNETQGDYSKIIDHKGREGWVLTNLISSNQSFREQVPVL 85
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++ D + V +++
Sbjct: 86 KDELAKAKAELAEVFNSKDNHAGEVIELKA 115
>gi|226358110|ref|YP_002787849.1| kinase [Deinococcus deserti VCD115]
gi|226319753|gb|ACO47747.1| putative kinase [Deinococcus deserti VCD115]
Length = 871
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 31 AIYFYLAPILALSHEKE-----IFEKKPLPRFVTIKASRA-----NSRIGPGIMYTVVCT 80
A+ AP A++ ++ P P V ++ N R P TV+ T
Sbjct: 342 AVMGATAPEPAMAAPEQDEAAVTPAATPEPEPVVLRTDIVTAANLNVRDQPNAGSTVMAT 401
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----SLLSGKRSA 121
+ G +++++E W ++R G GW+N LL + +A
Sbjct: 402 VVR-GSALDILEEQTPWLRVRTSSGQDGWVNGEHTLPLLGEEATA 445
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+N+ +P+ S ++A V G L I E W + +GW+
Sbjct: 378 TDIVTAANLNVRDQPNAGSTVMATVVRGSALDILEEQTPWLRVRTSSGQDGWV 430
>gi|123508391|ref|XP_001329629.1| lysozyme [Trichomonas vaginalis G3]
gi|121912675|gb|EAY17494.1| lysozyme, putative [Trichomonas vaginalis G3]
Length = 325
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 15/121 (12%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ N R GP ++ + G V V +W Q+ ++G G+ +
Sbjct: 31 VCTSSNGINIRNGPSTSNGILGA-IGYGASVPVTGRSGDWWQVS-YNGQTGYCYSEFVRV 88
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N + + P IV+ + G + I W + G
Sbjct: 89 PGTV---------NANGGLFIRSGPGTGFGIVSSLANGASVQITNVRNNWFYV----GNG 135
Query: 178 W 178
W
Sbjct: 136 W 136
>gi|123470508|ref|XP_001318459.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901219|gb|EAY06236.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 290
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GPG Y + + G V W + F+G G+I+ L
Sbjct: 42 IRSGPGTNYERIGS-AFAGNQFSVSGYSGVWWHV-AFNGRSGYIHSDYL---------QV 90
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N+ I +N+ P V + L+TI+ S W +GW+ I
Sbjct: 91 TGRVNSNIGVNVRSGPGTNYGRVGGLGNNALVTIKGISSNWFRID----QGWVCADYI 144
>gi|167745327|ref|ZP_02417454.1| hypothetical protein ANACAC_00018 [Anaerostipes caccae DSM 14662]
gi|167655048|gb|EDR99177.1| hypothetical protein ANACAC_00018 [Anaerostipes caccae DSM 14662]
Length = 421
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ-KI 184
N +N+ KK I S +V K + G + T+ + EW + G++K + I
Sbjct: 119 GKAAPNVRSVLNIRKKKSISSPVVGKFKKGNIGTVLKKGKEWSRIRSGKVTGYVKNEYLI 178
Query: 185 WG 186
WG
Sbjct: 179 WG 180
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 7/127 (5%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---SGKR 119
S N R I VV + KG V+K+ + W +IR G++ L S
Sbjct: 127 SVLNIRKKKSISSPVVGKF-KKGNIGTVLKKGKEWSRIR-SGKVTGYVKNEYLIWGSDIH 184
Query: 120 SAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + +K ++ ++ V + S EW +G
Sbjct: 185 SYAKKHNFPKQAVVKVDTLKVRQKQSTKAKVLTLVSRDDSYKVLGESAEWINVKADGDKG 244
Query: 178 WIKKQKI 184
++ K +
Sbjct: 245 YLAKDYV 251
>gi|254410280|ref|ZP_05024060.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
gi|196183316|gb|EDX78300.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
Length = 337
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 10/120 (8%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG+ Y VV T + V + W Q+ W++ + G+
Sbjct: 222 NVRSGPGLGYRVVGT-VADNRTVSLSGRNVSGWSQL----ANGNWVSSRWIVGEGGGATP 276
Query: 125 PWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--TEGWIK 180
+ T N +N+ P + +V V G +T + +G W N GW+
Sbjct: 277 ARDTAVVTTNGSPLNVRSGPGLGYRVVDTVADGAAITTDQTAGNWVRLANGGWVFSGWVA 336
>gi|228930242|ref|ZP_04093250.1| hypothetical protein bthur0010_49230 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228829383|gb|EEM75012.1| hypothetical protein bthur0010_49230 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 294
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|254509790|ref|ZP_05121857.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
gi|221533501|gb|EEE36489.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
Length = 195
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRD-FDGTIGWINKSLLSG 117
I +R N R GPG +Y V+ T G VEV+ + W ++R D +GWI+ SL+
Sbjct: 134 ISGTRVNMRDGPGTIYPVI-AKATIGQRVEVLGDSGTGWLRLRLFPDQRVGWISASLVRK 192
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGW 178
+ + + + +N+ P ++AK G + + SG W GW
Sbjct: 125 VEPEKDIREISGTRVNMRDGPGTIYPVIAKATIGQRVEVLGDSGTGWLRLRLFPDQRVGW 184
Query: 179 IKKQKI 184
I +
Sbjct: 185 ISASLV 190
>gi|52140325|ref|YP_086505.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|65317210|ref|ZP_00390169.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
gi|228917847|ref|ZP_04081384.1| hypothetical protein bthur0012_50480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228948960|ref|ZP_04111233.1| hypothetical protein bthur0007_50820 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|51973794|gb|AAU15344.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
gi|228810716|gb|EEM57064.1| hypothetical protein bthur0007_50820 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228841783|gb|EEM86893.1| hypothetical protein bthur0012_50480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 294
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229094342|ref|ZP_04225416.1| hypothetical protein bcere0021_50470 [Bacillus cereus Rock3-42]
gi|228689020|gb|EEL42845.1| hypothetical protein bcere0021_50470 [Bacillus cereus Rock3-42]
Length = 294
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|325266153|ref|ZP_08132837.1| bacterial SH3 domain protein [Kingella denitrificans ATCC 33394]
gi|324982383|gb|EGC18011.1| bacterial SH3 domain protein [Kingella denitrificans ATCC 33394]
Length = 171
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 16/138 (11%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
AN R P ++ ++ +++ W +I+ G G++++S ++ I
Sbjct: 30 GSANVRAAPDTRSKILAELDSESPQRKILGRQGKWLRIQLNGGRTGYVHQSQGYIVQNYI 89
Query: 123 VSPWNRKTNNPIYINLYKKP-DIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLD----- 174
V+ + N + +P QS I+ + G I G+W + N
Sbjct: 90 VASPDGSANVRHNVIDEGQPITRQSEILTTLPNGTRAQIIPKLNRGDWLYYTNQGAYTEK 149
Query: 175 --------TEGWIKKQKI 184
EG+I K ++
Sbjct: 150 NEYGNNVHIEGYIHKSQL 167
>gi|157376977|ref|YP_001475577.1| SH3 domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157319351|gb|ABV38449.1| SH3 domain protein [Shewanella sediminis HAW-EB3]
Length = 181
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 55 PRFVTIKASRANS--RIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWIN 111
PR+++ + GPG Y ++ + + G + V+ + ++ +I D G GWI
Sbjct: 13 PRYIS---DQVYLYLHGGPGTQYRILGS-IEAGQAISVLGQKEGDYSKIIDHKGREGWIE 68
Query: 112 KSLLSGKRSA 121
++S K+S
Sbjct: 69 TKMISAKKSF 78
>gi|254303641|ref|ZP_04970999.1| glutaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323833|gb|EDK89083.1| glutaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 163
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 18/147 (12%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI------RDF 103
+ V K AN R P V+ L + E W + +
Sbjct: 16 TTFAVRYVVDTKDGYANLREEPNSKSKVI-KKLKNNHEMVFWHEKGEWFYVGAEPNDKYS 74
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
D T G+I++S + + ++ Y N+ + + S ++A+++ G L+T +
Sbjct: 75 DMTDGYIHRSQVK-----LHPETYTVSSKDGYANVRNEATVNSDLIAELKNGTLVTKFKE 129
Query: 164 SGEWCFGYNLDTE------GWIKKQKI 184
GEW + + G+I K ++
Sbjct: 130 KGEWYYIEFEREDGTPFDYGYIHKSQL 156
>gi|116331790|ref|YP_801508.1| hypothetical protein LBJ_2276 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125479|gb|ABJ76750.1| Hypothetical protein LBJ_2276 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 478
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----------EYENWRQIRD-FDGT 106
I+ N R GPG + + G V ++ + +W Q+ D +G
Sbjct: 208 AKIEGKNLNVRTGPGTENPIAFQFKG-GEVVFILDRDTRSETIAGKRGHWNQVVDLRNGN 266
Query: 107 IGWINKSLLSGKRS 120
+GWI L S
Sbjct: 267 VGWIFSGFLKNVPS 280
>gi|116327599|ref|YP_797319.1| hypothetical protein LBL_0831 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120343|gb|ABJ78386.1| Hypothetical protein LBL_0831 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 478
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----------EYENWRQIRD-FDGT 106
I+ N R GPG + + G V ++ + +W Q+ D +G
Sbjct: 208 AKIEGKNLNVRTGPGTENPIAFQFKG-GEVVFILDRDTRSETIAGKRGHWNQVVDLRNGN 266
Query: 107 IGWINKSLLSGKRS 120
+GWI L S
Sbjct: 267 VGWIFSGFLKNVPS 280
>gi|229124747|ref|ZP_04253927.1| hypothetical protein bcere0016_50280 [Bacillus cereus 95/8201]
gi|229187458|ref|ZP_04314600.1| hypothetical protein bcere0004_49920 [Bacillus cereus BGSC 6E1]
gi|228595979|gb|EEK53657.1| hypothetical protein bcere0004_49920 [Bacillus cereus BGSC 6E1]
gi|228658724|gb|EEL14384.1| hypothetical protein bcere0016_50280 [Bacillus cereus 95/8201]
Length = 294
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|163754421|ref|ZP_02161543.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
gi|161325362|gb|EDP96689.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
Length = 253
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
S L ++ + L+ + F ++ +L I ++ + + K R + A +
Sbjct: 147 SFLLYQFAYETLKKRIYFLISFLAFLFIIGTVAIAYQQYGKAQKDRPAIVFAKETTVKSE 206
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
P + V L +G V+V+ +NW++I+ DG IGWI
Sbjct: 207 PNLRSDEVFV-LHEGTKVQVLDTVDNWKKIQLIDGKIGWI 245
>gi|228936527|ref|ZP_04099323.1| hypothetical protein bthur0009_49640 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823115|gb|EEM68951.1| hypothetical protein bthur0009_49640 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 294
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 28/175 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I++ + A F L + ++ + + N R P V
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIY 135
V L G ++V W +I L GK + + + + +
Sbjct: 50 VGKLLN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANV 95
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 LNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|269925132|ref|YP_003321755.1| N-acetylmuramoyl-L-alanine amidase family 2 [Thermobaculum terrenum
ATCC BAA-798]
gi|269788792|gb|ACZ40933.1| N-acetylmuramoyl-L-alanine amidase family 2 [Thermobaculum terrenum
ATCC BAA-798]
Length = 684
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 33/160 (20%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P +V + A N R GPG+ Y V+ T + E+ + + W + + G G+I
Sbjct: 498 PTYV-VTAPAVNLRAGPGMKYKVLRTVPKGAVIQEITSKIDGWVKTV-YGGYTGYIWYEN 555
Query: 115 LSGKRSAIVSPWNRK--------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
L R +P + P +NL K P +Q +V K+
Sbjct: 556 LRVIRRPDSAPASGGSGGSGSNSSFAQTNPVQAYIRGTPGALNLRKGPGMQYQVVTKMWE 615
Query: 155 GVLLT-IRECSGEWCFGYNLD-----TEGWIKKQKIWGIY 188
G+ + I + W D +GW WG Y
Sbjct: 616 GMPVQIIGKSVNGWVPVIYKDGFGRSFQGWA-----WGEY 650
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 12/132 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLL- 115
V + + N R P ++ L G V E+ + W + + G G++ L
Sbjct: 422 VNTRGTGLNLRARPDDRSPIL-AILPDGTIVQEIPSPIDGWVKTT-YKGKTGYLWHGYLK 479
Query: 116 -------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEW 167
S S V+ +NL P ++ ++ V G V+ I W
Sbjct: 480 VIPPVEPSNPSSTSVNKEPTYVVTAPAVNLRAGPGMKYKVLRTVPKGAVIQEITSKIDGW 539
Query: 168 CFGYNLDTEGWI 179
G+I
Sbjct: 540 VKTVYGGYTGYI 551
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTI 107
+ P+ ++ N R GPG+ Y VV T + +G+PV+++ + W + DG
Sbjct: 581 AQTNPVQAYIRGTPGALNLRKGPGMQYQVV-TKMWEGMPVQIIGKSVNGWVPVIYKDGFG 639
Query: 108 ----GWINKSLLSGKRSA 121
GW +S RSA
Sbjct: 640 RSFQGWAWGEYISTDRSA 657
>gi|26990342|ref|NP_745767.1| hypothetical protein PP_3631 [Pseudomonas putida KT2440]
gi|148547323|ref|YP_001267425.1| SH3 type 3 domain-containing protein [Pseudomonas putida F1]
gi|24985300|gb|AAN69231.1|AE016558_1 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148511381|gb|ABQ78241.1| SH3, type 3 domain protein [Pseudomonas putida F1]
Length = 216
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ + L + A H +E R+V+ + R GP + +V T L G
Sbjct: 13 ALRIGLIAALVGLAAPVHAEEPASDA---RWVS-DSLSTYVRSGPTDGHRIVGT-LKSGQ 67
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N+ Q+R +G + WI + L
Sbjct: 68 KLTLLGSQGNYSQVRGQNGDVVWILSNDLQAVP 100
>gi|83952836|ref|ZP_00961566.1| hypothetical protein ISM_11800 [Roseovarius nubinhibens ISM]
gi|83835971|gb|EAP75270.1| hypothetical protein ISM_11800 [Roseovarius nubinhibens ISM]
Length = 231
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P L +S + + + PLP + + + R GP + + V+ LT+ PV +
Sbjct: 142 LAMRLPDLPMSMAEGLPVQLPLPEAMRVTGDAVHLRGGPAVWHEVL-AKLTRDAPVLRLG 200
Query: 93 EYENWRQIRDFDGTI---GWINKSLLSG 117
NW +I G GWI L
Sbjct: 201 TRGNWSRISVGAGAETQSGWIYSRYLDA 228
>gi|307545978|ref|YP_003898457.1| SH3 domain protein [Halomonas elongata DSM 2581]
gi|307218002|emb|CBV43272.1| K07184 SH3 domain protein [Halomonas elongata DSM 2581]
Length = 210
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ R GP Y +V + LT G PVEV+ ++ ++R G W+ L
Sbjct: 33 RWVS-DDLTTYVRSGPTDGYRIVGS-LTAGEPVEVLDTEGDYTEVRSESGDEVWVPSDQL 90
Query: 116 SGKRSAIV 123
SA V
Sbjct: 91 QDTPSARV 98
>gi|167628898|ref|YP_001679397.1| hypothetical protein HM1_1188 [Heliobacterium modesticaldum Ice1]
gi|167591638|gb|ABZ83386.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 286
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEV----- 90
AP +A + R TI ++ N R GPG YTVV T L G V +
Sbjct: 199 APAIAETTAALAAVSTAGLREGTIASTTGVNVRFGPGTDYTVV-TILPSGARVTILASID 257
Query: 91 -VKEYENWRQIRDFDGTIGWINKSLLSGK 118
V + E W +++ DG G++ + L+S K
Sbjct: 258 GVSQAEKWYKVKIPDGREGFVRQDLVSVK 286
>gi|225374830|ref|ZP_03752051.1| hypothetical protein ROSEINA2194_00451 [Roseburia inulinivorans DSM
16841]
gi|225213291|gb|EEG95645.1| hypothetical protein ROSEINA2194_00451 [Roseburia inulinivorans DSM
16841]
Length = 373
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 14/135 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGWINKS 113
+ + N R PG T+V +P EV+ W QI+ + G++
Sbjct: 103 AVVDSGNLNVRETPGTDATLVGK-----MPNHAACEVLGVDGEWTQIQSGE-VTGYVKSE 156
Query: 114 LLS-GKRSAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
L G +A ++ ++T + + ++ + IV + G L + E W
Sbjct: 157 YLVIGNEAAALAEQVKETVAKVTTTTLYVREESNTDCSIVTSMPMGEELEVVEQLDGWVK 216
Query: 170 GYNLDTEGWIKKQKI 184
EG++ I
Sbjct: 217 VSIDSDEGYVSADYI 231
>gi|225571949|ref|ZP_03780819.1| hypothetical protein CLOHYLEM_07923 [Clostridium hylemonae DSM
15053]
gi|225159395|gb|EEG72014.1| hypothetical protein CLOHYLEM_07923 [Clostridium hylemonae DSM
15053]
Length = 169
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 6/163 (3%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
KI +L + S KE + N R G+ V+
Sbjct: 3 KKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATAN--LNLRDDAGLHGKVI 60
Query: 79 CTYLTKGLPVEVVK-EYENWRQIR--DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ KG VEV W ++ D G ++ + + +
Sbjct: 61 TV-MPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAP 119
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ KP+ S I+ + G +T+ W +G+
Sbjct: 120 LNVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGY 162
>gi|329769875|ref|ZP_08261274.1| hypothetical protein HMPREF0433_01038 [Gemella sanguinis M325]
gi|328837929|gb|EGF87553.1| hypothetical protein HMPREF0433_01038 [Gemella sanguinis M325]
Length = 484
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ R GP Y V+ + G +EV+ + ++W +I D IGW+
Sbjct: 51 SKEVEVRTGPDDSYPVL-KKVPAGDVIEVLSKTDSWYEIETSDNYIGWVPGW 101
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + PD ++ KV G ++ + + W + + GW+
Sbjct: 54 VEVRTGPDDSYPVLKKVPAGDVIEVLSKTDSWYEIETSDNYIGWVP 99
>gi|158521500|ref|YP_001529370.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510326|gb|ABW67293.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 190
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F LAI L + +P P +++ + R G G+ +V LT G
Sbjct: 6 FFLAIVVSLLVVF----PGYARAVQPGPAYIS-DTIKITMRTGQGMDNKIVSL-LTVGQA 59
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+EV++ + W IR +G GWI S +S
Sbjct: 60 IEVLEPGDEWSLIRAANGKEGWILSSFISTTP 91
>gi|284008582|emb|CBA75156.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 210
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +F LA+ + + + E + LP F GPG Y ++ +
Sbjct: 4 MRKFPLFILALIGFNLSMTTQAEETLYVSDE-LPTF---------IHRGPGTDYRIIGS- 52
Query: 82 LTKGLPVEVV--KEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
L G V+++ + + QIRD+ G + W+ K+ LS S
Sbjct: 53 LKSGDQVQLLSTDQETGYAQIRDYKGRVAWLPKNQLSQTPSV 94
>gi|328952420|ref|YP_004369754.1| hypothetical protein Desac_0692 [Desulfobacca acetoxidans DSM
11109]
gi|328452744|gb|AEB08573.1| hypothetical protein Desac_0692 [Desulfobacca acetoxidans DSM
11109]
Length = 471
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R V + S R P + P+ W ++ DG +++ SL
Sbjct: 184 RTVVTRRSAV-LRAEPQANGR-PLQTVPTNTPLAATAMQGGWFVVKTADGGKAFVDNSL- 240
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV----EPGVLLTIRECSGEWCFGY 171
+ P + L++ P S + V E V L +R G W
Sbjct: 241 ------VEVPPRQVEGKYNTATLFQGPGQDSRKIRTVYLDGEYRV-LDMRYRRGLWYKID 293
Query: 172 NLDTEGWIKKQKI 184
DT+GW+ +
Sbjct: 294 LGDTQGWVAGHLV 306
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYT-VVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWI 110
PR V K + A GPG + YL V+ W +I D T GW+
Sbjct: 245 PRQVEGKYNTATLFQGPGQDSRKIRTVYLDGEY--RVLDMRYRRGLWYKI-DLGDTQGWV 301
Query: 111 NKSLLSGK 118
L+ K
Sbjct: 302 AGHLVDPK 309
>gi|127511550|ref|YP_001092747.1| SH3 domain-containing protein [Shewanella loihica PV-4]
gi|126636845|gb|ABO22488.1| SH3 domain protein domain protein [Shewanella loihica PV-4]
Length = 182
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSL 114
R+++ GPG Y ++ + + G PV + E ++ ++ D G GW++ +
Sbjct: 15 RYIS-DNVYTFIHGGPGTQYRILGS-VEAGQPVTYLGEMQNDYAKVVDHKGREGWVDSKM 72
Query: 115 LSGKRSAIV----SPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
L +S V N+ + D + ++ ++
Sbjct: 73 LDSGKSFRVQLPEVQAELDRVKAELENITNESDSSTQVIRQL 114
>gi|126175654|ref|YP_001051803.1| SH3 type 3 domain-containing protein [Shewanella baltica OS155]
gi|125998859|gb|ABN62934.1| SH3, type 3 domain protein [Shewanella baltica OS155]
Length = 183
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GPG + ++ + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 28 GPGTEFRILGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFREQVPAL 86
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ D + VA+++
Sbjct: 87 TTELTQAKAKLAEVLSSTDNHADEVAELKA 116
>gi|262068123|ref|ZP_06027735.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium periodonticum
ATCC 33693]
gi|291378211|gb|EFE85729.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium periodonticum
ATCC 33693]
Length = 163
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 18/146 (12%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI------RDF 103
+ V K AN R V+ L + E W + ++
Sbjct: 16 TSFAVRYVVDTKDGYANLREEANSKSKVI-KKLKNNHEMVFWHEEGEWFYVGAEPNDKNT 74
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
D T G+I+KS L ++ Y N+ + + S +AK++ G L+T
Sbjct: 75 DMTDGYIHKSQLKLHPETYTI-----SSKDGYANVRNEAAVDSHPIAKLKNGTLVTKFRE 129
Query: 164 SGEWCFGYNLDTE------GWIKKQK 183
+GEWC+ + G+I K +
Sbjct: 130 NGEWCYIEFDSEDGTPFDYGYIHKSQ 155
>gi|110804016|ref|YP_699920.1| bacteriocin [Clostridium perfringens SM101]
gi|110684517|gb|ABG87885.1| bacteriocin [Clostridium perfringens SM101]
Length = 879
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y + L +G V +V + W +I+ + G+++ + ++P
Sbjct: 586 NVRKGPGTDYDSIGQ-LHQGDKVSIVAKNGTWYKIK-YGSGYGYVHSDFVKNDTVLPITP 643
Query: 126 WNRKTNNPIYIN 137
+ N
Sbjct: 644 EENDKDKEQAKN 655
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++N+ K P + ++ G ++I +G W G++ +
Sbjct: 584 FLNVRKGPGTDYDSIGQLHQGDKVSIVAKNGTWYKIKYGSGYGYVHSDFV 633
>gi|21307709|gb|AAK60474.1| unknown [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 160
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 61 KASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTI----GWINKSL 114
+ N R ++ G EV+K+ +W I+ + G+I++S
Sbjct: 32 DGTSVNLREKASSNSKILAKLEIFDGG---EVIKKEGDWYYIKYRTESEKILYGYIHESQ 88
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ +VS + Y N+ +P I + G +L + + GEW D
Sbjct: 89 GFLVETYVVS------SKDGYANIRWEPSSNGKIAGTEKDGTILEVYDEKGEWLHITYGD 142
Query: 175 T----EGWIKKQKI 184
+ ++ K ++
Sbjct: 143 SPHFPVAYVHKSQV 156
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-----GWIKKQK 183
N+ +NL +K S I+AK+E + + G+W + G+I + +
Sbjct: 31 NDGTSVNLREKASSNSKILAKLEIFDGGEVIKKEGDWYYIKYRTESEKILYGYIHESQ 88
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG---TIGWINKSL 114
V+ K AN R P + T G +EV E W I D + +++KS
Sbjct: 97 VSSKDGYANIRWEPSSNGKIAGT-EKDGTILEVYDEKGEWLHITYGDSPHFPVAYVHKSQ 155
Query: 115 LSGK 118
+ +
Sbjct: 156 VKKE 159
>gi|84685507|ref|ZP_01013405.1| DNA topoisomerase IV subunit A [Maritimibacter alkaliphilus
HTCC2654]
gi|84666664|gb|EAQ13136.1| DNA topoisomerase IV subunit A [Rhodobacterales bacterium HTCC2654]
Length = 191
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ + A + P P ++ + SR N R GP Y V+ + L+ G VE
Sbjct: 101 AVVSTASEPEAAKPLSGTEKATPEPDYLYVTGSRVNVRGGPSTAYGVISS-LSLGTQVED 159
Query: 91 VKEYEN-WRQIRDFD-GTIGWINKSLLS 116
+ + + WRQI D G G++ LS
Sbjct: 160 MGDAGDGWRQIVLTDTGERGFMAGRFLS 187
>gi|282901561|ref|ZP_06309481.1| Serine/threonine-protein kinase [Cylindrospermopsis raciborskii
CS-505]
gi|281193532|gb|EFA68509.1| Serine/threonine-protein kinase [Cylindrospermopsis raciborskii
CS-505]
Length = 510
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVV-----KEYENWRQIRDFD-GTIGWINKSLLS 116
N R GPG Y V+ T G PV+++ ++ W Q+ + GT GWI L++
Sbjct: 453 NIRSGPGTTYKVLGT-ADTGDPVKILGSSYDQDNYQWYQVYHPNSGTTGWIAAQLIN 508
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--- 166
IN S S + +V P Y N+ P ++ + G + I S +
Sbjct: 433 INSSQTSQTDAIVV-------GQPGYKNIRSGPGTTYKVLGTADTGDPVKILGSSYDQDN 485
Query: 167 --WCFGYNL--DTEGWIKKQKI 184
W Y+ T GWI Q I
Sbjct: 486 YQWYQVYHPNSGTTGWIAAQLI 507
>gi|300856086|ref|YP_003781070.1| hypothetical protein CLJU_c29200 [Clostridium ljungdahlii DSM
13528]
gi|300436201|gb|ADK15968.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 424
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 13/114 (11%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWIN-----------KSLLSGKRSAIVSPWNRKT 130
L G V ++ +W ++ +G G+++ + S + + + + +
Sbjct: 312 LANGTAVNILGTSGSWYKVT-ANGKSGYVSSSYISNSQSIVATAASVQSTTLKTGTVTLS 370
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL P IV+ + G +TI G W G++ I
Sbjct: 371 NKSSVLNLRSNPWTG-RIVSTLSSGTKVTITGTDGRWYKVTVGSLTGYVHSDYI 423
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 27/143 (18%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI------- 110
++ +S N R G + V+ L KG V +V +W +I+ ++ + G++
Sbjct: 203 ISNSSSTLNVRNGAATSFGVIG-GLKKGQSVAIVGSVGSWYKIK-YNSSYGYVSSSFISA 260
Query: 111 --------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
LS ++ S + + +++ +NL P ++ + G
Sbjct: 261 SSQASPSSQPSSNSEAQYLS--PASAKSGYVKLSDSSSSLNLRTSPGGS--VIGSLANGT 316
Query: 157 LLTIRECSGEWCFGYNLDTEGWI 179
+ I SG W G++
Sbjct: 317 AVNILGTSGSWYKVTANGKSGYV 339
>gi|187924610|ref|YP_001896252.1| SH3 type 3 domain protein [Burkholderia phytofirmans PsJN]
gi|187715804|gb|ACD17028.1| SH3 type 3 domain protein [Burkholderia phytofirmans PsJN]
Length = 316
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIK 180
V+ + +N+ P +V ++ GV L++ C +WC + GW+
Sbjct: 24 VACAQSQAYTNTTVNVRAGPAPDYPVVTQLPGGVPLSVMGCISSYQWCDVAAPNLRGWVY 83
Query: 181 KQKI 184
+
Sbjct: 84 AGSL 87
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L+ L + A +LAL + + N R GP Y VV T
Sbjct: 1 MKRHLVRCLRCLYAAAGVLALPAVACAQSQ-------AYTNTTVNVRAGPAPDYPVV-TQ 52
Query: 82 LTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLS 116
L G+P+ V+ W + GW+ LS
Sbjct: 53 LPGGVPLSVMGCISSYQWCDVAAP-NLRGWVYAGSLS 88
>gi|218658649|ref|ZP_03514579.1| hypothetical protein RetlI_02771 [Rhizobium etli IE4771]
Length = 152
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGIRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 17/96 (17%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+ +++ A+ + V + N R GPG Y V
Sbjct: 3 LKRNILLAGAVLLATGGLAQA-------------EMVATTVNDLNVRAGPGPQYPAVGL- 48
Query: 82 LTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
T+G + E W ++ D +G GW+ L
Sbjct: 49 ATRGSTAVLDGCIEGSRWCRV-DVNGIRGWVYADYL 83
>gi|225027243|ref|ZP_03716435.1| hypothetical protein EUBHAL_01499 [Eubacterium hallii DSM 3353]
gi|224955396|gb|EEG36605.1| hypothetical protein EUBHAL_01499 [Eubacterium hallii DSM 3353]
Length = 268
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 90 VVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-NNPIYINLYKKPDIQSI 147
+V+E + W ++ + +G GWIN + + W +T ++ IN +KP
Sbjct: 166 IVQETRDGWGKVSN-NGRTGWINLYYAGCYPESSKAAWKVETLSSAQQINFREKPGEDQR 224
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+AKV L ++E W EGW+K +
Sbjct: 225 SIAKVPENTYLEMKEFKNGWGRTEYGGQEGWVKLSYL 261
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNR---KTNNPIYINLYKKPDIQ 145
+KE + W +++ + G GW+ S L + S + ++ + I +Y++PD+
Sbjct: 93 IKEGKKWGKVK-YAGLSGWMKMSYLKYICQESISIQEDSQIYINVSTEKGIRMYQEPDVT 151
Query: 146 SIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S V K + G ++E W N GWI
Sbjct: 152 SDAVLKGIPYGAEFIVQETRDGWGKVSNNGRTGWI 186
>gi|86131664|ref|ZP_01050262.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85818109|gb|EAQ39277.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 193
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 33/144 (22%)
Query: 61 KASRANSRIGPG-------IMYTVVCTYLTKGLPVEVVKEYENWRQIRDF---------- 103
S N R P I V Y+ + + + W +I++
Sbjct: 58 DKSGTNIRKSPNGEIIKTLIKDDVNFEYM-----LRLTTSQDGWFKIKNPITGSENDINI 112
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP-DIQSIIVAKVEPGVLLTIRE 162
G GWI+ S++S + + ++ L KP D +++++ + + L I
Sbjct: 113 PGGEGWIHGSVIS---------VDTRNYQGEHLKLLDKPGDGETLVIFEDQAAGLHFIEM 163
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWG 186
C G W +GWI+ + + G
Sbjct: 164 C-GNWVKVEYNKHKGWIESKWLCG 186
>gi|149913516|ref|ZP_01902049.1| hypothetical protein RAZWK3B_09446 [Roseobacter sp. AzwK-3b]
gi|149812636|gb|EDM72465.1| hypothetical protein RAZWK3B_09446 [Roseobacter sp. AzwK-3b]
Length = 220
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLS 116
+I + N R GPG Y + L +G V V+++ N W ++R + G +GW+ SL++
Sbjct: 158 SIAGTAVNMRAGPGTQYDRI-ARLGRGDEVAVLQDPGNGWLKLRVVETGRVGWMAGSLVT 216
Query: 117 GK 118
Sbjct: 217 AS 218
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN--LDTEGWIKK 181
P + ++ +N+ P Q +A++ G + +++ W GW+
Sbjct: 153 PDDIRSIAGTAVNMRAGPGTQYDRIARLGRGDEVAVLQDPGNGWLKLRVVETGRVGWMAG 212
Query: 182 QKI 184
+
Sbjct: 213 SLV 215
>gi|120437738|ref|YP_863424.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
gi|117579888|emb|CAL68357.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
Length = 249
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+ L L+FT A+ F++ ++++ + ++ I R P +
Sbjct: 152 RSLNKRLLFTGAVVFFILSLVSVIFAFQQQSYLQDNQYAIIFEEEVEVRDEPNLRGEASF 211
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
L +G +V+++++ W +I +G GW+
Sbjct: 212 E-LHEGTKAKVLEDFQEWSRIELSNGAQGWV 241
>gi|94501768|ref|ZP_01308281.1| hypothetical protein RED65_07529 [Oceanobacter sp. RED65]
gi|94426076|gb|EAT11071.1| hypothetical protein RED65_07529 [Oceanobacter sp. RED65]
Length = 256
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA--SRANSRIGPGIMYTVVCTYL 82
++ + + F L+ +ALS E + P FV +K GPG Y + +
Sbjct: 2 TVALSKILIFTLSAFVALSSIAETSTQDQKPEFVQLKVIDPFLELHTGPGRGYPI-FHVV 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ V V++ NW ++D GW+ + L+
Sbjct: 61 EQDEMVSVLRRRTNWFYVQDSRQRQGWVKQEGLART 96
>gi|29346724|ref|NP_810227.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
gi|29338621|gb|AAO76421.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
Length = 328
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ ++ + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILFFYCLLVVAVVSLKAQEIRPMPADSAYGVVHISVCNMRDE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR + + Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTYEKPDDD 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I +
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISRH 160
>gi|313906488|ref|ZP_07839822.1| cell wall hydrolase SleB [Eubacterium cellulosolvens 6]
gi|313468678|gb|EFR64046.1| cell wall hydrolase SleB [Eubacterium cellulosolvens 6]
Length = 401
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 50/176 (28%), Gaps = 16/176 (9%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKP----------LPRFVTIKASRANSRIGPG 72
++ AI + S + I P + V+ N R
Sbjct: 6 KSFTAIGCAIAMASVLAVPASADDSIDTSAPGDNLYAVDVWQGKAVSYCDVYVNIRSEAS 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR---- 128
I V L G VEVV E W +I G+I LL +A +
Sbjct: 66 IESDRVGVLLP-GCVVEVVGEENGWTKIT-SGYVKGYIRSDLLVTGEAAKDIYQQQNVLS 123
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ I G +T+ + W N G++ + I
Sbjct: 124 GNVAAPVLNIRAGRSTDDDITGYYLGGEEITLTDYQDGWFEVQNNGETGYVSGEYI 179
>gi|117926957|ref|YP_867574.1| SH3 type 3 domain-containing protein [Magnetococcus sp. MC-1]
gi|117610713|gb|ABK46168.1| SH3, type 3 domain protein [Magnetococcus sp. MC-1]
Length = 219
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 12/125 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ + L F + ++ S R+VT R R G G + +
Sbjct: 4 LRPSTKRLASLLLTTLFVVGFGISSSAAT---------RYVT-DEFRIMMRGGAGNQFRI 53
Query: 78 VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ L G VE++++ + W ++R G GW+ + LS + +A +
Sbjct: 54 L-QVLKSGEGVEILEKGDQGWDRVRSSSGRDGWVLRRYLSEQPAARTLLDQAVAQKDQAL 112
Query: 137 NLYKK 141
Sbjct: 113 RDRDG 117
>gi|172057220|ref|YP_001813680.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989741|gb|ACB60663.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 309
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 14/159 (8%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRF-------VTIKASRANSRIGPGIMYTVVCTYLTKG 85
F + A++ F +P+ V + +R GP Y ++ T L KG
Sbjct: 4 LFTTLTVSAIAVA--GFSTYAVPKADAATFYKVKVMNDGLRARTGPATTYGII-TGLDKG 60
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + NW +I + +++ + + V+ + + +
Sbjct: 61 DTYKYLGRTGNWTKI-LYGSRKVYVSSTYVKKYS---VTTSYKIKIMVDNLRVRSSSSTS 116
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S V V G +G+W + ++ +
Sbjct: 117 SSQVGIVNSGQTFRYLGRTGDWIKFLYNGNKRFVHADYV 155
>gi|224368474|ref|YP_002602637.1| hypothetical protein HRM2_13640 [Desulfobacterium autotrophicum
HRM2]
gi|223691190|gb|ACN14473.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 236
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 22/143 (15%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
EK+ Y++ R+ I L + + + +S E L
Sbjct: 4 REKMRYAVTCRQ---------GIVALCVLLAICSSVQVSAETGYVTDMLL---------- 44
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAI 122
R GPG V+ L VE++++ E + ++R DG GW+ ++ + +
Sbjct: 45 LTMRSGPGDGDPVL-KTLPSNTAVEILEKGETYYKVRTGDGGEGWVKGRYITYEPPPNLV 103
Query: 123 VSPWNRKTNNPIYINLYKKPDIQ 145
+ +K D
Sbjct: 104 IKGLEQKIEALEAAGERSSQDAD 126
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
LL+ S VS + + + + P ++ + + I E +
Sbjct: 23 LLAICSSVQVSAETGYVTDMLLLTMRSGPGDGDPVLKTLPSNTAVEILEKGETYYKVRTG 82
Query: 173 LDTEGWIKKQKI 184
EGW+K + I
Sbjct: 83 DGGEGWVKGRYI 94
>gi|296328824|ref|ZP_06871337.1| bacterial SH3 domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154055|gb|EFG94860.1| bacterial SH3 domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 161
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 61 KASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTI----GWINKSL 114
+ N R ++ G EV+K+ +W I+ + G+I++S
Sbjct: 33 DGTSVNLREKASSNSKILAKLEIFDGG---EVIKKEGDWYYIKYRTESEKILYGYIHESQ 89
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ +VS + Y N+ +P I + G +L + + GEW D
Sbjct: 90 GFLVETYVVS------SKDGYANIRWEPSSNGKIAGTEKNGTILEVYDEKGEWLHITYGD 143
Query: 175 T----EGWIKKQKI 184
+ ++ K ++
Sbjct: 144 SPHFPVAYVHKSQV 157
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-----GWIKKQK 183
N+ +NL +K S I+AK+E + + G+W + G+I + +
Sbjct: 32 NDGTSVNLREKASSNSKILAKLEIFDGGEVIKKEGDWYYIKYRTESEKILYGYIHESQ 89
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG---TIGWINKSL 114
V+ K AN R P + T G +EV E W I D + +++KS
Sbjct: 98 VSSKDGYANIRWEPSSNGKIAGTEKN-GTILEVYDEKGEWLHITYGDSPHFPVAYVHKSQ 156
Query: 115 LSGK 118
+ +
Sbjct: 157 VKKE 160
>gi|160893553|ref|ZP_02074337.1| hypothetical protein CLOL250_01107 [Clostridium sp. L2-50]
gi|156864538|gb|EDO57969.1| hypothetical protein CLOL250_01107 [Clostridium sp. L2-50]
Length = 482
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 9/152 (5%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-W 97
+ A + E + R +T + N R +V T G + +VKE + W
Sbjct: 120 VSAQAEEVTCKYPQFQDRCLTTVSDSVNIRATASEDGELVGTLAANG--IALVKEKGDTW 177
Query: 98 RQIRDFDGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+I G+I L A T +N+ ++ D S V ++
Sbjct: 178 TKI-ASGNCEGYIKNDYLVFGDDAGAYAEEHCSKLATITTETLNVREQADGDSDCVTQIP 236
Query: 154 PGVLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
G + S W D G++ +
Sbjct: 237 GGQTYEVLSQSDGWTQLQIDDSVSGYVSSDYV 268
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI----- 184
T +N+ +V + + ++E W + + EG+IK +
Sbjct: 140 TTVSDSVNIRATASEDGELVGTLAANGIALVKEKGDTWTKIASGNCEGYIKNDYLVFGDD 199
Query: 185 WGIYPGE 191
G Y E
Sbjct: 200 AGAYAEE 206
>gi|325528541|gb|EGD05651.1| hypothetical protein B1M_05361 [Burkholderia sp. TJI49]
Length = 184
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 12 VADAQSDAYTNAPAELFAGPAPDYPVVAQLAPGTALDVYGCLSDYTWCDVAVPGVRGWID 71
Query: 181 KQKI 184
Q +
Sbjct: 72 AQLL 75
>gi|89070810|ref|ZP_01158058.1| hypothetical protein OG2516_08623 [Oceanicola granulosus HTCC2516]
gi|89043597|gb|EAR49805.1| hypothetical protein OG2516_08623 [Oceanicola granulosus HTCC2516]
Length = 183
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-RDFDGTIGWINKSLLS 116
V + SR N R GPG ++VV L +G V++ + W + G GW+ L+
Sbjct: 123 VAVAGSRVNMRTGPGTEHSVV-VTLPRGTEATVLETRDGWVHLDVTSTGQSGWMAAYLVE 181
Query: 117 G 117
G
Sbjct: 182 G 182
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ +L + N +N+ P + +V + G T+ E W
Sbjct: 104 VLDALTVATSAPQAEARNVVAVAGSRVNMRTGPGTEHSVVVTLPRGTEATVLETRDGWVH 163
Query: 170 --GYNLDTEGWIKKQKIWGI 187
+ GW+ + GI
Sbjct: 164 LDVTSTGQSGWMAAYLVEGI 183
>gi|167033291|ref|YP_001668522.1| SH3 type 3 domain-containing protein [Pseudomonas putida GB-1]
gi|166859779|gb|ABY98186.1| SH3 type 3 domain protein [Pseudomonas putida GB-1]
Length = 216
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L + A H +E R+V+ + R GP + +V T L G + ++
Sbjct: 18 LIAALVTLAAPVHAEEPASDA---RWVS-DSLSTYVRSGPTDGHRIVGT-LKSGQKLTLI 72
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKR 119
N+ Q+R +G + WI + L
Sbjct: 73 GSQGNYSQVRGQNGDVVWILSNDLQAVP 100
>gi|90023189|ref|YP_529016.1| hypothetical protein Sde_3549 [Saccharophagus degradans 2-40]
gi|89952789|gb|ABD82804.1| protein of unknown function DUF1058 [Saccharophagus degradans 2-40]
Length = 259
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+++P V I N G G Y + L KG V + K+ +W ++ +G G
Sbjct: 32 PKEEPDGLAVVIADPFVNVHTGAGRGYPI-FHILEKGETVWLQKQRTDWFKVVMKNGKSG 90
Query: 109 WINKSLLSGK 118
W+ +S L+
Sbjct: 91 WVKRSTLNAT 100
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKI 184
++N++ I +E G + +++ +W GW+K+ +
Sbjct: 44 ADPFVNVHTGAGRGYPIFHILEKGETVWLQKQRTDWFKVVMKNGKSGWVKRSTL 97
>gi|298530080|ref|ZP_07017482.1| SH3 type 3 domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509454|gb|EFI33358.1| SH3 type 3 domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 221
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
R GP + + VV L G +V++E ++ ++R DG GW+
Sbjct: 32 SITMRTGPSLQHRVV-RMLPSGTSFQVLEESGDYYRVRITDGNEGWV 77
>gi|169344011|ref|ZP_02865002.1| putative enterotoxin [Clostridium perfringens C str. JGS1495]
gi|169297919|gb|EDS80014.1| putative enterotoxin [Clostridium perfringens C str. JGS1495]
Length = 956
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 29/127 (22%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---------------------K 118
T ++ G V+++ E +W ++ +++GT+GW + LS
Sbjct: 735 TIMSNGEKVDILDESGSWYKV-NYNGTMGWCSSQFLSNPTVISQSSQSKHVEENKPVYEN 793
Query: 119 RSAIVSPWNRKTNNPIYIN------LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ VS T YI L+ D S ++ + G + + E SG W
Sbjct: 794 KTVEVSKPVNSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVD 853
Query: 172 NLDTEGW 178
GW
Sbjct: 854 QNGNIGW 860
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 21/123 (17%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVS-PWNRKTNNPIY 135
+ KG V V++E +W ++ D +G IGW + L S + S P + +N
Sbjct: 834 MNKGSKVRVLEESGSWFKV-DQNGNIGWCSSEFLTNPVTSKSNTVEESKPVHLVQSNTNE 892
Query: 136 INLYKK--------------PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+L S + + G + I E SG+W GW K
Sbjct: 893 ASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGDWVKVRYNGNIGWCAK 952
Query: 182 QKI 184
+ I
Sbjct: 953 EFI 955
>gi|52550795|gb|AAU84443.1| invasion-associated protein p60 [Listeria innocua]
Length = 475
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
K ++ KP ++ AK E
Sbjct: 142 KATSTPVVKQEVKKETTQ---QVKPATEAKTEAKTE 174
>gi|113971456|ref|YP_735249.1| SH3 domain-containing protein [Shewanella sp. MR-4]
gi|113886140|gb|ABI40192.1| SH3 domain protein domain protein [Shewanella sp. MR-4]
Length = 182
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 55 PRFVTIKASRANSRI--GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWIN 111
PR+++ I GP Y ++ + + G P+ + E ++ +I D G GW+
Sbjct: 13 PRYIS---DNVFLYILNGPSTDYRILGS-IEAGQPITFLGETQGDYSKIIDHKGREGWVP 68
Query: 112 KSLLSGKRSA 121
+++S S
Sbjct: 69 TNMISSTPSF 78
>gi|218670495|ref|ZP_03520166.1| hypothetical protein RetlG_01972 [Rhizobium etli GR56]
Length = 162
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMVATTVNDLNVRAGPGPQYPTVGLATRGSTAVLDGCIAGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 15/95 (15%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+ +++ A+ + V + N R GPG Y V
Sbjct: 3 LKRNILLAGAVLLATGGLAQA-------------EMVATTVNDLNVRAGPGPQYPTVGLA 49
Query: 82 LTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL 115
V + W ++ D +G GW+ L
Sbjct: 50 TRGSTAVLDGCIAGSRWCRV-DVNGMRGWVYADYL 83
>gi|291543830|emb|CBL16939.1| Bacterial SH3 domain [Ruminococcus sp. 18P13]
Length = 483
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI---NKSLLSG 117
+ N R GI Y ++ + KG V V W +I ++G +GWI + + G
Sbjct: 213 TNTGLNFRANAGITYEIL-ADIPKGTLVTVEGTSGAWGRIT-YNGKVGWICLEYCTYVEG 270
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S ++ + + + + + + + I E W G
Sbjct: 271 DYSY--PTGRYRSTSDNGLYVRGGVGSTTGAIGMLAYLEEVEILEVQDGWGRLNYQGKTG 328
Query: 178 WI 179
W+
Sbjct: 329 WV 330
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
QIR F G +N +G + +N I I+A + G L+
Sbjct: 184 QIRLFKG----LNPPPTTGNAPVESYYKTGRYTTNTGLNFRANAGITYEILADIPKGTLV 239
Query: 159 TIRECSGEWCFGYNLDTEGWI 179
T+ SG W GWI
Sbjct: 240 TVEGTSGAWGRITYNGKVGWI 260
>gi|218506991|ref|ZP_03504869.1| hypothetical protein RetlB5_04925 [Rhizobium etli Brasil 5]
gi|327188373|gb|EGE55590.1| hypothetical protein RHECNPAF_900045 [Rhizobium etli CNPAF512]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
V + N R GPG Y V T+G + E W ++ D +G
Sbjct: 16 ATGGLAQAEMVATTVNDLNVRAGPGPQYPAVGL-ATRGSTAVLDGCIEGSRWCRV-DVNG 73
Query: 106 TIGWINKSLL 115
GW+ L
Sbjct: 74 MRGWVYADYL 83
>gi|190892754|ref|YP_001979296.1| hypothetical protein RHECIAT_CH0003170 [Rhizobium etli CIAT 652]
gi|190698033|gb|ACE92118.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
V + N R GPG Y V T+G + E W ++ D +G
Sbjct: 16 ATGGLAQAEMVATTVNDLNVRAGPGPQYPAVGL-ATRGSTAVLDGCIEGSRWCRV-DVNG 73
Query: 106 TIGWINKSLL 115
GW+ L
Sbjct: 74 MRGWVYADYL 83
>gi|86358614|ref|YP_470506.1| hypothetical protein RHE_CH03012 [Rhizobium etli CFN 42]
gi|86282716|gb|ABC91779.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
V + N R GPG Y V T+G + E W ++ D +G
Sbjct: 16 ASGGLAQAEMVATTVNDLNVRAGPGPQYPAVGL-ATRGSTAVLDGCIEGSRWCRV-DVNG 73
Query: 106 TIGWINKSLL 115
GW+ L
Sbjct: 74 MRGWVYADYL 83
>gi|298206884|ref|YP_003715063.1| peptidase [Croceibacter atlanticus HTCC2559]
gi|83849518|gb|EAP87386.1| peptidase [Croceibacter atlanticus HTCC2559]
Length = 377
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
IK S AN RIGP + + T L + + V+ + ++W I+ DG ++ K+L
Sbjct: 319 IKNSVANIRIGPSSKFDKI-TQLKRNDTITVLGKQDDWLHIKTGDGQKAFVFKTLT 373
>gi|114046357|ref|YP_736907.1| SH3 domain-containing protein [Shewanella sp. MR-7]
gi|113887799|gb|ABI41850.1| SH3 domain protein domain protein [Shewanella sp. MR-7]
Length = 182
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 55 PRFVTIKASRANSRI--GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWIN 111
PR+++ I GP Y ++ + + G P+ + E ++ +I D G GW+
Sbjct: 13 PRYIS---DNVFLYILNGPSTDYRILGS-IEAGQPITFLGETQGDYSKIIDHKGREGWVP 68
Query: 112 KSLLSGKRSA 121
+++S S
Sbjct: 69 TNMISSTPSF 78
>gi|254787797|ref|YP_003075226.1| SH3 domain-containing protein [Teredinibacter turnerae T7901]
gi|237687119|gb|ACR14383.1| bacterial SH3 domain protein [Teredinibacter turnerae T7901]
Length = 210
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
GPG + + + KG + + K Y +W + R G +GW+++ L
Sbjct: 1 MHTGPGHSHPI-FHVVEKGETLHISKRYTDWYKARTLKGKVGWVHRDELRDT 51
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ P I VE G L I + +W GW+ + ++
Sbjct: 1 MHTGPGHSHPIFHVVEKGETLHISKRYTDWYKARTLKGKVGWVHRDEL 48
>gi|218234946|ref|YP_002367398.1| L-alanyl-D-glutamate peptidase [Bacillus cereus B4264]
gi|229150884|ref|ZP_04279095.1| L-alanyl-D-glutamate peptidase [Bacillus cereus m1550]
gi|218162903|gb|ACK62895.1| L-alanyl-D-glutamate peptidase [Bacillus cereus B4264]
gi|228632444|gb|EEK89062.1| L-alanyl-D-glutamate peptidase [Bacillus cereus m1550]
Length = 281
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I S N R GPG Y V+ L KG +V + W + G WI S +
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIYNDPSYIRY 206
Query: 118 KRSAIVSPWNRKTNN-------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + P IV V G W
Sbjct: 207 TGGNVPTPSQSSNEGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 ---GGNQWVSGEYV 277
>gi|209550331|ref|YP_002282248.1| hypothetical protein Rleg2_2752 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536087|gb|ACI56022.1| protein of unknown function DUF1236 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMMATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
+ + N R GPG Y V T+G + E W ++ D +G
Sbjct: 16 ASGGLAQAEMMATTVNDLNVRAGPGPQYPAVGL-ATRGSTAVLDGCIEGSRWCRV-DVNG 73
Query: 106 TIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
GW+ L R + V + + + Y+ + + PG
Sbjct: 74 MRGWVYADYLQVDRGGSQVIVEQHRDEIGVPVVTYESTASVVPVDPQPAPG 124
>gi|303248286|ref|ZP_07334548.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302490311|gb|EFL50223.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 161
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
L LA+ L+ +AL+ + +++ R P + +V +
Sbjct: 4 RKLTLALALAVCLSGAIALAAKV-----------MSVSVRDGQVRQSPSFLGKIVGK-AS 51
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
G V+V E +W ++ G GW++++ L+
Sbjct: 52 YGQSVDVSAEQGDWAKVTLPGGVSGWMHRTALT 84
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
AI + + + + P IV K G + + G+W GW+
Sbjct: 19 AIALAAKVMSVSVRDGQVRQSPSFLGKIVGKASYGQSVDVSAEQGDWAKVTLPGGVSGWM 78
Query: 180 KKQKI 184
+ +
Sbjct: 79 HRTAL 83
>gi|261344804|ref|ZP_05972448.1| hypothetical protein PROVRUST_06071 [Providencia rustigianii DSM
4541]
gi|282567251|gb|EFB72786.1| arylsulfatase [Providencia rustigianii DSM 4541]
Length = 203
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ S R GPG Y +V + L G VE++ + QI+D G WI L
Sbjct: 25 RYVSEDLST-YVRSGPGTNYRIVGS-LNAGESVELISIDNKFAQIKDGKGRTVWIPTDQL 82
Query: 116 SGKRSAIV-SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
S S P N + L + + A+++ V
Sbjct: 83 SDIPSMKSRIPQLEAENQKLRQQLDNIDNTWNARTAEMQQKV 124
>gi|256847118|ref|ZP_05552564.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus coleohominis
101-4-CHN]
gi|256715782|gb|EEU30757.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus coleohominis
101-4-CHN]
Length = 203
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R V I + + GPGI Y V K V + E NW +IR D W+ L+
Sbjct: 39 RTVAIDPATMPIQSGPGISYRHVSITKRKR--VLITGEQRNWYRIRLSDHESAWVPSWLI 96
Query: 116 SGK 118
+ K
Sbjct: 97 NSK 99
>gi|138896739|ref|YP_001127192.1| surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
gi|134268252|gb|ABO68447.1| Surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
Length = 420
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P+ + V + AS N R GP Y+ V L KG V+++ NW IR D G+++
Sbjct: 147 TPIGQAV-VNASSLNVRRGPSTSYSAVSL-LYKGQSVDILHIVGNWAYIRASD-LEGFVS 203
Query: 112 KSLLSGKRSAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+S LS K ++ + KT I + D + VE + L +
Sbjct: 204 RSYLSAKGASQPDAGDALSNYVKTQTIIIDPGHGGNDPGATANGLVEKNINLNV 257
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 25/61 (40%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+P + N +N+ + P V+ + G + I G W + D EG++ +
Sbjct: 147 TPIGQAVVNASSLNVRRGPSTSYSAVSLLYKGQSVDILHIVGNWAYIRASDLEGFVSRSY 206
Query: 184 I 184
+
Sbjct: 207 L 207
>gi|213612334|ref|ZP_03370160.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 167
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|218516735|ref|ZP_03513575.1| hypothetical protein Retl8_25523 [Rhizobium etli 8C-3]
Length = 180
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 15/57 (26%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 2 ATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 58
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
+ + N R GPG Y V T+G + E W ++ D +G GW+ L
Sbjct: 1 MATTVNDLNVRAGPGPQYPAVGL-ATRGSTAVLDGCIEGSRWCRV-DVNGMRGWVYADYL 58
>gi|291562729|emb|CBL41545.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 440
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 16/190 (8%)
Query: 5 AEKILY--SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
A +I+ L + MP+ + ++ + + + +++ ++ + R V+
Sbjct: 4 AGRIIAVCGLSMALMMPQAAYAAETLSVQVSERTG-LTTVGNKQSAYDNVAISR-VS--- 58
Query: 63 SRANSRIGPGIMYTVVCTYL---TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---- 115
+ N R ++V + V E W QI+ G+I +
Sbjct: 59 NYVNIRSEANTSSSIVGKIYNNCAATILATVDGEGGTWYQIK-SGNVTGYIKSAYFITGA 117
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD- 174
+R A T + + L ++P S ++ + + G++ +
Sbjct: 118 DAERIAKDIGTVYVTVSADSLRLREQPSTDSAVLTTLSKDAEYLEVKEEGDFIEIQVDES 177
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 178 LSGYVHKDYV 187
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+VT+ A R P V+ T +EV KE ++ +I+ + G+++K ++
Sbjct: 130 YVTVSADSLRLREQPSTDSAVLTTLSKDAEYLEV-KEEGDFIEIQVDESLSGYVHKDYVT 188
Query: 117 GKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ VS + + K+ + +AKVE
Sbjct: 189 QRVEFKQAVSVEEERQKAEEDARIRKEAEDA---IAKVEA 225
>gi|153940165|ref|YP_001392464.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. Langeland]
gi|152936061|gb|ABS41559.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. Langeland]
gi|295320450|gb|ADG00828.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. 230613]
Length = 300
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ-IRDFDG-TIGWINKSLLSG 117
I S N R+ P ++ + + KG V++ + +W + G +I K+ +S
Sbjct: 168 ITGSGVNVRLDP--NGKILGS-VNKGDKVKLYRLEGDWYHCYSLYSGYNRCYIYKNYVSI 224
Query: 118 KRSAIVS-------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+ S N P +N+ S I+ + G + + G+W
Sbjct: 225 QGSSNGSSSGTNLDGKTGVINTPSGVNVRADKSTSSKILGTLSNGSKVQLYRKEGDWMHI 284
Query: 171 YNLDTEGWIKKQKI 184
Y G++ + I
Sbjct: 285 YYPKQGGYVYAKYI 298
>gi|296503185|ref|YP_003664885.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
gi|296324237|gb|ADH07165.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
Length = 311
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 39/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I N R GPG Y V+ L KG +V E W + G W+ S +
Sbjct: 182 INGDNVNLRKGPGTGYAVI-RKLGKGECYQVWGESNGWLNL----GGDQWVYNDSSYIRY 236
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+P + + + P +V V G S W
Sbjct: 237 TGENAPAPSKSSNDGIGVVIITADVLRVRTGPGTNYGVVKNVYQGEKYQAWGYSDGWYNV 296
Query: 171 YNLDTEGWIKKQKI 184
+ WI + +
Sbjct: 297 ---GGDQWISGEYV 307
>gi|295695421|ref|YP_003588659.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
gi|295411023|gb|ADG05515.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
Length = 385
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GPG Y + + G EV+ W IR DG G+++ + +
Sbjct: 329 VNFRAGPGTDYPTLGRLVH-GTGFEVLDRQPGWLHIRLGDGREGYVSAAFV 378
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+ + ++N P + ++ G + + W EG++
Sbjct: 315 VTEQTLMGRVSGEWVNFRAGPGTDYPTLGRLVHGTGFEVLDRQPGWLHIRLGDGREGYV 373
>gi|255283108|ref|ZP_05347663.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
gi|255266410|gb|EET59615.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
Length = 465
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 9/171 (5%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ + KI + +A + P+ A + E + F + N R +
Sbjct: 1 MKNRLVKITAFVMSANMAFSWAATPVFAEEDAADAGEIGTIA-FAQCDS-YINIRSSADV 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIV--SPWNRK 129
V L V +V + +W QI G+++ + AI +N
Sbjct: 59 DSEVTGK-LFNNCAVTIVGKEGDWYQIT-SGNASGYVSAEYFATGEEADAIADKVAYNVA 116
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+P +N+ P S +V L + + +G+W DT G+I
Sbjct: 117 QVHPEVLNVRSAPSEDSEVVDVATQSEELEVVDWNGDWMTVAINSDTYGYI 167
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
YIN+ D+ S + K+ +TI G+W + + G++ +
Sbjct: 49 YINIRSSADVDSEVTGKLFNNCAVTIVGKEGDWYQITSGNASGYVSAE 96
>gi|291538761|emb|CBL11872.1| Bacterial SH3 domain [Roseburia intestinalis XB6B4]
Length = 399
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
N R + T L KG + W + +++G G+I L+ K
Sbjct: 260 YAVDTVNVRAAADTESDKIGT-LEKGTALTRTGTDGEWS-VVNYNGQTGYIKTEYLTTKN 317
Query: 120 ---------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
++ IN+ + G +T+
Sbjct: 318 SDSDSDNGGNEEQTTTSNFIAEGTVITLSDSINIRSGMSENDSKIGTAFSGEKVTVVMSY 377
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+ W G+IK +
Sbjct: 378 AEGWTKVTWNGQTGYIKTSLL 398
>gi|240145657|ref|ZP_04744258.1| N-acetylmuramoyl-L-alanine amidase [Roseburia intestinalis L1-82]
gi|257202245|gb|EEV00530.1| N-acetylmuramoyl-L-alanine amidase [Roseburia intestinalis L1-82]
gi|291536369|emb|CBL09481.1| Bacterial SH3 domain [Roseburia intestinalis M50/1]
Length = 449
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 18/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
N R + T L KG + W + +++G G+I L+ K
Sbjct: 310 YAVDTVNVRAAADTESDKIGT-LEKGTALTRTGTDGEWS-VVNYNGQTGYIKTEYLTTKN 367
Query: 120 ---------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
++ IN+ + G +T+
Sbjct: 368 SDSDSDNGGNEEQTTTSNFIAEGTVITLSDSINIRSGMSENDSKIGTAFSGEKVTVVMSY 427
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+ W G+IK +
Sbjct: 428 AEGWTKVTWNGQTGYIKTSLL 448
>gi|153007397|ref|YP_001368612.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151559285|gb|ABS12783.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 235
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI-WGIYPG 190
+N+ P +A + G + C WC YN GW+ + + +G Y G
Sbjct: 40 VNVRSGPGSNYGRLAALPAGATVNAGSCRNGWCQIYNGSRVGWVSARYVRFGAYSG 95
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+L N+ I A+ A++ +V+ + N R GPG Y
Sbjct: 3 LFKGMLTNNRILGAAVIAATLFTPAIASAATA--------YVS---ASVNVRSGPGSNYG 51
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLL 115
+ L G V W QI ++G+ GW++ +
Sbjct: 52 RL-AALPAGATVNAGSCRNGWCQI--YNGSRVGWVSARYV 88
>gi|300173387|ref|YP_003772553.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc gasicomitatum LMG
18811]
gi|299887766|emb|CBL91734.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc gasicomitatum LMG
18811]
Length = 300
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++K++ L +I L + IL+L ++ +I + + R GPG
Sbjct: 2 IKKWLLSNLIGIVITALVLITTFGLILSLVNKDKIAT----------RPNNVQFRTGPGR 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGK--RSAIVSPWNRKT 130
Y L G + ++ + W ++R D GW+ + K R+A
Sbjct: 52 TYK-STASLKSGTDLIILNKTRGWYKVRRTDNEKIGWVAGWVAESKTLRTATPISEATIV 110
Query: 131 NNP 133
+P
Sbjct: 111 LDP 113
>gi|227818486|ref|YP_002822457.1| hypothetical protein NGR_b02380 [Sinorhizobium fredii NGR234]
gi|227337485|gb|ACP21704.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 268
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ +A L A++ E + N R GP Y + + G
Sbjct: 5 LLKIAATAMLLLAPAIAQAAEGYATAN-----------VNMRAGPSTAYPAITV-IPAGE 52
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSL---LSGKRSAIVSPW 126
+E+ + W + +DG GW++ L +R V P
Sbjct: 53 SIEIYGCLADVPWCDVEFYDG-RGWVHGRYIQALYQQRRVYVGPQ 96
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 7/82 (8%)
Query: 110 INKSLLSGKRSAI-----VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ ++LL +A+ + +N+ P + + G + I C
Sbjct: 1 MERTLLKIAATAMLLLAPAIAQAAEGYATANVNMRAGPSTAYPAITVIPAGESIEIYGCL 60
Query: 165 GE--WCFGYNLDTEGWIKKQKI 184
+ WC D GW+ + I
Sbjct: 61 ADVPWCDVEFYDGRGWVHGRYI 82
>gi|116253199|ref|YP_769037.1| hypothetical protein RL3457 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257847|emb|CAK08945.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 238
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 54 AQAEMMATTVNDLNVRAGPGPQYPSVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYA 113
Query: 182 QKI 184
+
Sbjct: 114 DYL 116
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
+ + N R GPG Y V T+G + E W ++ D +G
Sbjct: 49 ASGGLAQAEMMATTVNDLNVRAGPGPQYPSVGL-ATRGSTAVLDGCIEGSRWCRV-DVNG 106
Query: 106 TIGWINKSLL---SGKRSAIVSPWNRKTNNP 133
GW+ L G S IV + P
Sbjct: 107 MRGWVYADYLQVDHGGSSVIVEQHRAEIGVP 137
>gi|212711176|ref|ZP_03319304.1| hypothetical protein PROVALCAL_02248 [Providencia alcalifaciens DSM
30120]
gi|212686344|gb|EEB45872.1| hypothetical protein PROVALCAL_02248 [Providencia alcalifaciens DSM
30120]
Length = 203
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ S R GPG Y +V + L G VE++ + QI+D G WI L
Sbjct: 25 RYVSEDLST-YVRSGPGTNYRIVGS-LNAGESVELISVDNKFAQIKDGKGRTVWIPTDQL 82
Query: 116 SGKRSA 121
S S
Sbjct: 83 SDIPSM 88
>gi|253573081|ref|ZP_04850473.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
gi|251837338|gb|EES65437.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
Length = 328
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ ++ + E +P+P + + S N R G + + T G+PV
Sbjct: 5 ILFFYCLLVVAVVSLKAQEIRPMPADSAYGVVHISVCNMRDE-GKFTSGMSTQALLGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKKPDIQ 145
+V+ +Y W +I+ D GW+++ +++ WNR + + Y+KP+
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVVTPMSKEQYDEWNRAEKIVVTSHYGFTYEKPNDD 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + +I K
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGRFYKVSYPDGRQAYISKH 160
>gi|291519151|emb|CBK74372.1| Bacterial SH3 domain [Butyrivibrio fibrisolvens 16/4]
Length = 387
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 18/138 (13%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL------- 115
S+ N R + + + KG + + E ++ + D++GT +I KS +
Sbjct: 252 SKVNVRAAADKTSEKLGS-VEKGTEITIYGEEGDFYKF-DYNGTKAYIVKSSVKVSNGDD 309
Query: 116 -----SGKRSAIVSPWNRKTNN---PIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGE 166
+ + ++ K + N+ K D S VA G + + +
Sbjct: 310 TEEQQAENENVTITKSYAKGDKITIKSTTNIRSKMDTSSSKVAVAYEGDTVEVVMSYAEG 369
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + EG+I+ +
Sbjct: 370 WTKVKYKNKEGFIRTDLL 387
>gi|240850161|ref|YP_002971554.1| hypothetical protein Bgr_05530 [Bartonella grahamii as4aup]
gi|240267284|gb|ACS50872.1| hypothetical protein Bgr_05530 [Bartonella grahamii as4aup]
Length = 104
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 21/64 (32%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A +N P Q + + G L+ ++ C G WC GW+
Sbjct: 16 ATTVSEAADAFVTRNLNFRTGPSTQYALCGLISAGELVFVKNCEGNWCHIRYNTQIGWVS 75
Query: 181 KQKI 184
+ +
Sbjct: 76 SRYL 79
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GP Y + ++ G V V NW IR ++ IGW++ LS
Sbjct: 32 NFRTGPSTQYALCGL-ISAGELVFVKNCEGNWCHIR-YNTQIGWVSSRYLS 80
>gi|304411072|ref|ZP_07392688.1| SH3 type 3 domain protein [Shewanella baltica OS183]
gi|307301805|ref|ZP_07581563.1| SH3 type 3 domain protein [Shewanella baltica BA175]
gi|304350607|gb|EFM15009.1| SH3 type 3 domain protein [Shewanella baltica OS183]
gi|306913843|gb|EFN44264.1| SH3 type 3 domain protein [Shewanella baltica BA175]
Length = 192
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GPG + ++ + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 37 GPGTEFRILGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFREQVPAL 95
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ D + VA+++
Sbjct: 96 TTELTQAKAKLAEVLNSTDNHADEVAELKA 125
>gi|163941329|ref|YP_001646213.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163863526|gb|ABY44585.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
Length = 310
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I+ + N R GPG Y V+ L KG EV + W + G WI +
Sbjct: 181 IEGNGINLRKGPGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGDQWIYNDSSYIRY 235
Query: 120 SAIVSPWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + T + + K P IV V G W
Sbjct: 236 TGESAPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNV 295
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 296 ---GGDQWVSGEYV 306
>gi|221632218|ref|YP_002521439.1| cell wall-associated hydrolases [Thermomicrobium roseum DSM 5159]
gi|221156525|gb|ACM05652.1| cell wall-associated hydrolases [Thermomicrobium roseum DSM 5159]
Length = 427
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 20/183 (10%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT-IKASRANSRIGPGI 73
++ +P S LA F +P+LA + + V+ N R PG+
Sbjct: 3 KRRLPLWFVASYCAFLAAIFAFSPVLATNDLVTGALGQ-----VSGTNGDGVNVRAEPGL 57
Query: 74 MYTVVCTYLTKGLPVEVV------KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ V L +G V VV + W +I + G GW+ L+
Sbjct: 58 GASRVG-GLPEGARVRVVEGPRAASDGTTWYRIEN-GGMTGWVLADYLARAVPVAGDTVL 115
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-----TIRECSG-EWCFGYNLDTEGWIKK 181
+ L + ++S ++A + G +++ +G W + +G+
Sbjct: 116 VTGTGGYGLRLRETAGLESRVLAIMPEGGRAVATGSPVQDAAGTSWVPVRHEGVDGYAAL 175
Query: 182 QKI 184
+
Sbjct: 176 AYL 178
>gi|89889809|ref|ZP_01201320.1| putative BatE, tetratricopeptide repeat family [Flavobacteria
bacterium BBFL7]
gi|89518082|gb|EAS20738.1| putative BatE, tetratricopeptide repeat family [Flavobacteria
bacterium BBFL7]
Length = 252
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
Y + L F L I F +A I+++ ++ + A+ +R P
Sbjct: 151 HYSQTAGKKRLFFLLMILFAIATIISIIIGFYAQSNVNKQQYAIVYAAEFTAREEPKQSS 210
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
G VEV++E+ W ++ +G+ W++
Sbjct: 211 AASFVIHE-GTKVEVLEEFNGWSRVALENGSKAWVS 245
>gi|298386623|ref|ZP_06996179.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
gi|298261000|gb|EFI03868.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
Length = 328
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKK 141
G+PV+V+ +Y W +I+ D GW+++ +++ WNR + + Y+K
Sbjct: 60 GMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEQYDEWNRAEKIVVTSHYGFTYEK 118
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
PD S V+ V G L G + + +I K
Sbjct: 119 PDDDSQTVSDVVAGNRLKWEGSKGRFYKVSYPDGRQAYISKH 160
>gi|66046726|ref|YP_236567.1| SH3-like region [Pseudomonas syringae pv. syringae B728a]
gi|63257433|gb|AAY38529.1| SH3-like region [Pseudomonas syringae pv. syringae B728a]
Length = 276
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLA---IYFYLAPILALSHEKEIFEKKPLPRF 57
+F+ KI+ ++ R + + + +F ++ + L + R+
Sbjct: 42 LFSFQIKIIIAMS-RHFSALLSRAPGLFAVSRRLLGAGLVGAALTVVMPGSAQAAGSDRW 100
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V+ + R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 101 VS-DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 156
>gi|327480547|gb|AEA83857.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 222
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 4 HAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS 63
H +L R ++ L +L+ PI A + R+V+
Sbjct: 6 HLSALLSRFTSRHFIGAGLFGALL-------ATTPIHAQENNDSNA------RWVS---D 49
Query: 64 RAN--SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GP Y +V T LT G VE++ ++ Q+R G+ WI L
Sbjct: 50 SLNTFVRSGPTDGYRIVGT-LTSGQKVELISTQGDYSQVRSESGSTVWIPSREL 102
>gi|227822824|ref|YP_002826796.1| hypothetical protein NGR_c22840 [Sinorhizobium fredii NGR234]
gi|227341825|gb|ACP26043.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 207
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q IVA G + C WC GW + +
Sbjct: 36 TDLNVRAGPGPQYPIVALAARGSTTVLEGCIEGSLWCRVNVGGVSGWAYARYL 88
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS-AI 122
N R GPG Y +V +G + E W ++ + G GW L+ +S +
Sbjct: 39 NVRAGPGPQYPIV-ALAARGSTTVLEGCIEGSLWCRV-NVGGVSGWAYARYLAADQSGST 96
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
V R+ + + Y+ S + EP
Sbjct: 97 VVISERRAELGVPVVTYEA--TGSTVATPAEP 126
>gi|222086576|ref|YP_002545110.1| hypothetical protein Arad_3164 [Agrobacterium radiobacter K84]
gi|221724024|gb|ACM27180.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 188
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + P Q V G T+ C WC GW+ Q +
Sbjct: 2 SATTATDMEVRSGPGPQYPTVGMATRGSEATLDGCIQGSRWCRVDVNGMRGWVYAQYL 59
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 67 SRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---GKRSAI 122
R GPG Y V ++ + W ++ D +G GW+ L+ + +
Sbjct: 11 VRSGPGPQYPTVGMATRGSEATLDGCIQGSRWCRV-DVNGMRGWVYAQYLNVEQNGNTLV 69
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
V P I P I A +PG
Sbjct: 70 VEEHRDDLGVPTIIYQQTDPTSTGSIQA-AQPG 101
>gi|229045365|ref|ZP_04192027.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH676]
gi|228724965|gb|EEL76260.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH676]
Length = 281
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G W+
Sbjct: 152 INGSSVNLRKGPGTGYGVI-RQLGKGESYKVFGQTNGWLNL----GGDQWVYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|238789189|ref|ZP_04632977.1| hypothetical protein yfred0001_30300 [Yersinia frederiksenii ATCC
33641]
gi|238722721|gb|EEQ14373.1| hypothetical protein yfred0001_30300 [Yersinia frederiksenii ATCC
33641]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + LA+ + A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLAMLSLTLSLSAYAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ + N+ QIRD G WI LS S V + + +
Sbjct: 50 LKGGDEVTLISVNDDTNYGQIRDSKGKTTWIPLDQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|229178952|ref|ZP_04306310.1| hypothetical protein bcere0005_23060 [Bacillus cereus 172560W]
gi|228604509|gb|EEK61972.1| hypothetical protein bcere0005_23060 [Bacillus cereus 172560W]
Length = 281
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I S N R GPG Y V+ L KG +V + W + G WI S +
Sbjct: 152 INGSNVNLRKGPGTRYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIFNDPSYIRY 206
Query: 118 KRSAIVSPWNRKTNN-------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + P IV V G W
Sbjct: 207 TGGNVPTPSQSSNEGIGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYSV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 ---GGNQWVSGEYV 277
>gi|238918486|ref|YP_002932000.1| signal transduction protein [Edwardsiella ictaluri 93-146]
gi|238868054|gb|ACR67765.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV--VKEYENWRQIRDFDGTIGWINKS 113
RF++ A GPG Y + T + G PV + + + + QIRD G GW+
Sbjct: 26 RFIS-DALSTYVHSGPGNQYRISGT-INAGDPVTLLDINQQSQFAQIRDAKGRSGWLPLD 83
Query: 114 LLSGKRS 120
LS + S
Sbjct: 84 QLSNQPS 90
>gi|163867954|ref|YP_001609158.1| hypothetical protein Btr_0744 [Bartonella tribocorum CIP 105476]
gi|161017605|emb|CAK01163.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 99
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P Q + + G L+ ++ C G WC GW+ + +
Sbjct: 31 LNFRTGPSTQYTVCGLISAGELVFVKNCEGNWCHIRYNAQIGWVSSRYL 79
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 16/91 (17%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ F L + F I + FVT + N R GP YTV ++ G
Sbjct: 6 IFFMLGLCFLTTTISKAAEA-----------FVT---ADLNFRTGPSTQYTVCGL-ISAG 50
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V V NW IR ++ IGW++ LS
Sbjct: 51 ELVFVKNCEGNWCHIR-YNAQIGWVSSRYLS 80
>gi|323698685|ref|ZP_08110597.1| hypothetical protein DND132_1273 [Desulfovibrio sp. ND132]
gi|323458617|gb|EGB14482.1| hypothetical protein DND132_1273 [Desulfovibrio desulfuricans
ND132]
Length = 160
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLLS 116
++++ R PG + VV L G V++ E +WRQ++ DG GW++ S L+
Sbjct: 28 MSVQVRAGQLRDKPGFLSKVVGE-LEYGDQVDLTGEQGDWRQVKSLGDGRAGWMHFSALT 86
Query: 117 GKRSAIVSPWNRKTNNP 133
+R +++P ++
Sbjct: 87 -EREIVLNPTDKDVAAA 102
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
L KP S +V ++E G + + G+W GW+ +
Sbjct: 37 LRDKPGFLSKVVGELEYGDQVDLTGEQGDWRQVKSLGDGRAGWMHFSAL 85
>gi|209551670|ref|YP_002283587.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537426|gb|ACI57361.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 232
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 17/90 (18%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
A F LAP++A + E N R GP Y V + G P
Sbjct: 8 IAAAGLFVLAPVIAQAAEGYSTAN-------------VNMRAGPSTRYPAVAV-VPAGSP 53
Query: 88 VEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
VE+ NW + + G GW++ +
Sbjct: 54 VEIRGCLSNVNWCDVEFYGG-RGWVSGQYV 82
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
V + + +N+ P + VA V G + IR C + WC GW+
Sbjct: 19 VIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCLSNVNWCDVEFYGGRGWVS 78
Query: 181 KQKIWGIY 188
Q + +Y
Sbjct: 79 GQYVQAVY 86
>gi|90420670|ref|ZP_01228576.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334961|gb|EAS48722.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 190
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 19/104 (18%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K+L +L AI P A + + I + N R GP Y
Sbjct: 1 MNKMLFAALAVASAIT---LPASAQAQSRA------------IATTDVNLRAGPSTSYPA 45
Query: 78 VCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKR 119
V + G V V + W + +DG GW++ + L+ R
Sbjct: 46 VNV-VGAGDRVRVFGCLDTRAWCDV-GYDGQRGWMSSNYLADAR 87
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 120 SAIVSPWNRKTNNP----IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNL 173
SAI P + + + +NL P V V G + + C + WC
Sbjct: 13 SAITLPASAQAQSRAIATTDVNLRAGPSTSYPAVNVVGAGDRVRVFGCLDTRAWCDVGYD 72
Query: 174 DTEGWIKKQKI 184
GW+ +
Sbjct: 73 GQRGWMSSNYL 83
>gi|213027467|ref|ZP_03341914.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 153
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|302185609|ref|ZP_07262282.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
syringae 642]
Length = 224
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFVVSRRLLGASLFGAALT-VVMPGSAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSSDL 104
>gi|229181888|ref|ZP_04309196.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228601686|gb|EEK59199.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
Length = 291
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I+ + N R GPG Y V+ L KG +V E W + G W+ S +
Sbjct: 162 IEVNNVNLRKGPGTGYGVI-RQLGKGECYQVWGELNGWLNL----GGDQWVYNDSSYIRY 216
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + + P +V V G S W
Sbjct: 217 TGESAPAPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGEKYQAWGYSDGWYNV 276
Query: 171 YNLDTEGWIKKQKI 184
+ WI + +
Sbjct: 277 ---GGDQWISGEYV 287
>gi|241205715|ref|YP_002976811.1| hypothetical protein Rleg_3015 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859605|gb|ACS57272.1| protein of unknown function DUF1236 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW+
Sbjct: 21 AQAEMMATTVNDLNVRAGPGPQYPSVGLATRGSTAMLDGCIEGSRWCRVDVNGMRGWVYA 80
Query: 182 QKI 184
+
Sbjct: 81 DYL 83
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDG 105
+ + N R GPG Y V T+G + E W ++ D +G
Sbjct: 16 ASGGLAQAEMMATTVNDLNVRAGPGPQYPSVGL-ATRGSTAMLDGCIEGSRWCRV-DVNG 73
Query: 106 TIGWINKSLL---SGKRSAIVSPWNRKTNNP 133
GW+ L G S IV + P
Sbjct: 74 MRGWVYADYLQVDHGGSSVIVEQHRAEIGVP 104
>gi|229916982|ref|YP_002885628.1| peptidase M23 [Exiguobacterium sp. AT1b]
gi|229468411|gb|ACQ70183.1| Peptidase M23 [Exiguobacterium sp. AT1b]
Length = 238
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+++ + + + + +V + + N R GPG Y +V + G
Sbjct: 5 LFSLFCAVLLTVGIFTPAGTPAEAATTYYVKVTTNSLNVRSGPGTTYAIVGS-AKLGQSF 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + W +I +F+GT +++ + +
Sbjct: 64 KYLGVSGGWTKI-NFNGTSRYVSSTYVKK 91
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 15/55 (27%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV + G SG W T ++ +
Sbjct: 35 KVTTNSLNVRSGPGTTYAIVGSAKLGQSFKYLGVSGGWTKINFNGTSRYVSSTYV 89
>gi|325264260|ref|ZP_08130991.1| putative NlpC/P60 family protein [Clostridium sp. D5]
gi|324030331|gb|EGB91615.1| putative NlpC/P60 family protein [Clostridium sp. D5]
Length = 361
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 9/124 (7%)
Query: 62 ASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWI-NKSLLSGK- 118
+ A R P T L EV++ +W +IR G++ SL +GK
Sbjct: 83 SDYAYIRNAP--DETSDWVGKLYSDSSAEVLEYNGDWTKIR-SGSVEGYVPADSLYTGKE 139
Query: 119 --RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDT 175
++A + T +N+ S I+ ++ G + + W T
Sbjct: 140 AEKNAGNYEQHNATVTADVLNVRDGQSTDSNILTRILSGQQYEVTGAAVNGWYPVQVNGT 199
Query: 176 EGWI 179
GW+
Sbjct: 200 TGWV 203
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
Y + PD S V K+ + E +G+W + EG++ ++
Sbjct: 84 DYAYIRNAPDETSDWVGKLYSDSSAEVLEYNGDWTKIRSGSVEGYVPADSLY 135
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLS 116
T+ A N R G ++ L G EV W ++ +GT GW+ ++
Sbjct: 152 ATVTADVLNVRDGQSTDSNILTRIL-SGQQYEVTGAAVNGWYPVQ-VNGTTGWVCGDYVN 209
Query: 117 GKRSAIVSPWNRKTNNPIYIN 137
++ + + +
Sbjct: 210 VEKQFTYAESKAEETERVAAE 230
>gi|310778791|ref|YP_003967124.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
gi|309748114|gb|ADO82776.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
Length = 441
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 45 EKEIFEKKP-LPRFVTIKASRANSRIGPGIMYTVVC--TYLTKGLPV--EVVKEYEN-WR 98
E++ F K P +V +++ R N R GP + T++ YL K LP+ EV + W
Sbjct: 96 ERKYFGKLPETLNYVFVRSRRINLREGPTTISTIISNANYLDK-LPLLEEVTNKQGTKWY 154
Query: 99 QIRDFDGTIGWINKSLLSGK 118
++ D G +++ ++ +
Sbjct: 155 KVLDKSGREVYVHSGVVVKR 174
>gi|218897623|ref|YP_002446034.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus G9842]
gi|218545305|gb|ACK97699.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus G9842]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I+ + N R GPG Y V+ L KG +V E W + G W+ S +
Sbjct: 182 IEGNNVNLRKGPGTGYGVI-RQLGKGECYQVWGELNGWLNL----GGDQWVYNDSSYIRY 236
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+P + + + P +V V G S W
Sbjct: 237 TGENAPAPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGEKYQAWGYSDGWYNV 296
Query: 171 YNLDTEGWIKKQKI 184
+ WI + +
Sbjct: 297 ---GGDQWISGEYV 307
>gi|164688752|ref|ZP_02212780.1| hypothetical protein CLOBAR_02399 [Clostridium bartlettii DSM
16795]
gi|164602228|gb|EDQ95693.1| hypothetical protein CLOBAR_02399 [Clostridium bartlettii DSM
16795]
Length = 249
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
+ + R + KI ++ ++ + I L + + K VT+++ R
Sbjct: 8 KGNKMLLIIGRNIIMKINKSYVVASAIIASTSILPLGNVEQVDAASKT-----VTVES-R 61
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GP Y L KG + + + W +++ + G G++ S +S
Sbjct: 62 VNFRKGPSKKYA-SMRKLHKGYKLTYLGKSGRWVKVK-YKGKTGYVYDSYVS 111
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V ++ +N K P + + K+ G LT SG W G++
Sbjct: 49 VDAASKTVTVESRVNFRKGPSKKYASMRKLHKGYKLTYLGKSGRWVKVKYKGKTGYVYDS 108
Query: 183 KI 184
+
Sbjct: 109 YV 110
>gi|307313435|ref|ZP_07593057.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
gi|306899261|gb|EFN29897.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
Length = 270
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 15/95 (15%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S + + L A++ E F N R GP Y V +
Sbjct: 1 MKSTLLKIVTTGLLLLAPAIAQAAEGFATAN-----------VNMRAGPSTAYPAVTV-I 48
Query: 83 TKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
G +E+ + W + +DG GW++ +
Sbjct: 49 PAGESIEIYGCLADVPWCDVEFYDG-RGWVHGRYI 82
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C + WC D GW+ + I
Sbjct: 32 VNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYI 82
>gi|256828536|ref|YP_003157264.1| SH3 type 3 domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577712|gb|ACU88848.1| SH3 type 3 domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 214
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R GP ++ L PVEV++ ++W +R DG GW+ L+ A
Sbjct: 26 EITLRSGPTNSNKIL-KMLPSSTPVEVLRTDKDWSLVR-ADGVEGWVLARYLTRTTPA 81
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 20/63 (31%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + + I L P + I+ + + + +W EGW+
Sbjct: 13 VAHAQSAYVTDVFEITLRSGPTNSNKILKMLPSSTPVEVLRTDKDWSLVRADGVEGWVLA 72
Query: 182 QKI 184
+ +
Sbjct: 73 RYL 75
>gi|167625490|ref|YP_001675784.1| SH3 domain-containing protein [Shewanella halifaxensis HAW-EB4]
gi|167355512|gb|ABZ78125.1| SH3 domain protein domain protein [Shewanella halifaxensis HAW-EB4]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
I +A L+P L +++ R+++ GPG + ++ + + G
Sbjct: 3 RILIIAGMMLLSPSLLAANQT---------RYISDDV-YIYLHGGPGTQFRILGS-IEAG 51
Query: 86 LPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYK 140
V + E ++ ++ D GWI +LS K S V K
Sbjct: 52 QQVTSLNETQGDFTKVVDHKDREGWIQTKMLSAKPSLRVQLPAIQAELKQTKAELETALS 111
Query: 141 KPDIQSIIVAKVE 153
D + +++V+
Sbjct: 112 SSDSNAQELSQVK 124
>gi|168207093|ref|ZP_02633098.1| bacteriocin [Clostridium perfringens E str. JGS1987]
gi|170661503|gb|EDT14186.1| bacteriocin [Clostridium perfringens E str. JGS1987]
Length = 882
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y + L +G V ++ + W +I G++++ + K+ P
Sbjct: 590 NVRKGPGTDYDSIGQ-LHQGDKVSIIAKSGTWYKISSP--IAGYVHEDFIEDKKIVPSIP 646
Query: 126 WNRKTNNPIYIN 137
+ + N
Sbjct: 647 TQYEKDKEKAKN 658
>gi|268607906|ref|ZP_06141637.1| hypothetical protein RflaF_00210 [Ruminococcus flavefaciens FD-1]
Length = 430
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++Y +PD+ ++A++ G ++ + WC ++ WI +K+ Y GE +
Sbjct: 308 DIYLEPDVSGKVIAELRKGDIVNVTRVLCGWCGVNIDGSDAWIPLEKL--TYAGEGIE 363
>gi|238782844|ref|ZP_04626873.1| hypothetical protein yberc0001_34740 [Yersinia bercovieri ATCC
43970]
gi|238716267|gb|EEQ08250.1| hypothetical protein yberc0001_34740 [Yersinia bercovieri ATCC
43970]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + LA+ A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKIRLICLAVLSLTLSWGAHAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ E N+ QIRD G WI + LS S + + + +
Sbjct: 50 LKGGDEVTLISVDEGTNYGQIRDSKGKTTWIPLNQLSETPSLRIRVPDLEQQVKTLTD 107
>gi|325479716|gb|EGC82806.1| SH3 domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 288
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 18/168 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M I + +L L + + + + K + A N R +
Sbjct: 1 MKNITKYALAAALVLPSVFSIGAKEAKADSVVINKEV-------ADAVNVRSSAEETNNI 53
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + E++ + + +I DF+G ++ G V+ ++T N
Sbjct: 54 IGVINDENRAYEILGKANGFFKI-DFEGREAFV------GTPWFNVT---KETEVLAPSN 103
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
K+ ++ S ++ V G + + E + EG+I +
Sbjct: 104 FRKEDNLSSEVIKVVAEGSKVEVLEEGQNGYVKVKFEGQEGYIYNNLL 151
>gi|304394410|ref|ZP_07376333.1| hypothetical protein R2A130_2046 [Ahrensia sp. R2A130]
gi|303293850|gb|EFL88227.1| hypothetical protein R2A130_2046 [Ahrensia sp. R2A130]
Length = 228
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSGEWCFG--YNLD 174
R+ + + ++N+ P VAK++P V + +R+C WC +
Sbjct: 155 RNVPGAMCVTGVDPSSFLNVRSGPAKTYGNVAKLKPDVCDIAGLRQCINGWCAIVQTSSG 214
Query: 175 TEGWIKKQKI 184
GW+ + I
Sbjct: 215 VTGWVLQDYI 224
>gi|188025653|ref|ZP_02959365.2| hypothetical protein PROSTU_01206 [Providencia stuartii ATCC 25827]
gi|188022632|gb|EDU60672.1| hypothetical protein PROSTU_01206 [Providencia stuartii ATCC 25827]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+++ S GPG Y +V T L G VE++ N+ Q++D G W+ ++ L
Sbjct: 15 RYISDDLST-YVHSGPGTKYRIVGT-LNAGESVELISTDGNFAQVKDERGRTVWLPENQL 72
Query: 116 SGKRSA-IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
S S I P N + L + + A ++ V
Sbjct: 73 SDTPSMKIRIPELEAENQKLRQQLENIDNTWNTRTADMQQRV 114
>gi|60677328|ref|YP_209686.1| protective antigen SpaA-like protein [Clostridium perfringens]
gi|60417963|dbj|BAD90630.1| protective antigen SpaA homolog [Clostridium perfringens]
Length = 475
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y + L +G V +V + W +I+ + G+I+ + ++
Sbjct: 189 NVRKGPGTNYDSIGQ-LHQGDKVSIVAKNGEWYKIK-YGSGYGYIHSNFIN 237
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++N+ K P + ++ G ++I +GEW G+I I
Sbjct: 187 FLNVRKGPGTNYDSIGQLHQGDKVSIVAKNGEWYKIKYGSGYGYIHSNFI 236
>gi|228990162|ref|ZP_04150132.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
gi|228769525|gb|EEM18118.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
Length = 347
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 36/110 (32%), Gaps = 10/110 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I + N R GP + +V+ L G V E NW + GT W+
Sbjct: 227 AVINGNNVNLRSGPSLQASVI-RQLNHGEEYVVWGEQNNWLCL----GTNEWVY-----D 276
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S I T +NL P + I+ ++ G + W
Sbjct: 277 DPSYIQYKHYVATITGDNVNLRDVPSLSGNIIRQLHHGEAYRVWGEQDGW 326
>gi|304316566|ref|YP_003851711.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778068|gb|ADL68627.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 232
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+ N R G + V+ T L V V+ + W I+ +GT+GWI
Sbjct: 40 GNSVNIRSGGSLSSKVI-TQLNWNDVVTVLGQENGWYNIKLSNGTVGWIYG 89
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S+L+ +N+ + S ++ ++ ++T+ W
Sbjct: 20 VGSSMLT---HVYADNLGTGIVIGNSVNIRSGGSLSSKVITQLNWNDVVTVLGQENGWYN 76
Query: 170 GY-NLDTEGWIK 180
+ T GWI
Sbjct: 77 IKLSNGTVGWIY 88
>gi|170725079|ref|YP_001759105.1| SH3 type 3 domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810426|gb|ACA85010.1| SH3 type 3 domain protein [Shewanella woodyi ATCC 51908]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 17/117 (14%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS--RIGPGIMYTVVCTYLT 83
I L L+P L + + R+++ GPG + ++ + +
Sbjct: 3 RILALVGLMLLSPSLLAAGQT---------RYIS---DEVYLFLHGGPGTQFRILGS-VE 49
Query: 84 KGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVS-PWNRKTNNPIYINL 138
G + V+ E N+ +I D G GW+ ++S ++S V P + L
Sbjct: 50 AGQEITVLGEKQGNYSKIIDHKGREGWVETKMISAQKSLRVQLPEVQAELTKTKAEL 106
>gi|228955824|ref|ZP_04117799.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228803853|gb|EEM50497.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 290
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I+ + N R GPG Y V+ L KG EV + W + G WI S +
Sbjct: 161 IEGNGINLRKGPGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGDQWIYNDSSYIHY 215
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + N + + + P IV V G W
Sbjct: 216 TGESTPTSSQSVNNGVGIVTITADVLRVRRGPGTNYGIVKNVYQGEQYQSWGYRDGWYNV 275
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 276 ---GGDQWVSGEYV 286
>gi|193782758|ref|NP_436483.2| hypothetical protein SMa2297 [Sinorhizobium meliloti 1021]
gi|193073214|gb|AAK65895.2| hypothetical protein SMa2297 [Sinorhizobium meliloti 1021]
Length = 270
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 15/95 (15%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S + + L A++ E F N R GP Y V +
Sbjct: 1 MKSTLLKIVTTGLLVLAPAIAQAAEGFATAN-----------VNMRAGPSTAYPAVTV-I 48
Query: 83 TKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
G +E+ + W + +DG GW++ +
Sbjct: 49 PAGESIEIYGCLADVPWCDVEFYDG-RGWVHGRYI 82
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C + WC D GW+ + I
Sbjct: 32 VNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYI 82
>gi|302387312|ref|YP_003823134.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
gi|302197940|gb|ADL05511.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
Length = 347
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 10/129 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V++ N R P +V G V+ E W +I+ G++ L+
Sbjct: 85 VSVAEDSLNIRKEPKNDAEIVGKLKNHAGS--TVLSEENGWYKIK-SGQVTGYVYGKYLA 141
Query: 117 ----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGY 171
+ A N + + KP+ S ++ +V G I C G W
Sbjct: 142 TGQEARAIAYYDMRLLLRVNTETLRVRSKPNTDSEVLGRVHEGETYPFISHCEG-WAKIL 200
Query: 172 NLDTEGWIK 180
+
Sbjct: 201 YKGQTAYAY 209
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 21/53 (39%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K+P + IV K++ T+ W + G++ + +
Sbjct: 88 AEDSLNIRKEPKNDAEIVGKLKNHAGSTVLSEENGWYKIKSGQVTGYVYGKYL 140
>gi|126729739|ref|ZP_01745552.1| hypothetical protein SSE37_04675 [Sagittula stellata E-37]
gi|126709858|gb|EBA08911.1| hypothetical protein SSE37_04675 [Sagittula stellata E-37]
Length = 219
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWC 168
I S ++ + +NL + P Q +V+ + ++++ C+ +WC
Sbjct: 5 IAASAIALTAVTAAPLFALDAATTTELNLREGPGPQYGVVSVMPQDAMVSVDGCTASDWC 64
Query: 169 FGYNLDTEGWIKKQKI 184
EGW +
Sbjct: 65 KVSFDGAEGWAYSPYL 80
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENW 97
I A + PL + N R GPG Y VV + + V V +W
Sbjct: 5 IAASAIALTAVTAAPLFALDAATTTELNLREGPGPQYGVVSV-MPQDAMVSVDGCTASDW 63
Query: 98 RQIRDFDGTIGWINKSLL 115
++ FDG GW L
Sbjct: 64 CKVS-FDGAEGWAYSPYL 80
>gi|330961177|gb|EGH61437.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 224
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 7/113 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ L +L R P + S F + + + + R+V+ +
Sbjct: 3 RHLSALLSRA--PGLFCASRRLLGVGLFGAVLTVIVPGSAQAANNE---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
R GP + +V T L G VE++ + Q+R G WI S L
Sbjct: 57 VRSGPTDDHRIVGT-LKSGQKVELLTSSGKFSQVRGEGGATVWIPSSDLQDVP 108
>gi|256545298|ref|ZP_05472662.1| N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC
51170]
gi|256398979|gb|EEU12592.1| N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC
51170]
Length = 542
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 23/144 (15%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R G G +++ + L+ G V + W +I ++G + +I+ + LS
Sbjct: 247 VNVSALNVRSGAGTSSSIIGS-LSTGDKVSGTLQ-NGWLKIS-YNGQVAYISANCLSNTE 303
Query: 120 -------------------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ + S N +N+ I+ G ++
Sbjct: 304 VKKPVVEKKQENNTPAKQENTVQSQAYTGWVNTAALNVRSGASTSYSIIGSYTMGDKVS- 362
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ + W G+I +
Sbjct: 363 GQLANGWLKVNYNGRSGYISANLL 386
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGK 118
+ + N R G Y+++ +Y +V + W ++ +++G G+I+ +LLS K
Sbjct: 334 VNTAALNVRSGASTSYSIIGSYTMGD---KVSGQLANGWLKV-NYNGRSGYISANLLSSK 389
Query: 119 RSA 121
A
Sbjct: 390 EVA 392
>gi|321160005|pdb|3PVQ|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
gi|321160006|pdb|3PVQ|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
Length = 308
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKK 141
G PV+V+ +Y W +I+ D GW+++ +++ WNR + + Y+K
Sbjct: 40 GXPVKVL-QYTGWYEIQTPDDYTGWVHRXVITPXSKEKYDEWNRAEKIVVTSHYGFTYEK 98
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
PD S V+ V G L G + + +I +
Sbjct: 99 PDDDSQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISRH 140
>gi|161506233|ref|YP_001573345.1| putative signal transduction protein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867580|gb|ABX24203.1| hypothetical protein SARI_04426 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 204
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 QVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|323142890|ref|ZP_08077601.1| SH3 domain protein [Succinatimonas hippei YIT 12066]
gi|322417318|gb|EFY07941.1| SH3 domain protein [Succinatimonas hippei YIT 12066]
Length = 217
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEI-FEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + F A+ +L A + + +V+ +R +R GP Y + +
Sbjct: 4 SKTAFTFIFALLCFLNSAFAAESDNAAQVPTQGETIYVS-DHNRIWTRSGPSSRYRINGS 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ G + ++E + +++ DG W+ L
Sbjct: 63 -VRIGDKLTFLEERGKFYKVKSEDGKEFWMQSDTL 96
>gi|307320015|ref|ZP_07599437.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306894392|gb|EFN25156.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
Length = 270
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 15/95 (15%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S + + L A++ E F N R GP Y V +
Sbjct: 1 MKSTLLKIVTTGLLVLAPAIAQAAEGFATAN-----------VNMRAGPSTAYPAVTV-I 48
Query: 83 TKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
G +E+ + W + +DG GW++ +
Sbjct: 49 PAGESIEIYGCLADVPWCDVEFYDG-RGWVHGRYI 82
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C + WC D GW+ + I
Sbjct: 32 VNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYI 82
>gi|77918114|ref|YP_355929.1| hypothetical protein Pcar_0499 [Pelobacter carbinolicus DSM 2380]
gi|77544197|gb|ABA87759.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 242
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 17/123 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+L+ +A+ L + + I ++ P R GPG Y ++ L
Sbjct: 29 CKALVQVMAVLLLLGGGFSSAWAAYITDQIP-----------VTLRRGPGNEYRIL-KSL 76
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-SGKRSAIVSPWNRKTNNPIYINLYKK 141
T +E++++ +N+ ++R DGT G+I K + + SA+++ ++ L KK
Sbjct: 77 TSPASIEILEDNDNYFKVRTADGTEGYILKQYVIRQEPSAVIAARLQREQTV----LRKK 132
Query: 142 PDI 144
D
Sbjct: 133 VDE 135
>gi|254490069|ref|ZP_05103262.1| cell envelope biogenesis protein YhbN, putative [Methylophaga
thiooxidans DMS010]
gi|224464733|gb|EEF80989.1| cell envelope biogenesis protein YhbN, putative [Methylophaga
thiooxydans DMS010]
Length = 269
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR---DFDGTIGWINKSLL 115
+ ++ N R GPG Y + T+ V V+ +W Q+R D + IGW+N L
Sbjct: 211 LTSTALNVRSGPGTHYLKLGTFAPS-EEVIVLTRQTDWSQVRGMIDGEVVIGWVNSRYL 268
>gi|284047660|ref|YP_003397999.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283951881|gb|ADB46684.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ I + R G G +V Y +G VE+ NW Q++ +G G+++
Sbjct: 136 YGKITGTDVRLRAGAGTHTDIV-DYFDEGEKVEITGRKNNWYQVKRANGQTGYVS 189
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 1/60 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQ 182
+ + + L + IV + G + I W G++ Q
Sbjct: 132 ANQSYGKITGTDVRLRAGAGTHTDIVDYFDEGEKVEITGRKNNWYQVKRANGQTGYVSTQ 191
>gi|289811350|ref|ZP_06541979.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 168
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|228921341|ref|ZP_04084665.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838286|gb|EEM83603.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 281
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I S N R GPG Y V+ L KG +V + W + G WI S +
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGKSNGWLNL----GGDQWIYNDPSYIRY 206
Query: 118 KRSAIVSPWNRKTNN-------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + + + P IV V G W
Sbjct: 207 TGGNVPTSSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 ---GGNQWVSGEYV 277
>gi|228958903|ref|ZP_04120606.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229110121|ref|ZP_04239697.1| hypothetical protein bcere0018_23760 [Bacillus cereus Rock1-15]
gi|229145254|ref|ZP_04273643.1| hypothetical protein bcere0012_24110 [Bacillus cereus BDRD-ST24]
gi|228638093|gb|EEK94534.1| hypothetical protein bcere0012_24110 [Bacillus cereus BDRD-ST24]
gi|228673313|gb|EEL28581.1| hypothetical protein bcere0018_23760 [Bacillus cereus Rock1-15]
gi|228800742|gb|EEM47656.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 281
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G W+
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQTNGWLNL----GGDQWVYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 ---GGNQWVSGEYV 277
>gi|297171155|gb|ADI22165.1| FOG: TPR repeat, SEL1 subfamily [uncultured gamma proteobacterium
HF0200_24F15]
Length = 556
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 37/102 (36%), Gaps = 6/102 (5%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G P++++ + + W +++ W+ ++ + R +
Sbjct: 439 RGTPIKIIDQQQEWARVQIPSPLNVWVYGRYVNQQ-----GDTARIQGEQVRARSMPSTS 493
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
S I+ E +T+ G+W D W++ Q++
Sbjct: 494 SSSAILGIFEENTQVTVISKEGDWIRISVRDVVAAWVQIQQL 535
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G+P++++ +W ++ W+ ++ +
Sbjct: 251 LAAGIPIKILNIDGDWARVNLPAVANVWVYGKY-------VIGEQGNHRIKGARVRARSH 303
Query: 142 PDI--QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG-WIKKQKI 184
P S++V EP + + +W WI Q++
Sbjct: 304 PSTGEDSLVVGLFEPDEPVILLTRREQWKQVAAPSRIPLWIPIQQL 349
>gi|158522434|ref|YP_001530304.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158511260|gb|ABW68227.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 682
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 20/138 (14%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPL---------PRFVTIKASRANSRIGPGIM-YTV 77
LA P + E E + P V N R P + V
Sbjct: 24 VALAFGNSAGPAQDPASETPDSESRQTLSGVTADQPPETVRATVDVLNIRSAPSLDGSRV 83
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V++ E+W +I DGTIG++ + + S+ + + P
Sbjct: 84 A--RLLAGEAAAVLETQEDWLRIETADGTIGYVFRQYTTALPSSEKVSGPAEADAP---- 137
Query: 138 LYKKPDIQSIIVAKVEPG 155
+ ++VA PG
Sbjct: 138 ----ASPKPVVVASATPG 151
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
P +N+ P + VA++ G + E +W T G++ +Q
Sbjct: 59 PPETVRATVDVLNIRSAPSLDGSRVARLLAGEAAAVLETQEDWLRIETADGTIGYVFRQ 117
>gi|296503233|ref|YP_003664933.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
gi|296324285|gb|ADH07213.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
Length = 281
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G W+
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQTNGWLNL----GGDQWVYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|228939786|ref|ZP_04102364.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972674|ref|ZP_04133274.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979260|ref|ZP_04139598.1| hypothetical protein bthur0002_24430 [Bacillus thuringiensis Bt407]
gi|228780461|gb|EEM28690.1| hypothetical protein bthur0002_24430 [Bacillus thuringiensis Bt407]
gi|228787039|gb|EEM35018.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819882|gb|EEM65929.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940437|gb|AEA16333.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 281
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G W+
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQTNGWLNL----GGDQWVYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|16801166|ref|NP_471434.1| hypothetical protein lin2100 [Listeria innocua Clip11262]
gi|16414614|emb|CAC97330.1| lin2100 [Listeria innocua Clip11262]
Length = 764
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
S N R ++ + + VE+ NW ++ +D G++ + L
Sbjct: 432 YAVSSLNLRSEAKWDSSISQVVPEGRAVKVEMDTNVGNWFKVT-YDNKTGYMPLNDLYLS 490
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTE 176
+A++ + K N +NL + S + KVE G +T+ + W +
Sbjct: 491 ETAVLKTYYAKDN----LNLRSEAKWDSEVTQKVEKGEKVTVNSKTSIDGWYEVTYGGKK 546
Query: 177 GWI 179
G++
Sbjct: 547 GYM 549
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 8/123 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
N R ++ + + VE+ W ++ + G+I L
Sbjct: 297 YAVGTLNLRSAANWDSSISLVVPEGRAVKVEMDTNSGPWYKVT-YQNQTGYI--PLTDDY 353
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDTE 176
S + + +NL K S + KV+ G V + ++ W +
Sbjct: 354 LS--KTTVLKTYYAKDNLNLRTKATWDSDVAQKVQKGEKVTVNLKTSVNGWYQVTYGGKK 411
Query: 177 GWI 179
G++
Sbjct: 412 GYM 414
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 9/125 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSG 117
N R V + KG V V + W Q+ + G G++ +L+
Sbjct: 229 YAKDNINLRTKATWDSDVA-QKVQKGEKVTVNLKTNVNGWYQVT-YGGKTGYM---ILNN 283
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+NL + S I V G V + + SG W +
Sbjct: 284 NYLVENPLNMETYYAVGTLNLRSAANWDSSISLVVPEGRAVKVEMDTNSGPWYKVTYQNQ 343
Query: 176 EGWIK 180
G+I
Sbjct: 344 TGYIP 348
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 9/130 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R V + KG V V + W Q+ + G G++ +L+
Sbjct: 364 YAKDNLNLRTKATWDSDVA-QKVQKGEKVTVNLKTSVNGWYQVT-YGGKKGYM---ILND 418
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ + +NL + S I V G V + + G W +
Sbjct: 419 NYLVEKALNMKTYYAVSSLNLRSEAKWDSSISQVVPEGRAVKVEMDTNVGNWFKVTYDNK 478
Query: 176 EGWIKKQKIW 185
G++ ++
Sbjct: 479 TGYMPLNDLY 488
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 9/130 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R V + KG V V + + W ++ + G G++ +L+
Sbjct: 499 YAKDNLNLRSEAKWDSEVT-QKVEKGEKVTVNSKTSIDGWYEVT-YGGKKGYM---ILNN 553
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ +NL + S I V G V + + G W +
Sbjct: 554 NYLVAEPLDLKTYYAVNTLNLRSESKWDSSISQVVPEGAKVKVEMNTSDGNWYKVTYQNK 613
Query: 176 EGWIKKQKIW 185
G++ ++
Sbjct: 614 TGYMPLNDLY 623
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 9/125 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R + + KG V + + W ++ + G G++ +LS
Sbjct: 634 YAKDNLNLRSEAKWDSEIS-QVVEKGEKVTINSKTSINGWHEVT-YGGKKGYM---ILSD 688
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ +NL + S IV + G V + + G W
Sbjct: 689 NYLVEKPLNLKTYYAVGDLNLRGESKWDSDIVQVIPAGTPVKVEMDTNDGIWYKVTYQSK 748
Query: 176 EGWIK 180
G++
Sbjct: 749 TGYMP 753
>gi|160874035|ref|YP_001553351.1| SH3 type 3 domain-containing protein [Shewanella baltica OS195]
gi|160859557|gb|ABX48091.1| SH3 type 3 domain protein [Shewanella baltica OS195]
Length = 183
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GPG + ++ + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 28 GPGTEFRILGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFREQVPAL 86
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ D + V +++
Sbjct: 87 TTELAQAKAKLAEVLSSTDNHADEVTELKA 116
>gi|91784307|ref|YP_559513.1| hypothetical protein Bxe_A1493 [Burkholderia xenovorans LB400]
gi|91688261|gb|ABE31461.1| Hypothetical proline rich protein [Burkholderia xenovorans LB400]
Length = 311
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIK 180
V+ + +N+ P +V ++ GV +++ C +WC + GW+
Sbjct: 21 VAFAQSQAYTNGTVNVRAGPASDYPVVTQLPGGVPVSVMGCISTYQWCDVAAPNLRGWVY 80
Query: 181 KQKI 184
++
Sbjct: 81 AGRL 84
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 30/101 (29%), Gaps = 18/101 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + L L + A A S N R GP Y V
Sbjct: 1 MKQHLVRCLYAVAGVLALPAVAFAQSQA--------------YTNGTVNVRAGPASDYPV 46
Query: 78 VCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLS 116
V T L G+PV V+ W + GW+ LS
Sbjct: 47 V-TQLPGGVPVSVMGCISTYQWCDVAAP-NLRGWVYAGRLS 85
>gi|206972542|ref|ZP_03233486.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH1134]
gi|206732566|gb|EDZ49744.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH1134]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I S N R GPG Y V+ L KG +V + W + G WI S +
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIFNDPSYIRY 206
Query: 118 KRSAIVSPWNRKTNN-------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + P IV V G W
Sbjct: 207 TGGNVPTPSQSSNGGIGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|30020801|ref|NP_832432.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 14579]
gi|229128017|ref|ZP_04256999.1| L-alanyl-D-glutamate peptidase [Bacillus cereus BDRD-Cer4]
gi|29896353|gb|AAP09633.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 14579]
gi|228655292|gb|EEL11148.1| L-alanyl-D-glutamate peptidase [Bacillus cereus BDRD-Cer4]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 37/134 (27%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + +W + G W+
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQTNSWLNL----GGDQWVYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 ---GGNQWVSGEYV 277
>gi|302672118|ref|YP_003832078.1| cell wall hydrolase [Butyrivibrio proteoclasticus B316]
gi|302396591|gb|ADL35496.1| cell wall hydrolase [Butyrivibrio proteoclasticus B316]
Length = 371
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV-- 123
N R P V L K ++++ + W +++ D IGW L A+
Sbjct: 102 NVREEPSEDSAKVGV-LYKDCGGKILERRDGWTKLQSGD-LIGWAKDDYLLFDEDALSLA 159
Query: 124 --SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIK 180
T+ +N+ + D + ++ + V + + E G W D G+++
Sbjct: 160 ADVGKQIVTSQSNALNIRAEADENAEVLGVLTEKVFVDMIEDLGNGWISVDYNDETGYVQ 219
Query: 181 KQKI---WGIYPGEVF 193
+ + I GE
Sbjct: 220 SDYVTSEFKIDQGETI 235
>gi|161616195|ref|YP_001590160.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|198242767|ref|YP_002217184.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354118|ref|YP_002227919.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858461|ref|YP_002245112.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|161365559|gb|ABX69327.1| hypothetical protein SPAB_03998 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197937283|gb|ACH74616.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205273899|emb|CAR38900.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710264|emb|CAR34621.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326624960|gb|EGE31305.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326629237|gb|EGE35580.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|114567146|ref|YP_754300.1| tungstate ABC transporter permease-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114338081|gb|ABI68929.1| ABC-type tungstate transport system permease component-like protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 358
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ N R GPG Y V+ + + KG ++V+ W +++ + ++ L+
Sbjct: 301 ATVNVYALNVRTGPGTNYKVLGSVI-KGTELQVLGSSGKWLKVK-YGNREAYVAGWLVKK 358
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
SP ++ T N +N+ P ++ V G L + SG+W + E ++
Sbjct: 296 SPTDKATVNVYALNVRTGPGTNYKVLGSVIKGTELQVLGSSGKWLKVKYGNREAYVA 352
>gi|315266266|gb|ADT93119.1| SH3 type 3 domain protein [Shewanella baltica OS678]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRS----AIVS 124
GPG + ++ + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 26 GPGTEFRILGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFREQVPAL 84
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ D + V +++
Sbjct: 85 TTELAQAKAKLAEVLSSTDNHADEVTELKA 114
>gi|298290325|ref|YP_003692264.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296926836|gb|ADH87645.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 320
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPGE 191
+NL P ++ +V + G L I C + WC D GW+ Q + +Y G
Sbjct: 28 TDVNLRAGPSVEYPVVLVLAEGSPLDIFGCLEDYSWCDVAVDDYRGWVAAQYVESVYQGR 87
Query: 192 VFK 194
+
Sbjct: 88 RVE 90
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 16/92 (17%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ A+ A + + FVT N R GP + Y VV L +G
Sbjct: 3 ILVAGAMLLMALGGSAFAQGRG---------FVTTD---VNLRAGPSVEYPVVLV-LAEG 49
Query: 86 LPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
P+++ E+ W + D GW+ +
Sbjct: 50 SPLDIFGCLEDYSWCDV-AVDDYRGWVAAQYV 80
>gi|218897686|ref|YP_002446097.1| L-alanyl-D-glutamate peptidase [Bacillus cereus G9842]
gi|218545907|gb|ACK98301.1| L-alanyl-D-glutamate peptidase [Bacillus cereus G9842]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G WI
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIYNDPSYIRY 206
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 207 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|229190767|ref|ZP_04317761.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 10876]
gi|228592727|gb|EEK50552.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 10876]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I S N R GPG Y V+ L KG +V + W + G WI S +
Sbjct: 152 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIFNDPSYIRY 206
Query: 118 KRSAIVSPWNRKTNN-------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + P IV V G W
Sbjct: 207 TGGNVPTPSQSSNEGIGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNV 266
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 267 GGNQ---WVSGEYV 277
>gi|314956998|gb|EFT01106.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA1]
Length = 236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQ 182
+ N T +N+ P ++ ++ G + + E G W GW +
Sbjct: 37 ALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRT 96
Query: 183 KIWG 186
+ G
Sbjct: 97 HLTG 100
>gi|229918041|ref|YP_002886687.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sp. AT1b]
gi|229469470|gb|ACQ71242.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sp. AT1b]
Length = 990
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 17/168 (10%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
L + I + I LAP+ + + E P+ N R ++V
Sbjct: 6 SRLGVATIVSGTILSTLAPLQSYAATSEGTVNTPI----------LNVRSDSSTSSSIVG 55
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYIN 137
LT+G V+V + W QI +F+G +++ + L+ S + + +N
Sbjct: 56 K-LTEGTTVDVYAVNDEWAQI-NFEGQKRYVSSTYLTIGSSMSTASTSSASLYVAEMNVN 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLT---IRECSGEWCFGYNLDTEGWIKKQ 182
L + I + G L+T +G W G++ +
Sbjct: 114 LRSSMSTSASIETVIPKGSLVTHVSTHGATGSWYKVQFGTYTGYVAAR 161
>gi|254460908|ref|ZP_05074324.1| SH3, type 3 [Rhodobacterales bacterium HTCC2083]
gi|206677497|gb|EDZ41984.1| SH3, type 3 [Rhodobacteraceae bacterium HTCC2083]
Length = 170
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFD-GTIGWINKSLLSG 117
+ A+R N R GPG + V+ LT G VE++++ + W ++R D G GW+ LL+
Sbjct: 109 VTAARVNMRDGPGQNFDVI-AKLTNGQQVEILQDPGDGWVKLRVGDTGREGWMADFLLTA 167
Query: 118 KRS 120
+
Sbjct: 168 SNN 170
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL--DTEGWIK 180
+ + +N+ P ++AK+ G + I + W EGW+
Sbjct: 104 ADLREVTAARVNMRDGPGQNFDVIAKLTNGQQVEILQDPGDGWVKLRVGDTGREGWMA 161
>gi|166031877|ref|ZP_02234706.1| hypothetical protein DORFOR_01578 [Dorea formicigenerans ATCC
27755]
gi|166028330|gb|EDR47087.1| hypothetical protein DORFOR_01578 [Dorea formicigenerans ATCC
27755]
Length = 742
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCF 169
+ L + V+ N T N +N+ + +S IV + G L + + +W +
Sbjct: 386 AYTYLRATVNQTVADKNYATVNATMLNVREGKGTESRIVGTMNQGALCYVLADADSDWVY 445
Query: 170 GYNLDTEGWIKKQKI 184
+ D G++ +Q +
Sbjct: 446 VESADVRGFVARQYL 460
>gi|16761977|ref|NP_457594.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766503|ref|NP_462118.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29143464|ref|NP_806806.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62181720|ref|YP_218137.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167551882|ref|ZP_02345635.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990244|ref|ZP_02571344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231805|ref|ZP_02656863.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238164|ref|ZP_02663222.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243032|ref|ZP_02667964.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262836|ref|ZP_02684809.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463586|ref|ZP_02697503.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168819732|ref|ZP_02831732.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194446060|ref|YP_002042470.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448930|ref|YP_002047201.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470164|ref|ZP_03076148.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194738282|ref|YP_002116160.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251903|ref|YP_002148133.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264518|ref|ZP_03164592.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200387239|ref|ZP_03213851.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204928244|ref|ZP_03219444.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|213161052|ref|ZP_03346762.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425622|ref|ZP_03358372.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581444|ref|ZP_03363270.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213645911|ref|ZP_03375964.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224585006|ref|YP_002638805.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910005|ref|ZP_04653842.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289827090|ref|ZP_06545879.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25322897|pir||AB0892 probable membrane protein STY3382 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421760|gb|AAL22077.1| putative SH3 domain protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16504280|emb|CAD07728.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139098|gb|AAO70666.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62129353|gb|AAX67056.1| putative SH3 domain protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194404723|gb|ACF64945.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194407234|gb|ACF67453.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456528|gb|EDX45367.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713784|gb|ACF93005.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633362|gb|EDX51776.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197215606|gb|ACH53003.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242773|gb|EDY25393.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288979|gb|EDY28350.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199604337|gb|EDZ02882.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322566|gb|EDZ07763.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323266|gb|EDZ11105.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331184|gb|EDZ17948.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333854|gb|EDZ20618.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337758|gb|EDZ24522.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205343285|gb|EDZ30049.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348611|gb|EDZ35242.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224469534|gb|ACN47364.1| hypothetical protein SPC_3279 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248333|emb|CBG26170.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995397|gb|ACY90282.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159756|emb|CBW19275.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914230|dbj|BAJ38204.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087657|emb|CBY97421.1| Uncharacterized protein ygiM Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225885|gb|EFX50939.1| Arylsulfatase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322613607|gb|EFY10548.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621199|gb|EFY18057.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624262|gb|EFY21096.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628000|gb|EFY24789.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633117|gb|EFY29859.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636305|gb|EFY33013.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643479|gb|EFY40041.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644802|gb|EFY41337.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648611|gb|EFY45058.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653663|gb|EFY49989.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657771|gb|EFY54039.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663872|gb|EFY60071.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669117|gb|EFY65268.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672890|gb|EFY68997.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678120|gb|EFY74183.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681296|gb|EFY77329.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687774|gb|EFY83741.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716206|gb|EFZ07777.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323131564|gb|ADX18994.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195586|gb|EFZ80763.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199733|gb|EFZ84823.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202519|gb|EFZ87559.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207993|gb|EFZ92939.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212455|gb|EFZ97272.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215063|gb|EFZ99811.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222793|gb|EGA07158.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224126|gb|EGA08419.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230450|gb|EGA14568.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235199|gb|EGA19285.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239239|gb|EGA23289.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244403|gb|EGA28409.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247020|gb|EGA30986.1| SH3 domain-containing protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253499|gb|EGA37328.1| SH3 domain-containing protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256195|gb|EGA39931.1| SH3 domain-containing protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262629|gb|EGA46185.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267276|gb|EGA50760.1| SH3 domain-containing protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269322|gb|EGA52777.1| SH3 domain-containing protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332990069|gb|AEF09052.1| putative signal transduction protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|317121484|ref|YP_004101487.1| cell wall hydrolase/autolysin [Thermaerobacter marianensis DSM
12885]
gi|315591464|gb|ADU50760.1| cell wall hydrolase/autolysin [Thermaerobacter marianensis DSM
12885]
Length = 651
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK- 112
+P + S N R GPG + VV + +G V++ + W Q++ G GW+
Sbjct: 103 VPVRAIVTGSLLNVRSGPGTGFAVV-DRVPEGTVVDLRAKQGGWFQVKTPRGITGWVAGE 161
Query: 113 ---SLLSGKRSAIVSPWNRKTNNPIYIN 137
++L G R +V P + + Y N
Sbjct: 162 YLTAVLDGVR-IVVDPGHGGIDGGAYAN 188
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
R +N+ P +V +V G ++ +R G W GW+ + +
Sbjct: 106 RAIVTGSLLNVRSGPGTGFAVVDRVPEGTVVDLRAKQGGWFQVKTPRGITGWVAGEYL 163
>gi|228912092|ref|ZP_04075812.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228847595|gb|EEM92529.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 310
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I+ + N R GPG Y V+ L KG EV + W + G WI +
Sbjct: 181 IEGNGINLRNGPGTGYGVI-RQLGKGEAYEVWGQSNGWLNL----GGDQWIYNDSSYIRY 235
Query: 120 SAIVSPWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P + + T + + + P IV V G W
Sbjct: 236 TGESTPTSSQSVNNGIGIVTITADVLRVRRGPGTNYGIVKNVYQGEEYQSWGYRDGWYNV 295
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 296 ---GGDQWVSGEYV 306
>gi|319898510|ref|YP_004158603.1| hypothetical protein BARCL_0336 [Bartonella clarridgeiae 73]
gi|319402474|emb|CBI76017.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 121
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +N P Q I++ + ++I+ C G WC GWI
Sbjct: 16 VVTTGHATDAIVIKNLNFRTGPSTQYAILSWIPINQSVSIQTCKGNWCQINYNSRTGWIS 75
Query: 181 KQKI 184
+ +
Sbjct: 76 SRYL 79
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 66 NSRIGPGIMYTVV-CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GP Y ++ V + NW QI +++ GWI+ LS
Sbjct: 32 NFRTGPSTQYAILSWI--PINQSVSIQTCKGNWCQI-NYNSRTGWISSRYLS 80
>gi|161521002|ref|YP_001584429.1| SH3 type 3 domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189352820|ref|YP_001948447.1| hypothetical protein BMULJ_04052 [Burkholderia multivorans ATCC
17616]
gi|160345052|gb|ABX18137.1| SH3 type 3 domain protein [Burkholderia multivorans ATCC 17616]
gi|189336842|dbj|BAG45911.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 VAHAQGDAYTNAPAELFAGPAPDYPVVAQLPPGTALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|238750940|ref|ZP_04612437.1| hypothetical protein yrohd0001_16920 [Yersinia rohdei ATCC 43380]
gi|238710854|gb|EEQ03075.1| hypothetical protein yrohd0001_16920 [Yersinia rohdei ATCC 43380]
Length = 206
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + LA+ + A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLAMLSLSISLGAYAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ N+ QIRD G WI S LS S V + + +
Sbjct: 50 LKGGDEVTLISVDNDTNYGQIRDSKGKTIWIPLSQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|116618380|ref|YP_818751.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116097227|gb|ABJ62378.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 287
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 13/122 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I T++I + ++ KE P + R GPG Y + L G
Sbjct: 13 IIITVSILITVVGLIISLVSKEEIITHP---------NNVQFRNGPGRQYKSL-ASLKSG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ V+ + W Q+R D GW+ + + + + + + D
Sbjct: 63 TRLIVIDKKHGWWQVRRSDNEKVGWVASWV--ANSTILKTAKPISEATIVLDPGHGGSDT 120
Query: 145 QS 146
+
Sbjct: 121 GA 122
>gi|218781306|ref|YP_002432624.1| hypothetical protein Dalk_3468 [Desulfatibacillum alkenivorans
AK-01]
gi|218762690|gb|ACL05156.1| hypothetical protein Dalk_3468 [Desulfatibacillum alkenivorans
AK-01]
Length = 260
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++ LI+ A++F +A S + R V I A + + R GPG +
Sbjct: 160 VMAVGLIWLTAVFFGIAKWYDASQDH---------RAVVI-ADKIDVRAGPGEN-DTLLF 208
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
L G PV + + +W +R GW
Sbjct: 209 QLHDGSPVVLERREGDWSLVRFSQEKRGW 237
>gi|154505665|ref|ZP_02042403.1| hypothetical protein RUMGNA_03204 [Ruminococcus gnavus ATCC 29149]
gi|153794104|gb|EDN76524.1| hypothetical protein RUMGNA_03204 [Ruminococcus gnavus ATCC 29149]
Length = 364
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 67 SRIGPGIMYTVVCTYLTKGLP---VEVVKEYENWRQIRDFDGTIGWINKSLL----SGKR 119
R P K P V V++ E+W +I+ D G++ L K
Sbjct: 87 IRSAPDENS--DWI--GKLYPDSAVRVLEYKEDWVKIQSGD-AQGFVPADTLYLGEDAKS 141
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGW 178
A T +N+ +++ ++ ++ I E W + GW
Sbjct: 142 HAGEYEKEVATVTADVLNVRAGQGVETQVLTQIMQNQEYEITGEPKDGWYPVQAGEIAGW 201
Query: 179 IKKQKI 184
+ + I
Sbjct: 202 VSGEYI 207
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + PD S + K+ P + + E +W + D +G++ + Y
Sbjct: 78 SNTGEEFTYIRSAPDENSDWIGKLYPDSAVRVLEYKEDWVKIQSGDAQGFVPADTL---Y 134
Query: 189 PGE 191
GE
Sbjct: 135 LGE 137
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A F A L L + + + T+ A N R G G+ V+ T + + E+
Sbjct: 124 AQGFVPADTLYLGEDAKSHAGEYEKEVATVTADVLNVRAGQGVETQVL-TQIMQNQEYEI 182
Query: 91 VKE-YENWRQIRDFDGTIGWINKSLLSGKRS 120
E + W ++ + GW++ +S + +
Sbjct: 183 TGEPKDGWYPVQAGE-IAGWVSGEYISIETT 212
>gi|225027502|ref|ZP_03716694.1| hypothetical protein EUBHAL_01758 [Eubacterium hallii DSM 3353]
gi|224955141|gb|EEG36350.1| hypothetical protein EUBHAL_01758 [Eubacterium hallii DSM 3353]
Length = 462
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
G G + T + G + + K + W + ++ WI+ +++ G ++
Sbjct: 329 LHTGAGQDTDIAATDVKYGTELTISKVEDGWGR-TNYQNKECWIDMNVV-GFYTSKYWQV 386
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
R + I L K S + V +C W GW+K
Sbjct: 387 ERCDGSKNGIKLRKSSTEDSEQLTTVPLCTKFQSSDCRNGWARFTYGGKTGWLK 440
>gi|24213799|ref|NP_711280.1| hypothetical protein LA_1099 [Leptospira interrogans serovar Lai
str. 56601]
gi|45658414|ref|YP_002500.1| hypothetical protein LIC12576 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24194629|gb|AAN48298.1| hypothetical protein LA_1099 [Leptospira interrogans serovar Lai
str. 56601]
gi|45601657|gb|AAS71137.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 477
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----------EYENWRQIRD-FDGT 106
I+ N R GPG + + G V ++ + +W QI D +G
Sbjct: 208 AVIEGKNLNVRTGPGTENPISFQFKG-GEIVFILDRDSRTETIAGKRGSWNQIVDLRNGN 266
Query: 107 IGWINKSLLSGKRS 120
+GWI L S
Sbjct: 267 VGWIFSGFLKNIPS 280
>gi|169826706|ref|YP_001696864.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus sphaericus C3-41]
gi|168991194|gb|ACA38734.1| N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC
amidase family [Lysinibacillus sphaericus C3-41]
Length = 620
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 15/136 (11%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---- 116
+ N + P V+ T + + + V K + + DG G++ + +
Sbjct: 295 TKNAVNLYVKPTSSAKVIST-IKTNVKLPVYKTVGGYYLTQ-VDGLPGYVVANSTTDAVE 352
Query: 117 --------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G I S +N+ + + S ++ K+ G + + SG W
Sbjct: 353 EEKPNPDPGTPPVI-SGDVLGRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNSISGYWA 411
Query: 169 FGYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 412 EITYNGQTGYVHKSYL 427
>gi|309790515|ref|ZP_07685073.1| peptidase M23B [Oscillochloris trichoides DG6]
gi|308227431|gb|EFO81101.1| peptidase M23B [Oscillochloris trichoides DG6]
Length = 460
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ AN R GPG Y L +G V + +E+W ++ D T+GWI LL
Sbjct: 259 LQVDEANLRQGPGTEYDRQ-IKLERGRQVALRARHEDWLKVEIAD-TLGWIRADLL 312
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 21/56 (37%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
NL + P + K+E G + +R +W DT GWI+ +
Sbjct: 257 GVLQVDEANLRQGPGTEYDRQIKLERGRQVALRARHEDWLKVEIADTLGWIRADLL 312
>gi|239813187|ref|YP_002942097.1| SH3 type 3 domain protein [Variovorax paradoxus S110]
gi|239799764|gb|ACS16831.1| SH3 type 3 domain protein [Variovorax paradoxus S110]
Length = 264
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS 116
N R GP Y +V L G P++V+ W + DG GW+ L
Sbjct: 34 VNLRAGPSGDYPLV-ARLGPGQPLDVIGCTGGYSWCDVVLPDGGRGWVWARSLD 86
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WC-FGYNLDTEGWIKKQKI 184
+NL P +VA++ PG L + C+G WC GW+ + +
Sbjct: 30 TRGAVNLRAGPSGDYPLVARLGPGQPLDVIGCTGGYSWCDVVLPDGGRGWVWARSL 85
>gi|326801274|ref|YP_004319093.1| NLP/P60 protein [Sphingobacterium sp. 21]
gi|326552038|gb|ADZ80423.1| NLP/P60 protein [Sphingobacterium sp. 21]
Length = 396
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F I S N R P + L G PV+V+++ E + +R DG I W++++ +S
Sbjct: 101 FGVINVSVGNMRTFPKNAAEMASQAL-LGWPVDVLRKKEGYYLVRTIDGYISWLDEAAIS 159
Query: 117 GKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
K + WNRK Y ++Y D +S+ V+ + G +L+ E + +
Sbjct: 160 LKTKPEIDDWNRKEKVIVVGDYGHVYSDLDKRSLRVSDIVMGNILVKEGEFKDFFKVIFP 219
Query: 173 LDTEGWIKK 181
G+I K
Sbjct: 220 DGRRGYIDK 228
>gi|238897535|ref|YP_002923214.1| hypothetical protein HDEF_0303 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465292|gb|ACQ67066.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 207
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q LAI + A + E+E R+++ GPG Y ++
Sbjct: 1 MQKRHCIYLAILSLPISLSAQAAEEE--------RYIS-DNLTTYVHSGPGDEYRILGV- 50
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRS 120
L G PV ++ + + QIRD G + W+ LS S
Sbjct: 51 LKAGEPVTLLDVHTTTQYAQIRDKKGRVVWLPAKQLSQVPS 91
>gi|324329185|gb|ADY24445.1| hypothetical protein YBT020_26115 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 287
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|289422308|ref|ZP_06424158.1| peptidase, C40 family [Peptostreptococcus anaerobius 653-L]
gi|289157253|gb|EFD05868.1| peptidase, C40 family [Peptostreptococcus anaerobius 653-L]
Length = 399
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G GI V+ T L VE++ E W ++R +GTIG++ ++ + + +
Sbjct: 187 NVRSGAGINNKVIST-LNNNDDVEILGEESGWYKVRLSNGTIGYVGAGYIAKTQGNVTNN 245
Query: 126 WN---RKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRE 162
+ D S + G + I +
Sbjct: 246 SQGNLTNNSQRDNSQTDAVADKNKSGLTPTKASGAVAKIAQ 286
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
+P ++ INL ++P S V+K++ G +TI+E W D + GW+
Sbjct: 52 TPEQKQAQTSTSINLREQPSATSNKVSKLQAGSKVTIKESQNGWANIQTEDGQCGWV 108
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 44/172 (25%), Gaps = 54/172 (31%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
++ N R P V L G V + + W I+ DG GW++ ++ +
Sbjct: 60 TSTSINLREQPSATSNKVSK-LQAGSKVTIKESQNGWANIQTEDGQCGWVSGYYVTDENG 118
Query: 121 AIVSPWNRKTNNPIY--------------------------------------------- 135
P NP+
Sbjct: 119 KSAVPAVNTKVNPVAQNNNNLNKKTFKNKNITNIKNNSENVQVENQKTSPSSNASSSAMG 178
Query: 136 -------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+N+ I + +++ + + I W + T G++
Sbjct: 179 RVNSSVGLNVRSGAGINNKVISTLNNNDDVEILGEESGWYKVRLSNGTIGYV 230
>gi|206976951|ref|ZP_03237853.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217962725|ref|YP_002341301.1| hypothetical protein BCAH187_A5412 [Bacillus cereus AH187]
gi|206744917|gb|EDZ56322.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217064721|gb|ACJ78971.1| conserved domain protein [Bacillus cereus AH187]
Length = 290
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|47569735|ref|ZP_00240408.1| enterotoxin / cell-wall binding protein [Bacillus cereus G9241]
gi|47553586|gb|EAL11964.1| enterotoxin / cell-wall binding protein [Bacillus cereus G9241]
Length = 290
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|206576237|ref|YP_002236535.1| SH3 domain protein [Klebsiella pneumoniae 342]
gi|288933519|ref|YP_003437578.1| SH3 type 3 domain protein [Klebsiella variicola At-22]
gi|290511422|ref|ZP_06550791.1| SH3 domain-containing protein [Klebsiella sp. 1_1_55]
gi|206565295|gb|ACI07071.1| SH3 domain protein [Klebsiella pneumoniae 342]
gi|288888248|gb|ADC56566.1| SH3 type 3 domain protein [Klebsiella variicola At-22]
gi|289776415|gb|EFD84414.1| SH3 domain-containing protein [Klebsiella sp. 1_1_55]
Length = 206
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLP 87
L + + L+ + EK R+V+ N R GPG Y +V T + G
Sbjct: 4 LRLITFTLLALSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-INAGEE 55
Query: 88 VEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V V++ ++ + Q+RD +G WI LS + S + + +
Sbjct: 56 VSVLQTNDSTSYAQVRDSNGRTAWIPLKELSNEPSLRTRVPDLENQVKTLTD 107
>gi|227431682|ref|ZP_03913713.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352555|gb|EEJ42750.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 294
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 13/122 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I T++I + ++ KE P + R GPG Y + L G
Sbjct: 20 IIITVSILITVVGLIISLVSKEEIITHP---------NNVQFRNGPGRQYKSL-ASLKSG 69
Query: 86 LPVEVVKEYENWRQIRDFDGTI-GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ V+ + +W Q+R D GW+ + + + + + + D
Sbjct: 70 TRLIVIDKKHSWWQVRRSDNEKVGWVASWV--ANSTILKTAKPISEATIVLDPGHGGSDT 127
Query: 145 QS 146
+
Sbjct: 128 GA 129
>gi|222098700|ref|YP_002532758.1| hypothetical protein BCQ_5069 [Bacillus cereus Q1]
gi|221242759|gb|ACM15469.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 290
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|239832390|ref|ZP_04680719.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239824657|gb|EEQ96225.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 190
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV +T+ C+ WC GW I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGVTVGGCTSGYGWCQVSYGGMTGWAASSYI 81
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
I S N R GPG Y + + G+ V V W Q+ + G GW S ++
Sbjct: 26 IVTSTVNLRTGPGTQYGTIGA-IPNGVGVTVGGCTSGYGWCQVS-YGGMTGWAASSYIA 82
>gi|228965602|ref|ZP_04126683.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228794010|gb|EEM41532.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G WI
Sbjct: 117 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIYNDPSYIRY 171
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 172 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNV 231
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 232 GGNQ---WVSGEYV 242
>gi|228899775|ref|ZP_04064022.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228859889|gb|EEN04302.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|228912403|ref|ZP_04076093.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228847258|gb|EEM92222.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT W+
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWVYY 527
>gi|228921890|ref|ZP_04085202.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229182007|ref|ZP_04309303.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228601422|gb|EEK58947.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228837722|gb|EEM83051.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|206972936|ref|ZP_03233858.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
gi|206731820|gb|EDZ49020.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|229080366|ref|ZP_04212890.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228702928|gb|EEL55390.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|229192933|ref|ZP_04319890.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228590543|gb|EEK48405.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|75762912|ref|ZP_00742720.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489600|gb|EAO53008.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 515
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 463 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 505
>gi|315302592|ref|ZP_07873405.1| beta-N-acetylglucosaminidase [Listeria ivanovii FSL F6-596]
gi|313629037|gb|EFR97357.1| beta-N-acetylglucosaminidase [Listeria ivanovii FSL F6-596]
Length = 532
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 10/126 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN---WRQIRDFDGTIGWINKSLLSGKRSA 121
N R G +V + K + V + W +I +G G++ +S L+ +
Sbjct: 25 VNLRAGRSFDTAIV-ESIPKNQQMYVEDNSRDSSGWVKIISQNGVAGYMRESYLT---TY 80
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGW 178
+ + +N+ KPD S + + + + S W G+
Sbjct: 81 DPTKTYFENYAISALNIRSKPDYSSETIVVAPTNAKVYVEQNSLDANGWLKVAYNGRVGY 140
Query: 179 IKKQKI 184
+K I
Sbjct: 141 MKAAYI 146
>gi|170721550|ref|YP_001749238.1| SH3 type 3 domain-containing protein [Pseudomonas putida W619]
gi|169759553|gb|ACA72869.1| SH3 type 3 domain protein [Pseudomonas putida W619]
Length = 222
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP----RFVTIKASRANSRIGPGIM 74
+ S +LA+ ++A P R+V+ + R GP
Sbjct: 4 RPNMPESRPASLALPALRGSLIAALVALAAPVHAQEPASDARWVS-DSLSTYVRSGPTDG 62
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ +V T L G + ++ N+ Q+R +G + WI S L
Sbjct: 63 HRIVGT-LKSGQKLTLIGSQGNYSQVRGQNGDLVWILSSDL 102
>gi|13473692|ref|NP_105260.1| hypothetical protein mlr4377 [Mesorhizobium loti MAFF303099]
gi|14024443|dbj|BAB51046.1| mlr4377 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQK 183
+ + +N+ P Q ++ + G T+ C + +WC +GW+
Sbjct: 10 ADTAVSAVTDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENSKWCTIAEAGGQGWVYSDY 69
Query: 184 I 184
+
Sbjct: 70 V 70
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL----SGKR 119
N R GPG Y V+ L G + EN W I + G GW+ + SG R
Sbjct: 21 NVRAGPGPQYPVIGV-LAAGQSATLNGCIENSKWCTIAEAGGQ-GWVYSDYVTADFSGSR 78
Query: 120 SAIV 123
+
Sbjct: 79 VILT 82
>gi|311695117|gb|ADP97990.1| SH3, type 3 domain protein [marine bacterium HP15]
Length = 214
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-QIRDFDGTIGWINKSLLSGKRSA 121
R G G + ++ + G P+EV++ ++ +R GT GW++ LS A
Sbjct: 26 VRSGAGSQFRIIENAVPSGTPLEVIEASDSGYTLVRTPKGTEGWVSSQYLSETPIA 81
>gi|221196690|ref|ZP_03569737.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2M]
gi|221203359|ref|ZP_03576378.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2]
gi|221177293|gb|EEE09721.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2]
gi|221183244|gb|EEE15644.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2M]
Length = 278
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 VAHAQGDAYTNAPAELFAGPAPDYPVVAELPPGTALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|126724335|ref|ZP_01740178.1| hypothetical protein RB2150_10906 [Rhodobacterales bacterium
HTCC2150]
gi|126705499|gb|EBA04589.1| hypothetical protein RB2150_10906 [Rhodobacterales bacterium
HTCC2150]
Length = 196
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
I E+ LP + + +R N R GP V+ + V W +IR + +
Sbjct: 125 IIEEAALP-MMQVSGNRVNVRSGPSTQNPVIGRLVKNDSAELVEAMDNGWSKIRFGESSR 183
Query: 108 -GWINKSLLSGKR 119
G++ L+
Sbjct: 184 IGFMASKFLTATP 196
>gi|266622972|ref|ZP_06115907.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
gi|288865265|gb|EFC97563.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
Length = 350
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
V + N R P +V + V+ W +IR G+++ L+
Sbjct: 86 VAMVEDSLNIRKEPKNDAEIVGK-MESHAGCSVLGMEHGWYKIR-SGQVTGYVSGKYLAV 143
Query: 117 ---GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYN 172
+ SA N + + PD S I+ ++ G + G W
Sbjct: 144 GQAARASAYCDMKLMLRVNTDTLRVRSAPDTDSEILGRIHEGETYDYLSRAGGGWIKIRY 203
Query: 173 LDTEGWI 179
+ EG+
Sbjct: 204 GEQEGYA 210
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 21/52 (40%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K+P + IV K+E ++ W + G++ + +
Sbjct: 90 EDSLNIRKEPKNDAEIVGKMESHAGCSVLGMEHGWYKIRSGQVTGYVSGKYL 141
>gi|323694935|ref|ZP_08109085.1| bacteriocin family protein [Clostridium symbiosum WAL-14673]
gi|323501025|gb|EGB16937.1| bacteriocin family protein [Clostridium symbiosum WAL-14673]
Length = 392
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT N R G G+ T L G VEV+ W ++ + G+++ L+
Sbjct: 119 VTTCGGNLNVRTGAGLDND-AFTQLPDGAQVEVIGTEGEWVKVLLPE-REGYVHSDYLTI 176
Query: 118 KRSAIVSPWNRKTNNPIYINLYKK 141
+ S +T+ + L+
Sbjct: 177 TDTGSFSLSLDETDLSALMELFAS 200
>gi|325168772|ref|YP_004280562.1| hypothetical protein AGROH133_14972 [Agrobacterium sp. H13-3]
gi|325064495|gb|ADY68184.1| hypothetical protein AGROH133_14972 [Agrobacterium sp. H13-3]
Length = 150
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLS 116
+ A+ N R GP Y + L +GLP++VV W + GW++ + ++
Sbjct: 26 SYAAAEINMRAGPSTHYPSMGI-LPEGLPLKVVGCTKGNRWCDVE-ASRRRGWVSGAYIT 83
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ + IN+ P + + G+ L + C+ WC GW+
Sbjct: 20 TTALAGSYAAAEINMRAGPSTHYPSMGILPEGLPLKVVGCTKGNRWCDVEASRRRGWVSG 79
Query: 182 QKI 184
I
Sbjct: 80 AYI 82
>gi|229104273|ref|ZP_04234943.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228679140|gb|EEL33347.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 309
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R G ++ + L + W Q D++G + +++ L+G+
Sbjct: 87 VTANVLNVRAGANTDSEILGKFNKNDLIETTNQVQNEWLQF-DYNGKVAYVHVPFLTGEA 145
Query: 120 SAIVSPWNRKTNNPIYIN 137
I P +N
Sbjct: 146 PVIEKKEVVTQEEPARVN 163
>gi|229073807|ref|ZP_04206901.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|228709301|gb|EEL61381.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 485 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 527
>gi|154482466|ref|ZP_02024914.1| hypothetical protein EUBVEN_00133 [Eubacterium ventriosum ATCC
27560]
gi|149736667|gb|EDM52553.1| hypothetical protein EUBVEN_00133 [Eubacterium ventriosum ATCC
27560]
Length = 156
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ +NL K +S ++ ++ G + + +G+WC G++ K+
Sbjct: 88 TTTAEEYMYTTDVLNLRKSASAKSKLITQIGAGKKVQVISENGKWCQIKYGKDTGYVMKK 147
Query: 183 KI 184
+
Sbjct: 148 YL 149
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R ++ T + G V+V+ E W QI+ + G++ K LS
Sbjct: 96 YTTDVLNLRKSASAKSKLI-TQIGAGKKVQVISENGKWCQIK-YGKDTGYVMKKYLS 150
>gi|125975429|ref|YP_001039339.1| Allergen V5/Tpx-1 related [Clostridium thermocellum ATCC 27405]
gi|256005275|ref|ZP_05430241.1| SCP-like extracellular protein [Clostridium thermocellum DSM 2360]
gi|281419390|ref|ZP_06250405.1| SCP-like extracellular protein [Clostridium thermocellum JW20]
gi|125715654|gb|ABN54146.1| Allergen V5/Tpx-1 related protein [Clostridium thermocellum ATCC
27405]
gi|255990711|gb|EEU00827.1| SCP-like extracellular protein [Clostridium thermocellum DSM 2360]
gi|281407010|gb|EFB37273.1| SCP-like extracellular protein [Clostridium thermocellum JW20]
gi|316939554|gb|ADU73588.1| SCP-like extracellular [Clostridium thermocellum DSM 1313]
Length = 280
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVT--IKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
L + F++ FVT + A N R GP + VVC L KG V V
Sbjct: 19 TGLLGLSFQNASAATSFQRVN---FVTGVVTADSLNVRQGPSTKFPVVCV-LKKGQTVNV 74
Query: 91 VKEYENWRQI 100
+ +W I
Sbjct: 75 FGKLGDWYAI 84
>gi|313835032|gb|EFS72746.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA2]
Length = 234
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 20/98 (20%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIY-------------------INLYKKPDIQSIIV 149
W ++ L+GK A+ K P +N++ P + I+
Sbjct: 1 WAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSAPIHTTTGVNVHTAPSPNARII 60
Query: 150 AKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ G + E G W GW + + G
Sbjct: 61 TALTQGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTG 98
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK- 118
+ N P ++ T LT+G V E + NW QIR DG GW ++ L+GK
Sbjct: 43 TTTGVNVHTAPSPNARII-TALTQGTGVHATGEVHGNWVQIR-ADGHTGWAYRTYLTGKV 100
Query: 119 -RSAIVSPWNRKTNNPIYINLYKKP 142
+ + +P K +P
Sbjct: 101 PATKVDTPSRNKHKGSDTSRDQARP 125
>gi|89889632|ref|ZP_01201143.1| putative peptidase [Flavobacteria bacterium BBFL7]
gi|89517905|gb|EAS20561.1| putative peptidase [Flavobacteria bacterium BBFL7]
Length = 372
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
AN R P ++ T PV ++ NW +R G G+++KS+L
Sbjct: 321 ANLRTEPSSSSDILQDVKTA--PVSIIGNTGNWYHVRTTTGLSGYMHKSVL 369
>gi|296158393|ref|ZP_06841224.1| SH3 type 3 domain protein [Burkholderia sp. Ch1-1]
gi|295891337|gb|EFG71124.1| SH3 type 3 domain protein [Burkholderia sp. Ch1-1]
Length = 240
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQK 183
+ +N+ P IV ++ GV +T+ C + +WC D GW+ +
Sbjct: 24 AQSQAYTNGTVNVRAGPASDYPIVTQLPGGVPVTVMGCISNYQWCDVAAPDLRGWVYAGR 83
Query: 184 I 184
+
Sbjct: 84 L 84
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 32/101 (31%), Gaps = 18/101 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + L L + A A S N R GP Y +
Sbjct: 1 MKQRLVRCLCAVAGVLALPAAACAQSQA--------------YTNGTVNVRAGPASDYPI 46
Query: 78 VCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS 116
V T L G+PV V+ N W + D GW+ LS
Sbjct: 47 V-TQLPGGVPVTVMGCISNYQWCDVAAPD-LRGWVYAGRLS 85
>gi|260467298|ref|ZP_05813472.1| protein of unknown function DUF1236 [Mesorhizobium opportunistum
WSM2075]
gi|259028902|gb|EEW30204.1| protein of unknown function DUF1236 [Mesorhizobium opportunistum
WSM2075]
Length = 200
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 110 INKSLLSGKRSAIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SG 165
+ ++G + + + + + +N+ P Q ++ + G T+ C +
Sbjct: 4 VLFPAVAGMLTVMSGSALADTAVSAVTDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENS 63
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+WC +GW+ +
Sbjct: 64 KWCTIAEAGGQGWVYSDYV 82
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WR 98
A++ + L + N R GPG Y V+ L G + EN W
Sbjct: 8 AVAGMLTVMSGSALADTAVSAVTDLNVRAGPGPQYPVIGV-LAAGQSATLNGCIENSKWC 66
Query: 99 QIRDFDGTIGWINKSLLSG 117
I + G GW+ ++
Sbjct: 67 TIAEAGGQ-GWVYSDYVTA 84
>gi|221212714|ref|ZP_03585691.1| SH3, type 3 domain protein [Burkholderia multivorans CGD1]
gi|221167813|gb|EEE00283.1| SH3, type 3 domain protein [Burkholderia multivorans CGD1]
Length = 282
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 VAHAQGDAYTNAPAELFAGPAPDYPVVAELPPGTALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|218235161|ref|YP_002367916.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
gi|218163118|gb|ACK63110.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
Length = 533
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 481 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 523
>gi|228901217|ref|ZP_04065416.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis IBL 4222]
gi|228858428|gb|EEN02889.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis IBL 4222]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I S N R GPG Y V+ L KG +V + W + G WI
Sbjct: 117 INGSNVNLRKGPGTGYGVI-RQLGKGESYKVFGQSNGWLNL----GGDQWIYNDPSYIRY 171
Query: 115 LSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N + + P IV V G W
Sbjct: 172 TGGNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNV 231
Query: 171 YNLDTEGWIKKQKI 184
W+ + +
Sbjct: 232 GGNQ---WVSGEYV 242
>gi|52550789|gb|AAU84440.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSA--IVSPWNRKTNNP 133
K ++ +V +K P
Sbjct: 142 KATSTPVVKQEVKKETTP 159
>gi|330986443|gb|EGH84546.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 224
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ +L R P + S A F A +A+ + R+V+ +
Sbjct: 3 RHFSALLSRA--PGLFAVSRRLLGAGLFGAALTVAVPGNAQAAGSD---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 57 VRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|291538572|emb|CBL11683.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis XB6B4]
Length = 403
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 6/124 (4%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V L E++ +W QI G++ L +AI
Sbjct: 140 INVREVPGTEAEIVGK-LPNNAGCEIIGTDGDWTQIE-SGKVKGYVKSEYLMTGEAAIAK 197
Query: 125 PWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
K T + + + + S ++ + G L + E W EG++
Sbjct: 198 AQEVKQTVATVTTTTLYVRDEANTDSHVITMMPEGEELEVLEVLDGWVKINVDSDEGYVS 257
Query: 181 KQKI 184
+
Sbjct: 258 SDYV 261
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 134 AQADGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 188
>gi|256544542|ref|ZP_05471915.1| LysM domain protein [Anaerococcus vaginalis ATCC 51170]
gi|256399867|gb|EEU13471.1| LysM domain protein [Anaerococcus vaginalis ATCC 51170]
Length = 274
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 19/164 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+ + + L + + KA N R ++
Sbjct: 4 LKKYALAAAIVLPTLFTASNKAEASSAVKDAN-------KADAVNVRSDASESNNIIGL- 55
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+T EV+ + W +I+ F+G ++ + +A + N K
Sbjct: 56 ITDDKSYEVLGSTDGWLKIK-FNGKEAYVGGQWFNITETAKILS---------PANFRKS 105
Query: 142 PDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
++ S + ++ + ++ + + EG+I +
Sbjct: 106 DNLNSEVYQVLKKDSSVEVKSAANNGFVKVVFEGKEGYIHNSLL 149
>gi|228909024|ref|ZP_04072853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228850532|gb|EEM95357.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 533
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 481 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 523
>gi|152993604|ref|YP_001359325.1| hypothetical protein SUN_2026 [Sulfurovum sp. NBC37-1]
gi|151425465|dbj|BAF72968.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 220
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 16/96 (16%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNR-----------KTNNPIYINLYKKPDIQSII 148
+RDF GW+NK L I SP + + +N+ + P S
Sbjct: 83 VRDFPRNGGWVNKKYLKPASDIIYSPAIQYRKNQNIFKVVGVRSDDNLNVREHPRNSSKK 142
Query: 149 VAKVEPGVLLTI-RECS----GEWCFGYNLDTEGWI 179
V ++ + + +C WC+ T GW
Sbjct: 143 VGHLKYNDVGIVAAKCQKIGKSSWCYVAYDFTMGWA 178
>gi|152977442|ref|YP_001376959.1| 3D domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026194|gb|ABS23964.1| 3D domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 284
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 13/122 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P VV L G ++V+ W QI+ F+G +++
Sbjct: 28 VTTDVLNVRENPTTESKVVGKVLN-GHKLDVINTENGWSQIK-FNGKDVFVSAEFTKSIY 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGW 178
+N+ + + S I+ ++ + T + W +
Sbjct: 86 YV----------TANVLNVRAEANTNSEILGTLKKDDKIETTNQVQNGWLQFEYNGKTAY 135
Query: 179 IK 180
+
Sbjct: 136 VH 137
>gi|237799186|ref|ZP_04587647.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022041|gb|EGI02098.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 131
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ L +L R P + S A F + + + + R+V+ +
Sbjct: 3 RHLPALLSRA--PGLFSVSRRLLGAGLFGAVLTVIVPGNAQAAGNE---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 57 VRSGPTDDHRIVGT-LKSGQKVELLSNSGKFSQVRGEGGSTVWIPSSDL 104
>gi|116873428|ref|YP_850209.1| NlpC/P60 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742306|emb|CAK21430.1| NlpC/P60 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 763
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 10/124 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
+ N R + + +G V+V + NW ++ +D G++ + L
Sbjct: 566 YAVNTLNLRSEAKWDSSTS-QVVPEGAKVKVEMDTNNGNWFKVT-YDNKTGYMPLNDLYL 623
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ ++ + K N +NL + S I V+ G V + ++ W
Sbjct: 624 SDTVVLKTYYAKDN----LNLRSEAKWDSKISLIVQKGEKVTVNLKTSVNGWYQVTYGGK 679
Query: 176 EGWI 179
G++
Sbjct: 680 TGYM 683
Score = 42.3 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 9/125 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R V + KG V V + W Q+ + G G++ +L+
Sbjct: 228 YAKDNLNLRTKATWDSEVA-QKVQKGEKVTVNLKTSVNGWYQVT-YGGKTGYM---ILNN 282
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ +NL + S I V G V + + SG W +
Sbjct: 283 NYLVENPLDMQTYYAVGTLNLRSEAKWDSSINLVVPEGQAVKVEMNTNSGSWYKVTYQNQ 342
Query: 176 EGWIK 180
G+I
Sbjct: 343 TGYIP 347
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 9/125 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R + + KG V V + W Q+ + G G++ LL+
Sbjct: 633 YAKDNLNLRSEAKWDSKISLI-VQKGEKVTVNLKTSVNGWYQVT-YGGKTGYM---LLND 687
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ +NL + S I V G V + + +G W +
Sbjct: 688 NYLVDQPLNMKTYYAVNALNLRNEAKWDSDINQIVPAGAAVKVEMDTNNGVWYKVTYQNK 747
Query: 176 EGWIK 180
G++
Sbjct: 748 TGYMP 752
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R V+ + KG V V + W Q+ ++G G++ +L+
Sbjct: 363 YAKDNLNLRSETKWDSDVI-QKVQKGEKVTVNLKTSVNGWYQLT-YNGKKGYM---ILND 417
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDT 175
+ + +NL S I V G V + + G W +
Sbjct: 418 NYLVEKALNMKTYYAVSNLNLRSGAKWDSDISQVVPEGKAVKVEMDTNEGSWFKVTYDNK 477
Query: 176 EGWIKKQKIW 185
G++ ++
Sbjct: 478 TGYMPLSDLY 487
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 40/131 (30%), Gaps = 11/131 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSG 117
N R + + KG V + + W ++ + G++ +L+
Sbjct: 498 YAKDNLNLRSEAKWDSEIS-QIVEKGEKVTINSKTSINGWYEVT-YGSKKGYM---VLNE 552
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKP---DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ +NL + S +V + V + + +G W +
Sbjct: 553 NYLVDQPLNLKNYYAVNTLNLRSEAKWDSSTSQVVPEGAK-VKVEMDTNNGNWFKVTYDN 611
Query: 175 TEGWIKKQKIW 185
G++ ++
Sbjct: 612 KTGYMPLNDLY 622
>gi|241765634|ref|ZP_04763588.1| SH3 type 3 domain protein [Acidovorax delafieldii 2AN]
gi|241364542|gb|EER59614.1| SH3 type 3 domain protein [Acidovorax delafieldii 2AN]
Length = 174
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 19/51 (37%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L P + + ++ G L G W + + EGW+++ +
Sbjct: 34 TATELRANPALDAKAQGRLARGARLEQTGSQGGWLKVKSGNQEGWVRQTHV 84
>gi|229192100|ref|ZP_04319069.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228591426|gb|EEK49276.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 310
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 39/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I+ + N R GPG Y V+ L KG EV + W + G WI
Sbjct: 181 IEGNGVNLRKGPGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGDQWIYNDPSYIRY 235
Query: 115 LSGKRSAIVSPWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G+ P N T + + P +V V W
Sbjct: 236 TGGEAPTPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYRDGWYNV 295
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 296 ---GGDQWVSGEYV 306
>gi|163943203|ref|YP_001642433.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865400|gb|ABY46458.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
weihenstephanensis KBAB4]
Length = 533
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 481 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTGQWIYY 523
>gi|331269959|ref|YP_004396451.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
BKT015925]
gi|329126509|gb|AEB76454.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
BKT015925]
Length = 253
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSL 114
R+ + AS N R GPG Y V+ L KG V++ K+ N W I F G++ K+
Sbjct: 192 RYGLVTASVLNVRSGPGTDYRVIGQ-LNKGTKVKIYKDKGNGWYDIY-FGNHGGYVYKNY 249
Query: 115 L 115
+
Sbjct: 250 I 250
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P ++ ++ G + I ++ W Y + G++ K I
Sbjct: 197 TASVLNVRSGPGTDYRVIGQLNKGTKVKIYKDKGNGWYDIYFGNHGGYVYKNYI 250
>gi|238762458|ref|ZP_04623429.1| hypothetical protein ykris0001_27040 [Yersinia kristensenii ATCC
33638]
gi|238699443|gb|EEP92189.1| hypothetical protein ykris0001_27040 [Yersinia kristensenii ATCC
33638]
Length = 206
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + LA+ + A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLAVLSLSISLGAYAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ + N+ QIRD G WI LS S V + + +
Sbjct: 50 LKGGDEVTLISVNDSTNYGQIRDSKGKTTWIPLDQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|262195144|ref|YP_003266353.1| hypothetical protein Hoch_1913 [Haliangium ochraceum DSM 14365]
gi|262078491|gb|ACY14460.1| protein of unknown function DUF1058 [Haliangium ochraceum DSM
14365]
Length = 523
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K +L PD S VA+++ L++ E G W GWI++ +
Sbjct: 26 KVWTKSETSLRADPDDASSRVARIQGDRELSVIEKKGNWYRVKVGVKTGWIRRSDL 81
>gi|126653843|ref|ZP_01725703.1| S-layer protein [Bacillus sp. B14905]
gi|126589631|gb|EAZ83769.1| S-layer protein [Bacillus sp. B14905]
Length = 465
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 19/139 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N + P V+ T + + + V K + + +G G++ + S +
Sbjct: 295 TKNAVNLYVKPTSSAKVIST-IKANVKLPVYKTVGGYYLTQ-VNGLPGYVVAN--STTDT 350
Query: 121 A---------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ S +N+ + + S ++ K+ G + + SG
Sbjct: 351 VEEEKPNPNPDPGTPPVTSGDVLGRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNSISG 410
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 411 YWAEITYNGQTGYVHKSYL 429
>gi|152971976|ref|YP_001337085.1| putative signal transduction protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896555|ref|YP_002921296.1| putative signal transduction protein [Klebsiella pneumoniae
NTUH-K2044]
gi|262042282|ref|ZP_06015447.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330003940|ref|ZP_08304787.1| SH3 domain protein [Klebsiella sp. MS 92-3]
gi|150956825|gb|ABR78855.1| hypothetical protein KPN_03459 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548878|dbj|BAH65229.1| hypothetical protein KP1_4746 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040346|gb|EEW41452.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536783|gb|EGF63098.1| SH3 domain protein [Klebsiella sp. MS 92-3]
Length = 206
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLP 87
L + + L+ + EK R+V+ N R GPG Y +V T + G
Sbjct: 4 LRLITFTLLALSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-INAGEE 55
Query: 88 VEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V V++ ++ + QIRD +G WI LS + S + + +
Sbjct: 56 VSVLQTNDSTSYAQIRDSNGRTAWIPLKELSNEPSLRTRVPDLENQVKTLTD 107
>gi|257126578|ref|YP_003164692.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050517|gb|ACV39701.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 171
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 26/69 (37%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S ++ + + +++ +P S ++A + G + G+W +
Sbjct: 101 SQSSEPVIFYIDGSGDEDGIVSVRLEPKEGSELIADLSNGEPVEYLGRKGDWYYVKYDGG 160
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 161 TGYVPKSGL 169
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASR---ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
P + EK +P+ ++ + R+ P ++ L+ G PVE +
Sbjct: 91 PKKTQNTEKNSQSSEPVIFYIDGSGDEDGIVSVRLEPKEGSELI-ADLSNGEPVEYLGRK 149
Query: 95 ENWRQIRDFDGTIGWINKSLL 115
+W ++ +DG G++ KS L
Sbjct: 150 GDWYYVK-YDGGTGYVPKSGL 169
>gi|90424230|ref|YP_532600.1| SH3-like region [Rhodopseudomonas palustris BisB18]
gi|90106244|gb|ABD88281.1| SH3-like region [Rhodopseudomonas palustris BisB18]
Length = 184
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
R + +N+ P + V ++ G LTI C WC GW+
Sbjct: 24 AATRDGYSGANLNIRSGPSTRFPAVRRLAAGSALTIHGCVANYKWCDVSASGVRGWVSGA 83
Query: 183 KI 184
+
Sbjct: 84 HV 85
>gi|217388353|ref|YP_002333382.1| hypothetical protein pMG2200_21 [Enterococcus faecalis]
gi|227517485|ref|ZP_03947534.1| bacteriocin family protein [Enterococcus faecalis TX0104]
gi|260559899|ref|ZP_05832078.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|8100666|gb|AAF72350.1|AF192329_11 bacteriocin-like protein [Enterococcus faecalis]
gi|216409895|dbj|BAH02330.1| hypothetical protein [Enterococcus faecalis]
gi|227075090|gb|EEI13053.1| bacteriocin family protein [Enterococcus faecalis TX0104]
gi|260074123|gb|EEW62446.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 409
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT R N R G G+ T L G VEVV +W +I + IG+++ ++
Sbjct: 121 VTTNGGRLNVRTGAGLD-KTAFTQLPNGTTVEVVGTDGDWIKILLPE-RIGYVHSDYMT- 177
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
VS +L P+ + ++ G
Sbjct: 178 -----VSEKEVAATGEGGFSLSIDPEEIASLLELFNGG 210
>gi|217972095|ref|YP_002356846.1| SH3 type 3 domain-containing protein [Shewanella baltica OS223]
gi|217497230|gb|ACK45423.1| SH3 type 3 domain protein [Shewanella baltica OS223]
Length = 192
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSA 121
GPG + +V + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 37 GPGTEFRIVGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSF 88
>gi|152999417|ref|YP_001365098.1| SH3 type 3 domain-containing protein [Shewanella baltica OS185]
gi|151364035|gb|ABS07035.1| SH3 type 3 domain protein [Shewanella baltica OS185]
Length = 182
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSA 121
GPG + +V + + G PV ++ E ++ +I D G GW+ +L+S +S
Sbjct: 27 GPGTEFRIVGS-IEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSF 78
>gi|51597708|ref|YP_071899.1| signal transduction protein [Yersinia pseudotuberculosis IP 32953]
gi|153947558|ref|YP_001399554.1| signal transduction protein [Yersinia pseudotuberculosis IP 31758]
gi|170022893|ref|YP_001719398.1| putative signal transduction protein [Yersinia pseudotuberculosis
YPIII]
gi|186896851|ref|YP_001873963.1| putative signal transduction protein [Yersinia pseudotuberculosis
PB1/+]
gi|51590990|emb|CAH22648.1| Conserved hypothetical membrane protein [Yersinia
pseudotuberculosis IP 32953]
gi|152959053|gb|ABS46514.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|169749427|gb|ACA66945.1| SH3 domain protein [Yersinia pseudotuberculosis YPIII]
gi|186699877|gb|ACC90506.1| SH3 domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 206
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + L I A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLTILSLSLSWGAQAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ N+ QIRD G WI + LS S V + + +
Sbjct: 50 LKGGDEVTLISVDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|114764435|ref|ZP_01443661.1| hypothetical protein 1100011001309_R2601_01878 [Pelagibaca
bermudensis HTCC2601]
gi|114543189|gb|EAU46207.1| hypothetical protein R2601_01878 [Roseovarius sp. HTCC2601]
Length = 288
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 23/118 (19%)
Query: 18 MPKILQNSLI---FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA----SRANSRIG 70
+P+ L+ ++ F LA F + P A + P + + N R G
Sbjct: 8 IPQRLKAAIAGTAFALAACFAVLPGAAQAQMG--------PDYWQVTGVASDDHLNIRTG 59
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDG-TIGWINKSLL--SGKRSA 121
PG VV G + W I DG T GW+ L SG +
Sbjct: 60 PGTSNRVV-ALAPNGAVFRNLGCRGEGNGRWCHIETPDGSTSGWVAGRFLQESGAPTH 116
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD--TEGWI 179
+ ++N+ P + +VA G + C GE WC D T GW+
Sbjct: 44 QVTGVASDDHLNIRTGPGTSNRVVALAPNGAVFRNLGCRGEGNGRWCHIETPDGSTSGWV 103
Query: 180 KKQKI 184
+ +
Sbjct: 104 AGRFL 108
>gi|269839751|ref|YP_003324444.1| nuclease (SNase domain protein) [Thermobaculum terrenum ATCC
BAA-798]
gi|269791481|gb|ACZ43621.1| nuclease (SNase domain protein) [Thermobaculum terrenum ATCC
BAA-798]
Length = 383
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 28/141 (19%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEY------ENWRQIRDFDGTIGWINKSLLSG- 117
AN R+ P ++ + G V V+ + W ++R + GWI LL
Sbjct: 245 ANLRLEPTTRSKLLML-IPNGEAVSVLSNKIPGPDGDRWYKVR-YGNLKGWIRSDLLVRD 302
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV--------AKVEPGVLLTIREC 163
R +V + NL KP +Q+ ++ P +L I
Sbjct: 303 VPGGPPSRRMLVDASPQGYAG---ANLRAKPSMQAPVITLIPNRKLVLASPRTVLGIDG- 358
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W GW++ +
Sbjct: 359 -YYWYGVRYGRFTGWVRSDLL 378
>gi|254502470|ref|ZP_05114621.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222438541|gb|EEE45220.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 176
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGW 178
A+ +N+ P ++ + G + I C+ WC + GW
Sbjct: 19 AMSQANASVAYTTSGLNMRAGPGTSYPVITTLPQGAAVQISGCTAGYGWCDASYGNVSGW 78
Query: 179 IKKQKI 184
+ +
Sbjct: 79 VSGSYL 84
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L+ + + + F P ++ ++ V S N R GPG Y V+ T
Sbjct: 1 MLKQAALVMMTAGFLAQPAMSQANAS-----------VAYTTSGLNMRAGPGTSYPVITT 49
Query: 81 YLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
L +G V++ W + GW++ S L
Sbjct: 50 -LPQGAAVQISGCTAGYGWCDAS-YGNVSGWVSGSYL 84
>gi|225375938|ref|ZP_03753159.1| hypothetical protein ROSEINA2194_01575 [Roseburia inulinivorans DSM
16841]
gi|225212191|gb|EEG94545.1| hypothetical protein ROSEINA2194_01575 [Roseburia inulinivorans DSM
16841]
Length = 403
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 10/131 (7%)
Query: 63 SRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSLLSGKR 119
+ N R P V+ Y V E + W +I G++ + +
Sbjct: 100 NYVNVRSEPNTDSEVLGKLYNNSAATVLETTE-DGWYKIT-SGSVTGYVKCEYVVTGDEE 157
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG---VLLTIRECSGEWCFGYNLDTE 176
A T + + +P ++ I+ + G V++ W + +
Sbjct: 158 LAKKVSTRYATVTTTTLYVRMEPSTEAGILTMLGEGDDFVVVDDSMKDSGWVIVTTEEGD 217
Query: 177 GWIKKQ--KIW 185
G++ +W
Sbjct: 218 GYVSTDYVNLW 228
>gi|30265266|ref|NP_847643.1| hypothetical protein BA_5481 [Bacillus anthracis str. Ames]
gi|47530798|ref|YP_022147.1| hypothetical protein GBAA_5481 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188076|ref|YP_031329.1| hypothetical protein BAS5090 [Bacillus anthracis str. Sterne]
gi|165869909|ref|ZP_02214566.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167636526|ref|ZP_02394822.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167641806|ref|ZP_02400047.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170689397|ref|ZP_02880589.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170708978|ref|ZP_02899410.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177654109|ref|ZP_02936119.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190567772|ref|ZP_03020684.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196039533|ref|ZP_03106838.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|196045653|ref|ZP_03112883.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225867210|ref|YP_002752588.1| hypothetical protein BCA_5378 [Bacillus cereus 03BB102]
gi|227818001|ref|YP_002818010.1| hypothetical protein BAMEG_5527 [Bacillus anthracis str. CDC 684]
gi|229602942|ref|YP_002869455.1| hypothetical protein BAA_5508 [Bacillus anthracis str. A0248]
gi|254686338|ref|ZP_05150197.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724334|ref|ZP_05186118.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
A1055]
gi|254737045|ref|ZP_05194750.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Western North America USA6153]
gi|254744372|ref|ZP_05202052.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Kruger B]
gi|254755674|ref|ZP_05207707.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Vollum]
gi|254759594|ref|ZP_05211619.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Australia 94]
gi|301056703|ref|YP_003794914.1| enterotoxin/cell wall-binding protein [Bacillus anthracis CI]
gi|30259944|gb|AAP29129.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47505946|gb|AAT34622.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49182003|gb|AAT57379.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164714232|gb|EDR19752.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167510218|gb|EDR85623.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167528058|gb|EDR90858.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170126143|gb|EDS95038.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170666624|gb|EDT17395.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172080992|gb|EDT66071.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190561188|gb|EDV15161.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196023484|gb|EDX62161.1| conserved domain protein [Bacillus cereus 03BB108]
gi|196029693|gb|EDX68295.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|225787631|gb|ACO27848.1| conserved domain protein [Bacillus cereus 03BB102]
gi|227005569|gb|ACP15312.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229267350|gb|ACQ48987.1| conserved domain protein [Bacillus anthracis str. A0248]
gi|300378872|gb|ADK07776.1| conserved hypothetical enterotoxin/cell wall-binding protein
[Bacillus cereus biovar anthracis str. CI]
Length = 290
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|295089932|emb|CBK76039.1| Bacterial SH3 domain. [Clostridium cf. saccharolyticum K10]
Length = 306
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP S E+ E P R+ T + N R P + + L G VE +++Y
Sbjct: 224 TIAPTEEASTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQ-LAPGTEVEYIEDY 280
Query: 95 EN-WRQIRDFDGTIGWINKSLL 115
++ W +I F+G G+++K L
Sbjct: 281 DDTWVKIT-FEGQEGYVSKEYL 301
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLD 174
S + + + ++ +N+ +P + + ++ PG + I + W
Sbjct: 232 STEENTTEAAPAKRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEG 291
Query: 175 TEGWIKKQKI 184
EG++ K+ +
Sbjct: 292 QEGYVSKEYL 301
>gi|206563112|ref|YP_002233875.1| hypothetical protein BCAM1261 [Burkholderia cenocepacia J2315]
gi|198039152|emb|CAR55116.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 287
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 VADAQSSAYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|218906416|ref|YP_002454250.1| hypothetical protein BCAH820_5330 [Bacillus cereus AH820]
gi|218538793|gb|ACK91191.1| conserved domain protein [Bacillus cereus AH820]
Length = 290
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|134293384|ref|YP_001117120.1| SH3 type 3 domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134136541|gb|ABO57655.1| SH3, type 3 domain protein [Burkholderia vietnamiensis G4]
Length = 274
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
LY P +VA++ PG + + C + WC GWI +++
Sbjct: 26 QSSAYTNSVAALYAGPAPDYPVVAQLPPGTAVEVFGCLSDYSWCDVALPGVRGWIDAEQL 85
>gi|52550793|gb|AAU84442.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVQQEVKKE 156
>gi|29378553|gb|AAO83978.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++ +
Sbjct: 142 KATSTPVVKQEVKKD 156
>gi|196036276|ref|ZP_03103674.1| conserved domain protein [Bacillus cereus W]
gi|195991068|gb|EDX55038.1| conserved domain protein [Bacillus cereus W]
Length = 290
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 52/171 (30%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 96 AEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|29378491|gb|AAO83947.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|228959887|ref|ZP_04121559.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799793|gb|EEM46738.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 267
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 39/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I+ + N R GPG Y V+ L KG EV + W + G WI
Sbjct: 138 IEGNGVNLRKGPGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGNQWIYNDPSYIRY 192
Query: 115 LSGKRSAIVSPWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G A N T + + P +V V G W
Sbjct: 193 TGGDAPAPSKSTNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGKKYQTWGYRDGWYNV 252
Query: 171 YNLDTEGWIKKQKI 184
+ WI + +
Sbjct: 253 ---GGDQWISGEYV 263
>gi|114778755|ref|ZP_01453565.1| hypothetical protein SPV1_02988 [Mariprofundus ferrooxydans PV-1]
gi|114551006|gb|EAU53569.1| hypothetical protein SPV1_02988 [Mariprofundus ferrooxydans PV-1]
Length = 399
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 53/202 (26%), Gaps = 60/202 (29%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ P + EK++ + +T+ R PG VV L +G V +
Sbjct: 202 AVQPAANTAVEKDMQRQL-----LTVDVHLGLIRDAPGSEGKVV-ARLKRGTVVLSLFRQ 255
Query: 95 ENWRQIRDFDGTIGW-------INKS--------LLSGKRSAIVSPWNRKTNNPIYIN-- 137
+W +IR D W I K +SG +A ++
Sbjct: 256 GDWYRIRLPDSREAWGNKVIFAIAKGEPAEKSTGQVSGSGTAAPVTASQPDAAADQAGAN 315
Query: 138 -------------------------------------LYKKPDIQSIIVAKVEPGVLLTI 160
+ P +VA+++ G +
Sbjct: 316 SSETTASSTDTVSATANSEVKRVEQRQVLTVSVHLGIIRDAPGKHGKVVARLKQGTPVIT 375
Query: 161 RECSGEWCFGYNLDTEGWIKKQ 182
GEW E W +
Sbjct: 376 LYRQGEWYRVLLAGHEAWAHQS 397
>gi|16266009|gb|AAL16708.1|AF358672_1 putative N-acetylmuramoyl-L-alanine amidase [Helicobacter
hepaticus]
Length = 106
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ ++ N R P + V+ Y+ G ++++ W ++++ G G+I LL
Sbjct: 5 RYAKYRS---NIRKAPSLESAVIS-YVDVGEVLDILDTQNGWSKVKNARGIEGYIASRLL 60
Query: 116 SGK 118
Sbjct: 61 GES 63
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVFK 194
N+ K P ++S +++ V+ G +L I + W EG+I + + GE FK
Sbjct: 12 NIRKAPSLESAVISYVDVGEVLDILDTQNGWSKVKNARGIEGYIASRLL-----GESFK 65
>gi|226312161|ref|YP_002772055.1| hypothetical protein BBR47_25740 [Brevibacillus brevis NBRC 100599]
gi|226095109|dbj|BAH43551.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 302
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 26/61 (42%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + +N+ KKP + ++ K+ G ++ + E EW D E ++ +
Sbjct: 102 TAGEKARVTGDVLNVRKKPSTDAKVLGKLRSGSIVEVVETGSEWTKIEFEDREAYVATEF 161
Query: 184 I 184
+
Sbjct: 162 L 162
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P V+ L G VEVV+ W +I F+ ++ LS
Sbjct: 109 VTGDVLNVRKKPSTDAKVLGK-LRSGSIVEVVETGSEWTKIE-FEDREAYVATEFLSPNL 166
Query: 120 SAIVS 124
++ VS
Sbjct: 167 TSTVS 171
>gi|229113562|ref|ZP_04243010.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228669861|gb|EEL25256.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 533
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G Y++V +KG V V +E W +I GT WI
Sbjct: 481 VNVRSGSGTNYSIV-RKTSKGEKVTVYEEKNGWLRI----GTDQWIYY 523
>gi|222085437|ref|YP_002543967.1| hypothetical protein Arad_1660 [Agrobacterium radiobacter K84]
gi|221722885|gb|ACM26041.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 355
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V+ ++ ++L DI+S +A G L I +G+W D G++++
Sbjct: 233 VARNGLIQDDQGSVSLKASRDIRSRTIATFANGSGLEIVGRNGDWYQVLIGDKAGYLRRT 292
Query: 183 KIW 185
+W
Sbjct: 293 SVW 295
>gi|328552477|gb|AEB22969.1| YfhK [Bacillus amyloliquefaciens TA208]
gi|328910823|gb|AEB62419.1| hypothetical protein LL3_00876 [Bacillus amyloliquefaciens LL3]
Length = 175
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 15/180 (8%)
Query: 12 LDLRKYMPKILQNS--LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRI 69
++++K + + + +F A + P + + ++ +KA N R
Sbjct: 1 MNMKKGLTAFIPAAGLCLFLAAGTVFFDPAANAAPAHQTKLDTAADTYI-VKAGELNVRK 59
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P +V T ++ V+V + +W +I ++ G +I+ L + V+
Sbjct: 60 EPNKQGVIVGTLRSEDA-VKVKQLEGADWAEI-NYKGQKAYISTHFLMKQPMKAVTAKQT 117
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQKI 184
P +S + A VL G W + G++K +
Sbjct: 118 DFYTPTLET-----GKKSSVKAGETVNVLGWGFSHDGGFDRKWAYVTYGGKAGYVKTADL 172
>gi|29378473|gb|AAO83938.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVQQEVKKE 156
>gi|30250311|ref|NP_842381.1| SH3 domain-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30181106|emb|CAD86298.1| Bacterial SH3 domain homologue [Nitrosomonas europaea ATCC 19718]
Length = 228
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 13/99 (13%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
L ++ F L EK + R GP + +V L
Sbjct: 7 FLAASMFFVFLWGVPLTARAEKSYASDQV----------EVLMRTGPSQQHAIV-RMLKS 55
Query: 85 GLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSA 121
G+ +EV++ +N + ++R GT GW+ L + +A
Sbjct: 56 GVALEVLERDQNKGYSRVRTTGGTEGWVLSRYLMAEPAA 94
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGY-NLDTEGWIKKQKI 184
++ + + + P Q IV ++ GV L + E + + TEGW+ + +
Sbjct: 31 ASDQVEVLMRTGPSQQHAIVRMLKSGVALEVLERDQNKGYSRVRTTGGTEGWVLSRYL 88
>gi|227500622|ref|ZP_03930671.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227217209|gb|EEI82553.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 152
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P S IV + PG + + W G+IK +
Sbjct: 97 EDVVNMRSEPSTDSEIVGEAHPGDEILVLLEKDGWSRVSINGQAGYIKSDLL 148
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R P +V G + V+ E + W ++ +G G+I LL
Sbjct: 98 DVVNMRSEPSTDSEIVGE-AHPGDEILVLLEKDGWSRVS-INGQAGYIKSDLL 148
>gi|223940521|ref|ZP_03632369.1| SH3 type 3 domain protein [bacterium Ellin514]
gi|223890802|gb|EEF57315.1| SH3 type 3 domain protein [bacterium Ellin514]
Length = 409
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 39/137 (28%), Gaps = 22/137 (16%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY----------EN 96
E L + K N R I V+ +L K V V++E
Sbjct: 112 EEAAPLALNQPAVAKQDHVNVRGQANINSEVI-AHLKKDQVVTVLEEITLKHPKTDEPAK 170
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W +I T ++N + L T P +NL P + + G
Sbjct: 171 WAKIALPSDTHVYVNSAFLDN-----------GTVKPAKLNLRTGPGENYSVAGLLHKGD 219
Query: 157 LLTIRECSGEWCFGYNL 173
+ G+W
Sbjct: 220 AVKAVGNKGDWTEIEAP 236
>gi|254472404|ref|ZP_05085804.1| Bacterial SH3 domain superfamily protein [Pseudovibrio sp. JE062]
gi|211958687|gb|EEA93887.1| Bacterial SH3 domain superfamily protein [Pseudovibrio sp. JE062]
Length = 56
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD--GTIGWINK 112
N R GPG Y VV + + +V NW IRD IGW+ K
Sbjct: 3 NLRTGPGTNYNVVGRLI-SNQAINIVDCKGNWLGIRDPQTSEQIGWVYK 50
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE---GWIKKQKI 184
+NL P +V ++ + I +C G W + T GW+ K +
Sbjct: 1 MLNLRTGPGTNYNVVGRLISNQAINIVDCKGNWLGIRDPQTSEQIGWVYKGYM 53
>gi|330880478|gb|EGH14627.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 229
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 6 MSRHFSALLSRAPSLFAVSRRLLGAGLFGAALT-VVVPGNAQAAGSD--------RWVS- 55
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 56 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 109
>gi|229074323|ref|ZP_04207361.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock4-18]
gi|229095098|ref|ZP_04226093.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-29]
gi|229101200|ref|ZP_04231965.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-28]
gi|229114052|ref|ZP_04243477.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock1-3]
gi|228669322|gb|EEL24739.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock1-3]
gi|228682212|gb|EEL36324.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-28]
gi|228688283|gb|EEL42166.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-29]
gi|228708765|gb|EEL60900.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock4-18]
Length = 485
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
R N +N+ K P + V ++ G +TI W EG++
Sbjct: 27 ERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRFNGGEGYV 79
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
+ AS N R GP V +L G V ++ + W +IR F+G G+++ L
Sbjct: 29 AVVNASLLNVRKGPSTGAAAVG-HLKNGETVTIIGKENGWAKIR-FNGGEGYVSLQFLKV 86
Query: 117 --GKRSAIVSPWNRKTNNPIYIN 137
G S + ++K P
Sbjct: 87 KQGSSSYEIVTSSQKVQKPNEAE 109
>gi|34014943|gb|AAQ56225.1| invasion-associated protein p60 [Listeria innocua]
Length = 468
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|188586792|ref|YP_001918337.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351479|gb|ACB85749.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 431
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 58 VTIKASRANSRIGPGIMY-TVVCTYLTKGLPV--EVVKEYEN----WRQIRDFD-GTIGW 109
+ A+ N R GPG+ + + + + PV EV EY+N W +I + +GW
Sbjct: 157 AEVTATTLNVRTGPGLNHAPIHQVHANETYPVLEEVSYEYDNTHHEWMKINLPEHNEVGW 216
Query: 110 INKSLL 115
+++ +
Sbjct: 217 VSRDFV 222
>gi|107026580|ref|YP_624091.1| SH3, type 3 [Burkholderia cenocepacia AU 1054]
gi|116692230|ref|YP_837763.1| SH3 type 3 domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895954|gb|ABF79118.1| SH3, type 3 [Burkholderia cenocepacia AU 1054]
gi|116650230|gb|ABK10870.1| SH3, type 3 domain protein [Burkholderia cenocepacia HI2424]
Length = 312
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 VADAQSSAYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYAWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|29378533|gb|AAO83968.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|49474491|ref|YP_032533.1| hypothetical protein BQ09320 [Bartonella quintana str. Toulouse]
gi|49239995|emb|CAF26409.1| hypothetical protein BQ09320 [Bartonella quintana str. Toulouse]
Length = 110
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P+ Q ++ + G L+ I+ C G WC GW+ + +
Sbjct: 31 LNFRTGPNTQCALLGLIPAGELIIIQSCKGNWCHIRYNAQTGWVSSRYL 79
>gi|307150003|ref|YP_003885387.1| hypothetical protein Cyan7822_0060 [Cyanothece sp. PCC 7822]
gi|306980231|gb|ADN12112.1| hypothetical protein Cyan7822_0060 [Cyanothece sp. PCC 7822]
Length = 172
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 48/158 (30%), Gaps = 19/158 (12%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
L+L +P + V N R+ P V + P+ + W
Sbjct: 18 ALSLFTNITKVAAQPSGQAVVFDPPS-NVRVTPN---GAVLCSVRTVSPINIYGSQNGWY 73
Query: 99 QIRDFDGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ D G +G+I+ S + + + + + L P+ +S A ++
Sbjct: 74 -VTDACGEMGYIHSSQIRLQSNNQPQRGPVVCDVINIERGQLALRFSPNGKSR--AGLDN 130
Query: 155 GVLLTIRECSGEWCFGY--------NLDTEGWIKKQKI 184
G + + W EGW+ +
Sbjct: 131 GNTVRLLSQQRNWANVRVIQGPNPAVNGLEGWVNSDYL 168
>gi|229110073|ref|ZP_04239650.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228673426|gb|EEL28693.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 311
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GPG Y V+ L KG +V E W + G W+ +
Sbjct: 182 INGDNVNLRKGPGTGYAVI-RKLGKGECYQVWGESNGWLNL----GGDQWVYNDSSYIRY 236
Query: 120 SAIVSPWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P K T + + P +V V W
Sbjct: 237 TGENAPAPSKPSIDGIGVVTITANVLRVRTGPGTNYGVVKNVYQSERYQSWGYRDGWYNV 296
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 297 ---GGDQWVSGEYV 307
>gi|52550783|gb|AAU84437.1| invasion-associated protein p60 [Listeria innocua]
gi|52550785|gb|AAU84438.1| invasion-associated protein p60 [Listeria innocua]
gi|52550787|gb|AAU84439.1| invasion-associated protein p60 [Listeria innocua]
gi|52550791|gb|AAU84441.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|34014941|gb|AAQ56224.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|29378409|gb|AAO83906.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|149663|gb|AAA25283.1| extracellular protein [Listeria innocua]
Length = 481
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|29378511|gb|AAO83957.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|123443860|ref|YP_001007831.1| putative signal transduction protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122090821|emb|CAL13703.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 206
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + L + + A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLIVLSLTLSLSAYAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ + N+ QIRD G WI LS S V + + +
Sbjct: 50 LKGGDEVTLISVNDGTNYGQIRDSKGKTTWIPLDQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|94971083|ref|YP_593131.1| NLP/P60 [Candidatus Koribacter versatilis Ellin345]
gi|94553133|gb|ABF43057.1| Nlp/P60 [Candidatus Koribacter versatilis Ellin345]
Length = 292
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 9/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
L L+ P P V + AN P VV + G V +++
Sbjct: 8 LLTSFVLALSAFALGGGPAPDRVVV-VPVANMYSSPSASSDVVSQAI-LGSNVVTLQKKG 65
Query: 96 NWRQIRDFDGTIGWINKSLL-SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI---IVAK 151
W + + D GWI K L K S+ + + ++ N+Y++ D+ + +
Sbjct: 66 KWVKAQTSDQYTGWIEKRALRDAKNSSYATTGDTVQVTSLFANVYRETDVTAHAPIVTLP 125
Query: 152 VEPGV--LLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
E V + +G W D GWI+ +
Sbjct: 126 FESRVELIGHGSNDNGRWLQIRLPDKQTGWIQSGDV 161
>gi|49480396|ref|YP_039229.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331952|gb|AAT62598.1| conserved hypothetical protein, possible enterotoxin/cell
wall-binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 290
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 51/171 (29%), Gaps = 28/171 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + A F L + ++ + + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETVVT-----------TDVLNVRENPTTESKVVGKL 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLY 139
L G ++V W +I L GK + + + + + +N+
Sbjct: 50 LN-GNKIDVQNTENGWSKI-------------TLDGKDAFVSAEFTKSIYYVTANVLNVR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ EW ++ + G P
Sbjct: 96 AEANTDSEILGTLKKDDMIETTNRVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|325680539|ref|ZP_08160086.1| SH3 domain protein [Ruminococcus albus 8]
gi|324107777|gb|EGC02046.1| SH3 domain protein [Ruminococcus albus 8]
Length = 368
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 7/125 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ--IRDFDGTI-GWI---NKSL 114
AS N R GPG Y+ + TKG V K W I+ +G+ GW +
Sbjct: 54 TASGLNIRSGPGTGYSKLGA-ATKGTQFTVTKTQNGWGYGIIKCTNGSKTGWACLQYCTK 112
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + K +N+ + + +S + + +TI + + +
Sbjct: 113 TGNSDNERSVNYKVKITTKAGLNMRSQANTESSKMGAIPYNTTVTITKECNGFGYTNYSG 172
Query: 175 TEGWI 179
GWI
Sbjct: 173 KNGWI 177
>gi|34014939|gb|AAQ56223.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|114330855|ref|YP_747077.1| SH3 type 3 domain-containing protein [Nitrosomonas eutropha C91]
gi|114307869|gb|ABI59112.1| SH3, type 3 domain protein [Nitrosomonas eutropha C91]
Length = 227
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVV--KEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R GP + +V L G +EV+ + ++R G GW+ L + +A
Sbjct: 34 EVLVRTGPSHKHAIVKV-LKSGAELEVLERDRKSGYARVRTAGGAEGWVLTRHLMAEPAA 92
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V N P Q+ ++
Sbjct: 93 RVLLEALSNQFSGDDNRPDNPRAQADLI 120
>gi|328953984|ref|YP_004371318.1| SH3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454308|gb|AEB10137.1| SH3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 208
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 10/132 (7%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIR-DFDGTIGWINKSLLSGKR 119
A A R PG +VVC VE + W ++R + +GW+ LLS
Sbjct: 37 AGEAYLRECPGPDCSVVCRLYRSDQ-VEYLDTNGYGWWKVRALRNNAVGWMTADLLSAVT 95
Query: 120 SAIVSPWNRKTN----NPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGY--N 172
N INL+ P S + V+ + + + W
Sbjct: 96 PTPPPSPPPYPGYYYINASRINLHTYPMYSSGVTGVVQLNERVEKLGDSPQGWAKVRSLR 155
Query: 173 LDTEGWIKKQKI 184
+EGW+ + +
Sbjct: 156 NGSEGWLLRGYL 167
>gi|167752636|ref|ZP_02424763.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
gi|167659705|gb|EDS03835.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
Length = 275
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
L+ L R+ + + + T + L A +E ++ V ++
Sbjct: 168 GSALFYLLSRRLVRRKIGFYGTATAFLLLVLTLCFAAIDRREAIDRT---SAVVLR-DAV 223
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ P T + L +G VE+ W +I DG GW+ S
Sbjct: 224 AVKSSPDQNSTDLFI-LHEGTKVEISDRLNGWCEITIADGKKGWMECS 270
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + PD S + + G + I + WC +GW++
Sbjct: 220 RDAVAVKSSPDQNSTDLFILHEGTKVEISDRLNGWCEITIADGKKGWME 268
>gi|238793670|ref|ZP_04637293.1| hypothetical protein yinte0001_2900 [Yersinia intermedia ATCC
29909]
gi|238727085|gb|EEQ18616.1| hypothetical protein yinte0001_2900 [Yersinia intermedia ATCC
29909]
Length = 206
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + LAI A + EK R+++ + GPG Y +V T
Sbjct: 1 MLKIRLICLAILSLSISWGAHAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ ++ + QIRD G WI S LS S + + + +
Sbjct: 50 LKGGDEVTLISVDDSTSYGQIRDSKGKTTWIPLSQLSETPSLRIRVPDLEQQVKTLTD 107
>gi|313624828|gb|EFR94759.1| protein p60 [Listeria innocua FSL J1-023]
Length = 467
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 139
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 140 KATSTPVVKQEVKKE 154
>gi|320329327|gb|EFW85320.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 224
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPSLFAVSRRLLGAGLFGAALT-VVVPGNAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|52550801|gb|AAU84446.1| invasion-associated protein p60 [Listeria innocua]
Length = 463
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|17380517|sp|Q01836|P60_LISIN RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|52550797|gb|AAU84444.1| invasion-associated protein p60 [Listeria innocua]
gi|52550799|gb|AAU84445.1| invasion-associated protein p60 [Listeria innocua]
Length = 467
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVKQEVKKE 156
>gi|307305641|ref|ZP_07585388.1| protein of unknown function DUF1236 [Sinorhizobium meliloti BL225C]
gi|307317644|ref|ZP_07597083.1| protein of unknown function DUF1236 [Sinorhizobium meliloti AK83]
gi|306896802|gb|EFN27549.1| protein of unknown function DUF1236 [Sinorhizobium meliloti AK83]
gi|306902344|gb|EFN32940.1| protein of unknown function DUF1236 [Sinorhizobium meliloti BL225C]
Length = 209
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW
Sbjct: 30 AYAEMSATTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYA 89
Query: 182 QKI 184
+ +
Sbjct: 90 RYL 92
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWINKSLLS---GKR 119
N R GPG Y V V+ E NW +I D +G GW L+ G
Sbjct: 43 NVRAGPGPQYPAVGVATRGS--AAVLDGCMEGSNWCRI-DVNGLRGWAYARYLATDMGGT 99
Query: 120 SAIVSPWNRKTNNPIYI 136
+AI+ + + P
Sbjct: 100 TAIIQERRTELSVPTVA 116
>gi|293390380|ref|ZP_06634714.1| SH3 domain protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950914|gb|EFE01033.1| SH3 domain protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 203
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y + + G PV V+ + + + IRD WI S LS + S+
Sbjct: 36 LRKGAGDQYRISGA-IKSGEPVTVLDQKDRYTLIRDGKNREAWILSSELSNEASS 89
>gi|16799666|ref|NP_469934.1| invasion associated secreted endopeptidase [Listeria innocua
Clip11262]
gi|16413031|emb|CAC95823.1| P60 extracellular protein, invasion associated protein Iap
[Listeria innocua Clip11262]
Length = 465
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 139
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 140 KATSTPVVKQEVKKE 154
>gi|15966087|ref|NP_386440.1| hypothetical protein SMc01590 [Sinorhizobium meliloti 1021]
gi|15075357|emb|CAC46913.1| Hypothetical protein SMc01590 [Sinorhizobium meliloti 1021]
Length = 210
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW
Sbjct: 31 AYAEMSATTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYA 90
Query: 182 QKI 184
+ +
Sbjct: 91 RYL 93
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWINKSLLS---GKR 119
N R GPG Y V V+ E NW +I D +G GW L+ G
Sbjct: 44 NVRAGPGPQYPAVGVATRGS--AAVLDGCMEGSNWCRI-DVNGLRGWAYARYLATDMGGT 100
Query: 120 SAIVSPWNRKTNNPIYI 136
+AI+ + + P
Sbjct: 101 TAIIQERRTELSVPTVA 117
>gi|85705045|ref|ZP_01036145.1| hypothetical protein ROS217_04020 [Roseovarius sp. 217]
gi|85670367|gb|EAQ25228.1| hypothetical protein ROS217_04020 [Roseovarius sp. 217]
Length = 206
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPL---PRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
T+ P +A + + + L P F + + N R GPG + + T L +
Sbjct: 110 MTIPAQIPTTPEVAATAQLPAATDETLATSPDFRQVSGNSVNLRTGPGTRFDRI-TSLAR 168
Query: 85 GLPVEVVKEYEN-W--RQIRDFDGTIGWINKSLLS 116
G V V+ W ++ D D IGW+ S+++
Sbjct: 169 GTKVIVLHNPGEGWIKLRVVDTD-RIGWMADSMVT 202
>gi|311278032|ref|YP_003940263.1| SH3 type 3 domain-containing protein [Enterobacter cloacae SCF1]
gi|308747227|gb|ADO46979.1| SH3 type 3 domain protein [Enterobacter cloacae SCF1]
Length = 206
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 17/120 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
+ + L + LA + EK R+V+ N R GPG Y +V
Sbjct: 1 MPKLRLIGLTLLALSVSGLAHAEEK---------RYVS---DELNTWVRSGPGDNYRLVG 48
Query: 80 TYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T + G V +++ + + Q+RD G WI LS S + + +
Sbjct: 49 T-VNAGEEVSLLQTNDGSQYGQVRDSSGRTAWIPLKELSTTPSLKTRVPDLENQVKTLTD 107
>gi|291326510|ref|ZP_06573972.1| arylsulfatase [Providencia rettgeri DSM 1131]
gi|291313990|gb|EFE54443.1| arylsulfatase [Providencia rettgeri DSM 1131]
Length = 193
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ S GPG Y +V T L G VE++ + Q+RD G W+ L
Sbjct: 15 RYVSDDLST-YVHSGPGTKYRIVGT-LNAGEAVELLSTDNKFAQVRDEKGRTVWLPVDQL 72
Query: 116 SGKRSAIVSPWNRKTNNPIY 135
S S + N
Sbjct: 73 SNTPSMKTRIPELEAENQKL 92
>gi|150397442|ref|YP_001327909.1| hypothetical protein Smed_2242 [Sinorhizobium medicae WSM419]
gi|150028957|gb|ABR61074.1| protein of unknown function DUF1236 [Sinorhizobium medicae WSM419]
Length = 210
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ P Q V G + C WC GW
Sbjct: 31 AYAEMSATTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYA 90
Query: 182 QKI 184
+ +
Sbjct: 91 RYL 93
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWINKSLLS---GKR 119
N R GPG Y V V+ E NW +I D +G GW L+ G
Sbjct: 44 NVRAGPGPQYPAVGVATRGS--AAVLDGCMEGSNWCRI-DVNGLRGWAYARYLATDMGGT 100
Query: 120 SAIVSPWNRKTNNPIYI 136
+A++ + + P
Sbjct: 101 TAVIQERRTELSVPTVT 117
>gi|326203343|ref|ZP_08193208.1| SCP-like extracellular [Clostridium papyrosolvens DSM 2782]
gi|325986601|gb|EGD47432.1| SCP-like extracellular [Clostridium papyrosolvens DSM 2782]
Length = 261
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
Query: 18 MPKILQNSLIFTLAIY-FYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMY 75
M + +++ ++ + F P+ + + T+ A + R GP +
Sbjct: 1 MKTRKKTAIVLSIMVSAFTFLPVSLQYRVDASQAYQQVASAAGTVTAQDVHLRTGPNTKF 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+C L KG + V+ + +W + D +G +G ++ + ++T
Sbjct: 61 ESLCK-LKKGQKLTVMGKLGDWYAVYDSGNGNVGAVSSKYFKVTQQKKAEAKPKQTETAK 119
Query: 135 YINLYKKPDIQSIIVAKVEP 154
P + V V P
Sbjct: 120 KTVKTAAPKTVAAKVIDVSP 139
>gi|160935576|ref|ZP_02082951.1| hypothetical protein CLOBOL_00466 [Clostridium bolteae ATCC
BAA-613]
gi|158441320|gb|EDP19030.1| hypothetical protein CLOBOL_00466 [Clostridium bolteae ATCC
BAA-613]
Length = 767
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L+ L L + +++ ++F+ T+KA+ N R G G Y+ V
Sbjct: 16 KKLKRGLALVLGLMLAAEVPASVATPFQMFDSYAYTGAATVKATSLNVRSGAGTGYSSVG 75
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLS 116
L G V V+ E W QI+ + GT G +N +S
Sbjct: 76 R-LAAGAAVTVIGEQRGTDGNTWYQIQ-YTGTGGAVNTGYVS 115
>gi|148380275|ref|YP_001254816.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|148289759|emb|CAL83867.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 3502]
Length = 253
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ GWIN L GK AI N P IN+ S I+ + G + +
Sbjct: 182 NSDNGWIN---LDGKTGAI--------NTPSGINVRAGKSTSSKILGTLANGAKVNLYRK 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 231 EGDWMHIYYPPCGGYVYAKYI 251
>gi|319780683|ref|YP_004140159.1| hypothetical protein Mesci_0944 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166571|gb|ADV10109.1| protein of unknown function DUF1236 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 199
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQK 183
+ + +N+ P Q ++ + G T+ C + +WC +GW+
Sbjct: 22 ADTAVSAITDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENSKWCTIAEAGGQGWVYSDY 81
Query: 184 I 184
+
Sbjct: 82 V 82
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 13/99 (13%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
++ F + F + + N R GPG Y V+ L G +
Sbjct: 3 SLLFPAVAGMLTVMSGAAFADTAVS-----AITDLNVRAGPGPQYPVIGV-LAAGQSATL 56
Query: 91 VKEYEN--WRQIRDFDGTIGWINKSLLS----GKRSAIV 123
EN W I + G GW+ ++ G R +
Sbjct: 57 NGCIENSKWCTIAEAGGQ-GWVYSDYVTADIGGSRVVLT 94
>gi|291526247|emb|CBK91834.1| Cell Wall Hydrolase./Bacterial SH3 domain [Eubacterium rectale DSM
17629]
Length = 407
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
N +N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 111 NVEESLNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYV 159
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 9/127 (7%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R +V L KG ++V+ W I+ G++N S A+
Sbjct: 114 ESLNVRAQADEQSDIVGK-LYKGSVADIVENDGTWAHIK-SGNVDGYVNVSYCVTGTDAL 171
Query: 123 VSPWNR----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDT 175
++R T N + + + D S + + G + + W
Sbjct: 172 SYAYDRCGEIATVNTDGLRVREAADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQ 231
Query: 176 EGWIKKQ 182
G+I
Sbjct: 232 TGYIAAD 238
>gi|291526758|emb|CBK92344.1| Cell Wall Hydrolase./Bacterial SH3 domain [Eubacterium rectale
M104/1]
Length = 407
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 116 LNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYV 159
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 37/127 (29%), Gaps = 9/127 (7%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL----LSGK 118
N R +V L KG ++V+ W I+ G++N S
Sbjct: 114 ESLNVRAQADEQSDIVGK-LYKGSVADIVENDGTWAHIK-SGNVDGYVNVSYCVTGTDAL 171
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDT 175
A + T N + + + D S + + G + + W
Sbjct: 172 SYAYDTCGEIATVNTDGLRVRETADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQ 231
Query: 176 EGWIKKQ 182
G+I
Sbjct: 232 TGYIAAD 238
>gi|238922482|ref|YP_002935995.1| putative spore cortex-lytic enzyme [Eubacterium rectale ATCC 33656]
gi|238874154|gb|ACR73861.1| putative spore cortex-lytic enzyme [Eubacterium rectale ATCC 33656]
Length = 411
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 120 LNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYV 163
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 9/127 (7%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R +V L KG ++V+ W I+ G++N S A+
Sbjct: 118 ESLNVRAQADEQSDIVGK-LYKGSVADIVENDGTWAHIK-SGNVDGYVNVSYCVTGTDAL 175
Query: 123 VSPWNR----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDT 175
++R T N + + + D S + + G + + W
Sbjct: 176 SYAYDRCGEIATVNTDGLRVREAADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQ 235
Query: 176 EGWIKKQ 182
G+I
Sbjct: 236 TGYIAAD 242
>gi|22127402|ref|NP_670825.1| putative signal transduction protein [Yersinia pestis KIM 10]
gi|45442729|ref|NP_994268.1| putative signal transduction protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108809130|ref|YP_653046.1| putative signal transduction protein [Yersinia pestis Antiqua]
gi|108810676|ref|YP_646443.1| putative signal transduction protein [Yersinia pestis Nepal516]
gi|145597745|ref|YP_001161821.1| putative signal transduction protein [Yersinia pestis Pestoides F]
gi|150260317|ref|ZP_01917045.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162419991|ref|YP_001604912.1| putative signal transduction protein [Yersinia pestis Angola]
gi|165925104|ref|ZP_02220936.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939876|ref|ZP_02228415.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008891|ref|ZP_02229789.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212050|ref|ZP_02238085.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399461|ref|ZP_02304985.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419346|ref|ZP_02311099.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425088|ref|ZP_02316841.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|218927844|ref|YP_002345719.1| putative signal transduction protein [Yersinia pestis CO92]
gi|229837330|ref|ZP_04457493.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
Pestoides A]
gi|229840542|ref|ZP_04460701.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842910|ref|ZP_04463062.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229900870|ref|ZP_04515994.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
Nepal516]
gi|270487755|ref|ZP_06204829.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294502721|ref|YP_003566783.1| hypothetical protein YPZ3_0611 [Yersinia pestis Z176003]
gi|21960491|gb|AAM87076.1|AE013956_1 hypothetical protein y3528 [Yersinia pestis KIM 10]
gi|45437595|gb|AAS63145.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|108774324|gb|ABG16843.1| hypothetical protein YPN_0511 [Yersinia pestis Nepal516]
gi|108781043|gb|ABG15101.1| hypothetical protein YPA_3139 [Yersinia pestis Antiqua]
gi|115346455|emb|CAL19328.1| putative exported protein [Yersinia pestis CO92]
gi|145209441|gb|ABP38848.1| hypothetical protein YPDSF_0435 [Yersinia pestis Pestoides F]
gi|149289725|gb|EDM39802.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162352806|gb|ABX86754.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165912187|gb|EDR30825.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923304|gb|EDR40455.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992230|gb|EDR44531.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206796|gb|EDR51276.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963340|gb|EDR59361.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051965|gb|EDR63373.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055851|gb|EDR65632.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682209|gb|EEO78301.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
Nepal516]
gi|229690177|gb|EEO82234.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696908|gb|EEO86955.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229705453|gb|EEO91463.1| predicted signal transduction protein (SH3 domain) [Yersinia pestis
Pestoides A]
gi|262360752|gb|ACY57473.1| hypothetical protein YPD4_0564 [Yersinia pestis D106004]
gi|262364698|gb|ACY61255.1| hypothetical protein YPD8_0565 [Yersinia pestis D182038]
gi|270336259|gb|EFA47036.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294353180|gb|ADE63521.1| hypothetical protein YPZ3_0611 [Yersinia pestis Z176003]
gi|320016789|gb|ADW00361.1| hypothetical protein YPC_3926 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 207
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + L I A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLTILSVSLSWGAQAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ N+ QIRD G WI + LS S V + + +
Sbjct: 50 LKGGDEVTLISVDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTD 107
>gi|332653100|ref|ZP_08418845.1| mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium
D16]
gi|332518246|gb|EGJ47849.1| mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium
D16]
Length = 246
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 98 RQIR-----------DFDGTIGWINKSLLSGKRSAI---------------VSPWNRKTN 131
R++R D WI ++L + ++ + S R
Sbjct: 131 RRVRAPAVFLELGYHDNQEDAAWIKQNLDAVAKNLVMSLCDFFDIPFLDPSTSRSGRVDV 190
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ +PD+++ I+A+ G LTI SG W T G+ K +
Sbjct: 191 DWGVLNIRARPDLEAPILAQAPDGSPLTILNQSGGWYLVNYAGTIGYAKDDFV 243
>gi|225025093|ref|ZP_03714285.1| hypothetical protein EIKCOROL_01983 [Eikenella corrodens ATCC
23834]
gi|224942185|gb|EEG23394.1| hypothetical protein EIKCOROL_01983 [Eikenella corrodens ATCC
23834]
Length = 138
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLLSGK 118
+ N R P ++ ++ + + NW +R G G+I+KS
Sbjct: 4 GDKVNLRAQPTTQSRILAQLADDEEKLDFLGKQGNWFHVRRLYGGRHVEGYIHKSQGHLL 63
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSII-VAKVEPGVLLTIRE--CSGEWCFGYNLDT 175
S IVS +R + + + + I ++ G + + G+W +
Sbjct: 64 HSYIVS--SRDGYANVRTERQDQDNAGTRIQTGQLRTGTRVWVLPEWNEGDWLYI-AKPM 120
Query: 176 EGWIKKQKI 184
+G+I K ++
Sbjct: 121 DGFIHKSQL 129
>gi|172063056|ref|YP_001810707.1| SH3 type 3 domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171995573|gb|ACB66491.1| SH3 type 3 domain protein [Burkholderia ambifaria MC40-6]
Length = 289
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
++ L+ P +VA++ PG + + C + WC GWI
Sbjct: 22 IADAQSSAYTNSGAELFAGPAPDYPVVAQLPPGTAVDVFGCLSDYSWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q++
Sbjct: 82 AQQL 85
>gi|148658481|ref|YP_001278686.1| SH3 type 3 domain-containing protein [Roseiflexus sp. RS-1]
gi|148570591|gb|ABQ92736.1| SH3, type 3 domain protein [Roseiflexus sp. RS-1]
Length = 353
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----E 95
A P+ ++ R N R GPGI Y VV T L +G V + E +
Sbjct: 275 ATPQVDVQAAPTAAPQIWSVAVERLNLRAGPGIDYPVVTT-LKRGDDVIDLGETAGSGED 333
Query: 96 NWRQIRDFDGTIGWINKSLL 115
W ++R GW+ ++ L
Sbjct: 334 RWVRVR-AGTQEGWVFRAFL 352
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGE----WCFGYNLDTEG 177
+ + +NL P I +V ++ G ++ + E +G W EG
Sbjct: 286 TAAPQIWSVAVERLNLRAGPGIDYPVVTTLKRGDDVIDLGETAGSGEDRWVRVRAGTQEG 345
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 346 WVFRAFL 352
>gi|163846994|ref|YP_001635038.1| peptidase M23B [Chloroflexus aurantiacus J-10-fl]
gi|222524816|ref|YP_002569287.1| peptidase M23 [Chloroflexus sp. Y-400-fl]
gi|163668283|gb|ABY34649.1| peptidase M23B [Chloroflexus aurantiacus J-10-fl]
gi|222448695|gb|ACM52961.1| Peptidase M23 [Chloroflexus sp. Y-400-fl]
Length = 467
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 18/51 (35%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P A++ G + +R +W D GWI+ +
Sbjct: 269 DETNVRSGPSTDHPRQAQLAAGRQVALRGRYNDWVKIEIGDITGWIRSDLL 319
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GP + L G V + Y +W +I D GWI LL
Sbjct: 269 DETNVRSGPSTDHPRQ-AQLAAGRQVALRGRYNDWVKIEIGD-ITGWIRSDLL 319
>gi|281356511|ref|ZP_06243003.1| Tetratricopeptide TPR_2 repeat protein [Victivallis vadensis ATCC
BAA-548]
gi|281317203|gb|EFB01225.1| Tetratricopeptide TPR_2 repeat protein [Victivallis vadensis ATCC
BAA-548]
Length = 843
Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQS-IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+R N + L P S I A V G T+ E G+W +GW +I
Sbjct: 776 DRGIVNGNSLELRTLPAAASGRIEATVPGGSAATVVERRGDWLRVKVNGRDGWAPAGRIN 835
Query: 186 GIYPGEVF 193
I+PG VF
Sbjct: 836 IIFPGGVF 843
>gi|322514486|ref|ZP_08067524.1| bacterial SH3 domain protein [Actinobacillus ureae ATCC 25976]
gi|322119599|gb|EFX91673.1| bacterial SH3 domain protein [Actinobacillus ureae ATCC 25976]
Length = 201
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R G G Y + + G V V+ + + IRD GW+ S +S S
Sbjct: 34 MRKGAGDQYKISGA-IQAGEKVTVLDRKDRFVLIRDSKNREGWVLASEISQTTS 86
>gi|115358295|ref|YP_775433.1| SH3 type 3 domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283583|gb|ABI89099.1| SH3, type 3 domain protein [Burkholderia ambifaria AMMD]
Length = 283
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
++ L+ P +VA++ PG + + C + WC GWI
Sbjct: 22 IADAQSSAYTNSGAELFAGPAPDYPVVAQLPPGTAVDVFGCLSDYSWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q++
Sbjct: 82 AQQL 85
>gi|172058553|ref|YP_001815013.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sibiricum 255-15]
gi|171991074|gb|ACB61996.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sibiricum 255-15]
Length = 1194
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 12/139 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+E P ++ T A+ S GP Y V T K + + V NW +I + G
Sbjct: 661 AYEALPATKYKTSAATPLRSYAGPS--YAPVTTIPNKTV-ITVTGRIGNWVKIT-YAGKS 716
Query: 108 GW-INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---- 162
G+ + +L + ++ + P+ + + +A + G + T +
Sbjct: 717 GYAVASTLTEFSETTTIAEARFLLDAPVAVK--SDAKDTATTIANLNKGNVYTTKTLVTT 774
Query: 163 -CSGEWCFGYNLDTEGWIK 180
+G+W G+IK
Sbjct: 775 SANGQWHQVTVNGKTGYIK 793
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
E W ++ DG G++ + GK + + L+ ++ +
Sbjct: 360 EQWHKVS-KDGKTGYVKVNQ--GKTIKYYTVHDLSLKTTTATALHSYAGPSYGVIKTIPN 416
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIK 180
G ++ I+ G W G+
Sbjct: 417 GTVVKIQGQIGNWYKVSYDGKSGYAA 442
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP Y V+ + G V++ + NW ++ +DG G+ + + + P
Sbjct: 404 AGPS--YGVI-KTIPNGTVVKIQGQIGNWYKVS-YDGKSGYAAGTTFTDYVTTQPIPAT- 458
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT----IRECSGEWCFGYNLDTEGWIKKQK 183
+ + P + V + + + S +W G+I +
Sbjct: 459 DIQLETDVAMKAAPKANAATVTMFKTKDIYQTNQLVTNGSSKWHRVTKDGQTGYIPVDQ 517
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 4/105 (3%)
Query: 89 EVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++ + +++ +DG + L+ A L +
Sbjct: 143 KITNSVGEIFYRVK-YDGKT--VYARALNATPIAYTKMSKTALKTTDGYILRQYAGTAYP 199
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
V G L G+W G++ K G EV
Sbjct: 200 RQIVVPTGTSLQTTGRIGDWYNVTYAGKSGYMHKGAFAGSSKQEV 244
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
E W ++ DG G++ + G A + K L V
Sbjct: 635 GRAEQWHRMT-IDGKTGYVRVNQ--GTSIAYEALPATKYKTSAATPLRSYAGPSYAPVTT 691
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++T+ G W G+ +
Sbjct: 692 IPNKTVITVTGRIGNWVKITYAGKSGYAVASTL 724
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 7/143 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL---PVEVVKEYEN 96
A + + +P+P + + P V + TK + V
Sbjct: 441 AAGTTFTDYVTTQPIPATDIQLETDVAMKAAPKANAATVTMFKTKDIYQTNQLVTNGSSK 500
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W ++ DG G+I + + S N L VA +
Sbjct: 501 WHRVT-KDGQTGYI---PVDQGKPVDYSSENMAMKATETTILRTYAGNSYATVATIATNT 556
Query: 157 LLTIRECSGEWCFGYNLDTEGWI 179
+ + +W G++
Sbjct: 557 NVQVIGKIQDWYKVSANGKTGYV 579
>gi|258406464|ref|YP_003199206.1| 17 kDa surface antigen [Desulfohalobium retbaense DSM 5692]
gi|257798691|gb|ACV69628.1| 17 kDa surface antigen [Desulfohalobium retbaense DSM 5692]
Length = 316
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAI- 122
N R GPG Y V L +G V VV + NW + +IG++ SLL +
Sbjct: 156 NVRSGPGTTYKAV-NLLQQGDVVTVVGQVKDRNWYMVGRDGRSIGYVYASLLREVPESAG 214
Query: 123 ---VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
V P + + +A GVL
Sbjct: 215 APEVVPVQTAKASAEPEQQQASQETADPSLASARQGVL 252
>gi|331019696|gb|EGH99752.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 224
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ +L R P + S A F A L + + R+V+ +
Sbjct: 3 RHFSALLSRA--PGLFAVSRRVLGAGLFGAALTLVVPSSVQAAGND---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R GP + +V T L G +E++ N+ Q+R G WI S L I
Sbjct: 57 VRSGPTDGHRIVGT-LKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDLQDVPGQI 111
>gi|28869114|ref|NP_791733.1| hypothetical protein PSPTO_1910 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852354|gb|AAO55428.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 249
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 7/119 (5%)
Query: 4 HAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS 63
+ +L R P + S A F A L + + R+V+ +
Sbjct: 25 AMSRHFSALLSRA--PGLFAVSRRVLGAGLFGAALTLVVPASVQAAGND---RWVS-DSL 78
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R GP + +V T L G +E++ N+ Q+R G WI S L I
Sbjct: 79 TTYVRSGPTDGHRIVGT-LKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDLQDVPGQI 136
>gi|330967553|gb|EGH67813.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 224
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ +L R P + S A F A L + + R+V+ +
Sbjct: 3 RHFSALLSRA--PGLFAVSRRVLGAGLFGAALTLVVPASVQAAGND---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R GP + +V T L G +E++ N+ Q+R G WI S L I
Sbjct: 57 VRSGPTDGHRIVGT-LKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDLQDVPGQI 111
>gi|266725|sp|Q01837|P60_LISIV RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149665|gb|AAA25284.1| extracellular protein [Listeria ivanovii]
Length = 524
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVTATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWYKISYGEGKTGYVNGKYLGT 140
Query: 118 KRSAIVSPWNRKT 130
++ +P ++
Sbjct: 141 TVTSAPAPEVKEE 153
>gi|330875949|gb|EGH10098.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 224
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ +L R P + S A F A L + + R+V+ +
Sbjct: 3 RHFSALLSRA--PGLFAVSRRVLGAGLFGAALTLVVPASVQAAGND---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R GP + +V T L G +E++ N+ Q+R G WI S L I
Sbjct: 57 VRSGPTDGHRIVGT-LKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDLQDVPGQI 111
>gi|56415143|ref|YP_152218.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364072|ref|YP_002143709.1| signal transduction protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129400|gb|AAV78906.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095549|emb|CAR61114.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 204
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDNYHLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ QI+D G WI L+ S + + +
Sbjct: 55 EVTLLQSDANYGQIKDSSGRTAWIPLKELNTTPSLRTRVPDLENQVKTLTD 105
>gi|319892685|ref|YP_004149560.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus pseudintermedius HKU10-03]
gi|317162381|gb|ADV05924.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus pseudintermedius HKU10-03]
gi|323464277|gb|ADX76430.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus pseudintermedius
ED99]
Length = 291
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 17/90 (18%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKSLLSGKRSAIVSP 125
R GP Y V+ + KG + + W ++R +G GWI +
Sbjct: 54 IRTGPNAAYPVLYQ-VHKGDEFLQIGKQGKWIEVRSANGKQKGWI-------------AG 99
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W+ + P +N + P IV ++PG
Sbjct: 100 WHTNLDIPADVNPHANPLRDKTIV--LDPG 127
>gi|110635670|ref|YP_675878.1| hypothetical protein Meso_3342 [Mesorhizobium sp. BNC1]
gi|110286654|gb|ABG64713.1| protein of unknown function DUF1236 [Chelativorans sp. BNC1]
Length = 225
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
++ +N+ P +V + T+ C WC + +GW
Sbjct: 21 IAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVSHNGVQGWAY 80
Query: 181 KQKI 184
+
Sbjct: 81 SDYL 84
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 6/100 (6%)
Query: 66 NSRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK----RS 120
N R GPG Y VV ++ V + W Q+ +G GW L+ ++
Sbjct: 35 NVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVS-HNGVQGWAYSDYLTATMGGGQT 93
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+++ + D + V I
Sbjct: 94 VVLTERPADAVPTVTYETTASTDGAGALTGATTGAVAGAI 133
>gi|330828454|ref|YP_004391406.1| Arylsulfatase [Aeromonas veronii B565]
gi|328803590|gb|AEB48789.1| Arylsulfatase [Aeromonas veronii B565]
Length = 201
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 14/90 (15%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L I L AL+ R+V+ GPG Y ++ + + G P
Sbjct: 3 ALLGILICLCAQQALADT----------RYVS-DNIFTYIHNGPGTQYRILGS-VKAGEP 50
Query: 88 VEV--VKEYENWRQIRDFDGTIGWINKSLL 115
+EV V + Q+ D G GWI S L
Sbjct: 51 LEVKAVNSEAGFTQVVDGRGREGWIKNSEL 80
>gi|213967608|ref|ZP_03395756.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301385688|ref|ZP_07234106.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato Max13]
gi|302062711|ref|ZP_07254252.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato K40]
gi|302134859|ref|ZP_07260849.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213927909|gb|EEB61456.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 224
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ +L R P + S A F A L + + R+V+ +
Sbjct: 3 RHFSALLSRA--PGLFAVSRRVLGAGLFGAALTLVVPASVQAAGND---RWVS-DSLTTY 56
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R GP + +V T L G +E++ N+ Q+R G WI S L I
Sbjct: 57 VRSGPTDGHRIVGT-LKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDLQDVPGQI 111
>gi|295115044|emb|CBL35891.1| Bacterial SH3 domain. [butyrate-producing bacterium SM4/1]
Length = 306
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP + E+ E P R+ T + N R P + + L G VE +++Y
Sbjct: 224 TIAPTEKATTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQ-LAPGTEVEYIEDY 280
Query: 95 EN-WRQIRDFDGTIGWINKSLL 115
++ W +I F+G G+++K L
Sbjct: 281 DDTWVKIT-FEGQEGYVSKEYL 301
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ ++ +N+ +P + + ++ PG + I + W EG++ K+
Sbjct: 240 AAPAKRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEGQEGYVSKE 299
Query: 183 KI 184
+
Sbjct: 300 YL 301
>gi|253580043|ref|ZP_04857310.1| predicted protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848562|gb|EES76525.1| predicted protein [Ruminococcus sp. 5_1_39BFAA]
Length = 191
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 12/131 (9%)
Query: 65 ANSRIGPGIMYT-VVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWINKSLLSG- 117
N R G G+ Y V+ + G + V +E +W +++GT GWI + ++
Sbjct: 57 VNMRCGAGVEYDKVLPDMIPNGTVLTVTQEAVASNGNSWGY-TNYNGTYGWIALTQVTRY 115
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNL 173
A + N I L PD+ + + ++ G + T + + Y
Sbjct: 116 QEPTEGAPIPHTRYVINCNESITLRTNPDVNAAEICQIPLGTAVATFGDAGNGFISVYYQ 175
Query: 174 DTEGWIKKQKI 184
+ G+ +
Sbjct: 176 GSSGYCLASYL 186
>gi|239626583|ref|ZP_04669614.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516729|gb|EEQ56595.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 542
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 12/135 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG----TIGWINKS 113
T+ N R P + + V G V+ + + W QI +G ++ S
Sbjct: 178 ATVTTDNLNIRQAPELDPSNVVGQALMGERYVVLGQQDGWIQIE--EGYISADYAEVSYS 235
Query: 114 LLSGKRSAIVSPWNRKTNN------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
L G++ + + + +N Y+N+ ++P I+ K+ + E W
Sbjct: 236 LNEGRKLDMKAMAINQYDNLVISKVNNYLNVREEPKSDGKIIGKMTSKAAGEVLETLDGW 295
Query: 168 CFGYNLDTEGWIKKQ 182
+ G+I
Sbjct: 296 YKIKSGPIIGYISAD 310
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P I+ K+ I + G+W + +G+I Q +
Sbjct: 111 YLNIRETPSTDGKIIGKLSGDGACEILQTEGDWSHITSGGVDGYISNQYL 160
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 12/127 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-- 113
++ + N R P ++ T G EV++ + W +I+ IG+I+
Sbjct: 257 ISKVNNYLNVREEPKSDGKIIGKMTSKAAG---EVLETLDGWYKIK-SGPIIGYISADPQ 312
Query: 114 -LLSGKRS---AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+G+ + A+ + R N +N+ +P + I ++ + W
Sbjct: 313 YTATGQEAKDIAMQTATLRAVINTDVLNVRTEPTTDAKIWTQIVKDERYPVVAQLDGWVE 372
Query: 170 GYNLDTE 176
+
Sbjct: 373 IELDSVD 379
>gi|86355807|ref|YP_467699.1| hypothetical protein RHE_CH00147 [Rhizobium etli CFN 42]
gi|86279909|gb|ABC88972.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 297
Score = 44.2 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ P + VA + G + IR C + WC GW+ Q + +Y
Sbjct: 101 VNMRAGPSTRYPAVAVIPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVY 155
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSG---KR 119
N R GP Y V + G VE+ NW + + G GW++ + +R
Sbjct: 101 VNMRAGPSTRYPAVAV-IPAGSSVEIRGCLSNVNWCDVEFYGG-RGWVSGQYVQAVYEQR 158
Query: 120 SAIVSPW 126
V P
Sbjct: 159 RVYVGPQ 165
>gi|291240204|ref|XP_002740010.1| PREDICTED: SH3 and PX domains 2A-like [Saccoglossus kowalevskii]
Length = 847
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 23/117 (19%)
Query: 82 LTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L G VEV+++ ++ W + +G GW+ + L P N + +
Sbjct: 688 LHAGDNVEVIEKNDSGWWFVVV--EGEQGWVPAAYLEK-------PGEENQINEDFQTIE 738
Query: 140 KKPDIQSIIVAK-----------VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+S + + ++ GV++ + + + W F + EGW +
Sbjct: 739 VGNGQESYVTIQKYKAENDDEISLDNGVVVLVLKKNLDGWWFVRHEGREGWAPATYL 795
>gi|237751941|ref|ZP_04582421.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376700|gb|EEO26791.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 246
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 25/197 (12%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILA-LSHEKEIFEKKPLPRFVTIKASRANSRI 69
S+ +P+ Q LI P+ A L+ +++ E P+ ++ S N R
Sbjct: 48 SMQSVAEIPQSAQQVLIQEARTQPSQIPLEAPLTTPQQLPESNPIIFLTSLVKS-LNIRQ 106
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI--GW--------INKSL----- 114
+V + + E + W + D + GW I
Sbjct: 107 DTNTQSPIVGKLTPTQTAIS-LDERDGWVLLADSNTKEPIGWSLKRFTKEIEAPQKLESK 165
Query: 115 --LSGKRSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ ++ I + + + +N+ + P ++ I+ K+ P ++I E +G W
Sbjct: 166 INVATPQTLIQTETKQALYASKVPSLNIRENPSTEARILNKLTPSDAVSIVETNGIWVKI 225
Query: 171 Y---NLDTEGWIKKQKI 184
GW+ ++ +
Sbjct: 226 QDSTTSGKNGWVVRRSL 242
>gi|118590979|ref|ZP_01548379.1| hypothetical protein SIAM614_20001 [Stappia aggregata IAM 12614]
gi|118436501|gb|EAV43142.1| hypothetical protein SIAM614_20001 [Stappia aggregata IAM 12614]
Length = 218
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + C G WC + GW+ + +
Sbjct: 161 DDVLNVRKGPGTRHAVTGALAAGTCNVELSESCEGSWCEIRSDTISGWVNTRYL 214
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 58 VTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLL 115
V+I N R GPG + V VE+ +W +IR D GW+N L
Sbjct: 156 VSIARDDVLNVRKGPGTRHAVTGALAAGTCNVELSESCEGSWCEIR-SDTISGWVNTRYL 214
>gi|270340079|ref|ZP_06006964.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332760|gb|EFA43546.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 260
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++P+++ + F + F L L+ + + I A N + P
Sbjct: 159 FVPQLVWRKVGFFGGVLFILVFALSTLFAWSQHKALAEGKGAIIMAPSVNVKSTPVQNSE 218
Query: 77 VVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
L +G V+V + WR IR DG GW+ S L
Sbjct: 219 -DSFILHEGTRVDVTDSSMKTWRGIRLPDGREGWMPASQL 257
>gi|190889818|ref|YP_001976360.1| hypothetical protein RHECIAT_CH0000186 [Rhizobium etli CIAT 652]
gi|218516127|ref|ZP_03512967.1| hypothetical protein Retl8_21878 [Rhizobium etli 8C-3]
gi|190695097|gb|ACE89182.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 229
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ P + VA + G + IR C + WC GW+ Q + +Y
Sbjct: 32 VNMRAGPSTRYPAVAVIPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVY 86
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
N R GP Y V + G VE+ NW + + G GW++ +
Sbjct: 32 VNMRAGPSTRYPAVAV-IPAGSSVEIRGCLSNVNWCDVEFYGG-RGWVSGQYV 82
>gi|294784099|ref|ZP_06749400.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_27]
gi|294488169|gb|EFG35514.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_27]
Length = 155
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 56 RF-VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQI-----RDFDGTI 107
RF V K AN R I ++ + V+V + +W + R +
Sbjct: 21 RFIVNSKDGYANLRKEAAIDSEII---VELDNSVQVSSFFKRGDWYYVEVLGMRPPEYVR 77
Query: 108 GWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
G+I++S L S + I ++ Y N+ +P + S +V + G +T G
Sbjct: 78 GFIHESQLEFSSETYVI-------SSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVG 130
Query: 166 EWCFGYNLDTE-GWIKKQKI 184
+W + G+I K ++
Sbjct: 131 DWYYIEFTAYNYGYIHKSQL 150
>gi|146313094|ref|YP_001178168.1| putative signal transduction protein [Enterobacter sp. 638]
gi|145319970|gb|ABP62117.1| SH3 domain protein [Enterobacter sp. 638]
Length = 207
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 17/121 (14%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVV 78
++ + LA+ A + EK R+V+ N R GPG Y +V
Sbjct: 1 MMLKFRLIGLALLTLSAATAVHAEEK---------RYVS---DELNTWVRSGPGDNYRLV 48
Query: 79 CTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
T + G V +++ + ++ Q+RD G WI LS S + +
Sbjct: 49 GT-VNAGEEVVLLQTNQDTSYGQVRDSTGRTSWIPLKELSNVPSLRTRVPDLENQVKTLT 107
Query: 137 N 137
+
Sbjct: 108 D 108
>gi|313624220|gb|EFR94278.1| bifunctional autolysin [Listeria innocua FSL J1-023]
Length = 759
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 10/126 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R G +V T + + + V + W +I G G++ +S LS +
Sbjct: 251 VNLRAGRSFDTAIV-TSIPQNQEMYVEDGSMDNNGWVKIITNTGETGFMRESYLS---TY 306
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGW 178
+ + +N+ S I+ + + + + S W G+
Sbjct: 307 DPTKIYFENYAISDLNIRSSRSYDSEIIVQAPKNAKVYVEQNSTDANGWMKVAYKGRIGY 366
Query: 179 IKKQKI 184
+K I
Sbjct: 367 MKSAYI 372
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 54/178 (30%), Gaps = 25/178 (14%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M +I LI L + L +L + + + L + + N R +V
Sbjct: 1 MIRIKIKKLICKLLLIMLLGTVLFPTVKAYAASES-LYYYA---INDINLRSQRDFSSSV 56
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN------ 131
V T + K V+V E+ GW+ S S ++
Sbjct: 57 VTT-IPKNEEVKVKPRSED---------NDGWVEISYKSHTGYMKINYLTMLNPLRSYGE 106
Query: 132 --NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGWIKKQKI 184
P INL S I+ + + + S W G++K+ +
Sbjct: 107 YYAPSMINLRADRSFDSAILLAIPTNEKFFVEDNSKDSDGWVRIVYEGNVGYMKEGYL 164
>gi|148262808|ref|YP_001229514.1| hypothetical protein Gura_0731 [Geobacter uraniireducens Rf4]
gi|146396308|gb|ABQ24941.1| hypothetical protein Gura_0731 [Geobacter uraniireducens Rf4]
Length = 204
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 82 LTKGLPVEVVKEYENWRQIR-DFDGTIGWIN---KSLLSGKRSAIV--SPWNRKTNNPIY 135
+ PV V+ + NW +I D G GW+ S S + +
Sbjct: 78 RREEYPVAVIGKKGNWLRIAYDDAGREGWLEMPRYWEYSPWGSFLKGRAARLLPGLKKDL 137
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
L ++P S + + L I E +W T GW++
Sbjct: 138 YLLRREPSPTSPQIDTLSRQKNLRIIEIKEDWALVLVDLTAYGWMR 183
>gi|67924045|ref|ZP_00517495.1| hypothetical protein CwatDRAFT_2252 [Crocosphaera watsonii WH 8501]
gi|67854112|gb|EAM49421.1| hypothetical protein CwatDRAFT_2252 [Crocosphaera watsonii WH 8501]
Length = 187
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 22/141 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-------WRQIRDFD-GTIGWINK 112
+ SR N R P + ++ L + + W +++ G IGWI
Sbjct: 45 RNSRINLRSQPSVNSALLGYGLPDDQVTLLEFRKGSGNEPRVPWIRVKFVKSGDIGWIRG 104
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------ 166
+ + + + + INL + P I + + G + + EC
Sbjct: 105 YFVKTDITILTA-----NDPNARINLRQGPSISTGSLGYGLVGDRIRVLECETGPDQDRI 159
Query: 167 -WCFGYNLDTE--GWIKKQKI 184
W L ++ GWI+ +
Sbjct: 160 PWIKVQFLQSQAIGWIRGDFV 180
>gi|229096751|ref|ZP_04227721.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-29]
gi|228686593|gb|EEL40501.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-29]
Length = 333
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 211 VNLRSGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYYDPSYINFVKTSN 265
Query: 123 VSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEP 154
+NL P S ++ K+
Sbjct: 266 SDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNK 299
>gi|229102852|ref|ZP_04233546.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-28]
gi|228680525|gb|EEL34708.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-28]
Length = 333
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 211 VNLRSGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYYDPSYINFVKTSN 265
Query: 123 VSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEP 154
+NL P S ++ K+
Sbjct: 266 SDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNK 299
>gi|229115731|ref|ZP_04245134.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-3]
gi|228667716|gb|EEL23155.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-3]
Length = 338
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 216 VNLRSGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYYDPSYINFVKTSN 270
Query: 123 VSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEP 154
+NL P S ++ K+
Sbjct: 271 SDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNK 304
>gi|222084359|ref|YP_002542888.1| hypothetical protein Arad_0219 [Agrobacterium radiobacter K84]
gi|221721807|gb|ACM24963.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 306
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 15/94 (15%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ L + AL+ E F + N R GP Y V T + G+
Sbjct: 5 LLAAFTLTALVALPALAQAAEGFA-----------TANVNMRSGPSTQYPAV-TMIPAGV 52
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGK 118
P+E+ W + F G GW+ +
Sbjct: 53 PLEINGCLNETPWCDVS-FVGGRGWVAGRYIQAT 85
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 111 NKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+K L + +A+V+ + +N+ P Q V + GV L I C E
Sbjct: 3 HKLLAAFTLTALVALPALAQAAEGFATANVNMRSGPSTQYPAVTMIPAGVPLEINGCLNE 62
Query: 167 --WCFGYNLDTEGWIKKQKI 184
WC + GW+ + I
Sbjct: 63 TPWCDVSFVGGRGWVAGRYI 82
>gi|168214548|ref|ZP_02640173.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
gi|170713985|gb|EDT26167.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
Length = 335
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 21/117 (17%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + + V +Y W I + G G++++ + + A N
Sbjct: 233 GDRFRIKW----------VDSDYLGWYYIE-YQGITGYVSQDYVEKLQMATT------CN 275
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFG-YNLDTEGWIKKQKI 184
+N+ + + S IVA + PG + I + W G++K +
Sbjct: 276 VDSVLNVRAEGNTSSNIVATINPGEVFRIDWVDSDFIGWYRITTANGANGFVKSDFV 332
>gi|85058237|ref|YP_453939.1| putative signal transduction protein [Sodalis glossinidius str.
'morsitans']
gi|84778757|dbj|BAE73534.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 206
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINK 112
PR+V+ GPG Y +V T L G V ++ + ++ + Q+RD G WI +
Sbjct: 25 PRYVS-DNLLTYIHSGPGNQYRIVGT-LNSGDTVTLLCQNDDTGFAQVRDEKGRTAWIPQ 82
Query: 113 SLLSGKRS 120
LS + S
Sbjct: 83 EQLSAQPS 90
>gi|323490996|ref|ZP_08096190.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Planococcus donghaensis MPA1U2]
gi|323395352|gb|EGA88204.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Planococcus donghaensis MPA1U2]
Length = 470
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ + N R+ P ++V + + KG VE + + W +++ + GW+N + LS +
Sbjct: 225 VTTDQLNMRLKPNASSSLVGS-IPKGGKVEYISKEGTWYKVK-YGSKTGWVNSAYLSDQ 281
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP+ S +V + G + G W GW+ +
Sbjct: 226 TTDQLNMRLKPNASSSLVGSIPKGGKVEYISKEGTWYKVKYGSKTGWVNSAYL 278
>gi|154685320|ref|YP_001420481.1| YfhK [Bacillus amyloliquefaciens FZB42]
gi|154351171|gb|ABS73250.1| YfhK [Bacillus amyloliquefaciens FZB42]
Length = 175
Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 15/177 (8%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
L ++P + ++F A A H+ +I ++ +KA N R P
Sbjct: 6 GLTAFIPAAGLCLFLAGGTVFFDPAANAAAVHQTKIDTAADT--YI-VKAGELNVRKEPN 62
Query: 73 IMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+++ T L V+V + +W +I D+ G +I+ L + V+
Sbjct: 63 KQGSIIGT-LRSEDSVKVKRLQGADWAEI-DYKGHKAYISTHFLMKQPVKAVTAKQTAFY 120
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQKI 184
P + + A VL G W + G++K +
Sbjct: 121 TPTLET-----GKKGSVKAGETVNVLGWGFSHDGGFDRKWAYVTYGGKAGYVKTADL 172
>gi|330953699|gb|EGH53959.1| SH3 type 3 domain-containing protein [Pseudomonas syringae Cit 7]
Length = 197
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + + A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFVVSRRLLGAGLVGAALT-VVVPGSAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|218129595|ref|ZP_03458399.1| hypothetical protein BACEGG_01172 [Bacteroides eggerthii DSM 20697]
gi|217988325|gb|EEC54648.1| hypothetical protein BACEGG_01172 [Bacteroides eggerthii DSM 20697]
Length = 351
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 14/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L+ + F + A++ + S N R PG
Sbjct: 1 MRRFLLILAVVLFAMTAFAAIAPGL----------YRVNVNSTLNVRNAPG---GAKIGS 47
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+ G V+V ++W Q+ DG G++++ L + + +P + L
Sbjct: 48 LSNGDLVQVTACEDDWAQVSLNDGRTGYVHEQYLEPFST-LAAPAGTSYSTVGLSELR 104
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
A ++P + N +N+ P + + G L+ + C +W N G++
Sbjct: 19 AAIAPGLYRVNVNSTLNVRNAPG--GAKIGSLSNGDLVQVTACEDDWAQVSLNDGRTGYV 76
Query: 180 KKQKI 184
+Q +
Sbjct: 77 HEQYL 81
>gi|300727141|ref|ZP_07060560.1| putative BatD protein [Prevotella bryantii B14]
gi|299775685|gb|EFI72276.1| putative BatD protein [Prevotella bryantii B14]
Length = 868
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++Y M KI I + + F +A + A ++ + + + A N
Sbjct: 763 LIYLFSYNILMRKIGFFGGILFI-VLFLMANLFAFQQKQTLLNRSG----AIVIAPTVNV 817
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
P T G V++ + ++WR I+ DG GWI +
Sbjct: 818 MKTPSTNSTQSFVIHE-GTHVDITDKTMKDWRGIKLADGREGWIETKQI 865
>gi|283798795|ref|ZP_06347948.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291073481|gb|EFE10845.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|295092709|emb|CBK78816.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Clostridium cf. saccharolyticum K10]
Length = 491
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 12/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVC-TYLTKGLPV--EVVKEYENWRQIRDFDGTI-GWINKS 113
V+ ++ N R P VV Y + V E W +I+ GT+ G+I
Sbjct: 95 VSQVSNYVNVRTEPNTTSDVVGKIYNNCAATILDTVDGEGGKWYRIQ--SGTVNGYIKAQ 152
Query: 114 LL-----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ K++ V K + + L ++P+++S + + + G++
Sbjct: 153 YFITGAEAEKKAREVGTTYAKVAHTATLRLRQEPNLESATLDLLSSDAEYEVIGQEGDFY 212
Query: 169 FGYNL-DTEGWIKKQKI 184
D G++ K +
Sbjct: 213 KISVDTDLVGYVFKDYV 229
>gi|262275010|ref|ZP_06052821.1| arylsulfatase [Grimontia hollisae CIP 101886]
gi|262221573|gb|EEY72887.1| arylsulfatase [Grimontia hollisae CIP 101886]
Length = 204
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 21/145 (14%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L LA+ LA A + + I ++ GPG Y ++ + + G
Sbjct: 4 LFSALAVLMMLAVPAAYAKDNYISDELFT-----------YMHSGPGTQYRIIGS-VDAG 51
Query: 86 LPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS--AIVSPWNRKTNNPIYINLYKK 141
V VV N + QI D G GW+ +S + V + +
Sbjct: 52 TKVTVVDSNRNAGYSQIIDDRGRKGWVETKYVSNQPGLKIRVPALEEELKQVKEALARAQ 111
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGE 166
D ++ G++ ++ + + +
Sbjct: 112 GDTEAKT-----KGLITSLEQRNAQ 131
>gi|116249922|ref|YP_765760.1| hypothetical protein RL0155 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254570|emb|CAK05644.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 216
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ P + VA V G + IR C + WC GW+ Q + +Y
Sbjct: 32 VNMRAGPSTRYPAVAVVPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVY 86
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
N R GP Y V + G VE+ NW + + G GW++ +
Sbjct: 32 VNMRAGPSTRYPAVAV-VPAGSSVEIRGCLSNVNWCDVEFYGG-RGWVSGQYV 82
>gi|168207349|ref|ZP_02633354.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
gi|170661319|gb|EDT14002.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
Length = 335
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 21/117 (17%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + + V +Y W I + G G+++K + + A N
Sbjct: 233 GDKFRIKW----------VDSDYLGWYYIE-YQGITGYVSKDYVEKLQMATT------CN 275
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFG-YNLDTEGWIKKQKI 184
+N+ + + S IVA + PG + I + W G++K +
Sbjct: 276 VDSVLNVRAEGNTSSNIVATINPGEVFRIDWVDSDFIGWYRITTANGATGFVKSDFV 332
>gi|325293562|ref|YP_004279426.1| hypothetical protein AGROH133_07698 [Agrobacterium sp. H13-3]
gi|325061415|gb|ADY65106.1| hypothetical protein AGROH133_07698 [Agrobacterium sp. H13-3]
Length = 199
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 13/57 (22%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+++ P + G + C WC GW +
Sbjct: 27 ATTASDVSVRSGPGEDYPELGLATRGSNAVLDGCMDGSSWCRIEVNGLRGWAHADYL 83
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSL 114
V AS + R GPG Y + T+G + + W +I +G GW +
Sbjct: 25 MVATTASDVSVRSGPGEDYPELGL-ATRGSNAVLDGCMDGSSWCRIE-VNGLRGWAHADY 82
Query: 115 LS 116
L+
Sbjct: 83 LN 84
>gi|228984106|ref|ZP_04144292.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775634|gb|EEM24014.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 351
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-----NK 112
V ++ + N R GPG Y+V+ + K V+ E W I G WI
Sbjct: 213 VYVEGTNINVRKGPGTNYSVI-LQINKSESYAVLSEKNGWLNI----GDNQWIKYDPSYI 267
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
L + + + +R + + YK P + VA GV+
Sbjct: 268 RLDTKENVSSSIVGHRVLSKVDNLRFYKSPSWEDKDVA----GVV 308
>gi|217326674|ref|ZP_03442757.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|217319041|gb|EEC27466.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
Length = 163
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|183220041|ref|YP_001838037.1| M23 family metalloendopeptidase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910162|ref|YP_001961717.1| metalloendoprotease [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774838|gb|ABZ93139.1| Metalloendoprotease [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778463|gb|ABZ96761.1| Putative metalloendopeptidase, M23B family; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 517
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 46/146 (31%)
Query: 80 TYLTKGLPVEVV----------KEYENWRQIRDFDGTIGWINKSLL-------------- 115
+ KG P+EVV KE +W +R G+I + LL
Sbjct: 122 VKIKKGDPLEVVLVLKQDVTDKKEGSHWVLVRTKSKKEGYITQDLLQPTKPTVKSRNTEG 181
Query: 116 ---------SGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S +A V+ + N +N+ +PD+ ++A++ G ++I
Sbjct: 182 NSLDLSALPSRTTNANVTDVKKGKEMWVNASSLNMRGEPDVNGYVIARLPKGQKVSIESS 241
Query: 164 S----------GEWCFGYNLDTEGWI 179
+ W + GW+
Sbjct: 242 TTNEETIDGISSNWYQVSSAYGNGWV 267
>gi|29378451|gb|AAO83927.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGRTGYVNGKYLTD 141
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 142 KATSTPVVQQEVKKE 156
>gi|260061447|ref|YP_003194527.1| BatE, TRP domain containing protein [Robiginitalea biformata
HTCC2501]
gi|88785579|gb|EAR16748.1| BatE, TRP domain containing protein [Robiginitalea biformata
HTCC2501]
Length = 244
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
LA + + +P F A R P L +G V+V +WR+
Sbjct: 168 LAYLQHRAYLQDQPAIIF----AGEVAVRTEPNRGSETAFQ-LHEGTKVQVRDSLADWRK 222
Query: 100 IRDFDGTIGWINKSLL 115
I DG GW+ L
Sbjct: 223 IELEDGQTGWMPAEAL 238
>gi|330899381|gb|EGH30800.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330972394|gb|EGH72460.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330975958|gb|EGH76024.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 224
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + + A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFAVSRRLLGAGLVGAALT-VVMPGSAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|288869986|ref|ZP_06112473.2| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
gi|288868890|gb|EFD01189.1| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
Length = 555
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S+ N R GI ++ T + KG V V++ E W ++R DG IG++ L G R
Sbjct: 167 VADSKGNVREKGGIKSPII-TRVEKGSEVTVLETMEKWDKVRTVDGYIGYVEHKRLGGSR 225
Query: 120 S 120
S
Sbjct: 226 S 226
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYI--NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLD 174
KR + + W+ +T N+ +K I+S I+ +VE G +T+ E +W
Sbjct: 152 KRVFVNNDWSEETKAVADSKGNVREKGGIKSPIITRVEKGSEVTVLETMEKWDKVRTVDG 211
Query: 175 TEGWIKKQKIWG 186
G+++ +++ G
Sbjct: 212 YIGYVEHKRLGG 223
>gi|226309752|ref|YP_002769646.1| hypothetical protein BBR47_01650 [Brevibacillus brevis NBRC 100599]
gi|226092700|dbj|BAH41142.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 319
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 13/110 (11%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLSGKRSAIVSPWNRKTN--NPI 134
G VEVV+E W Q+ ++ G GWI L+ A V +K
Sbjct: 76 GTRVEVVEEQGEWSQVLIPDQTTNKNATGYPGWIPSRQLAPWSDAFVVQQGQKLAMVTAA 135
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ + +A + L + E +G+W + +G + K +
Sbjct: 136 FTRLHTADKKPDLELAFLTK---LPLIEETGDWVTVATPNGKGLLPKADV 182
>gi|305665947|ref|YP_003862234.1| TRP domain-containing protein BatE [Maribacter sp. HTCC2170]
gi|88710722|gb|EAR02954.1| BatE, TRP domain containing protein [Maribacter sp. HTCC2170]
Length = 252
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 23 QNSLIFTLAIYF--YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + I + A F +A I A + +P F + + P +
Sbjct: 157 RIAFIGSFACLFVSIIAVIFAFIQYSDFSSDQPAIVFDS----EVRIKAEPNKRSEQIFI 212
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
L +G V V++E W++I+ DG GW+
Sbjct: 213 -LHEGTKVNVLEELNEWKKIKIVDGKTGWV 241
>gi|237741337|ref|ZP_04571818.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 4_1_13]
gi|256846482|ref|ZP_05551939.1| glutaminase [Fusobacterium sp. 3_1_36A2]
gi|229430869|gb|EEO41081.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 4_1_13]
gi|256718251|gb|EEU31807.1| glutaminase [Fusobacterium sp. 3_1_36A2]
Length = 155
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQI-----RDFDGTIGWINKSLL-- 115
AN R I ++ + V+V + +W + R + G+I++S L
Sbjct: 31 ANLRREAAIDSEII---VELDNSVQVSSFFKRGDWYYVEVLGMRPPEYARGFIHESQLKF 87
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + I ++ Y N+ +P + S +V + G +T G+W +
Sbjct: 88 SSETYVI-------SSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVGDWYYIEFTAY 140
Query: 176 E-GWIKKQKI 184
G+I K ++
Sbjct: 141 NYGYIHKSQL 150
>gi|34762530|ref|ZP_00143527.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887808|gb|EAA24879.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 148
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQI-----RDFDGTIGWINKSLL-- 115
AN R I ++ + V+V + +W + R + G+I++S L
Sbjct: 24 ANLRREAAIDSEII---VELDNSVQVSSFFKRGDWYYVEVLGMRPPEYARGFIHESQLKF 80
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + I ++ Y N+ +P + S +V + G +T G+W +
Sbjct: 81 SSETYVI-------SSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVGDWYYIEFTAY 133
Query: 176 E-GWIKKQKI 184
G+I K ++
Sbjct: 134 NYGYIHKSQL 143
>gi|328953862|ref|YP_004371196.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454186|gb|AEB10015.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 227
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 46 KEIFEKKPLPR------FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ P PR +VT A+R N R PG+ + T L + VE + E + W Q
Sbjct: 40 QAAPPSTPAPRVEYQILYVT--ATRLNLRACPGMDCPKIAT-LQRNQEVEKLAESQGWIQ 96
Query: 100 IRDF-DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+R DG +GW++ L A P +
Sbjct: 97 VRSRQDGVLGWVDSRYLGTAPVAETQAPPVIVEQPAPV 134
>gi|84501004|ref|ZP_00999239.1| hypothetical protein OB2597_02677 [Oceanicola batsensis HTCC2597]
gi|84391071|gb|EAQ03489.1| hypothetical protein OB2597_02677 [Oceanicola batsensis HTCC2597]
Length = 282
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTE--GWI 179
++ +N+ P + +VA+ G + C GE WC + + GW
Sbjct: 39 QVTGVSSNDTLNIRSGPGTSNRVVARAPNGAVFRNLGCRGEGNARWCHLETPNGQISGWA 98
Query: 180 KKQKI 184
+ +
Sbjct: 99 SGRYL 103
>gi|182627194|ref|ZP_02954902.1| bacteriocin [Clostridium perfringens D str. JGS1721]
gi|177907407|gb|EDT70093.1| bacteriocin [Clostridium perfringens D str. JGS1721]
Length = 878
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GPG Y + L +G V +V + W +I G+++ +
Sbjct: 599 NVRKGPGTNYDSIGQ-LNQGDNVSIVAKNGEWYKISSP--IAGYVHSDFI 645
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++N+ K P + ++ G ++I +GEW + G++ I
Sbjct: 597 FLNVRKGPGTNYDSIGQLNQGDNVSIVAKNGEWYKISSP-IAGYVHSDFI 645
>gi|223041477|ref|ZP_03611680.1| hypothetical protein AM202_0096 [Actinobacillus minor 202]
gi|223017735|gb|EEF16142.1| hypothetical protein AM202_0096 [Actinobacillus minor 202]
Length = 202
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 12/99 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ SL + F L L I E R G G Y +
Sbjct: 1 MTKSLRKAVIASFLLGSTLPAFSADYITENL-----------STYMRKGAGDQYKISGA- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ G + V+ + + +RD GW+ S +S S
Sbjct: 49 IQAGEKITVLDRKDRFVLVRDSRNREGWVLASEISQTAS 87
>gi|254472138|ref|ZP_05085538.1| Bacterial SH3 domain family protein [Pseudovibrio sp. JE062]
gi|211958421|gb|EEA93621.1| Bacterial SH3 domain family protein [Pseudovibrio sp. JE062]
Length = 202
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI-WGI 187
+N+ P + ++ + G ++ I C +G WC GW+ + I +G+
Sbjct: 46 TTTGVNMRTGPGTKYPVITTIPAGGVVFINYCTKNGSWCDLTFRGAPGWVSARYIRYGV 104
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
++D + ++ + + LA LA I+ + + N R G
Sbjct: 2 AVDCSEQQEGVIMKIIAWVLAGLVLLAVIIYSNAAFAQSGH------AGYTTTGVNMRTG 55
Query: 71 PGIMYTVVCTYLTKGLP-VEVVKEYENWRQIRDFDGTIGWINKSLL 115
PG Y V+ T G+ + + +W + F G GW++ +
Sbjct: 56 PGTKYPVITTIPAGGVVFINYCTKNGSWCDLT-FRGAPGWVSARYI 100
>gi|320119731|gb|ADW15964.1| invasion associated protein [Listeria innocua]
Length = 214
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 65 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 123
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 124 KATSTPVVQQEVKKE 138
>gi|297519301|ref|ZP_06937687.1| putative signal transduction protein [Escherichia coli OP50]
Length = 178
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|78062750|ref|YP_372658.1| SH3 domain-containing protein [Burkholderia sp. 383]
gi|77970635|gb|ABB12014.1| uncharacterized protein with a SH3 domain [Burkholderia sp. 383]
Length = 275
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
++ L+ P +VA++ PG L + C + WC GWI
Sbjct: 22 IAQAQSTGYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q I
Sbjct: 82 AQLI 85
>gi|154247788|ref|YP_001418746.1| SH3 type 3 domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154161873|gb|ABS69089.1| SH3 type 3 domain protein [Xanthobacter autotrophicus Py2]
Length = 298
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
R + L P + + ++ G +T+ C WC D G++ K +
Sbjct: 240 GRTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCK-SWCEVSVGDKRGFVYKAAV 296
>gi|320119737|gb|ADW15967.1| invasion associated protein [Listeria innocua]
gi|320119739|gb|ADW15968.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 66 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 124
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 125 KATSTPVVQQEVKKE 139
>gi|307945424|ref|ZP_07660760.1| putative DNA translocase FtsK [Roseibium sp. TrichSKD4]
gi|307771297|gb|EFO30522.1| putative DNA translocase FtsK [Roseibium sp. TrichSKD4]
Length = 352
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 17/86 (19%)
Query: 116 SGKRSAIVSPWNRKTNNP-----------------IYINLYKKPDIQSIIVAKVEPGVLL 158
S +R+A V+P +N+ + S ++A V G +
Sbjct: 263 SAERTAKVTPAKEPVQTQPKATTSTAANGPSGRITSAVNMRRSAQNGSTVLAVVPTGANV 322
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
T+ C WC G++ ++ +
Sbjct: 323 TVNSCDKWWCSITFESKTGYVARRFV 348
>gi|228473246|ref|ZP_04058001.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
33624]
gi|228275396|gb|EEK14188.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
33624]
Length = 254
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ KIL + FTL + +L + + + + + + P
Sbjct: 151 CYYFLEKILYKRIFFTLMVVAFLGSVSSFFLGRTVSHYVHSNHYGILFDKEVRLYEQPNT 210
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
Y+ L +G VE++ +++ W +++ DG IGW
Sbjct: 211 -YSKEVFSLHEGAKVEILDQFKEWYKLKVADGRIGW 245
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+G ++ L S V + + LY++P+ S V + G + I + E
Sbjct: 173 LGSVSSFFLGRTVSHYVHSNHYGILFDKEVRLYEQPNTYSKEVFSLHEGAKVEILDQFKE 232
Query: 167 WCFGYNLDTE-GWIKKQKI 184
W D GW KK +
Sbjct: 233 WYKLKVADGRIGWAKKHSL 251
>gi|296271198|ref|YP_003653830.1| SH3 type 3 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296093985|gb|ADG89937.1| SH3 type 3 domain protein [Thermobispora bispora DSM 43833]
Length = 222
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 20/139 (14%)
Query: 62 ASRANSRIGPGIMYTVVCTYLT--KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
S N R GPG+ + + + +P W Q+R G G+ + L R
Sbjct: 82 TSHLNVRSGPGLDHPPIAALAPGDRSIP-GACSASRGWIQVRTPGGKPGFASARYL---R 137
Query: 120 SAIVSPWN------------RKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSG 165
I P ++N+ + P + +A + G V+ G
Sbjct: 138 RVIPLPAPGTYDFAGCSYRVSGVRPTSHLNVRRGPGLDHPPIATLPAGGRVIGGCGAQHG 197
Query: 166 EWCFGYNLDTEGWIKKQKI 184
GW +
Sbjct: 198 WIPVRSADGVPGWAAASFL 216
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
S N R GPG+ + + T G + W +R DG GW S L +R+A
Sbjct: 163 TSHLNVRRGPGLDHPPIATLPAGGRVIGGCGAQHGWIPVRSADGVPGWAAASFL--RRTA 220
>gi|283787183|ref|YP_003367048.1| hypothetical protein ROD_35991 [Citrobacter rodentium ICC168]
gi|282950637|emb|CBG90309.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ + R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELSTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N+ Q++D G WI L+ S + + +
Sbjct: 55 QVTLLQTDNNYGQVKDSTGRTAWIPLKELNTSPSLRTRVPDLENQVKTLTD 105
>gi|225012030|ref|ZP_03702467.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-2A]
gi|225003585|gb|EEG41558.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-2A]
Length = 265
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ + F L++ I + + + +++ ++ + +++ + P
Sbjct: 164 FLNASQLKRIFFLLSLVSLALFISSFAITFSVNQQQKNTQYAILFSNKIDIWSEPNQRGE 223
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ T L +G +E+++ + W +IR +G+ GWI + L
Sbjct: 224 IQFT-LHEGTKIELLESLDEWNKIRIANGSEGWIKNADL 261
>gi|325924736|ref|ZP_08186173.1| SH3 domain-containing protein [Xanthomonas perforans 91-118]
gi|325544828|gb|EGD16174.1| SH3 domain-containing protein [Xanthomonas perforans 91-118]
Length = 223
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGW 178
A+ + + L P + V +V+PG L + C SG WC + + GW
Sbjct: 4 ALPVWAQHTGHANGLVGLRAGPSEEYRRVGEVQPGGTLQVYGCLDSGAWCDVRSPEARGW 63
Query: 179 IKKQKI 184
+ I
Sbjct: 64 LPAASI 69
>gi|326426920|gb|EGD72490.1| hypothetical protein PTSG_00516 [Salpingoeca sp. ATCC 50818]
Length = 6014
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 10/110 (9%)
Query: 81 YLTKGLPVEVVKEYENWRQIR-----DFDGTIGWI----NKSLLSGKRSAIVSPWNRKTN 131
+ G + V+ +W ++ GW+ +L + W T
Sbjct: 2345 QVEPGDVLRVLVCQGSWMRVEVKRATTPGLVDGWLPISTAAPMLRVVHTRERMQWFVVTQ 2404
Query: 132 NPI-YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ L I + ++A++ PG +L +R W W
Sbjct: 2405 AAAPALELRNAARITAPVLARMLPGDILHVRRVVSGWAEVPWGARTAWAP 2454
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLD------TEGWIKKQ 182
IV +VEPG +L + C G W +GW+
Sbjct: 2342 IVGQVEPGDVLRVLVCQGSWMRVEVKRATTPGLVDGWLPIS 2382
>gi|219849024|ref|YP_002463457.1| peptidase M23 [Chloroflexus aggregans DSM 9485]
gi|219543283|gb|ACL25021.1| Peptidase M23 [Chloroflexus aggregans DSM 9485]
Length = 466
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK-ASRANSRIGPGIMY 75
+ P L+N + F LA S E+E + V I A+ N R GP +
Sbjct: 221 FAPNRLRNGQLIVGQEIFIPGGRLAWSPEQEAAFAQRKAEPVGIVLANETNVRSGPSTDH 280
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ LT G V + Y +W + + TIGWI LL
Sbjct: 281 QRL-AQLTAGRQVALRGRYGDWVLVALGE-TIGWIRSDLL 318
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A++ G + +R G+W +T GWI+ +
Sbjct: 267 ANETNVRSGPSTDHQRLAQLTAGRQVALRGRYGDWVLVALGETIGWIRSDLL 318
>gi|328545125|ref|YP_004305234.1| N-acetylmuramoyl-L-alanine amidase, family 3 [polymorphum gilvum
SL003B-26A1]
gi|326414867|gb|ADZ71930.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Polymorphum gilvum
SL003B-26A1]
Length = 380
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Query: 45 EKEIFEKKPLP-------RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
E E P+P R + ++ N R GPG V+ V V W
Sbjct: 300 EVFPDEAAPVPADYVATHRVYSQQSGYLNLRSGPGNDRPVIMRMDNGTEVVMVSDSVRGW 359
Query: 98 RQIRDFDGTIGWINKSLL 115
+I DG GW L
Sbjct: 360 VRILTADGQQGWAYSRYL 377
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG-YNLDTEGWIK 180
V+ + Y+NL P ++ +++ G ++ + + W +GW
Sbjct: 314 VATHRVYSQQSGYLNLRSGPGNDRPVIMRMDNGTEVVMVSDSVRGWVRILTADGQQGWAY 373
Query: 181 KQKI 184
+ +
Sbjct: 374 SRYL 377
>gi|300113102|ref|YP_003759677.1| SH3 type 3 domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539039|gb|ADJ27356.1| SH3 type 3 domain protein [Nitrosococcus watsonii C-113]
Length = 310
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-----DFDGTIGWINKSLL 115
N R GPG+ + V+ ++K + +++ +W ++ + + +GW + L
Sbjct: 228 NLRSGPGVDHDVIGI-ISKNQKLMELEQDRDWTKVEYFDHINNENVVGWAHSRYL 281
>gi|160893005|ref|ZP_02073793.1| hypothetical protein CLOL250_00543 [Clostridium sp. L2-50]
gi|156865088|gb|EDO58519.1| hypothetical protein CLOL250_00543 [Clostridium sp. L2-50]
Length = 442
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 116 SGKRSAIVSPWNRKTNNP-------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ K++ + + + +N+ ++ S IV K+ G + + E SGEW
Sbjct: 90 AQKKTVVAKAEEKSEFDGKFIAKINDTLNIREEATTDSNIVGKLFDGNVGDVLETSGEWT 149
Query: 169 FGYNLDTEGWIKKQKI 184
+ D G++ I
Sbjct: 150 KISSGDVIGYVNSDYI 165
>gi|75763616|ref|ZP_00743311.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218897222|ref|YP_002445633.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus G9842]
gi|228900845|ref|ZP_04065060.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 4222]
gi|74488898|gb|EAO52419.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218542374|gb|ACK94768.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus G9842]
gi|228858771|gb|EEN03216.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 4222]
Length = 328
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
SP + +NL P S ++ ++ P
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNP 294
>gi|114766025|ref|ZP_01445037.1| hypothetical protein 1100011001296_R2601_00195 [Pelagibaca
bermudensis HTCC2601]
gi|114541743|gb|EAU44782.1| hypothetical protein R2601_00195 [Roseovarius sp. HTCC2601]
Length = 274
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDT- 175
+ + P T + +++L + P S ++ + PG +L +R G W
Sbjct: 21 QPAVAFEPGYAATLDDRHLDLRRAPGFDSRVIGRPGPGTMLRVRAVRGGWVQLVDLGGIY 80
Query: 176 -EGWIKKQKIWGI 187
GW++ + G+
Sbjct: 81 PSGWVEASTLAGL 93
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 37/127 (29%), Gaps = 13/127 (10%)
Query: 34 FYLAPILALSHEKEIFEKKPLP-------RFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L PI A + P P T+ + R PG V+ G
Sbjct: 1 MTLFPIRAAMAALLLAVSMPQPAVAFEPGYAATLDDRHLDLRRAPGFDSRVIGR-PGPGT 59
Query: 87 PVEVVKEYENWRQIRDFDG--TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ V W Q+ D G GW+ S L+G R + L + D
Sbjct: 60 MLRVRAVRGGWVQLVDLGGIYPSGWVEASTLAGLGWV---DATRAAGTGEGMKLTRGTDT 116
Query: 145 QSIIVAK 151
+ +
Sbjct: 117 EGRPTGR 123
>gi|313144567|ref|ZP_07806760.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129598|gb|EFR47215.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 676
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 54/183 (29%)
Query: 55 PRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-RDF-------DG 105
P + +K++ N R P ++ L K V+V+++ W ++ D
Sbjct: 491 PAILAVKSNLGLNLRAKPSTDSAII-AKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQT 549
Query: 106 TIGWINKSLLSG---------------------KRSAIVSPWNRKTNNP----------I 134
G++ LS ++ + + K
Sbjct: 550 LQGYVISQALSNTLLPPQEQSQAQNTESTPQKTTKTPQSTEQDSKLEQKKTESYAKVIVN 609
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEWCFGYN--------LDTEGWIKK 181
+ KP SII+AK G + I E + +W Y + +G++ K
Sbjct: 610 TAMVRAKPSTDSIIIAKAPKGRKMQILSFEKGENNAQWAKIYYIFESQSGKREIQGYVAK 669
Query: 182 QKI 184
+ +
Sbjct: 670 RLL 672
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT------- 175
+P + + +NL KP S I+AK+ + + + G+W
Sbjct: 489 TAPAILAVKSNLGLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQ 548
Query: 176 --EGWIKKQKI 184
+G++ Q +
Sbjct: 549 TLQGYVISQAL 559
>gi|224438127|ref|ZP_03659062.1| hypothetical protein HcinC1_09115 [Helicobacter cinaedi CCUG 18818]
Length = 699
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 54/183 (29%)
Query: 55 PRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-RDF-------DG 105
P + +K++ N R P ++ L K V+V+++ W ++ D
Sbjct: 514 PAILAVKSNLGLNLRAKPSTDSAII-AKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQT 572
Query: 106 TIGWINKSLLSG---------------------KRSAIVSPWNRKTNNP----------I 134
G++ LS ++ + + K
Sbjct: 573 LQGYVISQALSNTLLPPQEQSQAQNTESTPQKTTKTPQSTEQDSKLEQKKTESYAKVIVN 632
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEWCFGYN--------LDTEGWIKK 181
+ KP SII+AK G + I E + +W Y + +G++ K
Sbjct: 633 TAMVRAKPSTDSIIIAKAPKGRKMQILSFEKGENNAQWAKIYYIFESQSGKREIQGYVAK 692
Query: 182 QKI 184
+ +
Sbjct: 693 RLL 695
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT------- 175
+P + + +NL KP S I+AK+ + + + G+W
Sbjct: 512 TAPAILAVKSNLGLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQ 571
Query: 176 --EGWIKKQKI 184
+G++ Q +
Sbjct: 572 TLQGYVISQAL 582
>gi|160939828|ref|ZP_02087175.1| hypothetical protein CLOBOL_04719 [Clostridium bolteae ATCC
BAA-613]
gi|158437262|gb|EDP15027.1| hypothetical protein CLOBOL_04719 [Clostridium bolteae ATCC
BAA-613]
Length = 540
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 8/133 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD--FDGTIGWINKSLL 115
T+ A N R P + V KG V + W QI + + SL
Sbjct: 176 ATVTADNLNIRQAPALDPGNVIGQALKGERYVVKGLEDGWIQIEEGYISSEYAEVAYSLN 235
Query: 116 SGKRSAIVSPWNRKTNN------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
G++ + + + +N Y+N+ ++P I+ K+ I E W
Sbjct: 236 EGRKMDMKAMAINQYDNLVISKVNNYLNVRQEPKSDGKIIGKMTSKAAGEILETLDGWYK 295
Query: 170 GYNLDTEGWIKKQ 182
+ G+I
Sbjct: 296 IKSGPIIGYISAD 308
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P I+ K+ I G+W + EG+I Q +
Sbjct: 109 YLNIRETPSTDGKIIGKLSGDGACEILATEGDWSHITSGGVEGYISNQYL 158
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-- 113
++ + N R P ++ T G E+++ + W +I+ IG+I+
Sbjct: 255 ISKVNNYLNVRQEPKSDGKIIGKMTSKAAG---EILETLDGWYKIK-SGPIIGYISADPQ 310
Query: 114 -LLSGKRS---AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+G+ + A+ + + N +N+ +P+ ++ I ++ + W
Sbjct: 311 YTATGQEAKDIAMQNATLKAVINTDVLNVRTEPNTEAKIWTQIVKDERYPVVAQLDGWVE 370
Query: 170 GYNLDTE 176
+
Sbjct: 371 IDLDSVD 377
>gi|331082949|ref|ZP_08332069.1| hypothetical protein HMPREF0992_00993 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330399944|gb|EGG79602.1| hypothetical protein HMPREF0992_00993 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 254
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 21/44 (47%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ + Q ++A++ + G+WC+ + + G++
Sbjct: 49 LNIREGAGTQHPVLAQLPKNGYCEVERREGDWCYITSDEISGYV 92
>gi|312170981|emb|CBX79240.1| Uncharacterized protein ygiM precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 206
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
+R GPG Y +V T L G VE++++ +N + QIRD +G WI + LS + S
Sbjct: 36 ARSGPGNDYRLVGT-LNAGEEVELLQKNDNTKYGQIRDSEGKTTWIPLAQLSEQPS 90
>gi|298292121|ref|YP_003694060.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928632|gb|ADH89441.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 989
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
LAL+ + + ++ AN R GPG Y V+ T L G P++VV NW
Sbjct: 7 LALASGLVVAGTLVAGAWPSMTTRNANVRGGPGTAYGVLGT-LPAGSPLDVVSCTGNWC- 64
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ G+I+ LL + + Y +P
Sbjct: 65 ----ETQYGYISAGLLGQGAAGYGAAPGYAPAYAGTGTSYGQP 103
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + AN R GPG+ Y V+ T L G PV VV +W Q G+I+ LLS
Sbjct: 323 VTTANANVRGGPGMNYGVLGT-LPAGSPVSVVACTGSWCQT-----QYGYISARLLSQ-- 374
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSI 147
N P Y Y
Sbjct: 375 ----GGAGYAGNVPGYAPAYAGTGTNYR 398
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A + AP AL + L S N R GPG Y V+ T L G PV+V
Sbjct: 732 APRYLGAPGAALDSAGGAYTATTL--------SNLNVRSGPGTSYEVLGT-LPAGSPVDV 782
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
V +W Q G+++ L+G +
Sbjct: 783 VGCSGSWCQT-----QFGYVSARHLNGAGT 807
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 36/132 (27%), Gaps = 18/132 (13%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP--- 87
A+ P PR + N R GPG+ Y V K LP
Sbjct: 144 AVRSAAGPHDPTEDHPGSNTTMAGPR---TTIGQTNVRSGPGVDYPVT-----KTLPDFT 195
Query: 88 -VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
VEV W Q G+I+ LLS V + P +
Sbjct: 196 KVEVTNCANAWCQT-----NEGYISIYLLSRGPVQQVLTSEAQPRVPGSQT-RDSIAWNA 249
Query: 147 IIVAKVEPGVLL 158
A + G
Sbjct: 250 ATQAAMGYGAPG 261
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 36/132 (27%), Gaps = 18/132 (13%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP--- 87
A+ P PR + N R GPG+ Y V K LP
Sbjct: 450 AVRSAAGPHDPTEDHPGSNTTMAGPR---TTIGQTNVRSGPGVDYPVT-----KTLPDFT 501
Query: 88 -VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
VEV W Q G+I+ LLS V + P +
Sbjct: 502 KVEVTNCANAWCQT-----NEGYISIYLLSRGPVQQVLTSEAQPRVPGSQT-RDSIAWNA 555
Query: 147 IIVAKVEPGVLL 158
A + G
Sbjct: 556 ATQAAMGYGAPG 567
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +N+ P ++ + G + + CSG WC G++ +
Sbjct: 746 AGGAYTATTLSNLNVRSGPGTSYEVLGTLPAGSPVDVVGCSGSWCQTQF----GYVSARH 801
Query: 184 IWGIYPG 190
+ G
Sbjct: 802 LNGAGTD 808
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
N R GPG+ Y V+ T L G PV +V +W Q
Sbjct: 630 VNVRGGPGVAYGVLGT-LPAGSPVNIVSCTGSWCQ 663
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P ++ + G L + C+G WC G+I +
Sbjct: 28 TTRNANVRGGPGTAYGVLGTLPAGSPLDVVSCTGNWCETQY----GYISAGLL 76
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P + ++ + G + I C+G WC G++ + +
Sbjct: 630 VNVRGGPGVAYGVLGTLPAGSPVNIVSCTGSWCQTQY----GYVSARHV 674
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+A N+ P + ++ + G +++ C+G WC G+I
Sbjct: 312 TAGAYGAGGGAVTTANANVRGGPGMNYGVLGTLPAGSPVSVVACTGSWCQTQY----GYI 367
Query: 180 KKQKI 184
+ +
Sbjct: 368 SARLL 372
>gi|260589521|ref|ZP_05855434.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
gi|260540089|gb|EEX20658.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
Length = 254
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 21/44 (47%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ + Q ++A++ + G+WC+ + + G++
Sbjct: 49 LNIREGAGTQHPVLAQLPKNGYCEVERREGDWCYITSDEISGYV 92
>gi|114762968|ref|ZP_01442398.1| hypothetical protein 1100011001344_R2601_20851 [Pelagibaca
bermudensis HTCC2601]
gi|114544292|gb|EAU47300.1| hypothetical protein R2601_20851 [Roseovarius sp. HTCC2601]
Length = 225
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 22/103 (21%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRK-----------TNNPIYINLYKKPDIQSII 148
+ + +G LL G +A + T +N+ +P QS +
Sbjct: 23 VVEPEGDG----FRLLGGGVTATLVAQEPAPDLGEASYVIVTGVDAALNIRAEPGTQSGV 78
Query: 149 VAKVEPGVLLTIRECSGE----WCFGY---NLDTEGWIKKQKI 184
A+ G ++ C WC + TEGW +
Sbjct: 79 RARASLGRVMQSEGCEDRPDRLWCRVRFLDSSGTEGWAAADYL 121
>gi|320119733|gb|ADW15965.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++++ T + G V V E W +I DG G++N L+
Sbjct: 66 SVSATWLNVRSGAGVDHSIL-TSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTD 124
Query: 118 KRSAIVSPWNRKTNN 132
K ++
Sbjct: 125 KATSTPVVKQEVKKE 139
>gi|313773012|gb|EFS38978.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL074PA1]
Length = 229
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + +N+ P + + + G E G W GW +
Sbjct: 30 AKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRT 89
Query: 183 KIWG 186
+ G
Sbjct: 90 HLTG 93
>gi|313820878|gb|EFS58592.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA1]
gi|314976792|gb|EFT20887.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL045PA1]
Length = 232
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + +N+ P + + + G E G W GW +
Sbjct: 33 AKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRT 92
Query: 183 KIWG 186
+ G
Sbjct: 93 HLTG 96
>gi|256824268|ref|YP_003148228.1| transglycosylase family protein [Kytococcus sedentarius DSM 20547]
gi|256687661|gb|ACV05463.1| transglycosylase family protein [Kytococcus sedentarius DSM 20547]
Length = 274
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 7/112 (6%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R N R GPG+ + V L G +E K W ++ +G W S G +
Sbjct: 160 TDRVNYRSGPGMSHAVTGKLLP-GTTIEGTKLASGW--VKTTEGKYFW--HSF--GTTDS 212
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +P +N+ P + I+ + G + + S W
Sbjct: 213 VDTPDPGTYTIKRGVNVRSGPGMSYSILGQYSAGATVAGEKLSSGWVKTDRG 264
>gi|330718279|ref|ZP_08312879.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc fallax KCTC 3537]
Length = 288
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFE-KKPLPRFVTIKASRANSRIGPG 72
++K++ L ++ + + F + +L H EI + +P R GPG
Sbjct: 2 IKKWLLSNLIGIIMSVVILIFTFGLLYSLLHRNEIITEPQNIP-----------LRTGPG 50
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSL 114
I Y+ L + + ++ + W ++R D GWI L
Sbjct: 51 IAYSQK-EKLKRHTKLHILSKRHGWYKVRCSDNEKVGWIAGWL 92
>gi|313831004|gb|EFS68718.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL007PA1]
gi|315083411|gb|EFT55387.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA2]
Length = 231
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + +N+ P + + + G E G W GW +
Sbjct: 32 AKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRT 91
Query: 183 KIWG 186
+ G
Sbjct: 92 HLTG 95
>gi|313905034|ref|ZP_07838404.1| NLP/P60 protein [Eubacterium cellulosolvens 6]
gi|313470104|gb|EFR65436.1| NLP/P60 protein [Eubacterium cellulosolvens 6]
Length = 523
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIKK 181
V P +N+ + D + IV ++ G L + G+ W + + D G++K
Sbjct: 294 VVPKVYAIALSDDVNIRESADDSARIVGTMKAGALSYVLAAKGQKWVYVESGDVRGFVKS 353
Query: 182 QKI 184
K+
Sbjct: 354 SKL 356
>gi|292486911|ref|YP_003529781.1| hypothetical protein EAMY_0423 [Erwinia amylovora CFBP1430]
gi|292900694|ref|YP_003540063.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291200542|emb|CBJ47671.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291552328|emb|CBA19373.1| Uncharacterized protein ygiM precursor [Erwinia amylovora CFBP1430]
Length = 206
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
+R GPG Y +V T L G VE++++ +N + QIRD +G WI + LS + S
Sbjct: 36 ARSGPGNDYRLVGT-LNAGEEVELLQKNDNTKYGQIRDSEGKTTWIPLAQLSEQPS 90
>gi|329298666|ref|ZP_08256002.1| SH3 domain-containing protein [Plautia stali symbiont]
Length = 207
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
I A+ +A +H + R+++ + R GPG Y +V L
Sbjct: 4 ITLAALSLLAFSAIAPAHAADEK------RYIS---DELSTWVRSGPGDQYRLVGK-LNA 53
Query: 85 GLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
G V +++ + + QIRD +G WI S LS S
Sbjct: 54 GEEVTLLQTNNDSQYAQIRDAEGKTNWIPLSQLSASPS 91
>gi|255535335|ref|YP_003095706.1| peptidase [Flavobacteriaceae bacterium 3519-10]
gi|255341531|gb|ACU07644.1| peptidase [Flavobacteriaceae bacterium 3519-10]
Length = 367
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K +++K +P +KA N R GPG + ++ T K V V+ W I+ G
Sbjct: 299 KPVYKKAAVPAGKAVKAGS-NLRAGPGTQFEIIATLDEK-TAVNVLAGDGAWYHIKTVSG 356
Query: 106 TIGWINKSL 114
T G+++ SL
Sbjct: 357 TEGFVSSSL 365
>gi|77462240|ref|YP_351744.1| hypothetical protein RSP_1695 [Rhodobacter sphaeroides 2.4.1]
gi|77386658|gb|ABA77843.1| hypothetical protein RSP_1695 [Rhodobacter sphaeroides 2.4.1]
Length = 193
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A P+LA + E + R VT A N R GP Y VV L G V V
Sbjct: 104 AETRAPQPVLAAATVAETRQPAGEVRHVT--ADAVNVRSGPSTAYPVVGRVLR-GDAVLV 160
Query: 91 VK-EYENWRQIR-DFDGTIGWINKSLLS 116
+ +W IR + DG G++ L+
Sbjct: 161 DGPQEGSWAPIRIEGDGVSGYMAARFLA 188
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
+N+ P +V +V G +L G W G++ + +
Sbjct: 132 TADAVNVRSGPSTAYPVVGRVLRGDAVLVDGPQEGSWAPIRIEGDGVSGYMAARFL 187
>gi|157372525|ref|YP_001480514.1| putative signal transduction protein [Serratia proteamaculans 568]
gi|157324289|gb|ABV43386.1| SH3 domain protein [Serratia proteamaculans 568]
Length = 206
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 17/103 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
+Q + LA+ + A + +K R+++ N GPG Y +V
Sbjct: 1 MQKLRLICLAVLSFSITWGAHAEDK---------RYIS---DELNTYVHSGPGNQYRIVG 48
Query: 80 TYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRS 120
T L G V ++ + N+ QIRD G WI LS S
Sbjct: 49 T-LNAGEEVTLLSVNDSTNYGQIRDAKGRNTWIPLDQLSQTPS 90
>gi|117618349|ref|YP_855317.1| arylsulfatase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559756|gb|ABK36704.1| arylsulfatase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 201
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L I L AL+ R+V+ GPG Y ++ + + G P
Sbjct: 3 ALLGILICLCAQQALADT----------RYVS-DNIFTFIHNGPGTQYRILGS-VKAGEP 50
Query: 88 VEV--VKEYENWRQIRDFDGTIGWINKSLLSGK 118
++V V + Q+ D G GWI S L G+
Sbjct: 51 LDVKAVNNEAGFTQVVDGRGREGWIKSSELQGE 83
>gi|256422361|ref|YP_003123014.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
gi|256037269|gb|ACU60813.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
Length = 140
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V ++S N R GPG ++ K + V K + W IR DG G+ + L
Sbjct: 79 VVTQSSNLNVRKGPGTDQPIIGKAGHKEIVSLVSKHSDQWWLIRTKDGEEGYAHAQYL 136
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDTEG 177
+A+ +N+ K P I+ K ++++ + W EG
Sbjct: 70 TAVEGAKLEVVTQSSNLNVRKGPGTDQPIIGKAGHKEIVSLVSKHSDQWWLIRTKDGEEG 129
Query: 178 WIKKQKI 184
+ Q +
Sbjct: 130 YAHAQYL 136
>gi|146308118|ref|YP_001188583.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina ymp]
gi|145576319|gb|ABP85851.1| SH3, type 3 domain protein [Pseudomonas mendocina ymp]
Length = 200
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVE 89
+ A H +E + R+V+ N R GP Y +V T LT G VE
Sbjct: 1 MLLGSLLGAASLHAEESASNQ---RWVS---DSLNTYVRSGPTDGYRIVGT-LTSGQKVE 53
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLL 115
+++ ++ Q+R G WI L
Sbjct: 54 LLRTQGDYSQVRSEGGNAVWIPSRDL 79
>gi|314986405|gb|EFT30497.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA2]
Length = 226
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + +N+ P + + + G E G W GW +
Sbjct: 27 AKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRT 86
Query: 183 KIWG 186
+ G
Sbjct: 87 HLTG 90
>gi|313109602|ref|ZP_07795551.1| putative SH3 domain-containing protein [Pseudomonas aeruginosa
39016]
gi|310882053|gb|EFQ40647.1| putative SH3 domain-containing protein [Pseudomonas aeruginosa
39016]
Length = 222
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + +P L + + + L +LA + E R+V+ + R GP
Sbjct: 1 MSLSRRIPAAL-SPFLNRVIGACLLGGLLAAGAPAQAEEATGNARWVS-DSLTTFVRSGP 58
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
Y +V T LT G VE++ N+ Q+R +G+ WI L
Sbjct: 59 TDGYRIVGT-LTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|226948479|ref|YP_002803570.1| glycosyl hydrolase, family 18 [Clostridium botulinum A2 str. Kyoto]
gi|226843979|gb|ACO86645.1| glycosyl hydrolase, family 18 [Clostridium botulinum A2 str. Kyoto]
Length = 504
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|170757787|ref|YP_001780836.1| glycosy hydrolase family protein [Clostridium botulinum B1 str.
Okra]
gi|169122999|gb|ACA46835.1| glycosyl hydrolase, family 18 [Clostridium botulinum B1 str. Okra]
Length = 504
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|168178632|ref|ZP_02613296.1| glycosyl hydrolase, family 18 [Clostridium botulinum NCTC 2916]
gi|182671198|gb|EDT83172.1| glycosyl hydrolase, family 18 [Clostridium botulinum NCTC 2916]
Length = 504
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|153940681|ref|YP_001390560.1| glycosy hydrolase family protein [Clostridium botulinum F str.
Langeland]
gi|152936577|gb|ABS42075.1| glycosyl hydrolase, family 18 [Clostridium botulinum F str.
Langeland]
gi|295318641|gb|ADF99018.1| glycosyl hydrolase, family 18 [Clostridium botulinum F str. 230613]
Length = 504
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|148379194|ref|YP_001253735.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. ATCC
3502]
gi|153933381|ref|YP_001383571.1| glycosy hydrolase family protein [Clostridium botulinum A str. ATCC
19397]
gi|153935085|ref|YP_001387120.1| glycosy hydrolase family protein [Clostridium botulinum A str.
Hall]
gi|148288678|emb|CAL82759.1| putative chitinase/spore peptidoglycan hydrolase [Clostridium
botulinum A str. ATCC 3502]
gi|152929425|gb|ABS34925.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. ATCC
19397]
gi|152930999|gb|ABS36498.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. Hall]
Length = 504
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|126668122|ref|ZP_01739084.1| SH3 domain protein [Marinobacter sp. ELB17]
gi|126627392|gb|EAZ98027.1| SH3 domain protein [Marinobacter sp. ELB17]
Length = 223
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + + ++ + + A + + +K LP R G G + ++
Sbjct: 1 MTPFRLLVVLVFVFSSIAAAQARTVWVDDKIYLP-----------VRSGAGSQFRIIENA 49
Query: 82 LTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINLY 139
+ G +E++ + + ++R GT GW++ LS +A R+ +
Sbjct: 50 VPSGTAMELLESDQNGYSKVRTTKGTEGWVSSQYLSSTPIAATQLKKARQDLETAQAEVR 109
Query: 140 KKPDIQSIIVAK 151
+ D+ + + +
Sbjct: 110 QMQDVLANVTGE 121
>gi|82778388|ref|YP_404737.1| putative signal transduction protein [Shigella dysenteriae Sd197]
gi|81242536|gb|ABB63246.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 206
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|218778928|ref|YP_002430246.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760312|gb|ACL02778.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 333
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLL 115
+V + A N R GPG + + + +EV+ W +R GW++ + +
Sbjct: 266 WVQVTAPNLNVRTGPGYDFPIK-EVAPQYCQLEVMGGSTGGWVYVRISGENFGWVSTAYV 324
>gi|221369383|ref|YP_002520479.1| hypothetical protein RSKD131_3546 [Rhodobacter sphaeroides KD131]
gi|221162435|gb|ACM03406.1| Hypothetical Protein RSKD131_3546 [Rhodobacter sphaeroides KD131]
Length = 221
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C + +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
N R GPG YT+V + V V + W ++ + +GT GW L+
Sbjct: 35 NLRSGPGSNYTIVGV-IPSDALVMVEGCVDAAKWCRV-NHEGTSGWAAGDYLA 85
>gi|39995821|ref|NP_951772.1| hypothetical protein GSU0715 [Geobacter sulfurreducens PCA]
gi|39982585|gb|AAR34045.1| hypothetical protein GSU0715 [Geobacter sulfurreducens PCA]
gi|298504832|gb|ADI83555.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 269
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 12/97 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA-----NSRIGPGIMYTVV 78
NS+ A + L P+P +K+ N R G G + VV
Sbjct: 177 NSMDAAAATFIPLVAQTLAQLTGGTAPSAPVP----LKSGEVVASSLNVRAGRGTEFPVV 232
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
L +G+ V V + + W +I + W+ + L
Sbjct: 233 -KGLKRGVRVNVFETADGWVRIHPTEQQ--WVAERYL 266
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
L G + P +N+ + +V ++ GV + + E + W +
Sbjct: 195 AQLTGGTAPSAPVPLKSGEVVASSLNVRAGRGTEFPVVKGLKRGVRVNVFETADGWVRIH 254
Query: 172 NLDTEGWIKKQKI 184
+ + W+ ++ +
Sbjct: 255 PTEQQ-WVAERYL 266
>gi|291528570|emb|CBK94156.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale M104/1]
Length = 411
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R + G+ + W +I+ G++ + A
Sbjct: 95 SDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQ-SGSVTGYVKGDYVVVGDDA 153
Query: 122 IVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYNLDTEGW 178
+V R+ + + + ++ V L + E + W D G+
Sbjct: 154 LVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGY 213
Query: 179 IKKQKI 184
+ +
Sbjct: 214 VSTDYV 219
>gi|291523967|emb|CBK89554.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale DSM 17629]
Length = 411
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R + G+ + W +I+ G++ + A
Sbjct: 95 SDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQ-SGSVTGYVKGDYVVVGDDA 153
Query: 122 IVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYNLDTEGW 178
+V R+ + + + ++ V L + E + W D G+
Sbjct: 154 LVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGY 213
Query: 179 IKKQKI 184
+ +
Sbjct: 214 VSTDYV 219
>gi|238923117|ref|YP_002936630.1| NLP/P60 family protein [Eubacterium rectale ATCC 33656]
gi|238874789|gb|ACR74496.1| NLP/P60 family protein [Eubacterium rectale ATCC 33656]
Length = 411
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R + G+ + W +I+ G++ + A
Sbjct: 95 SDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQ-SGSVTGYVKGDYVVVGDDA 153
Query: 122 IVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYNLDTEGW 178
+V R+ + + + ++ V L + E + W D G+
Sbjct: 154 LVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGY 213
Query: 179 IKKQKI 184
+ +
Sbjct: 214 VSTDYV 219
>gi|149376755|ref|ZP_01894513.1| SH3 domain protein [Marinobacter algicola DG893]
gi|149358994|gb|EDM47460.1| SH3 domain protein [Marinobacter algicola DG893]
Length = 248
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y ++ + + G +E+++ E + ++R DG GW+ L+ A
Sbjct: 60 IRSGEGTQYRILHSGVRSGTSLELLETSESGYSRVRTPDGIEGWMVSRYLTDTPIA 115
>gi|229011528|ref|ZP_04168714.1| Cell wall hydrolase/autolysin [Bacillus mycoides DSM 2048]
gi|228749683|gb|EEL99522.1| Cell wall hydrolase/autolysin [Bacillus mycoides DSM 2048]
Length = 328
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRS 120
N R GP +V+ P V +E W + G W+ S ++ ++
Sbjct: 206 VNLRSGPSTSSSVI---RQLNAPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKT 258
Query: 121 AIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ SP +NL P S ++ K+
Sbjct: 259 SNSDGSPIGVAYIQGTNVNLRSGPSTSSSVIRKLN 293
>gi|229059925|ref|ZP_04197299.1| Cell wall hydrolase/autolysin [Bacillus cereus AH603]
gi|228719338|gb|EEL70942.1| Cell wall hydrolase/autolysin [Bacillus cereus AH603]
Length = 333
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRS 120
N R GP +V+ P V +E W + G W+ S ++ ++
Sbjct: 211 VNLRSGPSTSSSVI---RQLNAPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKT 263
Query: 121 AIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ SP +NL P S ++ K+
Sbjct: 264 SNSDGSPIGVAYIQGTNVNLRSGPSTSSSVIRKLN 298
>gi|332994541|gb|AEF04596.1| SH3, type 3 [Alteromonas sp. SN2]
Length = 200
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS 116
GPG Y ++ + + G P+ V+ + + Q+ D +G GW+ ++
Sbjct: 40 IFLHTGPGRNYRILGS-VEAGTPITVLDRDADAEFTQVTDDEGRKGWVESKYVT 92
>gi|206973174|ref|ZP_03234096.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
gi|206732058|gb|EDZ49258.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
Length = 537
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
I N R G G Y+VV +KG V+V +E W + GT W+
Sbjct: 478 AEINGIGVNVRSGAGTSYSVV-RKASKGEKVKVYEEKNGWLRF----GTDEWVYH 527
>gi|71735582|ref|YP_275587.1| hypothetical protein PSPPH_3429 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289627739|ref|ZP_06460693.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647419|ref|ZP_06478762.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71556135|gb|AAZ35346.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|330866398|gb|EGH01107.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 224
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFAVSRRLLGAGLFGAALT-VVVPGNAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|229060187|ref|ZP_04197556.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
gi|228719069|gb|EEL70681.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
Length = 76
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
VTI S N R GPG Y V+ L+K V KE W I G W+ +
Sbjct: 16 VTITGSGVNPRKGPGTTYEVI-RKLSKNESYSVYKEQNGWLSI----GDEQWVYYA 66
>gi|266623537|ref|ZP_06116472.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
gi|288864678|gb|EFC96976.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
Length = 541
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 11/128 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWI-NKSLLSG-- 117
+ N R P +V + E++ E W +I G G+I ++ +L+G
Sbjct: 119 SGYLNVRKEPNTSADIVGKLMG-DSACEILDSTQEGWYKIS-SGGIEGYIDSQYVLTGDE 176
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K A R +N+ K+ + S +V + + + W
Sbjct: 177 AKTKAYDLVSLRAIVQVDNLNIRKEANTTSDVVGQGLLNERYEVIDQLDGWVQI----PS 232
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 233 GYMSADYV 240
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 10/129 (7%)
Query: 63 SRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-LSGKR 119
+ N R P ++ G +E W +I+ G++ L+G+
Sbjct: 272 NYLNVREEPSENGKIIAKMPSKAAGNILETTD--NGWYKIQ-SGKITGYVKSDYILTGQP 328
Query: 120 S---AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
+ A+ N +N +P S I ++ + + W D+
Sbjct: 329 AKDEALKVAELMAIVNTDMLNARSEPSTDSKIWTQISNNEKYPVLKQIDGWVEIELEEDS 388
Query: 176 EGWIKKQKI 184
++ +
Sbjct: 389 NAYVASDYV 397
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 6/112 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N+R P + T ++ V+K+ + W +I + + ++ + R
Sbjct: 343 VNTDMLNARSEPSTDSKI-WTQISNNEKYPVLKQIDGWVEIELEEDSNAYVASDYVD-VR 400
Query: 120 SAI---VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
A+ + + +L + + + P V G C
Sbjct: 401 YALPEAIKFSPLEEKANAAASLRTQ-IVNYALQFLGNPYVWGGTSLTKGADC 451
>gi|314933796|ref|ZP_07841161.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus caprae
C87]
gi|313653946|gb|EFS17703.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus caprae
C87]
Length = 291
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
L L+ ++ ++ + I + + F + A R
Sbjct: 8 LTRHGLKNWLTLVVVIAFILFIILLFMFLNQGDEDTGQITIT------------ENAELR 55
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
GP Y ++ + KG + V + W ++++ GT GW+
Sbjct: 56 TGPNAAYPIIYK-IEKGDSFKKVDKQGKWIEVQNRAGTEKGWVAGW 100
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ I+ K+E G + G+W +GW+
Sbjct: 52 AELRTGPNAAYPIIYKIEKGDSFKKVDKQGKWIEVQNRAGTEKGWVA 98
>gi|257484977|ref|ZP_05639018.1| hypothetical protein PsyrptA_17071 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|298487881|ref|ZP_07005921.1| hypothetical protein PSA3335_3339 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157606|gb|EFH98686.1| hypothetical protein PSA3335_3339 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330892087|gb|EGH24748.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv. mori
str. 301020]
gi|331011018|gb|EGH91074.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 224
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFAVSRRLLGAGLFGAALT-VVVPGNAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|223044142|ref|ZP_03614181.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus capitis SK14]
gi|222442536|gb|EEE48642.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus capitis SK14]
Length = 291
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
L L+ ++ ++ + I + + F + A R
Sbjct: 8 LTRHGLKNWLTLVVVIAFILFIILLFMFLNQGDEDTGQITIT------------ENAELR 55
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
GP Y ++ + KG + V + W ++++ GT GW+
Sbjct: 56 TGPNAAYPIIYK-IEKGDSFKKVDKQGKWIEVQNRAGTEKGWVAGW 100
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ I+ K+E G + G+W +GW+
Sbjct: 52 AELRTGPNAAYPIIYKIEKGDSFKKVDKQGKWIEVQNRAGTEKGWVA 98
>gi|153008984|ref|YP_001370199.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151560872|gb|ABS14370.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 198
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--W 167
+ S+++ + + INL P Q + + GV +T+ C+ W
Sbjct: 5 VKSSIVTLALLVSTNAYASSAIVTSTINLRVGPGTQYGTIGAIPNGVGITVAGCTSGYGW 64
Query: 168 CFGYNLDTEGWIKKQKI 184
C GW I
Sbjct: 65 CQVTYGGMTGWAASSYI 81
>gi|23099854|ref|NP_693320.1| hypothetical protein OB2399 [Oceanobacillus iheyensis HTE831]
gi|22778085|dbj|BAC14355.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 150
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 22/61 (36%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + N +N+ P I + G ++ + + EW D G++ +
Sbjct: 85 TVEEERIVNADLLNVRSGPSTDHQISGTLATGDIVNVYDDGNEWVEIEYEDVTGYVNRDF 144
Query: 184 I 184
+
Sbjct: 145 L 145
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ A N R GP + + T L G V V + W +I ++ G++N+ L
Sbjct: 92 VNADLLNVRSGPSTDHQISGT-LATGDIVNVYDDGNEWVEIE-YEDVTGYVNRDFLD 146
>gi|217033571|ref|ZP_03438999.1| hypothetical protein HP9810_899g7 [Helicobacter pylori 98-10]
gi|216943917|gb|EEC23351.1| hypothetical protein HP9810_899g7 [Helicobacter pylori 98-10]
Length = 174
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + + N R P ++ + L K V+V++ +W +I
Sbjct: 101 TPTTPTIGKKPLEYKVAV--NSVNVRAFPSTKGKILGS-LAKDKSVKVLEIQNDWAKIEF 157
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 158 SNKTKGYVFLKLLKK 172
>gi|302344472|ref|YP_003809001.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
gi|301641085|gb|ADK86407.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
Length = 246
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VT+ A N R GP V+ L +G + VV W + +G GW++++ +
Sbjct: 178 VTVMAPSLNVRGGPSHNQVVILV-LNQGEVLSVVGSVPGWLYVVLPNGQYGWVDQNYTT 235
>gi|257125495|ref|YP_003163609.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049434|gb|ACV38618.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 279
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 13/74 (17%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL---------- 173
W + Y N+ +KP S IV K+E + +G+W + Y
Sbjct: 201 IKWYEVNSKDGYANMREKPSTNSKIVTKLENKETVKYIMANGDWYYVYIDEHSTNPDENY 260
Query: 174 ---DTEGWIKKQKI 184
+ G++ K ++
Sbjct: 261 KVTEFRGFVHKSQL 274
>gi|269836954|ref|YP_003319182.1| NLP/P60 protein [Sphaerobacter thermophilus DSM 20745]
gi|269786217|gb|ACZ38360.1| NLP/P60 protein [Sphaerobacter thermophilus DSM 20745]
Length = 427
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 44/132 (33%), Gaps = 14/132 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVK------EYENWRQIRDFDGTIGWINKSLLSGK 118
N R G ++ T +++ + V+ + W + +GT+GWI L+
Sbjct: 49 VNLRGAVGYDAPILFT-VSEATTINVIGGPNTAPDGSVWYNVE-VNGTLGWIVSDYLTLP 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI------RECSGEWCFGYN 172
A + + L + P + + + + G +++ + W
Sbjct: 107 PLAAGQVAIVSGTDGHGLRLREAPSLSAATLTVMPEGAEVSVAGPEQTDDQGMTWAHVSY 166
Query: 173 LDTEGWIKKQKI 184
G+ + +
Sbjct: 167 GGLTGYAARSYL 178
>gi|317493724|ref|ZP_07952141.1| SH3 domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918051|gb|EFV39393.1| SH3 domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 205
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 17/103 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
+ + L + + A + EK R+++ N GPG Y +V
Sbjct: 1 MHKFRLVCLTLLAACFTLNAHAEEK---------RYIS---DELNTYVHSGPGNQYRIVG 48
Query: 80 TYLTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
T L G VE+ V + Q+RD G W+ LS + S
Sbjct: 49 T-LNAGEEVELLSVNADNKYGQVRDAKGRTVWLPMEQLSTEPS 90
>gi|293412432|ref|ZP_06655155.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469203|gb|EFF11694.1| conserved hypothetical protein [Escherichia coli B354]
Length = 207
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 7 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 55
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 56 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 91
>gi|260576308|ref|ZP_05844300.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259021576|gb|EEW24880.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 156
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVT------------IKASRANSRIGPGIMYTVVC 79
I AP++A+ E + PL + V + AS N R+GP V+
Sbjct: 53 ITPRPAPVIAVRAEAAAPLQMPLVQPVAEAAPEPAPQVWYVNASTVNVRLGPSTETDVLG 112
Query: 80 TYLTKGLPVEVVKEYEN-WRQIR-DFDGTIGWINKSLLS 116
L++G VV + W QIR + DG G++ + L+
Sbjct: 113 K-LSRGEAATVVAVSGDGWAQIRIEGDGIEGYVAERFLT 150
>gi|289583357|ref|YP_003481767.1| NLP/P60 protein [Natrialba magadii ATCC 43099]
gi|289532855|gb|ADD07205.1| NLP/P60 protein [Natrialba magadii ATCC 43099]
Length = 385
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + S +T +++ P+ + V K G LT + WC GW
Sbjct: 95 TVLESLAVPRTTRRRVVSVRGDPEEDAEQVTKALYGEALTAYDGRDGWCRVRTADGYLGW 154
Query: 179 IKKQKI 184
+ ++ +
Sbjct: 155 VDEEAL 160
>gi|110643299|ref|YP_671029.1| putative signal transduction protein [Escherichia coli 536]
gi|157158504|ref|YP_001464515.1| putative signal transduction protein [Escherichia coli E24377A]
gi|191168825|ref|ZP_03030600.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193062114|ref|ZP_03043210.1| conserved hypothetical protein [Escherichia coli E22]
gi|193067322|ref|ZP_03048290.1| conserved hypothetical protein [Escherichia coli E110019]
gi|209920526|ref|YP_002294610.1| putative signal transduction protein [Escherichia coli SE11]
gi|218696760|ref|YP_002404427.1| putative signal transduction protein [Escherichia coli 55989]
gi|218706680|ref|YP_002414199.1| putative signal transduction protein [Escherichia coli UMN026]
gi|256019029|ref|ZP_05432894.1| putative signal transduction protein [Shigella sp. D9]
gi|260845809|ref|YP_003223587.1| putative signal transduction protein [Escherichia coli O103:H2 str.
12009]
gi|260857185|ref|YP_003231076.1| putative signal transduction protein [Escherichia coli O26:H11 str.
11368]
gi|260869807|ref|YP_003236209.1| putative signal transduction protein [Escherichia coli O111:H- str.
11128]
gi|293406668|ref|ZP_06650594.1| signal transduction protein [Escherichia coli FVEC1412]
gi|293449393|ref|ZP_06663814.1| signal transduction protein [Escherichia coli B088]
gi|298382408|ref|ZP_06992005.1| signal transduction protein [Escherichia coli FVEC1302]
gi|300818820|ref|ZP_07099026.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300821647|ref|ZP_07101793.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300901436|ref|ZP_07119521.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300923715|ref|ZP_07139741.1| hypothetical protein HMPREF9548_01908 [Escherichia coli MS 182-1]
gi|301325595|ref|ZP_07219061.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|307310320|ref|ZP_07589968.1| SH3 domain protein [Escherichia coli W]
gi|309793619|ref|ZP_07688045.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|331669921|ref|ZP_08370766.1| putative SH3 domain protein [Escherichia coli TA271]
gi|331679131|ref|ZP_08379803.1| putative SH3 domain protein [Escherichia coli H591]
gi|332280129|ref|ZP_08392542.1| conserved hypothetical protein [Shigella sp. D9]
gi|110344891|gb|ABG71128.1| hypothetical protein YgiM precursor [Escherichia coli 536]
gi|157080534|gb|ABV20242.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|190901154|gb|EDV60928.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192932334|gb|EDV84932.1| conserved hypothetical protein [Escherichia coli E22]
gi|192959279|gb|EDV89714.1| conserved hypothetical protein [Escherichia coli E110019]
gi|209913785|dbj|BAG78859.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218353492|emb|CAU99604.1| putative signal transduction protein (SH3 domain) [Escherichia coli
55989]
gi|218433777|emb|CAR14694.1| putative signal transduction protein (SH3 domain) [Escherichia coli
UMN026]
gi|257755834|dbj|BAI27336.1| predicted signal transduction protein [Escherichia coli O26:H11
str. 11368]
gi|257760956|dbj|BAI32453.1| predicted signal transduction protein [Escherichia coli O103:H2
str. 12009]
gi|257766163|dbj|BAI37658.1| predicted signal transduction protein [Escherichia coli O111:H-
str. 11128]
gi|284923083|emb|CBG36176.1| conserved hypothetical protein [Escherichia coli 042]
gi|291322483|gb|EFE61912.1| signal transduction protein [Escherichia coli B088]
gi|291426674|gb|EFE99706.1| signal transduction protein [Escherichia coli FVEC1412]
gi|298277548|gb|EFI19064.1| signal transduction protein [Escherichia coli FVEC1302]
gi|300355138|gb|EFJ71008.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300420029|gb|EFK03340.1| hypothetical protein HMPREF9548_01908 [Escherichia coli MS 182-1]
gi|300525785|gb|EFK46854.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300528605|gb|EFK49667.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300847567|gb|EFK75327.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|306909215|gb|EFN39710.1| SH3 domain protein [Escherichia coli W]
gi|308122576|gb|EFO59838.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|315062363|gb|ADT76690.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli W]
gi|320174937|gb|EFW50054.1| Arylsulfatase [Shigella dysenteriae CDC 74-1112]
gi|320201965|gb|EFW76540.1| Arylsulfatase [Escherichia coli EC4100B]
gi|323154510|gb|EFZ40710.1| hypothetical protein ECEPECA14_3555 [Escherichia coli EPECa14]
gi|323163105|gb|EFZ48938.1| hypothetical protein ECE128010_0701 [Escherichia coli E128010]
gi|323173700|gb|EFZ59329.1| hypothetical protein ECLT68_2018 [Escherichia coli LT-68]
gi|323178760|gb|EFZ64336.1| hypothetical protein ECOK1180_2492 [Escherichia coli 1180]
gi|323183638|gb|EFZ69035.1| hypothetical protein ECOK1357_3418 [Escherichia coli 1357]
gi|323377049|gb|ADX49317.1| SH3 domain protein [Escherichia coli KO11]
gi|323946765|gb|EGB42784.1| SH3 domain-containing protein [Escherichia coli H120]
gi|323966584|gb|EGB62017.1| SH3 domain-containing protein [Escherichia coli M863]
gi|323978872|gb|EGB73952.1| SH3 domain-containing protein [Escherichia coli TW10509]
gi|324018180|gb|EGB87399.1| hypothetical protein HMPREF9542_03156 [Escherichia coli MS 117-3]
gi|324119663|gb|EGC13544.1| SH3 domain-containing protein [Escherichia coli E1167]
gi|325498612|gb|EGC96471.1| putative signal transduction protein [Escherichia fergusonii
ECD227]
gi|327251841|gb|EGE63527.1| hypothetical protein ECSTEC7V_3693 [Escherichia coli STEC_7v]
gi|331062834|gb|EGI34748.1| putative SH3 domain protein [Escherichia coli TA271]
gi|331073196|gb|EGI44519.1| putative SH3 domain protein [Escherichia coli H591]
gi|332102481|gb|EGJ05827.1| conserved hypothetical protein [Shigella sp. D9]
Length = 206
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|294501367|ref|YP_003565067.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
gi|294351304|gb|ADE71633.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
Length = 300
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V +++ P I K+ L++ + G+W + + D +GW+ K+
Sbjct: 25 VPVHQPIIVTADSLHVRSGPGRSFSITNKLTKNTRLSVSDRQGDWYYVESSDIQGWVFKK 84
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
P+ + + + A + R GPG +++ LTK + V +W + D GW+
Sbjct: 24 NVPVHQPIIVTADSLHVRSGPGRSFSIT-NKLTKNTRLSVSDRQGDWYYVESSD-IQGWV 81
Query: 111 NKSLL 115
K
Sbjct: 82 FKKFT 86
>gi|255264191|ref|ZP_05343533.1| SH3, type 3 domain protein, putative [Thalassiobium sp. R2A62]
gi|255106526|gb|EET49200.1| SH3, type 3 domain protein, putative [Thalassiobium sp. R2A62]
Length = 231
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKG 85
F AI +A + E K+ R V + ++ N R P ++ +
Sbjct: 33 TFVAAIGLLMAVGVPGVAEPIQPMKEVFYRVVDVASNDVLNIRAQPTSRSEIIGAFHHNH 92
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINK 112
EV W ++ + GW++
Sbjct: 93 PLFEVNGRDGRWVRVNLGE-YSGWVHS 118
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ +P +S I+ L + G W + GW+ I
Sbjct: 65 DVASNDVLNIRAQPTSRSEIIGAFHHNHPLFEVNGRDGRWVRVNLGEYSGWVHSGYI 121
>gi|229587341|ref|YP_002860379.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium botulinum Ba4 str. 657]
gi|229260390|gb|ACQ51427.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium botulinum Ba4 str. 657]
Length = 187
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 20 KILQNSLIFTLAIYFYLAPI--LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
KI SL I F L I + + +K + I S N R GPG Y
Sbjct: 2 KIFSRSLKKLCMIVFLLTFIGIVGMQSDKAYAYSTGSTFTIYITTSDVNIRKGPGTSYES 61
Query: 78 VCTYLTKGLPV---EVVKEYENWRQ---IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ K + +V + W + ++ G+I S L S NR
Sbjct: 62 YGV-VPKYTAIDTGQVKETSGGWSKVDMVKSGSVKTGYIKSSYLRKSTS------NRFYK 114
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGV 156
+ + K P + V
Sbjct: 115 ATSNVKVRKGPGTSYSAITTVPKNA 139
>gi|229083699|ref|ZP_04216021.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-44]
gi|228699600|gb|EEL52263.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-44]
Length = 473
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ K + + + AS N R G ++ +L G V +V + W +IR
Sbjct: 1 MDPAKPTVPGQVIEERAVVNASLLNVRKGSSTETAIIG-HLKNGETVTIVAKENGWAKIR 59
Query: 102 DFDGTIGWINKSLLS---GKRSAIVSPWNRKTNNPIYIN 137
F G G+++ L G S + ++K P +
Sbjct: 60 -FSGGEGYVSLQFLKMKQGSSSYEIVTSSQKIQKPNEVE 97
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
R N +N+ K ++ I+ ++ G +TI W EG++
Sbjct: 15 ERAVVNASLLNVRKGSSTETAIIGHLKNGETVTIVAKENGWAKIRFSGGEGYV 67
>gi|221641195|ref|YP_002527457.1| SH3, type 3 domain-containing protein [Rhodobacter sphaeroides
KD131]
gi|221161976|gb|ACM02956.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides
KD131]
Length = 186
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A P+LA + E + R VT A N R GP Y VV L G V V
Sbjct: 97 AETRAPQPVLAAATVAETRQPAGEVRHVT--ADAVNVRSGPSTAYPVVGRVLR-GDAVLV 153
Query: 91 VK-EYENWRQIR-DFDGTIGWINKSLLS 116
+ +W IR + DG G++ L+
Sbjct: 154 DGPQEGSWAPIRIEGDGVAGYMAARFLA 181
>gi|78049299|ref|YP_365474.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037729|emb|CAJ25474.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 235
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGW 178
A+ + + L P + V +V+PG L + C SG WC + + GW
Sbjct: 16 ALPVWAQHTGHANSLVGLRAGPSEEYRRVGEVQPGGTLQVYGCLDSGAWCDVRSPEARGW 75
Query: 179 IKKQKI 184
+ I
Sbjct: 76 LPAASI 81
>gi|15833192|ref|NP_311965.1| signal transduction protein [Escherichia coli O157:H7 str. Sakai]
gi|16130951|ref|NP_417527.1| SH3 domain protein [Escherichia coli str. K-12 substr. MG1655]
gi|24114355|ref|NP_708865.1| putative signal transduction protein [Shigella flexneri 2a str.
301]
gi|26249636|ref|NP_755676.1| putative signal transduction protein [Escherichia coli CFT073]
gi|30064403|ref|NP_838574.1| putative signal transduction protein [Shigella flexneri 2a str.
2457T]
gi|74313591|ref|YP_312010.1| putative signal transduction protein [Shigella sonnei Ss046]
gi|89109825|ref|AP_003605.1| predicted signal transduction protein [Escherichia coli str. K-12
substr. W3110]
gi|91212483|ref|YP_542469.1| putative signal transduction protein [Escherichia coli UTI89]
gi|110806942|ref|YP_690462.1| putative signal transduction protein [Shigella flexneri 5 str.
8401]
gi|117625368|ref|YP_855259.1| putative signal transduction protein [Escherichia coli APEC O1]
gi|157162528|ref|YP_001459846.1| putative signal transduction protein [Escherichia coli HS]
gi|168747437|ref|ZP_02772459.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168754023|ref|ZP_02779030.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168760214|ref|ZP_02785221.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168767076|ref|ZP_02792083.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168773290|ref|ZP_02798297.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168781929|ref|ZP_02806936.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168785927|ref|ZP_02810934.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168797644|ref|ZP_02822651.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170018693|ref|YP_001723647.1| putative signal transduction protein [Escherichia coli ATCC 8739]
gi|170082598|ref|YP_001731918.1| signal transduction protein [Escherichia coli str. K-12 substr.
DH10B]
gi|170681115|ref|YP_001745327.1| putative signal transduction protein [Escherichia coli SMS-3-5]
gi|188493451|ref|ZP_03000721.1| conserved hypothetical protein [Escherichia coli 53638]
gi|191172515|ref|ZP_03034055.1| conserved hypothetical protein [Escherichia coli F11]
gi|194436900|ref|ZP_03069000.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|195937199|ref|ZP_03082581.1| putative signal transduction protein [Escherichia coli O157:H7 str.
EC4024]
gi|208808190|ref|ZP_03250527.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208814307|ref|ZP_03255636.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208821938|ref|ZP_03262258.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395813|ref|YP_002272528.1| hypothetical protein ECH74115_4367 [Escherichia coli O157:H7 str.
EC4115]
gi|215488386|ref|YP_002330817.1| putative signal transduction protein [Escherichia coli O127:H6 str.
E2348/69]
gi|218550308|ref|YP_002384099.1| signal transduction protein [Escherichia fergusonii ATCC 35469]
gi|218560142|ref|YP_002393055.1| signal transduction protein [Escherichia coli S88]
gi|218691360|ref|YP_002399572.1| putative signal transduction protein [Escherichia coli ED1a]
gi|218701826|ref|YP_002409455.1| putative signal transduction protein [Escherichia coli IAI39]
gi|227887778|ref|ZP_04005583.1| signal transduction protein [Escherichia coli 83972]
gi|237706184|ref|ZP_04536665.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238902166|ref|YP_002927962.1| putative signal transduction protein (SH3 domain) [Escherichia coli
BW2952]
gi|253772109|ref|YP_003034940.1| signal transduction protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038223|ref|ZP_04872281.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|254163002|ref|YP_003046110.1| putative signal transduction protein [Escherichia coli B str.
REL606]
gi|254795006|ref|YP_003079843.1| putative signal transduction protein [Escherichia coli O157:H7 str.
TW14359]
gi|256024364|ref|ZP_05438229.1| putative signal transduction protein [Escherichia sp. 4_1_40B]
gi|261228067|ref|ZP_05942348.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254923|ref|ZP_05947456.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli O157:H7 str. FRIK966]
gi|291284434|ref|YP_003501252.1| putative signal transduction protein [Escherichia coli O55:H7 str.
CB9615]
gi|293416494|ref|ZP_06659133.1| signal transduction protein [Escherichia coli B185]
gi|300905806|ref|ZP_07123540.1| hypothetical protein HMPREF9536_03798 [Escherichia coli MS 84-1]
gi|300917408|ref|ZP_07134074.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300931939|ref|ZP_07147236.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300937462|ref|ZP_07152288.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300950737|ref|ZP_07164625.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958440|ref|ZP_07170579.1| hypothetical protein HMPREF9547_04154 [Escherichia coli MS 175-1]
gi|300973245|ref|ZP_07172084.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|300977453|ref|ZP_07173916.1| hypothetical protein HMPREF9553_01047 [Escherichia coli MS 200-1]
gi|301021240|ref|ZP_07185272.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301021845|ref|ZP_07185808.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|301048109|ref|ZP_07195147.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|301301905|ref|ZP_07208039.1| hypothetical protein HMPREF9347_00468 [Escherichia coli MS 124-1]
gi|301644750|ref|ZP_07244725.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306816591|ref|ZP_07450723.1| putative signal transduction protein [Escherichia coli NC101]
gi|307139743|ref|ZP_07499099.1| putative signal transduction protein [Escherichia coli H736]
gi|312972682|ref|ZP_07786855.1| uncharacterized protein ygiM [Escherichia coli 1827-70]
gi|331643753|ref|ZP_08344884.1| putative SH3 domain protein [Escherichia coli H736]
gi|331648856|ref|ZP_08349944.1| putative SH3 domain protein [Escherichia coli M605]
gi|331654654|ref|ZP_08355654.1| putative SH3 domain protein [Escherichia coli M718]
gi|331659344|ref|ZP_08360286.1| putative SH3 domain protein [Escherichia coli TA206]
gi|331664668|ref|ZP_08365574.1| putative SH3 domain protein [Escherichia coli TA143]
gi|331674597|ref|ZP_08375357.1| putative SH3 domain protein [Escherichia coli TA280]
gi|331684706|ref|ZP_08385298.1| putative SH3 domain protein [Escherichia coli H299]
gi|83288007|sp|P0ADU0|YGIM_ECO57 RecName: Full=Uncharacterized protein ygiM; Flags: Precursor
gi|83288008|sp|P0ADT9|YGIM_ECOL6 RecName: Full=Uncharacterized protein ygiM; Flags: Precursor
gi|83288009|sp|P0ADT8|YGIM_ECOLI RecName: Full=Uncharacterized protein ygiM; Flags: Precursor
gi|83288010|sp|P0ADU1|YGIM_SHIFL RecName: Full=Uncharacterized protein ygiM; Flags: Precursor
gi|15529639|gb|AAL01383.1|AF407016_1 inner membrane protein [Escherichia coli]
gi|26110064|gb|AAN82250.1|AE016767_10 Hypothetical protein ygiM precursor [Escherichia coli CFT073]
gi|1203798|gb|AAA89135.1| alternate name ygiM; ORF_o206 [Escherichia coli str. K-12 substr.
MG1655]
gi|1789435|gb|AAC76091.1| SH3 domain protein [Escherichia coli str. K-12 substr. MG1655]
gi|13363411|dbj|BAB37361.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24053519|gb|AAN44572.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042660|gb|AAP18384.1| hypothetical protein S3301 [Shigella flexneri 2a str. 2457T]
gi|73857068|gb|AAZ89775.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|85675856|dbj|BAE77106.1| predicted signal transduction protein [Escherichia coli str. K12
substr. W3110]
gi|91074057|gb|ABE08938.1| hypothetical protein UTI89_C3491 [Escherichia coli UTI89]
gi|110616490|gb|ABF05157.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115514492|gb|ABJ02567.1| putative signal transduction protein (SH3 domain) [Escherichia coli
APEC O1]
gi|157068208|gb|ABV07463.1| conserved hypothetical protein [Escherichia coli HS]
gi|169753621|gb|ACA76320.1| SH3 domain protein [Escherichia coli ATCC 8739]
gi|169890433|gb|ACB04140.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli str. K-12 substr. DH10B]
gi|170518833|gb|ACB17011.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187770941|gb|EDU34785.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017941|gb|EDU56063.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188488650|gb|EDU63753.1| conserved hypothetical protein [Escherichia coli 53638]
gi|189000636|gb|EDU69622.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189358758|gb|EDU77177.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189363810|gb|EDU82229.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189369264|gb|EDU87680.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189374139|gb|EDU92555.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189379673|gb|EDU98089.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|190907183|gb|EDV66782.1| conserved hypothetical protein [Escherichia coli F11]
gi|194424382|gb|EDX40369.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208727991|gb|EDZ77592.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208735584|gb|EDZ84271.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208742061|gb|EDZ89743.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157213|gb|ACI34646.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209759348|gb|ACI77986.1| hypothetical protein ECs3938 [Escherichia coli]
gi|209759350|gb|ACI77987.1| hypothetical protein ECs3938 [Escherichia coli]
gi|209759352|gb|ACI77988.1| hypothetical protein ECs3938 [Escherichia coli]
gi|209759354|gb|ACI77989.1| hypothetical protein ECs3938 [Escherichia coli]
gi|209759356|gb|ACI77990.1| hypothetical protein ECs3938 [Escherichia coli]
gi|215266458|emb|CAS10896.1| predicted signal transduction protein (SH3domain) [Escherichia coli
O127:H6 str. E2348/69]
gi|218357849|emb|CAQ90493.1| putative signal transduction protein (SH3 domain) [Escherichia
fergusonii ATCC 35469]
gi|218366911|emb|CAR04682.1| putative signal transduction protein (SH3 domain) [Escherichia coli
S88]
gi|218371812|emb|CAR19667.1| putative signal transduction protein (SH3 domain) [Escherichia coli
IAI39]
gi|218428924|emb|CAR09873.2| putative signal transduction protein (SH3 domain) [Escherichia coli
ED1a]
gi|222034787|emb|CAP77529.1| Uncharacterized protein ygiM [Escherichia coli LF82]
gi|226839847|gb|EEH71868.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|226899224|gb|EEH85483.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227835174|gb|EEJ45640.1| signal transduction protein [Escherichia coli 83972]
gi|238863104|gb|ACR65102.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli BW2952]
gi|242378605|emb|CAQ33392.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli BL21(DE3)]
gi|253323153|gb|ACT27755.1| SH3 domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974903|gb|ACT40574.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli B str. REL606]
gi|253979059|gb|ACT44729.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli BL21(DE3)]
gi|254594406|gb|ACT73767.1| predicted signal transduction protein (SH3 domain) [Escherichia
coli O157:H7 str. TW14359]
gi|260447909|gb|ACX38331.1| SH3 domain protein [Escherichia coli DH1]
gi|281602444|gb|ADA75428.1| putative signal transduction protein [Shigella flexneri 2002017]
gi|290764307|gb|ADD58268.1| putative signal transduction protein [Escherichia coli O55:H7 str.
CB9615]
gi|291431850|gb|EFF04833.1| signal transduction protein [Escherichia coli B185]
gi|294490687|gb|ADE89443.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|299881598|gb|EFI89809.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300300029|gb|EFJ56414.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300308311|gb|EFJ62831.1| hypothetical protein HMPREF9553_01047 [Escherichia coli MS 200-1]
gi|300314881|gb|EFJ64665.1| hypothetical protein HMPREF9547_04154 [Escherichia coli MS 175-1]
gi|300397861|gb|EFJ81399.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300402405|gb|EFJ85943.1| hypothetical protein HMPREF9536_03798 [Escherichia coli MS 84-1]
gi|300410825|gb|EFJ94363.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|300415365|gb|EFJ98675.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300449974|gb|EFK13594.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457497|gb|EFK20990.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300460362|gb|EFK23855.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300842886|gb|EFK70646.1| hypothetical protein HMPREF9347_00468 [Escherichia coli MS 124-1]
gi|301076904|gb|EFK91710.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305850156|gb|EFM50615.1| putative signal transduction protein [Escherichia coli NC101]
gi|307555162|gb|ADN47937.1| putative signal transduction protein [Escherichia coli ABU 83972]
gi|307625330|gb|ADN69634.1| putative signal transduction protein [Escherichia coli UM146]
gi|309703486|emb|CBJ02826.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|310332624|gb|EFP99837.1| uncharacterized protein ygiM [Escherichia coli 1827-70]
gi|312947626|gb|ADR28453.1| putative signal transduction protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|313648171|gb|EFS12617.1| uncharacterized protein ygiM [Shigella flexneri 2a str. 2457T]
gi|315137649|dbj|BAJ44808.1| putative signal transduction protein [Escherichia coli DH1]
gi|315256966|gb|EFU36934.1| arylsulfatase [Escherichia coli MS 85-1]
gi|315288833|gb|EFU48231.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315295021|gb|EFU54358.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|315297759|gb|EFU57036.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|315617127|gb|EFU97736.1| uncharacterized protein ygiM [Escherichia coli 3431]
gi|320189406|gb|EFW64065.1| Arylsulfatase [Escherichia coli O157:H7 str. EC1212]
gi|320195217|gb|EFW69846.1| Arylsulfatase [Escherichia coli WV_060327]
gi|320640128|gb|EFX09700.1| SH3 domain-containing protein [Escherichia coli O157:H7 str. G5101]
gi|320645426|gb|EFX14435.1| SH3 domain-containing protein [Escherichia coli O157:H- str.
493-89]
gi|320650737|gb|EFX19194.1| SH3 domain-containing protein [Escherichia coli O157:H- str. H
2687]
gi|320656115|gb|EFX24027.1| SH3 domain-containing protein [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661805|gb|EFX29213.1| SH3 domain-containing protein [Escherichia coli O55:H7 str. USDA
5905]
gi|320666956|gb|EFX33932.1| SH3 domain-containing protein [Escherichia coli O157:H7 str.
LSU-61]
gi|323168101|gb|EFZ53788.1| hypothetical protein SS53G_1582 [Shigella sonnei 53G]
gi|323188501|gb|EFZ73786.1| hypothetical protein ECRN5871_2920 [Escherichia coli RN587/1]
gi|323935943|gb|EGB32238.1| SH3 domain-containing protein [Escherichia coli E1520]
gi|323941847|gb|EGB38026.1| SH3 domain-containing protein [Escherichia coli E482]
gi|323951411|gb|EGB47286.1| SH3 domain-containing protein [Escherichia coli H252]
gi|323957784|gb|EGB53498.1| SH3 domain-containing protein [Escherichia coli H263]
gi|323960975|gb|EGB56593.1| SH3 domain-containing protein [Escherichia coli H489]
gi|323971822|gb|EGB67047.1| SH3 domain-containing protein [Escherichia coli TA007]
gi|324005361|gb|EGB74580.1| hypothetical protein HMPREF9532_05015 [Escherichia coli MS 57-2]
gi|324011998|gb|EGB81217.1| hypothetical protein HMPREF9533_03985 [Escherichia coli MS 60-1]
gi|324115362|gb|EGC09326.1| hypothetical protein ERIG_00238 [Escherichia fergusonii B253]
gi|326337758|gb|EGD61592.1| Arylsulfatase [Escherichia coli O157:H7 str. 1125]
gi|326347323|gb|EGD71048.1| Arylsulfatase [Escherichia coli O157:H7 str. 1044]
gi|330909121|gb|EGH37635.1| arylsulfatase [Escherichia coli AA86]
gi|331037224|gb|EGI09448.1| putative SH3 domain protein [Escherichia coli H736]
gi|331042603|gb|EGI14745.1| putative SH3 domain protein [Escherichia coli M605]
gi|331048036|gb|EGI20113.1| putative SH3 domain protein [Escherichia coli M718]
gi|331053926|gb|EGI25955.1| putative SH3 domain protein [Escherichia coli TA206]
gi|331058599|gb|EGI30580.1| putative SH3 domain protein [Escherichia coli TA143]
gi|331068691|gb|EGI40086.1| putative SH3 domain protein [Escherichia coli TA280]
gi|331078321|gb|EGI49527.1| putative SH3 domain protein [Escherichia coli H299]
gi|332345009|gb|AEE58343.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332752728|gb|EGJ83113.1| hypothetical protein SFK671_3686 [Shigella flexneri K-671]
gi|332753111|gb|EGJ83495.1| hypothetical protein SF434370_3290 [Shigella flexneri 4343-70]
gi|332754417|gb|EGJ84783.1| hypothetical protein SF274771_3663 [Shigella flexneri 2747-71]
gi|332765304|gb|EGJ95528.1| hypothetical protein SF293071_3615 [Shigella flexneri 2930-71]
gi|332998658|gb|EGK18254.1| hypothetical protein SFVA6_3939 [Shigella flexneri VA-6]
gi|332999815|gb|EGK19399.1| hypothetical protein SFK272_3899 [Shigella flexneri K-272]
gi|333000072|gb|EGK19655.1| hypothetical protein SFK218_4074 [Shigella flexneri K-218]
gi|333014766|gb|EGK34111.1| hypothetical protein SFK304_3892 [Shigella flexneri K-304]
gi|333015683|gb|EGK35022.1| hypothetical protein SFK227_3585 [Shigella flexneri K-227]
Length = 206
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|229017571|ref|ZP_04174466.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1273]
gi|229023788|ref|ZP_04180273.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1272]
gi|228737473|gb|EEL87983.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1272]
gi|228743714|gb|EEL93819.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1273]
Length = 333
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 12/120 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 211 VNLRSGPSTSSSVI-RQLNSQESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 265
Query: 123 VSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +NL P S ++ K+ + W + W+
Sbjct: 266 SDGSAIGVAYIQGMNVNLRSGPSTSSSVIRKLNNPESYLVYMNQNGW--LNLGGNQ-WVY 322
>gi|317495493|ref|ZP_07953861.1| hypothetical protein HMPREF0432_00463 [Gemella moribillum M424]
gi|316914307|gb|EFV35785.1| hypothetical protein HMPREF0432_00463 [Gemella moribillum M424]
Length = 482
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ R GP Y V+ +T G VE + + + W +++ D +GWI
Sbjct: 49 SKEIELRTGPDSSYPVL-KKITAGENVEQLSKTDTWYEVKTKDSYVGWIPGW 99
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIK 180
I L PD ++ K+ G + + W D GWI
Sbjct: 52 IELRTGPDSSYPVLKKITAGENVEQLSKTDTWYEVKTKDSYVGWIP 97
>gi|332519329|ref|ZP_08395796.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045177|gb|EGI81370.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 252
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
A A + P + L +G V+V+ NW++I+ DG GWI
Sbjct: 193 AQEAQVKSEPNLRSDEAFV-LHEGTKVQVLDTVNNWKKIKLSDGKTGWI 240
>gi|330944673|gb|EGH46615.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 123
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + + A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFAVSRRLLGAGLVGAALT-VVMPGSAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 51 DSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|302385733|ref|YP_003821555.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302196361|gb|ADL03932.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 780
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIR--DFDGTI- 107
+ T+ A+ N R GPG Y+VV T LT G V V+ E W QIR G
Sbjct: 39 KAATVNATSLNVRSGPGTTYSVV-TKLTNGASVTVIDEKNASDGALWYQIRVSGSGGQKV 97
Query: 108 -GWINKSLL 115
G+++KS L
Sbjct: 98 TGYVSKSFL 106
>gi|163937908|ref|YP_001642794.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|163865763|gb|ABY46819.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 332
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 13/126 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLL 115
+TI + N R G G + V + V W + G W+ S
Sbjct: 204 ITIAGTGVNIRTGAGTNFPVKRQIVPNTY--IVWAMQNGWACV----GGDEWVYADPSYT 257
Query: 116 SGKRSAIVSPWNRKTNN--PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ K ++ P +NL K P + K+ + G+W
Sbjct: 258 TLKLNSQPKPTVTGVAYILGTNVNLRKSPSKNGEFIRKLNKPEEYKVWAREGDW--LNLG 315
Query: 174 DTEGWI 179
+ W+
Sbjct: 316 GNQ-WV 320
>gi|82545309|ref|YP_409256.1| signal transduction protein [Shigella boydii Sb227]
gi|81246720|gb|ABB67428.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320187120|gb|EFW61823.1| Arylsulfatase [Shigella flexneri CDC 796-83]
gi|332092138|gb|EGI97216.1| hypothetical protein SB359474_3374 [Shigella boydii 3594-74]
Length = 206
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|325104449|ref|YP_004274103.1| NLP/P60 protein [Pedobacter saltans DSM 12145]
gi|324973297|gb|ADY52281.1| NLP/P60 protein [Pedobacter saltans DSM 12145]
Length = 259
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKIWGIYPGE 191
I + + +S I+++V G L + + +GEW D EGW+ +++I +Y GE
Sbjct: 13 IPVRAEASHRSEIISQVLFGEYLDVLDKNGEWIRIKTLYDDYEGWVDEKQI--VYVGE 68
>gi|295706714|ref|YP_003599789.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
gi|294804373|gb|ADF41439.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
Length = 300
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V +++ P I K+ L++ + G+W + + D +GW+ K+
Sbjct: 25 VPVHQPIIVTADSLHVRSGPGRSFSITNKLTKNTRLSVSDRQGDWYYVKSSDIQGWVFKK 84
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
P+ + + + A + R GPG +++ LTK + V +W ++ D GW+
Sbjct: 24 NVPVHQPIIVTADSLHVRSGPGRSFSIT-NKLTKNTRLSVSDRQGDWYYVKSSD-IQGWV 81
Query: 111 NKSLL 115
K
Sbjct: 82 FKKFT 86
>gi|228991244|ref|ZP_04151202.1| Cell wall hydrolase/autolysin [Bacillus pseudomycoides DSM 12442]
gi|228997342|ref|ZP_04156964.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock3-17]
gi|228762434|gb|EEM11359.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock3-17]
gi|228768468|gb|EEM17073.1| Cell wall hydrolase/autolysin [Bacillus pseudomycoides DSM 12442]
Length = 331
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 9/136 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L + +A+ L + + I+ N R GP +V+
Sbjct: 166 LCQAYARGIAVILGLTANPNPPNPEPPSPAPQTKGVAYIRGKNVNLRSGPSTSSSVI-RQ 224
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIV--SPWNRKTNNPIYIN 137
L V +E W + G WI S + + SP +N
Sbjct: 225 LNSPESYVVYQESNGWLDL----GAGQWIYNDPSYIDYVKYGNSDGSPIGVANIRGTNVN 280
Query: 138 LYKKPDIQSIIVAKVE 153
L P S ++ ++
Sbjct: 281 LRSGPSTSSSVIRQLN 296
>gi|229004967|ref|ZP_04162694.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock1-4]
gi|228756315|gb|EEM05633.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock1-4]
Length = 331
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 9/136 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L + +A+ L + + I+ N R GP +V+
Sbjct: 166 LCQAYARGIAVILGLTANPNPPNPEPPSPAPQTKGVAYIRGKNVNLRSGPSTSSSVI-RQ 224
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIV--SPWNRKTNNPIYIN 137
L V +E W + G WI S + + SP +N
Sbjct: 225 LNSPESYVVYQESNGWLDL----GAGQWIYNDPSYIDYVKYGNSDGSPIGVANIRGTNVN 280
Query: 138 LYKKPDIQSIIVAKVE 153
L P S ++ ++
Sbjct: 281 LRSGPSTSSSVIRQLN 296
>gi|229060754|ref|ZP_04198109.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH603]
gi|228718401|gb|EEL70033.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH603]
Length = 602
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 11/106 (10%)
Query: 82 LTKGLP--VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+ K LP V VV+E W +IR DG W+N T P Y
Sbjct: 305 VGKYLPQTVTVVEENSIWLKIRTSDGLQ-WMN-------PYLEEGEGRELTYIPKEFFAY 356
Query: 140 KKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ S + K P G + + + W W+ +
Sbjct: 357 DSPNFSSKVSGKYAPQGGVEELAKGDDGWVQIRTDKGPKWVNMSYL 402
>gi|164686138|ref|ZP_02210168.1| hypothetical protein CLOBAR_02576 [Clostridium bartlettii DSM
16795]
gi|164601740|gb|EDQ95205.1| hypothetical protein CLOBAR_02576 [Clostridium bartlettii DSM
16795]
Length = 195
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 11/92 (11%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K ++ AI L + + K + N R G Y
Sbjct: 1 MFKKFTKTVAILGAIMITLG-VTTPAQAASCGTGK--------TTATVNVRTGASTKYRK 51
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ L+KG V + W +I+ F+G GW
Sbjct: 52 IGK-LSKGKKVNLYTTKNGWYKIK-FNGKYGW 81
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 17/63 (26%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + + +N+ + + K+ G + + W
Sbjct: 20 GVTTPAQAASCGTGKTTATVNVRTGASTKYRKIGKLSKGKKVNLYTTKNGWYKIKFNGKY 79
Query: 177 GWI 179
GW+
Sbjct: 80 GWV 82
>gi|90022607|ref|YP_528434.1| hypothetical protein Sde_2965 [Saccharophagus degradans 2-40]
gi|89952207|gb|ABD82222.1| hypothetical protein Sde_2965 [Saccharophagus degradans 2-40]
Length = 262
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L KY+ L ++ LAI P LA + + E+ + + GP
Sbjct: 4 IGLYKYLVSKLAPFIVIALAI-----PQLAAAKDFELSGVL-----LEVIDPYLELHTGP 53
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
G Y + + +G V V+ W ++ +GW+++S ++
Sbjct: 54 GRGYPIFYV-IEEGEGVVVLTRQPGWYEVLSQSNQVGWVSESQIART 99
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
Y+ L+ P I +E G + + W + GW+ + +I
Sbjct: 46 YLELHTGPGRGYPIFYVIEEGEGVVVLTRQPGWYEVLSQSNQVGWVSESQI 96
>gi|46143377|ref|ZP_00135364.2| COG3103: SH3 domain protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208200|ref|YP_001053425.1| hypothetical protein APL_0720 [Actinobacillus pleuropneumoniae L20]
gi|165976136|ref|YP_001651729.1| SH3 domain-containing protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150031|ref|YP_001968556.1| hypothetical protein APP7_0762 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251487|ref|ZP_07337663.1| SH3 domain-containing protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252360|ref|ZP_07338526.1| SH3 domain-containing protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307245579|ref|ZP_07527665.1| hypothetical protein appser1_7820 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247698|ref|ZP_07529737.1| hypothetical protein appser2_6900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307249932|ref|ZP_07531904.1| hypothetical protein appser4_7280 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252275|ref|ZP_07534172.1| hypothetical protein appser6_7930 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254534|ref|ZP_07536369.1| hypothetical protein appser9_7810 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256742|ref|ZP_07538521.1| hypothetical protein appser10_7450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258989|ref|ZP_07540720.1| hypothetical protein appser11_7880 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307261185|ref|ZP_07542860.1| hypothetical protein appser12_7490 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263364|ref|ZP_07544980.1| hypothetical protein appser13_7810 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|126096992|gb|ABN73820.1| hypothetical protein APL_0720 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165876237|gb|ABY69285.1| SH3 domain protein [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|189915162|gb|ACE61414.1| hypothetical protein APP7_0762 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648819|gb|EFL79009.1| SH3 domain-containing protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649719|gb|EFL79899.1| SH3 domain-containing protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853281|gb|EFM85500.1| hypothetical protein appser1_7820 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306855801|gb|EFM87965.1| hypothetical protein appser2_6900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857992|gb|EFM90076.1| hypothetical protein appser4_7280 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860197|gb|EFM92213.1| hypothetical protein appser6_7930 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862517|gb|EFM94476.1| hypothetical protein appser9_7810 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306864790|gb|EFM96694.1| hypothetical protein appser10_7450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867013|gb|EFM98870.1| hypothetical protein appser11_7880 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868916|gb|EFN00718.1| hypothetical protein appser12_7490 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871242|gb|EFN02970.1| hypothetical protein appser13_7810 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R G G Y + + G V V+ + + IRD GW+ S +S S
Sbjct: 34 MRKGAGDQYKISGA-VQAGEKVTVLDRKDRFVLIRDSRNREGWVLASEISQTAS 86
>gi|153813745|ref|ZP_01966413.1| hypothetical protein RUMOBE_04179 [Ruminococcus obeum ATCC 29174]
gi|149830165|gb|EDM85258.1| hypothetical protein RUMOBE_04179 [Ruminococcus obeum ATCC 29174]
Length = 169
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 22/69 (31%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ S+ S N+ + + S I+ ++ G + G+W
Sbjct: 100 ADTSSSETSADGTMLTVTEGCNVRAEANSDSEIIGGLDEGDQVQKMGQEGDWIQIEYDGQ 159
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 160 TGYVYSGLL 168
>gi|126463785|ref|YP_001044898.1| hypothetical protein Rsph17029_3026 [Rhodobacter sphaeroides ATCC
17029]
gi|332561040|ref|ZP_08415358.1| hypothetical protein RSWS8N_18379 [Rhodobacter sphaeroides WS8N]
gi|126105596|gb|ABN78126.1| protein of unknown function DUF1236 [Rhodobacter sphaeroides ATCC
17029]
gi|332274838|gb|EGJ20154.1| hypothetical protein RSWS8N_18379 [Rhodobacter sphaeroides WS8N]
Length = 221
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C + +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
N R GPG YT+V + V V + W ++ + +GT GW L+
Sbjct: 35 NLRSGPGSNYTIVGV-IPSDALVMVEGCVDAAKWCRV-NHEGTSGWAAGDYLA 85
>gi|320179302|gb|EFW54260.1| Arylsulfatase [Shigella boydii ATCC 9905]
Length = 206
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|315104760|gb|EFT76736.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA2]
Length = 232
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ + + +N+ P + + + G E G W GW +
Sbjct: 33 AKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQIRTNGYTGWAYRT 92
Query: 183 KIWG 186
+ G
Sbjct: 93 HLTG 96
>gi|228908016|ref|ZP_04071865.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 200]
gi|228851613|gb|EEM96418.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 200]
Length = 328
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ LT V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLTSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
SP + +NL P S ++ ++ P
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSTVIRQLNP 294
>gi|74316999|ref|YP_314739.1| hypothetical protein Tbd_0981 [Thiobacillus denitrificans ATCC
25259]
gi|74056494|gb|AAZ96934.1| hypothetical protein Tbd_0981 [Thiobacillus denitrificans ATCC
25259]
Length = 177
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
LY +P S + A G +TI G W + + GWI+
Sbjct: 34 LYSQPSATSKVTATAAKGASVTILAKRGGWLQVKSGSSSGWIR 76
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 20/132 (15%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + LI LA+ + + AL+ + + + L P V T
Sbjct: 1 MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLY-------------SQPSATSKVTAT 47
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
KG V ++ + W Q++ + GWI LLS + A +
Sbjct: 48 -AAKGASVTILAKRGGWLQVK-SGSSSGWI--RLLSVRAGAGGLGGAGLGDVVGAATTRS 103
Query: 141 KPDIQSIIVAKV 152
P S +VA
Sbjct: 104 DP---SRVVAVA 112
>gi|298292120|ref|YP_003694059.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928631|gb|ADH89440.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 233
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R GPG Y V+ + L G V V NW ++ GW++ S ++G ++
Sbjct: 29 TNTVNVRSGPGTNYRVIGS-LPAGARVSVGGCTRNWCRV-----GGGWVSASFIAGGGTS 82
Query: 122 IVSPWNRKTNN 132
+V + ++
Sbjct: 83 VVVSPDYYADD 93
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V +N+ P ++ + G +++ C+ WC GW+
Sbjct: 19 VVNAASAAVITNTVNVRSGPGTNYRVIGSLPAGARVSVGGCTRNWCRVGG----GWVSAS 74
Query: 183 KIWG 186
I G
Sbjct: 75 FIAG 78
>gi|218778677|ref|YP_002429995.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760061|gb|ACL02527.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 655
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI--RDFDGT--IGWINKSLL 115
+ S N R P + KG V ++++ + W ++ RD G GW++ +
Sbjct: 110 VTTSGLNIRTEP--NGAKISLLPQKGQ-VSILEDKDGWLRVRGRDISGKNVEGWVSAKYV 166
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
SA +R P+ +NL KP ++ +E GV L++ + C +
Sbjct: 167 KESTSANPGAGSRDNAMPV-VNLDSKP---LKVLHNMELGV-LSLETGDADACRNHIQ 219
>gi|116622523|ref|YP_824679.1| NLP/P60 protein [Candidatus Solibacter usitatus Ellin6076]
gi|116225685|gb|ABJ84394.1| NLP/P60 protein [Candidatus Solibacter usitatus Ellin6076]
Length = 277
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 10/136 (7%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-NKS 113
P V ++ AN P VV + G V +++E + W IR D GW +
Sbjct: 15 PNAVVLQ-PVANMYSRPSADADVVSQAI-YGANVNLIEEKDGWAHIRTADDYTGWTPLSA 72
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIR---ECSGEWCF 169
LL GK A + ++ ++Y++ + + V V L + + W
Sbjct: 73 LLPGKAYA--TSGRVGEVQSLFAHIYREASVTRHAPLVTVPFEVKLEVLTEPKEDTRWFQ 130
Query: 170 GYN-LDTEGWIKKQKI 184
D GWI+ I
Sbjct: 131 VRLPDDRAGWIQAGDI 146
>gi|159185099|ref|NP_355162.2| hypothetical protein Atu2203 [Agrobacterium tumefaciens str. C58]
gi|159140370|gb|AAK87947.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 199
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 13/57 (22%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
I++ P + G + C WC GW +
Sbjct: 27 ATTASDISVRSGPGEDYPELGLATRGSNAVLDGCMEGSSWCRIEVNGLRGWAHADYL 83
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V AS + R GPG Y + ++ E +W +I +G GW + L
Sbjct: 25 MVATTASDISVRSGPGEDYPELGLATRGSNAVLDGCMEGSSWCRIE-VNGLRGWAHADYL 83
Query: 116 S 116
+
Sbjct: 84 N 84
>gi|325918968|ref|ZP_08181035.1| SH3 type 3 domain protein [Xanthomonas vesicatoria ATCC 35937]
gi|325534813|gb|EGD06742.1| SH3 type 3 domain protein [Xanthomonas vesicatoria ATCC 35937]
Length = 266
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGE 166
W L++ A+ + + L P + V +V+PG L + C SG
Sbjct: 17 WSALWLMAA---AMPVWAQHAGHANGLVGLRAGPAEEYRRVGEVQPGNALQVYGCLDSGT 73
Query: 167 WCFGYNLDTEGWIKKQKI 184
WC + + GW+ I
Sbjct: 74 WCDVRSPEARGWLPATSI 91
>gi|261839969|gb|ACX99734.1| putative cell wall peptidase, NlpC/P60 family [Helicobacter pylori
52]
Length = 196
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL V + + N R P ++ + L K V+V++ +W +I +
Sbjct: 125 STPTMGKKPLEYKVAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 181
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 182 ETKGYVFLKLLKK 194
>gi|332703249|ref|ZP_08423337.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553398|gb|EGJ50442.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 223
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R GP + ++ L G +E++++ + W ++R G GW+ K +
Sbjct: 37 LRTGPNTTHKII-QMLPTGSSLELLEDGDEWARVRTEKGREGWVAKRFI 84
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L P+ I+ + G L + E EW EGW+ K+ I
Sbjct: 29 VTDEHEFTLRTGPNTTHKIIQMLPTGSSLELLEDGDEWARVRTEKGREGWVAKRFI 84
>gi|281180109|dbj|BAI56439.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 206
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|163940046|ref|YP_001644930.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|163862243|gb|ABY43302.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 333
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINK--SLLS--GK 118
N R GP +V+ P V +E W + G W+ S ++
Sbjct: 211 VNLRSGPSTSSSVI---RQLNAPESYVVYQESNGWLDL----GNGQWVYNDPSYINFLKT 263
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ SP +NL P S ++ K+
Sbjct: 264 SNSDGSPIGVAYIKGTNVNLRSGPSTSSSVIRKLN 298
>gi|169829201|ref|YP_001699359.1| hypothetical protein Bsph_3745 [Lysinibacillus sphaericus C3-41]
gi|168993689|gb|ACA41229.1| hypothetical protein Bsph_3745 [Lysinibacillus sphaericus C3-41]
Length = 180
Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+TI N R GPG Y ++ +K + V ++ +W
Sbjct: 120 ITITVQSVNIRNGPGTSYKILGI-ASKNNTLTVYEKKGDWYH 160
>gi|77465382|ref|YP_354885.1| hypothetical protein RSP_3380 [Rhodobacter sphaeroides 2.4.1]
gi|77389800|gb|ABA80984.1| hypothetical protein RSP_3380 [Rhodobacter sphaeroides 2.4.1]
Length = 221
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C + +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
N R GPG YT+V + V V + W ++ + +GT GW L+
Sbjct: 35 NLRSGPGSNYTIVGV-IPSDALVMVEGCVDAAKWCRV-NHEGTSGWAAGDYLA 85
>gi|260588914|ref|ZP_05854827.1| putative spore cortex-lytic enzyme [Blautia hansenii DSM 20583]
gi|331083396|ref|ZP_08332508.1| hypothetical protein HMPREF0992_01432 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540693|gb|EEX21262.1| putative spore cortex-lytic enzyme [Blautia hansenii DSM 20583]
gi|330404089|gb|EGG83637.1| hypothetical protein HMPREF0992_01432 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 249
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPI--YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ L+ W+ K + Y N+ K DI + V K+ G ++T+ W
Sbjct: 22 MAVPALADTTDKATFDWSDKAAANVTTYANIRKGSDISTERVGKLPAGAVVTVVGEENGW 81
Query: 168 CFGYNLDTEGWIKKQKI 184
+ + EG+I++ +
Sbjct: 82 VQVSSGEIEGYIREDLL 98
Score = 34.6 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R+ K+L P LA + +K F+ + + AN R G
Sbjct: 1 MRRKFMKLLTCVGTVGAMTVAMAVPALADTTDKATFDWSD--KAAANVTTYANIRKG--- 55
Query: 74 MYTVVCTYLTK---GLPVEVVKEYENWRQIRDFDGTIGWINKSLL-SGKRS-----AIVS 124
+ + K G V VV E W Q+ + G+I + LL SG+ + ++
Sbjct: 56 -SDISTERVGKLPAGAVVTVVGEENGWVQVSSGE-IEGYIREDLLVSGEEAQQLFESVHG 113
Query: 125 PWNRKTNNPIYINLYKKP-DIQSIIVAKVEPGVLLTIRECSGE 166
P+ + Q+ V++ + ++ I EC
Sbjct: 114 DGEITGAQPLDAVVETAAVSNQTTSVSQADLDLMAAIIECEAG 156
>gi|218555625|ref|YP_002388538.1| putative signal transduction protein [Escherichia coli IAI1]
gi|218362393|emb|CAR00017.1| putative signal transduction protein (SH3 domain) [Escherichia coli
IAI1]
Length = 206
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|154248641|ref|YP_001419599.1| SH3 type 3 domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154162726|gb|ABS69942.1| SH3 type 3 domain protein [Xanthobacter autotrophicus Py2]
Length = 589
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SG 165
GW+ ++G IVS + +N+ PD + + + G L + C
Sbjct: 8 GWVAGLAMAG----IVSAQAAPAFSTANVNIRTGPDTEFPSLGVIPEGSPLEVEGCLQDE 63
Query: 166 EWCFGYNLDTEGWIKKQKI 184
WC D GW+ + +
Sbjct: 64 SWCDVIWQDYRGWVYSEYL 82
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 10/106 (9%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--E 93
LA +A I + P F T + N R GP + + + +G P+EV +
Sbjct: 6 LAGWVAGLAMAGIVSAQAAPAFST---ANVNIRTGPDTEFPSLGV-IPEGSPLEVEGCLQ 61
Query: 94 YENWRQIRDFDGTIGWINKSLLS---GKRSAIVSPWNRKTNNPIYI 136
E+W + + GW+ L R+A++ W +
Sbjct: 62 DESWCDVI-WQDYRGWVYSEYLGYEQQGRTAVLPDWGVAAIGVPVV 106
>gi|311067336|ref|YP_003972259.1| hypothetical protein BATR1942_01850 [Bacillus atrophaeus 1942]
gi|310867853|gb|ADP31328.1| hypothetical protein BATR1942_01850 [Bacillus atrophaeus 1942]
Length = 178
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 14/180 (7%)
Query: 12 LDLRKYMPKILQNS---LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ ++K + + + F P + + P ++ IKA N R
Sbjct: 1 MKMKKALIAFTVAAGLGFTAAGNVPFDAVPTAQAASSHQTNVTMPTDSYM-IKAGELNVR 59
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
P ++ T ++ V V +W +I+ F G +I+ L + S +
Sbjct: 60 TQPNHKGKILGTLKSED-KVNVKGFAGADWAEIQ-FKGQKAYISTHFLMKQTSLAKTANK 117
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EWCFGYNLDTEGWIKKQKI 184
+P K+ V+ + G E G W + G+I +
Sbjct: 118 TIFYSPTPEVGKKQSISSGTQVSFLGWG----FSENGGFDFNWAYVDYDGVRGYIHTDDL 173
>gi|299538047|ref|ZP_07051333.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus fusiformis ZC1]
gi|298726629|gb|EFI67218.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus fusiformis ZC1]
Length = 644
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + S ++ K+ G + + +G W G++ K +
Sbjct: 396 GRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNNINGYWAEITYNGQTGYVHKSYL 451
>gi|326335004|ref|ZP_08201204.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692809|gb|EGD34748.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 250
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K+L + FTL + F + + + + + P Y+
Sbjct: 150 FSQKVLLKRIFFTLMLGFLFLSVGSYFLGNTVNRYVHRNLYGVLFDKEVRFFEEPNT-YS 208
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
L +G VE++ E +W +++ DG GW+ K L
Sbjct: 209 KEAFLLHEGAKVEILDEVGDWYKLKIADGRTGWVKKHTL 247
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ +++P+ S + G + I + G+W GW+KK +
Sbjct: 198 VRFFEEPNTYSKEAFLLHEGAKVEILDEVGDWYKLKIADGRTGWVKKHTL 247
>gi|299144009|ref|ZP_07037089.1| putative chitinase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518494|gb|EFI42233.1| putative chitinase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 551
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R I +V L + V V E ++ ++R+ DG G+I KSLL
Sbjct: 160 TGDGLNMREEDSIKSPIVSI-LKRDNKVYVYGEKGDFYKVREIDGYSGYIKKSLLD 214
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 13/76 (17%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIW----- 185
+N+ ++ I+S IV+ ++ + + G++ G+IKK +
Sbjct: 160 TGDGLNMREEDSIKSPIVSILKRDNKVYVYGEKGDFYKVREIDGYSGYIKKSLLDVEFPK 219
Query: 186 -------GIYPGEVFK 194
GI GE K
Sbjct: 220 NKFKLEIGIDNGEAVK 235
>gi|241207100|ref|YP_002978196.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860990|gb|ACS58657.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 224
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 18/106 (16%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
LI +A L A++ E + + N R GP Y V + G
Sbjct: 4 LIVKIAAAGMLMLAPAIAQAAEGYS-----------TANVNMRAGPSTRYPAVTV-IPAG 51
Query: 86 LPVEVVKEYE--NWRQIRDFDGTIGWI---NKSLLSGKRSAIVSPW 126
VE+ NW + + G GW+ L +R V P
Sbjct: 52 SSVEIRGCLSDVNWCDVEFYGG-RGWVSGQYVQALYQQRRVYVGPQ 96
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + V + G + IR C + WC GW+ Q +
Sbjct: 32 VNMRAGPSTRYPAVTVIPAGSSVEIRGCLSDVNWCDVEFYGGRGWVSGQYV 82
>gi|156932581|ref|YP_001436497.1| putative signal transduction protein [Cronobacter sakazakii ATCC
BAA-894]
gi|156530835|gb|ABU75661.1| hypothetical protein ESA_00363 [Cronobacter sakazakii ATCC BAA-894]
Length = 204
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
+ + ++ A++ EK R+V+ N R GPG Y +V
Sbjct: 1 MHKLRLICFSLLALSVTFQAVAEEK---------RYVS---DELNTWVRSGPGDNYRLVG 48
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T + G V +++ + QIRD G WI L + S + +
Sbjct: 49 T-VNAGEEVALLESNGKYGQIRDASGRTSWIPLEQLKSEPSLRTRVPELENQVKTLTD 105
>gi|86131260|ref|ZP_01049859.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
MED134]
gi|85818671|gb|EAQ39831.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
MED134]
Length = 254
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ L F ++ L IL+L F K + A+ + + P + T+ L
Sbjct: 160 KKRLFFVSSVTSLLLAILSLVFAYNAFAKISKDNPAIVFAATSEVKSEPNLKSTLAFI-L 218
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+G V +++ +NW +I+ DG GWI
Sbjct: 219 HEGTKVMILETVDNWNKIKLADGKTGWI 246
>gi|157963303|ref|YP_001503337.1| SH3 type 3 domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848303|gb|ABV88802.1| SH3 type 3 domain protein [Shewanella pealeana ATCC 700345]
Length = 181
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSL 114
R+++ GPG + ++ + + G V +KE ++ +I D G GW+ +
Sbjct: 14 RYISDDV-YIYLHGGPGTQFRILGS-IEAGQEVTSLKETQGDYSKIVDHKGREGWVQSKM 71
Query: 115 LSGKRSAIV 123
LS K S V
Sbjct: 72 LSAKMSLRV 80
>gi|325845767|ref|ZP_08169031.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481905|gb|EGC84936.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 164
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V N+ ++ + +S IVA ++PGV + E G+W +G+I +
Sbjct: 99 VKEAVGTFTVKDISNIRRETNEESEIVATIQPGVEVERSEIDGKWSKVSYDQYQGYILTE 158
Query: 183 KI 184
+
Sbjct: 159 LL 160
>gi|212695928|ref|ZP_03304056.1| hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM
7454]
gi|212677051|gb|EEB36658.1| hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM
7454]
Length = 164
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
V N+ ++ + +S IVA ++PGV + E G+W +G+I +
Sbjct: 99 VKEAVGTFTVKDISNIRRETNEESEIVATIQPGVEVERSEIDGKWSKVSYDQYQGYILTE 158
Query: 183 KI 184
+
Sbjct: 159 LL 160
>gi|262195624|ref|YP_003266833.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
gi|262078971|gb|ACY14940.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
Length = 298
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKG--LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
A A GPG Y V Y +G PV W ++ DGT GWI + ++
Sbjct: 73 AQEAAVHTGPGASYREVY-YAKRGQRFPVLERATVGYWFRVELDDGTTGWIYGAFVA 128
>gi|261868440|ref|YP_003256362.1| SH3 domain-containing protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413772|gb|ACX83143.1| SH3 domain protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 203
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y + + G PV V+ + + + IRD WI S LS + S+
Sbjct: 36 LRKGAGDQYKIAGA-IKSGEPVTVLDQKDRYTLIRDGKDREAWILSSELSNEASS 89
>gi|332560121|ref|ZP_08414443.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332277833|gb|EGJ23148.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYE 95
AP L+ ++P + A N R GP Y VV L G V V +
Sbjct: 101 APQPVLAAATVAETRQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLR-GDAVLVDGPQEG 159
Query: 96 NWRQIR-DFDGTIGWINKSLLS 116
+W IR + DG G++ L+
Sbjct: 160 SWAPIRIEGDGVAGYMAARFLA 181
>gi|169342176|ref|ZP_02863264.1| bacteriocin [Clostridium perfringens C str. JGS1495]
gi|169299729|gb|EDS81784.1| bacteriocin [Clostridium perfringens C str. JGS1495]
Length = 939
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y + L +G V +V + W +I G++++ + K ++ S
Sbjct: 590 NVRKGPGTNYESIGQ-LHQGDKVSIVAKNREWYKISSP--IAGYVHEDFIKIKEASNSSE 646
Query: 126 WNRKTNNPIYINLYKK 141
+ + ++ + K
Sbjct: 647 DKKSPSMQGFVEVLTK 662
>gi|218234992|ref|YP_002367346.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus B4264]
gi|218162949|gb|ACK62941.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus B4264]
Length = 311
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I+ + N R GPG Y V+ L KG +V E W + G W+ +
Sbjct: 182 IEGNNVNLRKGPGTGYGVI-RQLGKGECYQVWGELSGWLNL----GGDQWVYNDSSYIRY 236
Query: 120 SAIVSPWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P K T + + P +V V W
Sbjct: 237 TGENAPAPSKPSIDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYREGWYNV 296
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 297 ---GGDQWVSGEYV 307
>gi|160881588|ref|YP_001560556.1| SH3 type 3 domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160430254|gb|ABX43817.1| SH3 type 3 domain protein [Clostridium phytofermentans ISDg]
Length = 1281
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 61/200 (30%), Gaps = 45/200 (22%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ ++ + IL S++ ++ P A + K I AS R GP
Sbjct: 19 MKHKRLIIWILCISMLIPNILWQT--PNAAYAATKGICT-----------ASTLYVRKGP 65
Query: 72 GIMYTVVC-----TYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLL-------- 115
Y V YL K V ++ E + W +I G G+ + +
Sbjct: 66 QTSYDKVTSGGADVYLVKDQEVTILSEKDGWYEIEATFGGKKIKGYSLGTYIKKVDGTAS 125
Query: 116 --------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--- 164
S SA T N +N+ K + S ++ + G +T+
Sbjct: 126 KPTPTPTPSSGSSATYKLSQPATVNASQLNIRKDNNTTSTVLGTLVSGDSVTVIGTKWNG 185
Query: 165 -GEWCFGY----NLDTEGWI 179
W G++
Sbjct: 186 VDCWYQIQTKVGGKTVTGYV 205
>gi|257866361|ref|ZP_05646014.1| predicted protein [Enterococcus casseliflavus EC30]
gi|257873123|ref|ZP_05652776.1| predicted protein [Enterococcus casseliflavus EC10]
gi|257800319|gb|EEV29347.1| predicted protein [Enterococcus casseliflavus EC30]
gi|257807287|gb|EEV36109.1| predicted protein [Enterococcus casseliflavus EC10]
Length = 700
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 34/151 (22%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEY--------ENWRQIRDFDGTIGWI 110
+K + A N R +VV + L+KG +NW + GW+
Sbjct: 416 MKTTEAMNIRSSASTSGSVVGS-LSKGTTFTATSMKTGTSVNGNKNWYYVS----GKGWV 470
Query: 111 NKSLLSGKRSAIVSPWNRKTN---------NPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ + L+ + S ++ N +N+ S +V + GV +T+
Sbjct: 471 SGAYLTEVTNNNASEAEKEDNSSSINQKMKTTAALNVRSDASTSSRVVTTLGQGVTVTVT 530
Query: 162 ECSGE--------WCFGYNLDTEGWIKKQKI 184
W + +GW+ +
Sbjct: 531 AKKNGTSVEGNKTWYYVSG---KGWVSGAYL 558
>gi|326675577|ref|XP_003200390.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Danio
rerio]
Length = 873
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G VEV+++ E W +R + GW+ + L +G+R + +R N
Sbjct: 58 LKAGERVEVIEKSESGWWFVRTAE-EQGWVPATYLVSLTGRRDS-----HRAPNGETEWY 111
Query: 138 LYKKP-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +P S E GV++ + + + W F EGW +
Sbjct: 112 ITVQPFSSSSQDELGFESGVIVEVIQRNLEGWWFIRYGGKEGWAPAAYL 160
>gi|226949118|ref|YP_002804209.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226843519|gb|ACO86185.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 252
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GW+N L GK I +P +N+ +K S I+ + G + + G+W
Sbjct: 185 GWVN---LDGKTGTICTPSG--------VNVREKKSTSSRILGTLPNGAKVRLYRKEGDW 233
Query: 168 CFGYNLDTEGWIKKQKI 184
Y G+I + +
Sbjct: 234 IHIYYPSHGGYIYGKYV 250
>gi|153940860|ref|YP_001391135.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|152936756|gb|ABS42254.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|295319176|gb|ADF99553.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
230613]
Length = 252
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GW+N L GK I +P +N+ +K S I+ + G + + G+W
Sbjct: 185 GWVN---LDGKTGTICTPSG--------VNVREKKSTSSRILGTLPNGAKVRLYRKEGDW 233
Query: 168 CFGYNLDTEGWIKKQKI 184
Y G+I + +
Sbjct: 234 IHIYYPSHGGYIYGKYV 250
>gi|60677326|ref|YP_209684.1| bacteriocin BCN5 [Clostridium perfringens]
gi|60417961|dbj|BAD90628.1| bacteriocin BCN5 [Clostridium perfringens]
Length = 950
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GPG Y + L +G V +V + +W +I+ +D G++NK ++ S+ +
Sbjct: 800 NVRKGPGTEYDSIGQ-LYQGNKVSIVAKDRDWYKIK-YDSDYGFVNKKFINILVSSEENI 857
Query: 126 WNRKTNNPIYINL 138
+ +N+
Sbjct: 858 KDNDVEEKKNLNV 870
>gi|229495706|ref|ZP_04389434.1| hypothetical protein POREN0001_0979 [Porphyromonas endodontalis
ATCC 35406]
gi|229317280|gb|EEN83185.1| hypothetical protein POREN0001_0979 [Porphyromonas endodontalis
ATCC 35406]
Length = 271
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
WI+ S V + + L ++P Q+ V + L + GE
Sbjct: 192 ESWIHYS---------VVAVGTRNYGEQTLKLREQPSGQARAVYTFSKEITLRPLDKRGE 242
Query: 167 WCFGYN--LDTEGWIKKQKIWG 186
W +GWI+++ + G
Sbjct: 243 WVKVQTLDKKHQGWIEEEWLCG 264
>gi|15803597|ref|NP_289630.1| putative signal transduction protein [Escherichia coli O157:H7
EDL933]
gi|25322895|pir||A85966 hypothetical protein ygiM [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12517634|gb|AAG58189.1|AE005535_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 206
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRXVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|260642078|ref|ZP_05414496.2| N-acetylmuramoyl-L-alanine amidase [Bacteroides finegoldii DSM
17565]
gi|260623625|gb|EEX46496.1| N-acetylmuramoyl-L-alanine amidase [Bacteroides finegoldii DSM
17565]
Length = 281
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 6/56 (10%), Positives = 21/56 (37%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P +N+ + S ++ ++ G ++ + W +G++ +
Sbjct: 47 RVTAPNGLNVRASANKNSEVLGQLSQGNVVDVISIENGWANINYNGWQGYVSTSYL 102
>gi|146279864|ref|YP_001170022.1| hypothetical protein Rsph17025_3862 [Rhodobacter sphaeroides ATCC
17025]
gi|145558105|gb|ABP72717.1| hypothetical protein Rsph17025_3862 [Rhodobacter sphaeroides ATCC
17025]
Length = 220
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P IV L+ + C WC T GW +
Sbjct: 31 TDLNLRSGPGSNYTIVGVAPLDALVMVEGCVEGANWCRVNYEGTSGWAAGNYL 83
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
N R GPG YT+V V V E NW ++ +++GT GW + L+
Sbjct: 34 NLRSGPGSNYTIVGV-APLDALVMVEGCVEGANWCRV-NYEGTSGWAAGNYLA 84
>gi|319403995|emb|CBI77583.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 218
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEG 177
++ V+ L P + A V G + I C + WC + +T G
Sbjct: 25 TSDVAAGTVAKIEKGKAILRAGPATTYKVTAVVPTGAKVQINGCLADKVWCLLQHNETVG 84
Query: 178 WIKKQ 182
W
Sbjct: 85 WASAN 89
>gi|260588017|ref|ZP_05853930.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
gi|260541544|gb|EEX22113.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
Length = 756
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN 172
L + V +N+ + + +S I+ +E L + E +W + +
Sbjct: 402 YLRATVNQTVVDKEYALTTASLLNIREDKNTESRIIGTLEENSLCYVLEDAEEDWVYIES 461
Query: 173 LDTEGWIKKQKI 184
D G++ K+ +
Sbjct: 462 GDVRGFVAKEYL 473
>gi|222149916|ref|YP_002550873.1| hypothetical protein Avi_3964 [Agrobacterium vitis S4]
gi|221736898|gb|ACM37861.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 287
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P Q V V G + I C S WC GWI +
Sbjct: 32 VNLRAGPSTQYPPVLVVPAGNSVRIFGCLSSANWCDVGYAGYRGWISGSYL 82
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
N R GP Y V + G V + NW + + G GWI+ S L
Sbjct: 32 VNLRAGPSTQYPPVLV-VPAGNSVRIFGCLSSANWCDV-GYAGYRGWISGSYL 82
>gi|326791034|ref|YP_004308855.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541798|gb|ADZ83657.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 234
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M KI++ + + ++ L P+ A + K + + N R P V
Sbjct: 1 MKKIIKAVCLIGI-LWGTLIPVYATTTAKNNIFPSYTGVTAQLVGNEINVRNYPSKYGKV 59
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ L + ++ + + W ++ G GW++K +
Sbjct: 60 LM--LANEQELHILGQNDKWYRVS-VKGEEGWVSKDFV 94
>gi|289207932|ref|YP_003459998.1| SH3 type 3 domain protein [Thioalkalivibrio sp. K90mix]
gi|288943563|gb|ADC71262.1| SH3 type 3 domain protein [Thioalkalivibrio sp. K90mix]
Length = 223
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-QIRDFDGTIGWINKSL 114
RFV+ R G G ++ + + G V V++E + +IR GT WI
Sbjct: 26 RFVS-DELEVGVRNGTGPNSRIISS-VRSGQEVTVLEESGDGHTRIRLPSGTEAWILTRY 83
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
L + S + + D Q +A++
Sbjct: 84 LQDEPH---SRERLEEVEAELAEIRSGADDQEGRIAEL 118
>gi|240949703|ref|ZP_04754038.1| hypothetical protein AM305_12155 [Actinobacillus minor NM305]
gi|240295961|gb|EER46637.1| hypothetical protein AM305_12155 [Actinobacillus minor NM305]
Length = 202
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R G G Y + + G + V+ + + +RD GW+ S +S S
Sbjct: 35 MRKGAGDQYKISGA-IQAGEKITVLDRKDRFVLVRDSRNREGWVLASEISQTAS 87
>gi|47564872|ref|ZP_00235916.1| bifunctional autolysin [Bacillus cereus G9241]
gi|47558245|gb|EAL16569.1| bifunctional autolysin [Bacillus cereus G9241]
Length = 351
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-----NK 112
V ++ + N R GPG Y+V+ + K V+ E W I G WI
Sbjct: 213 VYVEGTNINVRKGPGTNYSVI-RQINKPESYAVLSEKNGWLNI----GDNQWIKYDPSYI 267
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
L + + + +R + + YK P + VA GV+
Sbjct: 268 RLDTKENVSSSIVGHRVLSKVDNLRFYKSPSWEDKDVA----GVV 308
>gi|229150478|ref|ZP_04278694.1| Cell wall hydrolase/autolysin [Bacillus cereus m1550]
gi|228632971|gb|EEK89584.1| Cell wall hydrolase/autolysin [Bacillus cereus m1550]
Length = 328
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDSSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|157148616|ref|YP_001455935.1| putative signal transduction protein [Citrobacter koseri ATCC
BAA-895]
gi|157085821|gb|ABV15499.1| hypothetical protein CKO_04443 [Citrobacter koseri ATCC BAA-895]
Length = 206
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEEK-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N + Q++D G WI L+ S + + + +
Sbjct: 55 EVTLLQTDANTNYAQVKDSTGRTAWIPMKELNSSPSLRIRVPDLENQVKTLTD 107
>gi|30020341|ref|NP_831972.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
gi|229127652|ref|ZP_04256641.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-Cer4]
gi|229144848|ref|ZP_04273245.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST24]
gi|296502818|ref|YP_003664518.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
gi|29895892|gb|AAP09173.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
gi|228638570|gb|EEK95003.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST24]
gi|228655729|gb|EEL11578.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-Cer4]
gi|296323870|gb|ADH06798.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
Length = 328
Score = 42.3 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDSSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|308062534|gb|ADO04422.1| hypothetical protein HPCU_06390 [Helicobacter pylori Cuz20]
Length = 192
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + L K V+V++ +W +I
Sbjct: 119 TPTTPTIGKKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LAKDKSVKVLEIQNDWAKIEF 175
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 176 SNETKGYVFLKLLKK 190
>gi|188528040|ref|YP_001910727.1| hypothetical protein HPSH_06475 [Helicobacter pylori Shi470]
gi|188144280|gb|ACD48697.1| hypothetical protein HPSH_06475 [Helicobacter pylori Shi470]
Length = 192
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + L K V+V++ +W +I
Sbjct: 119 TPTTPTIGKKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LAKDKSVKVLEIQNDWAKIEF 175
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 176 SNETKGYVFLKLLKK 190
>gi|160932747|ref|ZP_02080136.1| hypothetical protein CLOLEP_01588 [Clostridium leptum DSM 753]
gi|156867821|gb|EDO61193.1| hypothetical protein CLOLEP_01588 [Clostridium leptum DSM 753]
Length = 248
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P + + ++ + G + I SG+W + G+ KQ I
Sbjct: 189 QGTVATQQTPLNIRSQPSLSAQVIGQAPKGATVAILGESGDWYQIRYQNITGYSSKQYI 247
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+L+ +L YF + + + + V + + N R P + V+
Sbjct: 163 RNLVLSLTEYFGIPFVPPGGQSQPQRQGT-----VATQQTPLNIRSQPSLSAQVIGQ-AP 216
Query: 84 KGLPVEVVKEYENWRQIR 101
KG V ++ E +W QIR
Sbjct: 217 KGATVAILGESGDWYQIR 234
>gi|124003996|ref|ZP_01688843.1| lipoprotein, putative [Microscilla marina ATCC 23134]
gi|123990575|gb|EAY30055.1| lipoprotein, putative [Microscilla marina ATCC 23134]
Length = 302
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 56/204 (27%), Gaps = 54/204 (26%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------SRIGPGIMYT------ 76
+ + F L + A ++ + V ++ N R P
Sbjct: 7 FIFMAFALLLMTACGGSQKGQSTDSVNNDVNKLTAKVNAPSGLTLRAKPNSDSKQVALLD 66
Query: 77 --VVCTYLTKGLPVE-VVKEYENWRQIRDFDGTIGWINKSLL------------------ 115
L K P E + + NW +I+ G G++ + L
Sbjct: 67 DKSEVEILDKNGPAETIEGKKGNWYKIK-AKGDEGYVFSAFLKLKGQENESEGSQEAEQK 125
Query: 116 SGKR-------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE------ 162
S K+ + + P I L KPD+ S V L + E
Sbjct: 126 SKKKEIDLSKFTRPANEKEAYVAAPSGIRLRSKPDVGSEEVIIAPYDAKLEVVENIDIQQ 185
Query: 163 ---CSGE----WCFGYNLDTEGWI 179
C G W EG++
Sbjct: 186 KPKCIGGMIGRWIKVKYQGKEGYV 209
>gi|220931359|ref|YP_002508267.1| SCP-like extracellular [Halothermothrix orenii H 168]
gi|219992669|gb|ACL69272.1| SCP-like extracellular [Halothermothrix orenii H 168]
Length = 258
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+ L+ + LA+ + + E IF+ + + + N + G G + +
Sbjct: 2 RKLKILIPLILAVLLVSCANESPTQESSIFQIGEV-EYCRVTDDNVNVKAGAGNTFPNIA 60
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T L KG V+V+ E NW +R + +G IN + + +V +
Sbjct: 61 T-LNKGDIVKVMGEMGNWYVVRLDNNQVGCIN----TTDATPVVRDGGEPEKQRRIVEPE 115
Query: 140 KKPDIQSII 148
P+ + +
Sbjct: 116 PAPEAKDDV 124
>gi|257413918|ref|ZP_04744669.2| putative cell wall-associated hydrolase [Roseburia intestinalis
L1-82]
gi|257201813|gb|EEV00098.1| putative cell wall-associated hydrolase [Roseburia intestinalis
L1-82]
Length = 417
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 6/124 (4%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V L E++ +W QI G++ L +AI
Sbjct: 154 INVREVPGTEAEIVGK-LPNNAGCEIIGTDGDWTQIE-SGKVKGYVKSEYLLTGEAAIAK 211
Query: 125 PWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
K T + + + + S ++ + G L + E W EG++
Sbjct: 212 AQEVKQTVATVTTTTLYVRDETNTDSHVITMMPEGEELEVLEVLDGWVKINVDSDEGYVS 271
Query: 181 KQKI 184
+
Sbjct: 272 SDYV 275
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 148 AQADGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 202
>gi|225575089|ref|ZP_03783699.1| hypothetical protein RUMHYD_03178 [Blautia hydrogenotrophica DSM
10507]
gi|225037648|gb|EEG47894.1| hypothetical protein RUMHYD_03178 [Blautia hydrogenotrophica DSM
10507]
Length = 257
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +N+ IV ++PG + + W +G++K++ I
Sbjct: 73 ANKTVYANDNVNVRASAATDGEIVGSLQPGESVTALDNPKDGWVRIQLDGADGYVKEEYI 132
>gi|254362176|ref|ZP_04978292.1| hypothetical protein MHA_1784 [Mannheimia haemolytica PHL213]
gi|261492462|ref|ZP_05989017.1| hypothetical protein COK_0886 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494528|ref|ZP_05991013.1| hypothetical protein COI_0315 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153093745|gb|EDN74688.1| hypothetical protein MHA_1784 [Mannheimia haemolytica PHL213]
gi|261309821|gb|EEY11039.1| hypothetical protein COI_0315 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311878|gb|EEY13026.1| hypothetical protein COK_0886 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 203
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R G G + + + G V V+ E + IRD GW+ S LS S
Sbjct: 35 MRKGAGDQFRISGA-IQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIP 93
Query: 127 NRKTNNPIYINLYKKPDIQ 145
K N K D +
Sbjct: 94 QLKQQVQDLTNRLSKIDTE 112
>gi|317180976|dbj|BAJ58762.1| hypothetical protein HPF32_1180 [Helicobacter pylori F32]
Length = 192
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
KKPL V + S N R P ++ + L K V+V++ +W +I + T
Sbjct: 123 PTIGKKPLEYKVAV--SGVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSNET 179
Query: 107 IGWINKSLLSG 117
G++ LL
Sbjct: 180 KGYVFLKLLKK 190
>gi|308064030|gb|ADO05917.1| hypothetical protein HPSAT_06030 [Helicobacter pylori Sat464]
Length = 192
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + L K V+V++ +W +I
Sbjct: 119 TPTTPTIGKKPLEYKVAV--SGVNVRAFPSTKGKILGS-LAKDKSVKVLEIQNDWAKIEF 175
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 176 SNETKGYVFLKLLKK 190
>gi|297380430|gb|ADI35317.1| Hypothetical protein HPV225_1284 [Helicobacter pylori v225d]
Length = 196
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + L K V+V++ +W +I
Sbjct: 123 TPTTPTIGKKPLEYKVAV--SGVNVRAFPSTKGKILGS-LAKDKSVKVLEIQNDWAKIEF 179
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 180 SNETKGYVFLKLLKK 194
>gi|269137820|ref|YP_003294520.1| putative signal transduction protein [Edwardsiella tarda EIB202]
gi|267983480|gb|ACY83309.1| putative signal transduction protein [Edwardsiella tarda EIB202]
gi|304557875|gb|ADM40539.1| Arylsulfatase [Edwardsiella tarda FL6-60]
Length = 205
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV--VKEYENWRQIRDFDGTIGWINKS 113
RF++ A GPG Y +V T + G PV + + + + QIRD G W+
Sbjct: 26 RFIS-DALSTYVHSGPGNQYRIVGT-INAGDPVTLLGINQQSQFAQIRDAKGRSVWLPLD 83
Query: 114 LLSGKRS 120
LS + S
Sbjct: 84 QLSNQPS 90
>gi|322805532|emb|CBZ03097.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase)
[Clostridium botulinum H04402 065]
Length = 504
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I ++ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSQPSINSKILYK-MAKGAKLPIIGIYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|302344718|ref|YP_003809247.1| hypothetical protein Deba_3300 [Desulfarculus baarsii DSM 2075]
gi|301641331|gb|ADK86653.1| protein of unknown function DUF1058 [Desulfarculus baarsii DSM
2075]
Length = 160
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++++ +A R P + VV T G V +E +W + +G GW+++S L+
Sbjct: 26 MSVQVKQAQLRAQPTFLSPVVAT-AAYGQRVHCDEEKGDWLAVLSQNGDRGWLHRSALTE 84
Query: 118 K 118
K
Sbjct: 85 K 85
Score = 41.5 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQ 182
+ + L +P S +VA G + E G+W GW+ +
Sbjct: 21 AAVQTMSVQVKQAQLRAQPTFLSPVVATAAYGQRVHCDEEKGDWLAVLSQNGDRGWLHRS 80
Query: 183 KI 184
+
Sbjct: 81 AL 82
>gi|293394304|ref|ZP_06638604.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291423282|gb|EFE96511.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 206
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 17/103 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVC 79
+Q + LA+ A + +K R+++ N GPG Y +V
Sbjct: 1 MQKLRLICLAVLSLSITWGAHAEDK---------RYIS---DELNTYVHSGPGNQYRIVG 48
Query: 80 TYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
T L G V ++ ++ + QIRD G WI LS S
Sbjct: 49 T-LNAGDEVTLLSVNDSTKYGQIRDAKGRSVWIPLDQLSETPS 90
>gi|229133084|ref|ZP_04261922.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST196]
gi|228650382|gb|EEL06379.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST196]
Length = 333
Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 211 VNLRSGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 265
Query: 123 VSPWNRKTN--NPIYINLYKKPDIQSIIVAKVE 153
+NL P S ++ K+
Sbjct: 266 SDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLN 298
>gi|229024649|ref|ZP_04181094.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH1272]
gi|228736714|gb|EEL87264.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH1272]
Length = 597
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 34/115 (29%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G W+N T
Sbjct: 293 PSRTGYVVGKYPPQ--TVTVVEENSIWLKIRTSEGLQ-WMN-------PYLKEGEGKELT 342
Query: 131 NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P S + K P G + + W W+ +
Sbjct: 343 YIPREFFAYDSPSFSSRVSGKYAPQGGIEELATRDDGWVQIRTDKGPKWVNMSYL 397
>gi|170735769|ref|YP_001777029.1| SH3 type 3 domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169817957|gb|ACA92539.1| SH3 type 3 domain protein [Burkholderia cenocepacia MC0-3]
Length = 301
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIK 180
V+ L+ P +VA+V P L + C + WC GWI
Sbjct: 22 VADAQSSAYTNSPAELFAGPAPDYPVVAQVPPATALDVFGCLSDYTWCDVALPGVRGWID 81
Query: 181 KQKI 184
Q +
Sbjct: 82 AQLL 85
>gi|89071097|ref|ZP_01158300.1| hypothetical protein OG2516_13801 [Oceanicola granulosus HTCC2516]
gi|89043345|gb|EAR49566.1| hypothetical protein OG2516_13801 [Oceanicola granulosus HTCC2516]
Length = 229
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 43/133 (32%), Gaps = 21/133 (15%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ L + AP++A E + N R GPG + VV
Sbjct: 4 RTLLTASAIALVTAAPVMAAPFEAGVITDL-------------NIRSGPGPDFEVVGVIP 50
Query: 83 TKG-LPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRKTNNPIY 135
G + VE E NW ++ +DGT GW L+ + IV+
Sbjct: 51 EDGNVTVEGCLENGNWCEVT-YDGTTGWSYDQYLAVEAEAEAEERVIVAQRPASVEVETL 109
Query: 136 INLYKKPDIQSII 148
+ D + +
Sbjct: 110 TYEREATDTEQSV 122
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 112 KSLLSGKRSAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--S 164
++LL+ A+V+ + +N+ P +V + +T+ C +
Sbjct: 4 RTLLTASAIALVTAAPVMAAPFEAGVITDLNIRSGPGPDFEVVGVIPEDGNVTVEGCLEN 63
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G WC T GW Q +
Sbjct: 64 GNWCEVTYDGTTGWSYDQYL 83
>gi|305665823|ref|YP_003862110.1| putative peptidase [Maribacter sp. HTCC2170]
gi|88710594|gb|EAR02826.1| putative peptidase [Maribacter sp. HTCC2170]
Length = 397
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 60 IKASRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLL 115
IK S AN R ++ T T G P++V K++ENW I+ D + W++ +
Sbjct: 107 IKISVANLRS--NHAHSAELATQATLGTPIKVFKKFENWYLIQTPDKYLSWVDSGGIQFM 164
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ I + + + + + D S +++ V G +L + + D
Sbjct: 165 DENEANIWRSSKKVIFTSTFGHAFSEKDTNSQVISDVVAGGILEELDEGKLFYRVKFPDG 224
Query: 176 E-GWIKKQ 182
+I+K
Sbjct: 225 RVAFIEKS 232
>gi|262068086|ref|ZP_06027698.1| bacterial SH3 domain protein [Fusobacterium periodonticum ATCC
33693]
gi|291378172|gb|EFE85690.1| bacterial SH3 domain protein [Fusobacterium periodonticum ATCC
33693]
Length = 399
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE---YEN-WRQIRDFDGTIGWINK 112
+V + A AN R P V+ Y + +++V++ N W + D G G+I
Sbjct: 67 YVFVAARSANLREKPDPNAKVIGKYT-YDMKLKLVEKVRYQGNIWYLVEDAKGNRGYIAG 125
Query: 113 SLLSGKR 119
S +
Sbjct: 126 SQTKKRN 132
>gi|228920966|ref|ZP_04084303.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838660|gb|EEM83964.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 323
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 201 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 255
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ K+
Sbjct: 256 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRKLN 288
>gi|162450699|ref|YP_001613066.1| hypothetical protein sce2427 [Sorangium cellulosum 'So ce 56']
gi|161161281|emb|CAN92586.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 311
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+G ++ + T + + P +V ++ G + + +W +
Sbjct: 242 AGTTTSETAVSGLATVSWDTALVRGAPKEG-DVVMRLVRGTRVKLVGRQNDWYKIEHRGK 300
Query: 176 EGWIKKQKI 184
GW+ + I
Sbjct: 301 TGWMYRGAI 309
>gi|114562414|ref|YP_749927.1| hypothetical protein Sfri_1236 [Shewanella frigidimarina NCIMB 400]
gi|114333707|gb|ABI71089.1| protein of unknown function DUF1058 [Shewanella frigidimarina NCIMB
400]
Length = 246
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
GP Y VV + K V V+ + +W ++++ G GW ++ L G
Sbjct: 38 LHSGPSAGYPVVSI-IEKNDIVTVLLKRTSWLKVQNKRGVEGWFHEDNLKG--------- 87
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ I NL D+ I ++E GV+
Sbjct: 88 LSQDGQAINANLITDQDV---INRQIEAGVM 115
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKIWGI 187
+I L+ P +V+ +E ++T+ W N EGW + + G+
Sbjct: 35 FIELHSGPSAGYPVVSIIEKNDIVTVLLKRTSWLKVQNKRGVEGWFHEDNLKGL 88
>gi|302339560|ref|YP_003804766.1| peptidase C14 caspase catalytic subunit p20 [Spirochaeta
smaragdinae DSM 11293]
gi|301636745|gb|ADK82172.1| peptidase C14 caspase catalytic subunit p20 [Spirochaeta
smaragdinae DSM 11293]
Length = 1051
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LP+ +V E ++ + D + + + V N+K + + +
Sbjct: 572 LPLRIVVEDRHFGTLIDKQLDV------PVGRSVGSPVLSINKKVSASQNLVVKSGAAEN 625
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +A + G +L EW GW++K ++
Sbjct: 626 ASQIAVLSEGAVLDTVGELDEWYKVEIYGKYGWVEKSQV 664
>gi|225375033|ref|ZP_03752254.1| hypothetical protein ROSEINA2194_00656 [Roseburia inulinivorans DSM
16841]
gi|225213105|gb|EEG95459.1| hypothetical protein ROSEINA2194_00656 [Roseburia inulinivorans DSM
16841]
Length = 342
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILAL----------SHEKEIFEKKPLPR--FVTIK 61
+ K P+I + L+ L I + A + E + + + VT
Sbjct: 1 MTKNTPRIFISLLLMLLCIGIFPISAFASGGDYPDDTLPAAESSAADTQETKQIGTVTTN 60
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R G G+ T T L G V+V+ +W +I +G++ S L+ +A
Sbjct: 61 GGSLNVRTGAGLDNT-AFTQLPNGTVVDVIGRDGDWVKILLPA-RVGYVYGSYLTVTDAA 118
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 22/69 (31%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S + T N +N+ + + ++ G ++ + G+W
Sbjct: 44 SAADTQETKQIGTVTTNGGSLNVRTGAGLDNTAFTQLPNGTVVDVIGRDGDWVKILLPAR 103
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 104 VGYVYGSYL 112
>gi|210135409|ref|YP_002301848.1| hypothetical protein HPP12_1216 [Helicobacter pylori P12]
gi|210133377|gb|ACJ08368.1| hypothetical protein HPP12_1216 [Helicobacter pylori P12]
Length = 196
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + KKPL V + S N R P ++ L K V+V++ +W +I
Sbjct: 123 TPTTPLIGKKPLEYKVAV--SGVNVRAFPSTKGKILGL-LAKNKSVKVLEIQNDWAKIEF 179
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 180 SNKTKGYVFLKLLKK 194
>gi|23100366|ref|NP_693833.1| hypothetical protein OB2911 [Oceanobacillus iheyensis HTE831]
gi|22778599|dbj|BAC14867.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 1115
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 27/158 (17%)
Query: 31 AIYFYLAPILALSHEKEIFEKKP---------LPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ L+ +++S + + + P L R I + N R P ++ V
Sbjct: 750 TLTQALSKQMSVSPQTDAYRNLPAYVHSSYIDLTRTAAITGTSVNLRTAPQLISKVAFN- 808
Query: 82 LTKGLPVEVVKEYEN--------WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ G +E ++E W +IR + G + +++ SL S
Sbjct: 809 VGNGTEIEFMEEVTGAIYSGSTKWYKIR-YRGQVLYVHSSLASKNTLV--------GKTT 859
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+N+ S + G + I E W
Sbjct: 860 ANVNVRSAKSSSSHKYGVIPKGTTVNIIEEGSTWHEIS 897
>gi|313205226|ref|YP_004043883.1| sh3 type 3 domain protein [Paludibacter propionicigenes WB4]
gi|312444542|gb|ADQ80898.1| SH3 type 3 domain protein [Paludibacter propionicigenes WB4]
Length = 151
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQ 182
N + +NL + + S ++A + G ++ + +EC W EG++ +
Sbjct: 18 IAQNSVRYTTVRLNLREDANASSNVIAVLPRGTVVNVAKECDCAWILVSYEGKEGYVSSK 77
Query: 183 KI 184
+
Sbjct: 78 YL 79
>gi|228962185|ref|ZP_04123641.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228797498|gb|EEM44655.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 146
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I N R GPG Y V+ L KG +V E W + G W+ +
Sbjct: 17 INGDNVNLRKGPGTGYAVI-RKLGKGECYQVWGESNGWLNL----GGDQWVYNDSSYIRY 71
Query: 120 SAIVSPWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ +P K T + + P +V V W
Sbjct: 72 TGENAPAPSKSSIDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYRDGWYNV 131
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 132 ---GGDQWVSGEYV 142
>gi|149278084|ref|ZP_01884223.1| Membrane protein [Pedobacter sp. BAL39]
gi|149231282|gb|EDM36662.1| Membrane protein [Pedobacter sp. BAL39]
Length = 444
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L +G V + N ++ DG++G++ S L + P R T ++ +
Sbjct: 349 LKQGTVVHINAATGNNYRVNLPDGSMGYLKASQLVP----VTRPMERYTVREPETPVFSR 404
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
P + + ++ G +++I G + GWIK
Sbjct: 405 PTTIAAVKQTLKAGEVVSILGTFGAYRLISDANKQTGWIK 444
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+P+ R+ T++ P + V L G V ++ + +R I D + GWI
Sbjct: 386 TRPMERY-TVREPETPVFSRPTTIAAVK-QTLKAGEVVSILGTFGAYRLISDANKQTGWI 443
>gi|284041062|ref|YP_003390992.1| peptidase M23 [Spirosoma linguale DSM 74]
gi|283820355|gb|ADB42193.1| Peptidase M23 [Spirosoma linguale DSM 74]
Length = 446
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + A+++ R+ PG V + K + ++ E+W ++ DG IG++ S
Sbjct: 326 VRVSAAKSVVRLSPGSE-GVALREVPKATALTILGGTESWLRVELPDGLIGYVASSATEA 384
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTE 176
++ R+ P L Q+ + + G L + + + N
Sbjct: 385 EK-----RPLRRLVLPTSKPLLDAAYAQAATITTLPTGAALEVLATADAFQLVRNEAGQT 439
Query: 177 GWI 179
GW+
Sbjct: 440 GWV 442
>gi|225685370|ref|YP_002729771.1| bacteriolytic enzyme [Persephonella marina EX-H1]
gi|225646790|gb|ACO04975.1| bacteriolytic enzyme [Persephonella marina EX-H1]
Length = 157
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GPG+ Y V +L KG V + W +I + + GW++ L
Sbjct: 102 NVRKGPGMNYEV-FAWLKKGAVVSGTVKKGKWLKILNPN---GWVSSKFL 147
>gi|148658333|ref|YP_001278538.1| restriction endonuclease [Roseiflexus sp. RS-1]
gi|148570443|gb|ABQ92588.1| restriction endonuclease [Roseiflexus sp. RS-1]
Length = 368
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA--------SRANSRIGPGIMYTVVCTYLTKGL 86
P S E+ P P + + N R P + TV+ + G
Sbjct: 264 LPLPTQTPSSEEPQPTALPTPTVAPTEPPVPTTTVFNGGNVRAAPNMRGTVL-DQVHAGE 322
Query: 87 PVEVVKE--YENWRQIRDFDGTIGWINKSLLS 116
VE++ NW IR+ G +GW +++LL+
Sbjct: 323 IVELLGRSADGNWLYIRNPRGQVGWTHRTLLT 354
>gi|315633918|ref|ZP_07889207.1| signal transduction protein [Aggregatibacter segnis ATCC 33393]
gi|315477168|gb|EFU67911.1| signal transduction protein [Aggregatibacter segnis ATCC 33393]
Length = 203
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q +L LA++ + + A E ++VT S R G G + + T
Sbjct: 1 MQKALSTLLALFCFTVGMSAAQGET---------KYVTENLST-FLRKGAGEQFKIAGT- 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ G V V+ + + + +RD WI S LS S+
Sbjct: 50 IQAGEAVTVLDKKDRYTLVRDSKNREAWILSSELSTNASS 89
>gi|254464618|ref|ZP_05078029.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206685526|gb|EDZ46008.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 217
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQK 183
+ +NL P Q I+ + + + C WC EGW +
Sbjct: 22 AGAQVQAVTDLNLRAGPGPQHEIIGVISKDGAVKLDGCLEQSNWCKVGYDGAEGWAYGEY 81
Query: 184 I 184
+
Sbjct: 82 L 82
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R GPG + ++ G V++ E NW ++ +DG GW L+ +
Sbjct: 33 NLRAGPGPQHEIIGVISKDGA-VKLDGCLEQSNWCKV-GYDGAEGWAYGEYLTATVT 87
>gi|225375151|ref|ZP_03752372.1| hypothetical protein ROSEINA2194_00775 [Roseburia inulinivorans DSM
16841]
gi|225213025|gb|EEG95379.1| hypothetical protein ROSEINA2194_00775 [Roseburia inulinivorans DSM
16841]
Length = 318
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
Y+ + D + IV K+ G + I+E W + + +G++
Sbjct: 156 DYLYVRASADADAEIVGKLYKGDVAEIQEEGSGWTHVASGNVDGYV 201
>gi|225386625|ref|ZP_03756389.1| hypothetical protein CLOSTASPAR_00373 [Clostridium asparagiforme
DSM 15981]
gi|225047323|gb|EEG57569.1| hypothetical protein CLOSTASPAR_00373 [Clostridium asparagiforme
DSM 15981]
Length = 358
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G+ YT T L G V+V+ +W ++ + +G++
Sbjct: 92 NVRTGAGMDYT-AFTQLPNGTTVKVIGTDGDWLKVILPE-KVGYVYS 136
>gi|294139301|ref|YP_003555279.1| hypothetical protein SVI_0530 [Shewanella violacea DSS12]
gi|293325770|dbj|BAJ00501.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 180
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSA---- 121
GPG Y ++ + + G + ++ E N+ +I D G GW+ +++ K+S
Sbjct: 23 LHGGPGTQYRILGS-IEAGQAISLLGETQGNYSKIIDHKGREGWVETKMVTRKKSFRQQL 81
Query: 122 -IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
V KT + + NL D + +++K++
Sbjct: 82 PEVQAELDKTKSELEQNL-SSSDNNTQLLSKLK 113
>gi|194431661|ref|ZP_03063952.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194420017|gb|EDX36095.1| conserved hypothetical protein [Shigella dysenteriae 1012]
Length = 206
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEET-------RYVS---DELNTWVRSGPGDHYRLVGT-VNTGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
V +++ N + Q++D G WI LS + S
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPS 90
>gi|331092055|ref|ZP_08340886.1| hypothetical protein HMPREF9477_01529 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402256|gb|EGG81827.1| hypothetical protein HMPREF9477_01529 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 603
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 116 SGKRSAIVSPWN--RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
S R I S W+ + + + ++S I+ + + ++ I E G+W N
Sbjct: 172 SPNRIVIQSDWSDAKVATTKNNSAIRMRAGVKSPILTETKSDDVVRIIEKEGKWRKVRTN 231
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
G+IK+ + E K
Sbjct: 232 DGFVGYIKQSDL----KDEKTK 249
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T K + A R+ G+ ++ T V ++++ WR++R DG +G+I +S L
Sbjct: 188 ATTKNNSA-IRMRAGVKSPIL-TETKSDDVVRIIEKEGKWRKVRTNDGFVGYIKQSDLKD 245
Query: 118 KRS 120
+++
Sbjct: 246 EKT 248
>gi|258593010|emb|CBE69321.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 179
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ +L S KP FV K + R+GP V + +G VEV
Sbjct: 3 ALILIGVLLVASASAYAQATKPGTYFV--KEAVLQVRLGPSATAPVT-NRIYRGQKVEVF 59
Query: 92 KEYENWRQIRDF-----DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ W ++ F +G G + + +L+ S P + + + K
Sbjct: 60 EVKSGWVRVSKFYDGFVEGQSGKVARWVLATGLSTTAPPELPQPSLSSDSRIAKGA 115
>gi|238760049|ref|ZP_04621200.1| hypothetical protein yaldo0001_2890 [Yersinia aldovae ATCC 35236]
gi|238701736|gb|EEP94302.1| hypothetical protein yaldo0001_2890 [Yersinia aldovae ATCC 35236]
Length = 206
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + L I A + EK R+++ + GPG Y +V T
Sbjct: 1 MQKLRLICLTILSLSLSWGANAEEK---------RYISDELDT-YVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V ++ + N+ QIRD G WI + LS S + + + +
Sbjct: 50 LKGGDEVTLISVDDGTNYGQIRDSKGKTTWIPLNQLSEMPSLRIRVPDLEQQVKTLTD 107
>gi|327539878|gb|EGF26481.1| dipeptidyl peptidase VI [Rhodopirellula baltica WH47]
Length = 404
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 17/135 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ S + R P +V L G P+ ++K I+ DG IGW+N +
Sbjct: 106 VNNSVIHLRREPSSKTELVTQAL-LGTPIRILKTERGKCLIQVPDGYIGWVNSAEVHRVD 164
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
L R A + Y PD S+ + + G ++ + E SG +
Sbjct: 165 QEQLRSYRDA-----EKVVFTAQSGLAYSAPDATSMPMTDLVIGNMVCKVSEQSG-FTQI 218
Query: 171 YNLDTE-GWIKKQKI 184
D GW+ ++
Sbjct: 219 RYPDGRIGWVDSSQL 233
>gi|323339421|ref|ZP_08079703.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
gi|323093132|gb|EFZ35722.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
Length = 269
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ GPG + +L K + V +W ++ +G GWI +++
Sbjct: 31 LKEGPGTEFPQKS-FLKKEQRLTVYSRKNHWLHVKTDNGKTGWIADWMIAD 80
>gi|320325068|gb|EFW81137.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 224
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M H +L + + L + +F A+ + P A + + R+V+
Sbjct: 1 MSRHFSALLSRAPGLFAVSRRLLGAGLFGAALT-VVVPGNAQAAGSD--------RWVS- 50
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R GP + +V T L G VE++ + Q+R G+ WI + L
Sbjct: 51 GSLTTYVRSGPTDDHRIVGT-LKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|227486161|ref|ZP_03916477.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235792|gb|EEI85807.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 134
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S +V++V P +L + E + W G+I+ +
Sbjct: 80 EDTVNMRLAPSENSAVVSEVGPDDEILNLGE-TEGWTRVTVNGKTGYIRSDLL 131
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
N R+ P VV + + + E E W ++ +G G+I LL+
Sbjct: 81 DTVNMRLAPSENSAVVSE-VGPDDEILNLGETEGWTRVT-VNGKTGYIRSDLLTKN 134
>gi|114707783|ref|ZP_01440677.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
gi|114536772|gb|EAU39902.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
Length = 1068
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 14/106 (13%)
Query: 92 KEYENWRQIRDFD----GTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
W Q+R + G GW++ + + A + N + +NL P
Sbjct: 6 GRSGPWMQVRVANTANVGVTGWVHSGYVGCCFETPASLGEGRAAHPNGVALNLRSAPGFG 65
Query: 146 SIIVAKVEPGVLLTI-------RECSGEWCFGYNLDTEGWIKKQKI 184
+ V P + + WC GWI + +
Sbjct: 66 GNVNGSV-PSEVADLPIANCIAESAERSWCETVYNGRRGWISTRYL 110
>gi|311695037|gb|ADP97910.1| conserved hypothetical protein, secreted [marine bacterium HP15]
Length = 250
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 30 LAIYFYLAPILALSHEK---EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+AI +L + A S E L V + + R GP Y V KG
Sbjct: 3 IAILMFLLLLPAQSWAGWLWGQAEDDALK--VQVAEPYVSWRTGPATGYPV-FHTSEKGE 59
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ +++ +W ++ D G GWI + ++
Sbjct: 60 WLTILQRKTSWIKVTDTRGREGWIAVADIAQT 91
>gi|332298604|ref|YP_004440526.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181707|gb|AEE17395.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 305
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 11/68 (16%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----------WRQIRDFDGTIG 108
TI SR R P + + Y+ KG V+++ + W + +GT G
Sbjct: 237 TINDSRVRVRSEPNLKCETL-DYVNKGDSVKILDRSTDKQQIGDMNDYWYNVELQNGTKG 295
Query: 109 WINKSLLS 116
W+ + +
Sbjct: 296 WVYGAYID 303
>gi|327441372|dbj|BAK17737.1| beta- N-acetylglucosaminidase [Solibacillus silvestris StLB046]
Length = 669
Score = 41.9 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Query: 57 FVTIKASR-ANSRIGPGIMYTVVCTYLTK--------GLPVEVVKEYEN-----WRQI-- 100
FV+ + N R P V TY K G P+ +V+E + W +I
Sbjct: 588 FVSYENGLLVNVRNEPSTASPVHFTYKAKYVGETGVFGYPISIVEETKGTDGYVWYKIMS 647
Query: 101 -RDFDGTIGWINKSLL 115
+ GW+ L+
Sbjct: 648 DNNPPEKYGWVRSDLV 663
>gi|319782129|ref|YP_004141605.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168017|gb|ADV11555.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 306
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C WC GWI K I
Sbjct: 254 AVTMRSGPKKNAAAIGTVPAKTSVQVMSCKK-WCQITYNGKTGWIYKSYI 302
>gi|90407228|ref|ZP_01215415.1| hypothetical protein PCNPT3_00735 [Psychromonas sp. CNPT3]
gi|90311651|gb|EAS39749.1| hypothetical protein PCNPT3_00735 [Psychromonas sp. CNPT3]
Length = 203
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +AI + L+ + R+V+ GPG+ Y + T
Sbjct: 1 MKTIKYLLVAITLTFSFSLSAAT-----------RYVS-DNIFIYLHSGPGLDYRITGT- 47
Query: 82 LTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSA 121
+ G P++ +K N + +I+ +G GW+ + L A
Sbjct: 48 VKVGTPLKTLKYDSNSKFMKIKLPNGREGWVKNNELQTTPPA 89
>gi|49478176|ref|YP_037434.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329732|gb|AAT60378.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 539
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 41/124 (33%), Gaps = 26/124 (20%)
Query: 2 FTHAEKILYS--------------LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKE 47
FT +I+Y + Y+PK I L I + +K
Sbjct: 415 FTDKGQIIYKEAVQRLYGLGIVTGMGDNLYVPKGTTTRGETAAFILNMLQVIETGNVQKG 474
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
I V I N R G G Y+VV +KG V +E W +I GT
Sbjct: 475 IGT-------VEINGIGVNVRSGAGSSYSVV-RKASKGEKATVYEEKNGWLRI----GTG 522
Query: 108 GWIN 111
W+
Sbjct: 523 EWVY 526
>gi|253582160|ref|ZP_04859383.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835699|gb|EES64237.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 395
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Query: 7 KILYSLDLRKYMPKILQNSL-----IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK 61
+IL + + +M S T+AIY P + +EK + +V ++
Sbjct: 9 RILKTALISLFMIGTAAFSFDGDASWTTVAIYDNEMPENIILNEKYSGGHPKVLDYVFVR 68
Query: 62 ASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGK 118
AN R P ++ Y K +E V +Y N W ++ DG +G+I S++ K
Sbjct: 69 TRTANLRDLPSTKGKIIKKFNYDAKLKALEKVYDYGNYWYKVETKDGEVGYI-SSMVVRK 127
Query: 119 R 119
R
Sbjct: 128 R 128
>gi|229015231|ref|ZP_04172268.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228746072|gb|EEL96038.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 350
Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
N R G G Y++V +KG V V +E W +I T W+
Sbjct: 298 VNVRSGAGTNYSIV-RKASKGEKVTVYEEKNGWLRIE----TNQWVY 339
>gi|283836416|ref|ZP_06356157.1| arylsulfatase [Citrobacter youngae ATCC 29220]
gi|291067790|gb|EFE05899.1| arylsulfatase [Citrobacter youngae ATCC 29220]
Length = 206
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 13/110 (11%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVE 89
I F L + A + + R+V+ N R GPG Y +V T + G V
Sbjct: 7 IGFTLLALSATAVSHAEEK-----RYVS---DELNTWVRSGPGDNYRLVGT-VNAGEEVT 57
Query: 90 VVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+++ N + Q++D G WI L+ S + + +
Sbjct: 58 LLQTDANTNYAQVKDSTGRTAWIPLKELNSTPSLRTRVPDLENQVKTLTD 107
>gi|221633547|ref|YP_002522773.1| hypothetical protein trd_1571 [Thermomicrobium roseum DSM 5159]
gi|221155480|gb|ACM04607.1| hypothetical protein trd_1571 [Thermomicrobium roseum DSM 5159]
Length = 163
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 10/100 (10%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI----KASRANSRIGPGIMY 75
+ ++ T A+ P P + + S+ N R GPG Y
Sbjct: 55 PAVTPTVTGTPAVTPAALAPRPSPTPVASPAVTPTPAWQATHRVAQGSQVNFRAGPGTQY 114
Query: 76 TVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWI 110
VV L G + + E E W + DG GWI
Sbjct: 115 QVVAV-LEPGTELRFLGEQEQVGNATWLHLELPDGRDGWI 153
>gi|298292243|ref|YP_003694182.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928754|gb|ADH89563.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 423
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + + G + + C G WC G+I K +
Sbjct: 354 RRTVTMRAAPKKGATPIGNLSAGEKVQLVACRG-WCEVIAEGKRGFIYKSFV 404
>gi|118590197|ref|ZP_01547600.1| hypothetical protein SIAM614_11803 [Stappia aggregata IAM 12614]
gi|118437169|gb|EAV43807.1| hypothetical protein SIAM614_11803 [Stappia aggregata IAM 12614]
Length = 405
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + + + ++A + G + C WC G++ + +
Sbjct: 351 VNLREAQNKDAAVLAVIPAGTEVRYSACGNWWCGVQYDGKTGYVGESFL 399
>gi|229078101|ref|ZP_04210695.1| 3D domain protein [Bacillus cereus Rock4-2]
gi|228705208|gb|EEL57600.1| 3D domain protein [Bacillus cereus Rock4-2]
Length = 102
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ L K +E + +W Q ++G +++ L+GK
Sbjct: 20 VTANVLNVRAGANTDSEILGK-LKKDDVIETTHQVQNDWIQFE-YNGKTAYVHVPYLTGK 77
Query: 119 RSAIVSPWNRKTNN---PIYINLYK 140
V P + I + L K
Sbjct: 78 APVKVQPVAKVEKTTQFKIQLKLRK 102
>gi|254502449|ref|ZP_05114600.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222438520|gb|EEE45199.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 146
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WC 168
++L+ + S +N+ P ++ + G +T+ C+ + WC
Sbjct: 23 AAAVLTITPALAQSGGPAIAYTTANLNMRAGPGTNYPVLTTLPQGAGVTVFGCTADFQWC 82
Query: 169 FGYNLDTEGWIKKQKI-WGIY 188
+GW+ + + +G+
Sbjct: 83 DAAFTTVKGWVSGKYLSYGVQ 103
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
++L + A + P LA S + + N R GPG Y V
Sbjct: 11 FLRMLNRFAMALAAAVLTITPALAQSGGPA----------IAYTTANLNMRAGPGTNYPV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGT--IGWINKSLLS 116
+ T L +G V V ++ Q D T GW++ LS
Sbjct: 61 LTT-LPQGAGVTVFGCTADF-QWCDAAFTTVKGWVSGKYLS 99
>gi|154497935|ref|ZP_02036313.1| hypothetical protein BACCAP_01915 [Bacteroides capillosus ATCC
29799]
gi|150272925|gb|EDN00082.1| hypothetical protein BACCAP_01915 [Bacteroides capillosus ATCC
29799]
Length = 255
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + + Y+N+ +PD + ++AK G LT+ W G+
Sbjct: 189 VPAKQGVVDVSWGYLNIRSRPDTSAQVIAKAYDGARLTVINQWQGWYLVQFDGVVGYASS 248
Query: 182 QKI 184
I
Sbjct: 249 DFI 251
>gi|296122864|ref|YP_003630642.1| SH3 type 3 domain protein [Planctomyces limnophilus DSM 3776]
gi|296015204|gb|ADG68443.1| SH3 type 3 domain protein [Planctomyces limnophilus DSM 3776]
Length = 579
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L + F +A + + + I + P TI R GPG Y V T L +G V
Sbjct: 22 FLCLTFLIATLSLCASSQSIAADRTFPYIATIDVDAEPVRSGPGPRYDVT-TDLPRGSQV 80
Query: 89 EVVKEY-ENWRQIRDFDGTIGWINK 112
V + W I G+ WI
Sbjct: 81 TVHRHDPGGWVMIAPPAGSFSWIAA 105
>gi|254490157|ref|ZP_05103348.1| hypothetical protein MDMS009_490 [Methylophaga thiooxidans DMS010]
gi|224464643|gb|EEF80901.1| hypothetical protein MDMS009_490 [Methylophaga thiooxydans DMS010]
Length = 224
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 12/101 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + L P A + R+V+ R G G+ +++
Sbjct: 1 MKKFISRILIAATLCMPFFAYAQTT---------RYVS-DELEITMRNGQGVQFSIR-KM 49
Query: 82 LTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSA 121
L G ++V++ + ++R +G GW+ LS SA
Sbjct: 50 LESGTRLDVLETDPAGYSKVRTSEGVEGWVLTRYLSNSPSA 90
>gi|163759382|ref|ZP_02166468.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162283786|gb|EDQ34071.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 214
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
A + + + +NL P +V V G + C + WC GW
Sbjct: 4 ATTASASTVAVSTANVNLRAGPATSYPVVTVVPQGARIVTHGCVADYRWCDVAFGIYRGW 63
Query: 179 IKKQKIWGIYPG 190
+ I IY G
Sbjct: 64 VSASYIQVIYKG 75
>gi|172058484|ref|YP_001814944.1| cell wall hydrolase/autolysin [Exiguobacterium sibiricum 255-15]
gi|171991005|gb|ACB61927.1| cell wall hydrolase/autolysin [Exiguobacterium sibiricum 255-15]
Length = 493
Score = 41.9 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
NW ++ ++ G+++ + L V+ + +N P ++ +
Sbjct: 141 RDGNWYKVT-YNNKTGFVSGAYLKK-----VTASSTAYTTTERLNFRTAPTTSGALLMTI 194
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ S W G++ +
Sbjct: 195 PSNQVVQSLSVSSNWHKISYGGKTGYVMGTYL 226
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 3/122 (2%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R + + T K + +W + +G G++ L+ S
Sbjct: 44 DLLNLRSSDSVSSKKLTTIPKK-TSLTSNYRIGDWYLVT-HNGKTGYVLGQYLTKVVSG- 100
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ ++L + S+ + + +T G W + G++
Sbjct: 101 TAFAKTAYQTTDALSLRQDASTSSVRLLTIPVKTTVTSSFRDGNWYKVTYNNKTGFVSGA 160
Query: 183 KI 184
+
Sbjct: 161 YL 162
>gi|330683926|gb|EGG95694.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU121]
Length = 291
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG E + + W ++++ G GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGDTFEKIDKSGKWIEVKNKAGDEKGWVAGW 100
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + SG+W D +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGDTFEKIDKSGKWIEVKNKAGDEKGWVA 98
>gi|239637563|ref|ZP_04678535.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus warneri L37603]
gi|239596781|gb|EEQ79306.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus warneri L37603]
Length = 291
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG E + + W ++++ G GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGDTFEKIDKSGKWIEVKNKAGDEKGWVAGW 100
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + SG+W D +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGDTFEKIDKSGKWIEVKNKAGDEKGWVA 98
>gi|254453208|ref|ZP_05066645.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
gi|198267614|gb|EDY91884.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
Length = 147
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
P++ ++ +A+ L + +P + SR N +GPG + V+
Sbjct: 45 PEVSDADVLRAVALVVALDTVEPDVIAVVETVVEPELDIRAVAGSRVNLHMGPGTGFEVI 104
Query: 79 CTYLTKGLPVEVVK-EYENWRQIRDFD-GTIGWINKSLLSGKRS 120
T L G +EV+ + + W + D G GW+ + LLS +
Sbjct: 105 TT-LDGGTKIEVLDVDADGWANVSTVDRGIEGWMAERLLSDPET 147
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WC 168
+ +++ + + + + +NL+ P ++ ++ G + + + + W
Sbjct: 65 VEPDVIAVVETVVEPELDIRAVAGSRVNLHMGPGTGFEVITTLDGGTKIEVLDVDADGWA 124
Query: 169 FGYN--LDTEGWIKKQKI 184
EGW+ ++ +
Sbjct: 125 NVSTVDRGIEGWMAERLL 142
>gi|302342092|ref|YP_003806621.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
gi|301638705|gb|ADK84027.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
Length = 256
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ S + A+ L+ ++A + +V+ + R P + VV Y
Sbjct: 1 MKLSRLACGALLAILSVVIAGPTALAGEKL-----WVS-DQLQLTMRAQPTLDGRVVG-Y 53
Query: 82 LTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAI 122
+ G +V + E+ W ++R DG GW+ K L +R A+
Sbjct: 54 VRTGEWADVQETNEDGWSRVRLADGKEGWLQKRYLLSERPAM 95
>gi|257065766|ref|YP_003152022.1| SH3 type 3 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256797646|gb|ACV28301.1| SH3 type 3 domain protein [Anaerococcus prevotii DSM 20548]
Length = 141
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 18/52 (34%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S IV + PG + + W G+IK +
Sbjct: 86 EDIVNIRLDPTTDSEIVGEAHPGDEILVLLEKDGWSRVSVNGQAGYIKSDLL 137
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R+ P +V G + V+ E + W ++ +G G+I LL
Sbjct: 87 DIVNIRLDPTTDSEIVGE-AHPGDEILVLLEKDGWSRVS-VNGQAGYIKSDLL 137
>gi|229170609|ref|ZP_04298256.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
gi|228612868|gb|EEK70046.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
Length = 337
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SL 114
FV I N R GP I +V+ L KG +V + NW I G WI S
Sbjct: 201 FVYIGGFNVNLRSGPSIGNSVI-RKLQKGETYKVGGKVGNWLNI----GGNQWIYYDSSY 255
Query: 115 LS-GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ A R + + Y+ P Q VA + G L + +
Sbjct: 256 IRYDGEEASTIAGKRAISKVNNLRFYESPSWQDKDVAGLVDGGLGFVIDAK 306
>gi|228952595|ref|ZP_04114671.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228807061|gb|EEM53604.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 191
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L S +A F +AP + + + K + I N R GP +V+
Sbjct: 29 LSQSYANGIAAIFGVAPNPQPPNPQPTPQTKGIAY---ILGKNVNLRNGPSTSSSVI-RQ 84
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIV--SPWNRKTNNPIYIN 137
L V +E W + G W+ S ++ +++ SP + +N
Sbjct: 85 LNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSNSDGSPIGVAYIQGMNVN 140
Query: 138 LYKKPDIQSIIVAKVE 153
L P S ++ ++
Sbjct: 141 LRSGPSTTSAVIRQLN 156
>gi|296127475|ref|YP_003634727.1| hypothetical protein Bmur_2458 [Brachyspira murdochii DSM 12563]
gi|296019291|gb|ADG72528.1| protein of unknown function DUF1058 [Brachyspira murdochii DSM
12563]
Length = 227
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ +++ + ++ K N+ + L+I F++ I+ S+ VTI AN
Sbjct: 129 VFFTMLIVLFIKKKKINNFLILLSIVFFIPLIILSSYANSD-------YIVTI--DNANL 179
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-IGWINKS 113
G +V +++G + V++E++NW +G GWINKS
Sbjct: 180 YSGSSTKSDIVSQ-ISEGEKLRVIEEHDNWYY---AEGNFRGWINKS 222
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
NLY +S IV+++ G L + E W + + GWI K
Sbjct: 175 DNANLYSGSSTKSDIVSQISEGEKLRVIEEHDNWYYAE-GNFRGWINKSS 223
>gi|255101938|ref|ZP_05330915.1| putative cell-wall hydrolase [Clostridium difficile QCD-63q42]
gi|255307806|ref|ZP_05351977.1| putative cell-wall hydrolase [Clostridium difficile ATCC 43255]
Length = 235
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
IL+ + L A++ P+ V + N R G VV
Sbjct: 10 ILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASANDAVVGK 68
Query: 81 YLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ G VEV++ + W +I+ D GW+N L+
Sbjct: 69 -INTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDYLT 104
>gi|206976979|ref|ZP_03237880.1| S-layer domain protein [Bacillus cereus H3081.97]
gi|206744784|gb|EDZ56190.1| S-layer domain protein [Bacillus cereus H3081.97]
Length = 875
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 594 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 639
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + E G W + W+ K I
Sbjct: 640 VSGRYAPQTVEVYGERDGGWIQIQTSNGLKWVNKGNI 676
>gi|90418009|ref|ZP_01225921.1| hypothetical protein SI859A1_02147 [Aurantimonas manganoxydans
SI85-9A1]
gi|90337681|gb|EAS51332.1| hypothetical protein SI859A1_02147 [Aurantimonas manganoxydans
SI85-9A1]
Length = 243
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDTEGWIKKQKI 184
+ +N + + IV+ + + + +C G WC GWI ++ +
Sbjct: 171 VRLNARAEARPDAPIVSTIPANTCVVVDQCTTASDGLWCKAQVASYTGWIPQKAV 225
>gi|15602113|ref|NP_245185.1| hypothetical protein PM0248 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720476|gb|AAK02332.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 203
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+VT S R G G Y + + G V V+ + + + IRD WI S L
Sbjct: 26 RYVTENLST-FLRKGAGEQYKIAGA-IRAGEAVTVLDQKDRYTLIRDSKNRDAWILTSEL 83
Query: 116 SGKRSA 121
+ S+
Sbjct: 84 TSTPSS 89
>gi|332674053|gb|AEE70870.1| bacterial SH3 domain protein [Helicobacter pylori 83]
Length = 195
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 124 STPTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 180
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 181 ETKGYVFLKLLKK 193
>gi|317178456|dbj|BAJ56244.1| hypothetical protein HPF30_0147 [Helicobacter pylori F30]
Length = 192
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 121 STPTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 177
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 178 ETKGYVFLKLLKK 190
>gi|315587141|gb|ADU41522.1| bacterial SH3 domain protein [Helicobacter pylori 35A]
Length = 200
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 129 STPTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 185
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 186 ETKGYVFLKLLKK 198
>gi|261838573|gb|ACX98339.1| hypothetical protein KHP_1146 [Helicobacter pylori 51]
Length = 200
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 129 STPTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 185
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 186 ETKGYVFLKLLKK 198
>gi|241895560|ref|ZP_04782856.1| N-acetylmuramoyl-L-alanine amidase [Weissella paramesenteroides
ATCC 33313]
gi|241871138|gb|EER74889.1| N-acetylmuramoyl-L-alanine amidase [Weissella paramesenteroides
ATCC 33313]
Length = 294
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL-PRFVTIKASRANSRIGPGIMYT 76
M K++Q ++ + + L ++ + L + +T++ R G+
Sbjct: 1 MKKLVQLMRLWLMKFWVPLTIVIVMLGTAVSLTVVLLHKQQITVQIPNLTLRKQKGVESA 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ L KG ++++K+ E W ++R D + GW+ LL
Sbjct: 61 PISV-LKKGEHLQILKKSEGWYEVRREDESTGWVAGWLL 98
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGW 178
+ ++ + T + L K+ ++S ++ ++ G L I + S W D + GW
Sbjct: 33 TVVLLHKQQITVQIPNLTLRKQKGVESAPISVLKKGEHLQILKKSEGWYEVRREDESTGW 92
Query: 179 IK 180
+
Sbjct: 93 VA 94
>gi|229162151|ref|ZP_04290121.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus R309803]
gi|228621308|gb|EEK78164.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus R309803]
Length = 592
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
+ N R G G+ + VV +KG +V+ + W ++ G WI +
Sbjct: 351 VNGDGINVRSGAGLEHRVV-RKASKGDRYKVLAVKDGWYKV----GNGEWIFYNQ 400
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P N IN+ ++ +V K G + W N + WI +
Sbjct: 345 PSMELVVNGDGINVRSGAGLEHRVVRKASKGDRYKVLAVKDGWYKVGNGE---WIFYNQS 401
Query: 185 W 185
W
Sbjct: 402 W 402
>gi|303240104|ref|ZP_07326625.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
gi|302592373|gb|EFL62100.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
Length = 316
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Query: 73 IMYTVVCTYLTKGL---PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP--WN 127
+ +T+GL PV +++E + W +++ DG GW+ + +++ +
Sbjct: 62 KEAKIDSERITQGLFNQPVTLIEESDGWAKVKTVDGCTGWLRSKFIDRDCTSVKEEIYSS 121
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIK 180
R ++ S + + G I+ + GW++
Sbjct: 122 RIVITGKTKPVFASYG-GSATLKEAVMGTEFFIKGKRKNYYEVVVPGNLTGWVE 174
>gi|153870170|ref|ZP_01999624.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152073363|gb|EDN70375.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 196
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 95 ENWRQIRDFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ W +I + G GW+N + L + + S K +N+ + P +S VAK+
Sbjct: 95 DKWVKI-AYQGVQGWVNLNYLKHNLESSCGTYYKVVKVRRGDVLNMRQFPTTRSGKVAKI 153
Query: 153 EPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ + S W F T+GW+ +
Sbjct: 154 PYNQECLVGLDKSSRWVFLDYEGTKGWVYSSYL 186
>gi|86143683|ref|ZP_01062059.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
MED217]
gi|85829726|gb|EAQ48188.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
MED217]
Length = 257
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + +F + ++ A + P + L +G V V++ +W+ IR DG
Sbjct: 187 QAQSNEKNKQFAIVFSAEAEIKSEPNLASEEAFV-LHEGTKVRVLETEGDWQMIRLADGK 245
Query: 107 IGWI 110
GWI
Sbjct: 246 EGWI 249
>gi|229011776|ref|ZP_04168957.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228749407|gb|EEL99251.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 281
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
VTI S N R GPG Y V+ L K V KE W I D
Sbjct: 221 VTITGSGVNLRKGPGTTYEVI-RKLNKNESYSVYKEQNGWLSIGD 264
>gi|229069782|ref|ZP_04203065.1| Cell wall hydrolase/autolysin [Bacillus cereus F65185]
gi|228713317|gb|EEL65209.1| Cell wall hydrolase/autolysin [Bacillus cereus F65185]
Length = 328
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 9/96 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKR 119
N R GP +V+ L V +E W + G W+ S ++ +
Sbjct: 203 GENVNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVK 257
Query: 120 SAIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ SP + +NL P S ++ ++
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|160880516|ref|YP_001559484.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160429182|gb|ABX42745.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 364
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 30/160 (18%)
Query: 50 EKKPLPRFVTIKA--SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ +P + I N R G Y +V + V++ + W +I+
Sbjct: 65 TQISIPENIAIAKCNDYVNIREKAGTSYNIVGILTKDSYGI-VLEVTDGWAKIQ-SGSVT 122
Query: 108 GWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDI------------------- 144
G+++ L G A T +N+ K+P
Sbjct: 123 GYVSTDYLYMGTEGVAKAKELASLLATVTANSVNVRKEPSTLTRDNIIEEVVKGEDLAVL 182
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +V K +PG +L ++ + + G++ K +
Sbjct: 183 SAEVVTKNDPGAVLWVKVALDD---SEGEEVIGYVAKDYV 219
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNN-PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+LLS + I P N Y+N+ +K IV + + E + W
Sbjct: 59 YTTLLS---TQISIPENIAIAKCNDYVNIREKAGTSYNIVGILTKDSYGIVLEVTDGWAK 115
Query: 170 GYNLDTEGWIKKQKIW 185
+ G++ ++
Sbjct: 116 IQSGSVTGYVSTDYLY 131
>gi|228953959|ref|ZP_04115994.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228805716|gb|EEM52300.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 312
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 37/139 (26%), Gaps = 22/139 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINKSL- 114
V I N R GPG Y + P +V W + G W+ ++
Sbjct: 180 VYITGQNVNLRKGPGTQYDSI---RKLNAPENYKVWGRSGGWLNL----GGDQWVYENSE 232
Query: 115 -----LSGKRSAIVSPWNRK----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
G+ S P N T + + P +V V
Sbjct: 233 WLHFEADGQSSTTSQPSNDGLGVVTITADVLRVRTGPGTNYGVVKNVHQSERYQSWGYRD 292
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W + W+ + +
Sbjct: 293 GWYNV---GGDQWVSGEYV 308
>gi|32476799|ref|NP_869793.1| pipeptidyl-peptidase VI [Rhodopirellula baltica SH 1]
gi|32447345|emb|CAD77171.1| pipeptidyl-peptidase VI [Rhodopirellula baltica SH 1]
Length = 404
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 17/135 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ S + R P +V L G P+ ++K I+ DG IGW+N +
Sbjct: 106 VNNSVIHLRREPSSKTELVTQAL-LGTPIRILKTERGKCLIQVPDGYIGWVNSAEVHRID 164
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG 170
L R A + Y PD S+ + + G ++ + E SG +
Sbjct: 165 QEQLRSYRDA-----EKVIFTAQSGLAYSAPDATSMPMTDLVIGNIVCKVSEQSG-FTQI 218
Query: 171 YNLDTE-GWIKKQKI 184
D GW+ +++
Sbjct: 219 QYPDGRIGWVDSRQL 233
>gi|84687459|ref|ZP_01015336.1| hypothetical protein 1099457000263_RB2654_17916 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664484|gb|EAQ10971.1| hypothetical protein RB2654_17916 [Rhodobacterales bacterium
HTCC2654]
Length = 244
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY--ENWRQIRDFDGTIGWINKSLLSGK 118
A+ N R+GPG Y++V +G+ V++ W ++ F+GT GW L+ +
Sbjct: 59 AATDLNMRVGPGPNYSIVDVIPAEGM-VDLNGCVPGGGWCEVT-FEGTTGWAYSPYLTVE 116
Query: 119 RSAIVSPWN 127
+ + N
Sbjct: 117 ETPVAEMQN 125
Score = 41.5 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P IV + ++ + C G WC T GW +
Sbjct: 58 SAATDLNMRVGPGPNYSIVDVIPAEGMVDLNGCVPGGGWCEVTFEGTTGWAYSPYL 113
>gi|15599349|ref|NP_252843.1| hypothetical protein PA4154 [Pseudomonas aeruginosa PAO1]
gi|107103671|ref|ZP_01367589.1| hypothetical protein PaerPA_01004741 [Pseudomonas aeruginosa PACS2]
gi|116052190|ref|YP_788966.1| SH3 domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889517|ref|YP_002438381.1| putative SH3 domain protein [Pseudomonas aeruginosa LESB58]
gi|254237038|ref|ZP_04930361.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242838|ref|ZP_04936160.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|9950361|gb|AAG07541.1|AE004832_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587411|gb|ABJ13426.1| putative SH3 domain protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168969|gb|EAZ54480.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196216|gb|EAZ60279.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769740|emb|CAW25500.1| putative SH3 domain protein [Pseudomonas aeruginosa LESB58]
Length = 222
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 12 LDLRKYMPKILQNS--LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRI 69
+ L + +P L + + L A + +E R+V+ + R
Sbjct: 1 MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNA---RWVS-DSLTTFVRS 56
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
GP Y +V T LT G VE++ N+ Q+R +G+ WI L
Sbjct: 57 GPTDGYRIVGT-LTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|317182499|dbj|BAJ60283.1| hypothetical protein HPF57_1209 [Helicobacter pylori F57]
Length = 200
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 129 STSTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 185
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 186 ETKGYVFLKLLKK 198
>gi|317177992|dbj|BAJ55781.1| hypothetical protein HPF16_1184 [Helicobacter pylori F16]
Length = 196
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL + + N R P ++ + L K V+V++ +W +I +
Sbjct: 125 STSTIGKKPLEYKAAV--NSVNVRAFPSTKGKILGS-LAKNKSVKVLEIQNDWAKIEFSN 181
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 182 ETKGYVFLKLLKK 194
>gi|288925760|ref|ZP_06419691.1| aerotolerance-related exported protein [Prevotella buccae D17]
gi|288337415|gb|EFC75770.1| aerotolerance-related exported protein [Prevotella buccae D17]
Length = 262
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKP----LPRFVTIKAS 63
++Y R +M K L + L F + + A KE+ + +P V K
Sbjct: 157 LVYLFSPRVWMRK-LSFFMGLALFFLFIFSNLFAYQQYKELTCRTGAIVIVPSAVVKKTP 215
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+ +G V + E +NWR IR DG GWI S +
Sbjct: 216 ---------TDNGTDQFVIHEGTKVNITDEGMKNWRGIRLADGREGWIPASQI 259
>gi|156973181|ref|YP_001444088.1| hypothetical protein VIBHAR_00861 [Vibrio harveyi ATCC BAA-1116]
gi|156524775|gb|ABU69861.1| hypothetical protein VIBHAR_00861 [Vibrio harveyi ATCC BAA-1116]
Length = 203
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V++++ + + QIRD G GW+ ++ + S +
Sbjct: 33 MHSGPNNTYRIMGS-VNAGSKVQLLQTNKDTGYTQIRDARGRTGWVQSKFVTNQESMAIR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDI-QSIIVAKVE 153
K N + D ++ +V +E
Sbjct: 92 LPRVEKELKEVKEQLANARQNSDTEKAGLVTSLE 125
>gi|29378401|gb|AAO83902.1| invasion associated protein p60 [Listeria ivanovii]
Length = 523
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVTATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKISYGEGKTGYVNGKYLGT 140
Query: 118 KRSAIVSPWNRKT 130
++ +P ++
Sbjct: 141 TVTSAPAPEVKEE 153
>gi|15895986|ref|NP_349335.1| SH3 domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|15025764|gb|AAK80675.1|AE007770_8 Secreted protein containing SH3 domain homolog [Clostridium
acetobutylicum ATCC 824]
gi|325510139|gb|ADZ21775.1| Secreted protein [Clostridium acetobutylicum EA 2018]
Length = 303
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 56 RFVTIK---------ASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFD 104
R+V IK AS N R GP Y ++ T +++ EV W +I+ +
Sbjct: 230 RYVNIKEVAYVQVINASSLNIRTGPSTSYPIIGT-ISQNQIAEVTGYSSDGTWYKIK-IN 287
Query: 105 GTIGWINKSLLS 116
G G+ + + L+
Sbjct: 288 GIEGYASSTYLT 299
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGWI 179
I + N +N+ P I+ + + + G W EG+
Sbjct: 234 IKEVAYVQVINASSLNIRTGPSTSYPIIGTISQNQIAEVTGYSSDGTWYKIKINGIEGYA 293
Query: 180 KKQKI 184
+
Sbjct: 294 SSTYL 298
>gi|257126359|ref|YP_003164473.1| hypothetical protein Lebu_1610 [Leptotrichia buccalis C-1013-b]
gi|257050298|gb|ACV39482.1| hypothetical protein Lebu_1610 [Leptotrichia buccalis C-1013-b]
Length = 254
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-----GWINKSLL 115
K N R GP Y V+ V + +++ W+ I F+G G+++KS L
Sbjct: 192 KEGYTNIRKGPSKQYDVIGKVPNNYYAV-ITQDFGEWKYIVYFEGGSDKVGYGFVHKSQL 250
>gi|332638293|ref|ZP_08417156.1| N-acetylmuramoyl-L-alanine amidase [Weissella cibaria KACC 11862]
Length = 296
Score = 41.9 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++L + ++ ++P LAI + + +++++ +T++
Sbjct: 5 GRLLLAWLVKFWIP----------LAITVGMLGVAVAVTTVMLYKQQ-----ITVQIPNI 49
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R G+ T + L +G ++++ + + W ++R D + GW+ LL
Sbjct: 50 TIREKKGVAGTPISV-LKQGEHLQILAKDDGWYEVRREDESTGWVAGWLL 98
>gi|193214758|ref|YP_001995957.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Chloroherpeton thalassium ATCC 35110]
gi|193088235|gb|ACF13510.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Chloroherpeton thalassium ATCC 35110]
Length = 288
Score = 41.9 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P L KG + ++ E + W +++ GW++ + K
Sbjct: 229 VSADLLNIRYQPNERSATAAAPLPKGTLINILDEKDGWYKVQVQ--AEGWVSSKWVEAKL 286
Query: 120 S 120
S
Sbjct: 287 S 287
>gi|118592055|ref|ZP_01549449.1| hypothetical protein SIAM614_25302 [Stappia aggregata IAM 12614]
gi|118435351|gb|EAV41998.1| hypothetical protein SIAM614_25302 [Stappia aggregata IAM 12614]
Length = 189
Score = 41.9 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P ++A V G +TI C+ + WC + +GW+ + + Y
Sbjct: 30 TTANLNMRAGPGTNYPVIATVPRGGGVTIFGCTADFGWCDAAFTNVKGWVSGKYL--SYG 87
Query: 190 GEVF 193
GE
Sbjct: 88 GEGI 91
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 19/100 (19%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L + AI P A S + L N R GPG Y V+ T
Sbjct: 1 MLIRFSLALAAIVMMALPAGAQSRPAIAYTTANL-----------NMRAGPGTNYPVIAT 49
Query: 81 YLTKGLPVEVVKEYEN--WRQIRD--FDGTIGWINKSLLS 116
+ +G V + + W D F GW++ LS
Sbjct: 50 -VPRGGGVTIFGCTADFGW---CDAAFTNVKGWVSGKYLS 85
>gi|152983674|ref|YP_001346319.1| hypothetical protein PSPA7_0933 [Pseudomonas aeruginosa PA7]
gi|150958832|gb|ABR80857.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 222
Score = 41.9 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ + R GP Y +V T LT G VE++ N+ Q+R +G+ WI L
Sbjct: 44 RWVS-DSLTTFVRSGPTDGYRIVGT-LTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|126700384|ref|YP_001089281.1| putative cell-wall hydrolase [Clostridium difficile 630]
gi|115251821|emb|CAJ69656.1| putative cell-wall hydrolase [Clostridium difficile]
Length = 235
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
IL+ + L A++ P+ V + N R G VV
Sbjct: 10 ILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASANDAVVGK 68
Query: 81 YLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ G VEV++ + W +I+ D GW+N L+
Sbjct: 69 -INTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDYLT 104
>gi|86134843|ref|ZP_01053425.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
gi|85821706|gb|EAQ42853.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
Length = 252
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+F IL+ L P + IF++ Y L ++ + K + +
Sbjct: 135 IFAFLGSILFLLFYFSNKPGTKRFFFIFSMFSYLLLIITFVITINQHSLAGKS--KIAIV 192
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
A P + + T L +G V V+ +NW++I+ DG IGWI
Sbjct: 193 FAEETEVMNAPTLNSEELFT-LHEGTKVTVLDRVDNWKKIKLADGKIGWI 241
>gi|291528602|emb|CBK94188.1| Bacterial SH3 domain [Eubacterium rectale M104/1]
Length = 181
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D D IG I + + + +N+ +KPD + IV + V L
Sbjct: 62 DSDTEIGAIYLPQQTTEGT-----EKTYVTTTSSVNMREKPDKNANIVTVIGQNVKLEFV 116
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 117 SEDNGWTQVIFQGQTGYVSSDYV 139
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+VT +S N R P +V + + + +E V E W Q+ F G G+++ +
Sbjct: 84 YVTTTSS-VNMREKPDKNANIVTV-IGQNVKLEFVSEDNGWTQVI-FQGQTGYVSSDYV 139
>gi|291519306|emb|CBK74527.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Butyrivibrio fibrisolvens 16/4]
Length = 354
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
E++ +W I+ + G++ L + A+ T + + ++ +
Sbjct: 112 EILDTEGDWSHIKSGE-VEGYVLTEYLITGDAAWDKAVELAEYVATAKTGGLRVREQGNT 170
Query: 145 QSIIVAKVEPGV-LLTIRECSGE-WCFGYNLDTEGWI 179
S I+ ++ G + + G+ W EG++
Sbjct: 171 DSEIIYQLAEGEEIAILDNTQGDEWIKVDVDGDEGYV 207
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 22/55 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ + + +V K I + G+W + + EG++ + +
Sbjct: 83 NVSEGNLNIRESASTEGKLVGKFPALAACEILDTEGDWSHIKSGEVEGYVLTEYL 137
>gi|323137382|ref|ZP_08072460.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322397369|gb|EFX99892.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 228
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGWIK 180
+ +++ K P + +V + G +L C WC D GW+
Sbjct: 158 TGVGHGDELSMRKAPSPKGALVMRFANGAVLKNLGCKNTGGQRWCRVERPDDPSMRGWVN 217
Query: 181 KQKI 184
+ +
Sbjct: 218 GRYL 221
>gi|228939387|ref|ZP_04101977.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972266|ref|ZP_04132879.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978880|ref|ZP_04139247.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis Bt407]
gi|228780837|gb|EEM29048.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis Bt407]
gi|228787450|gb|EEM35416.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820282|gb|EEM66317.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326939958|gb|AEA15854.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|229079423|ref|ZP_04211964.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock4-2]
gi|228703880|gb|EEL56325.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock4-2]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|229109695|ref|ZP_04239281.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-15]
gi|228673736|gb|EEL28994.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-15]
Length = 323
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 201 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 255
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 256 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 288
>gi|229163818|ref|ZP_04291761.1| S-layer y domain protein [Bacillus cereus R309803]
gi|228619638|gb|EEK76521.1| S-layer y domain protein [Bacillus cereus R309803]
Length = 888
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P ++ Y + V VV+E W +IR + G + L + K
Sbjct: 592 PARSANILGYYGPQA--VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAK 635
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y P S + K P + E G W + W+ + +
Sbjct: 636 YLSKVFFAYDSPSFVSRVSGKYAPQTVEVYGERDGGWIQIQTSNGLKWVNEGNV 689
>gi|229178622|ref|ZP_04305986.1| Cell wall hydrolase/autolysin [Bacillus cereus 172560W]
gi|228604780|gb|EEK62237.1| Cell wall hydrolase/autolysin [Bacillus cereus 172560W]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|229190338|ref|ZP_04317339.1| Cell wall hydrolase/autolysin [Bacillus cereus ATCC 10876]
gi|228593122|gb|EEK50940.1| Cell wall hydrolase/autolysin [Bacillus cereus ATCC 10876]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|206971575|ref|ZP_03232525.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus AH1134]
gi|206733560|gb|EDZ50732.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus AH1134]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|218233949|ref|YP_002366953.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus B4264]
gi|228958522|ref|ZP_04120242.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229043998|ref|ZP_04191688.1| Cell wall hydrolase/autolysin [Bacillus cereus AH676]
gi|218161906|gb|ACK61898.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus B4264]
gi|228725343|gb|EEL76610.1| Cell wall hydrolase/autolysin [Bacillus cereus AH676]
gi|228801149|gb|EEM48046.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 328
Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAI 122
N R GP +V+ L V +E W + G W+ S ++ +++
Sbjct: 206 VNLRNGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKTSN 260
Query: 123 V--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
SP + +NL P S ++ ++
Sbjct: 261 SDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLN 293
>gi|218677927|ref|ZP_03525824.1| SH3 type 3 domain protein [Rhizobium etli CIAT 894]
Length = 220
Score = 41.5 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+N+ P + VA + G + IR C WC GW+ Q +
Sbjct: 32 VNMRAGPSTRYPAVAIIPAGSSVEIRGCLSEVNWCDVEFYGGRGWVSGQYV 82
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 18/97 (18%)
Query: 22 LQNSLIFTLAIYFY-LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++N + AI LAP +A + E N R GP Y V
Sbjct: 1 MKNLFVKIAAIGMLVLAPAIAQAAEGYSTAN-------------VNMRAGPSTRYPAV-A 46
Query: 81 YLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLL 115
+ G VE+ NW + + G GW++ +
Sbjct: 47 IIPAGSSVEIRGCLSEVNWCDVEFYGG-RGWVSGQYV 82
>gi|170766053|ref|ZP_02900864.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170125199|gb|EDS94130.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 206
Score = 41.5 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEEK-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N + Q++D G WI LS + S + + +
Sbjct: 55 EVTLLQTDANTNYAQVKDSSGRTVWIPLKQLSTEPSLRTRVPDLENQVKTLTD 107
>gi|86142392|ref|ZP_01060902.1| N-acetylmuramoyl-L-alanine amidase [Leeuwenhoekiella blandensis
MED217]
gi|85831144|gb|EAQ49601.1| N-acetylmuramoyl-L-alanine amidase [Leeuwenhoekiella blandensis
MED217]
Length = 253
Score = 41.5 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ N R GP Y VV + V + + NW +I+ D G+++ ++
Sbjct: 24 VNTELLNVRSGPSTDYEVVGQ-VKLNQKVLEISKSGNWSKIQ-VDDLQGYVSAKYITA 79
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 21/57 (36%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+N+ P +V +V+ + SG W D +G++ + I +
Sbjct: 27 ELLNVRSGPSTDYEVVGQVKLNQKVLEISKSGNWSKIQVDDLQGYVSAKYITAVDAN 83
>gi|325567549|ref|ZP_08144216.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
gi|325158982|gb|EGC71128.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
Length = 700
Score = 41.5 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 34/151 (22%)
Query: 60 IKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEY--------ENWRQIRDFDGTIGWI 110
+K + A N R +VV + L+KG +NW I GW+
Sbjct: 416 MKTTEAMNIRSSASTSGSVVGS-LSKGTTFTATSMKTGTSVNGNKNWYYIS----GKGWV 470
Query: 111 NKSLLSGKRSAIVSPWNRKTN---------NPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ + L+ + S ++ N +N+ S +V + GV +T+
Sbjct: 471 SGAYLTEVTNNNSSEAEKEDNGSSINQQMKTTAALNVRSDASTSSRVVTTLGQGVAVTVT 530
Query: 162 ECSGE--------WCFGYNLDTEGWIKKQKI 184
W + +GW+ +
Sbjct: 531 AKKNGTSVEGNKTWYYVSG---KGWVSGAYL 558
>gi|329767281|ref|ZP_08258807.1| hypothetical protein HMPREF0428_00504 [Gemella haemolysans M341]
gi|328836203|gb|EGF85873.1| hypothetical protein HMPREF0428_00504 [Gemella haemolysans M341]
Length = 481
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ R GP Y V+ +T G VE++ + + W +I+ D +GW+
Sbjct: 48 SKEIELRTGPDDTYPVL-KKVTAGDNVEMLSKSDTWYEIKTNDSFVGWVPGW 98
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIK 180
I L PD ++ KV G + + S W D GW+
Sbjct: 51 IELRTGPDDTYPVLKKVTAGDNVEMLSKSDTWYEIKTNDSFVGWVP 96
>gi|254976362|ref|ZP_05272834.1| putative cell-wall hydrolase [Clostridium difficile QCD-66c26]
gi|255093747|ref|ZP_05323225.1| putative cell-wall hydrolase [Clostridium difficile CIP 107932]
gi|255315499|ref|ZP_05357082.1| putative cell-wall hydrolase [Clostridium difficile QCD-76w55]
gi|255518162|ref|ZP_05385838.1| putative cell-wall hydrolase [Clostridium difficile QCD-97b34]
gi|255651278|ref|ZP_05398180.1| putative cell-wall hydrolase [Clostridium difficile QCD-37x79]
gi|260684342|ref|YP_003215627.1| putative cell-wall hydrolase [Clostridium difficile CD196]
gi|260688001|ref|YP_003219135.1| putative cell-wall hydrolase [Clostridium difficile R20291]
gi|260210505|emb|CBA65001.1| putative cell-wall hydrolase [Clostridium difficile CD196]
gi|260214018|emb|CBE06151.1| putative cell-wall hydrolase [Clostridium difficile R20291]
Length = 235
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
IL+ + L A++ P+ V + N R G VV
Sbjct: 10 ILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASANDAVVGK 68
Query: 81 YLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ G VEV++ + W +I+ D GW+N L+
Sbjct: 69 -INTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDYLT 104
>gi|225416610|ref|ZP_03761799.1| hypothetical protein CLOSTASPAR_05834 [Clostridium asparagiforme
DSM 15981]
gi|225041856|gb|EEG52102.1| hypothetical protein CLOSTASPAR_05834 [Clostridium asparagiforme
DSM 15981]
Length = 542
Score = 41.5 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 14/134 (10%)
Query: 60 IKASRANSRIGPGIM-YTVVCTYLTKGLPVEVVKEYENWRQIRDFDG----TIGWINKSL 114
+ N R P + V+ L V+ + + W QI +G + +L
Sbjct: 180 VTTDNLNIRKEPALDPNNVIGQAL-LNERYVVLGQQDGWIQIE--EGYISADYAEVKYAL 236
Query: 115 LSGKRSAIVSPWNRKTNN------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
G++ + + + +N Y+N+ +P I+ K+ I E W
Sbjct: 237 NEGRKMDLKAMAINQYDNLVISKVNNYLNVRAEPKSDGKIIGKMTSKAAGEILESLDGWY 296
Query: 169 FGYNLDTEGWIKKQ 182
+ G+I
Sbjct: 297 KIKSGPITGYITAD 310
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 12/127 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-- 113
++ + N R P ++ T G E+++ + W +I+ G+I
Sbjct: 257 ISKVNNYLNVRAEPKSDGKIIGKMTSKAAG---EILESLDGWYKIK-SGPITGYITADPQ 312
Query: 114 -LLSGKRS---AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+G+ + A+ + + N +N+ +P+ + I ++ + W
Sbjct: 313 YTATGQEAKDIAMQTATLKAVINTDVLNVRTEPNTDAKIWTQIVKDERYPVLAQLDGWVQ 372
Query: 170 GYNLDTE 176
+
Sbjct: 373 IELDSVD 379
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P + I+ K+ I E GEW + +G+I Q +
Sbjct: 111 YLNIRETPSLDGKIIGKLSGDAGCEILETDGEWSHITSGGVDGYINNQYL 160
>gi|254737038|ref|ZP_05194743.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Western North America USA6153]
gi|254744365|ref|ZP_05202045.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Kruger B]
gi|254755667|ref|ZP_05207700.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Vollum]
gi|254759600|ref|ZP_05211625.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Australia 94]
Length = 129
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 28 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 85
Query: 119 RSAIVSPWNRKTNNPIYINL 138
++ + N + ++
Sbjct: 86 GTSNSNVSTTGGKNKVTADV 105
>gi|192359456|ref|YP_001983725.1| hypothetical protein CJA_3270 [Cellvibrio japonicus Ueda107]
gi|190685621|gb|ACE83299.1| hypothetical protein CJA_3270 [Cellvibrio japonicus Ueda107]
Length = 261
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
T N ++N+Y P I VE ++T+ + +W +GWIK+ +
Sbjct: 44 TVNDAFLNVYAGPGSGYPIFHVVERDEVITLLKSRTDWIKIETRRGLQGWIKRSDM 99
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
P VT+ + N GPG Y + + + + ++K +W +I G GWI +S
Sbjct: 40 PLQVTVNDAFLNVYAGPGSGYPI-FHVVERDEVITLLKSRTDWIKIETRRGLQGWIKRS 97
>gi|168183065|ref|ZP_02617729.1| glycosyl hydrolase, family 18 [Clostridium botulinum Bf]
gi|237794496|ref|YP_002862048.1| glycosyl hydrolase, family 18 [Clostridium botulinum Ba4 str. 657]
gi|182673768|gb|EDT85729.1| glycosyl hydrolase, family 18 [Clostridium botulinum Bf]
gi|229263368|gb|ACQ54401.1| glycosyl hydrolase, family 18 [Clostridium botulinum Ba4 str. 657]
Length = 504
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I V+ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRSAPNINSKVLYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|49188069|ref|YP_031322.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Sterne]
gi|49181996|gb|AAT57372.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Sterne]
Length = 131
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ AS + R G + ++ G + V+ E W +I + +G G+++ +S
Sbjct: 30 TVNASVLHVRAGSSTSHDIISRVYN-GQSLNVIGEENGWYKI-NINGKTGFVSGEFVSKN 87
Query: 119 RSAIVSPWNRKTNNPIYINL 138
++ + N + ++
Sbjct: 88 GTSNSNVSTTGGKNKVTADV 107
>gi|315608290|ref|ZP_07883280.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315250071|gb|EFU30070.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 262
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKP----LPRFVTIKAS 63
++Y R +M K L + L F + + A KE+ + +P V K
Sbjct: 157 LVYLFSPRVWMRK-LSFFMGLALFFLFIFSNLFAYQQYKELTCRTGAIVIVPSAVVKKTP 215
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+ +G V + E ++WR IR DG GWI S +
Sbjct: 216 ---------TDNGTDQFVIHEGTKVNITDEGMKDWRGIRLADGREGWIPASQI 259
>gi|221141099|ref|ZP_03565592.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|302751460|gb|ADL65637.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus str. JKD6008]
Length = 291
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
K A R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 48 KTENAELRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 100
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITKTENAELRTGPNAAYPV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
>gi|186475797|ref|YP_001857267.1| SH3 type 3 domain-containing protein [Burkholderia phymatum STM815]
gi|184192256|gb|ACC70221.1| SH3 type 3 domain protein [Burkholderia phymatum STM815]
Length = 259
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ + + LY P IVA++ G +T+ C WC GW+
Sbjct: 21 ASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGCVSGYTWCDVAIPQARGWVYG 80
Query: 182 QKIWGIYP 189
+ YP
Sbjct: 81 GDL--AYP 86
>gi|170756162|ref|YP_001782647.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
B1 str. Okra]
gi|169121374|gb|ACA45210.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
B1 str. Okra]
Length = 256
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ GWIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 STGWIN---LDGKTGTICTPSG--------VNVREGKSTTSRILGTLPNGAKVQLYHKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSKYI 254
>gi|288800162|ref|ZP_06405621.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288333410|gb|EFC71889.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 250
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+Y+ + + FT+A+ + IL+ + K + +S+A P
Sbjct: 148 RYVSSLKFQKISFTIAMLSVVLFILSNLFAYQQKRKLSEHNEAIVMSSKAEVFKTPNNSA 207
Query: 76 TVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
L +G V++V +NW ++ DG GWI SLL
Sbjct: 208 KTE-IILHEGTKVKIVDSDIKNWFEVSLPDGRSGWIKASLL 247
>gi|254694186|ref|ZP_05156014.1| Bacterial SH3-like region [Brucella abortus bv. 3 str. Tulya]
Length = 251
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
+ + T +NL P Q + + GV + + C+ WC GW
Sbjct: 16 VSTNAYASSTIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 179 IKKQKI 184
+ I
Sbjct: 76 AASRYI 81
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
TI S N R GPG Y + + G+ + V W Q+ + G GW ++
Sbjct: 25 TIVTSTVNLRTGPGTQYGTIGA-IPNGVGIMVAGCTRGYGWCQVS-YGGMTGWAASRYIA 82
>gi|168184175|ref|ZP_02618839.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
gi|182672750|gb|EDT84711.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
Length = 257
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
GW+N L GK I N P +N+ + S I+ + G + +
Sbjct: 187 NNSGWVN---LDGKSGTI--------NTPSGVNVREAKSTSSKILGALPNGSKVQLYRKE 235
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 236 GDWIHIYYPPHGGYVYAKYI 255
>gi|167636610|ref|ZP_02394903.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0442]
gi|254744700|ref|ZP_05202378.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Kruger B]
gi|167527986|gb|EDR90795.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0442]
Length = 310
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I+ + N R G G Y V+ L KG EV + W + G WI S +
Sbjct: 181 IEGNGINLRKGLGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGNQWIYNDSSYIRY 235
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + N + + K P IV V G W
Sbjct: 236 TGESTPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNV 295
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 296 ---GGDQWVSGEYV 306
>gi|114776884|ref|ZP_01451927.1| hypothetical protein SPV1_11731 [Mariprofundus ferrooxydans PV-1]
gi|114552970|gb|EAU55401.1| hypothetical protein SPV1_11731 [Mariprofundus ferrooxydans PV-1]
Length = 209
Score = 41.5 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 13/97 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ + I AL+ + I ++ LP R G + ++ L G
Sbjct: 2 RLIFVIIGLLACATTALADTRYIVDQATLP-----------MRSGQSTSFKIIGM-LPSG 49
Query: 86 LPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSA 121
+ V+V+++ E + +IR G GWI L +A
Sbjct: 50 MAVDVLEQAESGYSRIRTPTGKEGWILSRYLMSTPAA 86
>gi|29378403|gb|AAO83903.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 41.5 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA ++T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQQETTQAAPAQQTKTEVKQATPAATTEKDAV 184
>gi|88801585|ref|ZP_01117113.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
gi|88782243|gb|EAR13420.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
Length = 252
Score = 41.5 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
A + R P + + T L +G V V+ +NW++I+ DG GWI
Sbjct: 194 AEKTAIRDAPTLNAEAIFT-LHEGTKVVVLDAVDNWKKIQLADGKQGWI 241
>gi|257868908|ref|ZP_05648561.1| autolysin [Enterococcus gallinarum EG2]
gi|257803072|gb|EEV31894.1| autolysin [Enterococcus gallinarum EG2]
Length = 613
Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 34/148 (22%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--------WRQIRDFDGTIGWINKSLLSG 117
N R +VV + L + V + + W ++ GW++ + ++
Sbjct: 427 NIRSDASTSASVVGS-LANNTTFKAVAQKQGTSVNGNSTWYRVE----GKGWVSAAYVTE 481
Query: 118 KRSAIVSPW-----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------ 166
S S N++ +N+ P + +V +
Sbjct: 482 AGSNNNSNNSEQTINKQFKTTAVLNIRSNPSTSASVVGSLANNTTFKAVAQKQGTSVNGN 541
Query: 167 --WCFGYNLDTEGWIKKQKIWGIYPGEV 192
W +GW+ G Y EV
Sbjct: 542 STWYRVEG---KGWVS-----GAYVKEV 561
>gi|17986785|ref|NP_539419.1| hypothetical protein BMEI0502 [Brucella melitensis bv. 1 str. 16M]
gi|256045130|ref|ZP_05448031.1| hypothetical protein Bmelb1R_11619 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263531|ref|ZP_05466063.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|260565268|ref|ZP_05835752.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|17982415|gb|AAL51683.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
str. 16M]
gi|260151336|gb|EEW86430.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|263093559|gb|EEZ17584.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326409528|gb|ADZ66593.1| Bacterial SH3-like region [Brucella melitensis M28]
gi|326539236|gb|ADZ87451.1| hypothetical Membrane Spanning Protein [Brucella melitensis M5-90]
Length = 251
Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K+ + IFTLA+ + + I S N R GPG Y +
Sbjct: 2 KLSARASIFTLALLVSTNAYASSA----------------IVTSTVNLRTGPGTQYGTIG 45
Query: 80 TYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
+ G+ + V W Q+ + G GW ++
Sbjct: 46 A-IPNGVGIMVAGCTRGYGWCQVS-YGGMTGWAASRYIA 82
>gi|257875974|ref|ZP_05655627.1| predicted protein [Enterococcus casseliflavus EC20]
gi|257810140|gb|EEV38960.1| predicted protein [Enterococcus casseliflavus EC20]
Length = 700
Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 24/106 (22%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---------NPIYINLYKKPDIQS 146
NW + GW++ + L+ + S ++ N +N+ S
Sbjct: 460 NWYYVS----GKGWVSGAYLTEVTNNNASEAEKEDNSSSINQKMKTTAALNVRSDASTSS 515
Query: 147 IIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWIKKQKI 184
+V + GV +T+ W + +GW+ +
Sbjct: 516 RVVTTLGQGVTVTVTAKKNGTSVEGNKTWYYVSG---KGWVSGAYL 558
>gi|30263648|ref|NP_846025.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase family
protein 2 [Bacillus anthracis str. Ames]
gi|47529054|ref|YP_020403.1| prophage lambdaba01, n-acetylmuramoyl-l-alanine amidase family
protein 2 [Bacillus anthracis str. 'Ames Ancestor']
gi|49186493|ref|YP_029745.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase family
protein 2 [Bacillus anthracis str. Sterne]
gi|165873079|ref|ZP_02217698.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0488]
gi|177655449|ref|ZP_02936924.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0174]
gi|227813464|ref|YP_002813473.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CDC 684]
gi|229602741|ref|YP_002867889.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0248]
gi|254682264|ref|ZP_05146125.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CNEVA-9066]
gi|254733668|ref|ZP_05191384.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Western North America USA6153]
gi|254751277|ref|ZP_05203314.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Vollum]
gi|30258283|gb|AAP27511.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Ames]
gi|47504202|gb|AAT32878.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. 'Ames Ancestor']
gi|49180420|gb|AAT55796.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Sterne]
gi|164711180|gb|EDR16738.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0488]
gi|172080126|gb|EDT65221.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0174]
gi|227003233|gb|ACP12976.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CDC 684]
gi|229267149|gb|ACQ48786.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0248]
Length = 310
Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 17/134 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I+ + N R G G Y V+ L KG EV + W + G WI S +
Sbjct: 181 IEGNGINLRKGLGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGNQWIYNDSSYIRY 235
Query: 118 KRSAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + N + + K P IV V G W
Sbjct: 236 TGESTPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNV 295
Query: 171 YNLDTEGWIKKQKI 184
+ W+ + +
Sbjct: 296 ---GGDQWVSGEYV 306
>gi|254697839|ref|ZP_05159667.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
Length = 251
Score = 41.5 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|331082413|ref|ZP_08331539.1| hypothetical protein HMPREF0992_00463 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400899|gb|EGG80500.1| hypothetical protein HMPREF0992_00463 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 746
Score = 41.5 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYN 172
L + V +N+ + + +S I+ +E L + + +W + +
Sbjct: 392 YLRATVNQTVVDKEYALTTASLLNIREDKNTESRIIGTLEENSLCYVLADAEEDWVYIES 451
Query: 173 LDTEGWIKKQKI 184
D G++ K+ +
Sbjct: 452 GDVRGFVAKEYL 463
>gi|163802700|ref|ZP_02196591.1| hypothetical protein 1103602000604_AND4_18656 [Vibrio sp. AND4]
gi|159173588|gb|EDP58408.1| hypothetical protein AND4_18656 [Vibrio sp. AND4]
Length = 203
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V++++ + + +IRD G GW+ ++ + S +
Sbjct: 33 MHSGPNNTYRIMGS-VNAGSKVQLLQTNKDTGYTKIRDARGRTGWVQNKFVTNQESMAIR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDI-QSIIVAKVE 153
K N + D ++ +V +E
Sbjct: 92 LPRIEKELKEVKEQLANARQNSDTEKAGLVTSLE 125
>gi|288929808|ref|ZP_06423651.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 317
str. F0108]
gi|288328909|gb|EFC67497.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 317
str. F0108]
Length = 416
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ Y NL ++ S ++ +V +LT+ G+W G+I K +I
Sbjct: 351 DDPDGYANLRERASSTSKVIKRVATNEMLTVLNNDGQWWKVQTKDGKTGYIHKSRI 406
>gi|260913889|ref|ZP_05920363.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631976|gb|EEX50153.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 203
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y + + G V V+ + E + IRD WI S L+ S+
Sbjct: 36 LRKGAGDQYKIAGA-IKAGEQVTVLDQKERYTLIRDSKNRDAWILTSELTSTPSS 89
>gi|225572680|ref|ZP_03781435.1| hypothetical protein RUMHYD_00869 [Blautia hydrogenotrophica DSM
10507]
gi|225039980|gb|EEG50226.1| hypothetical protein RUMHYD_00869 [Blautia hydrogenotrophica DSM
10507]
Length = 308
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 20/61 (32%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
S N+ + S ++ VE G +T G+W G+I +
Sbjct: 247 SADEETMTAVEDANIRAEASSDSEVIGGVEAGGKVTRLSTEGDWVQIEYEGQTGYIYGEL 306
Query: 184 I 184
+
Sbjct: 307 L 307
>gi|62290399|ref|YP_222192.1| hypothetical protein BruAb1_1503 [Brucella abortus bv. 1 str.
9-941]
gi|82700321|ref|YP_414895.1| hypothetical protein BAB1_1529 [Brucella melitensis biovar Abortus
2308]
gi|189024625|ref|YP_001935393.1| SH3 domain protein [Brucella abortus S19]
gi|254689696|ref|ZP_05152950.1| Bacterial SH3-like region [Brucella abortus bv. 6 str. 870]
gi|254730729|ref|ZP_05189307.1| Bacterial SH3-like region [Brucella abortus bv. 4 str. 292]
gi|256257947|ref|ZP_05463483.1| Bacterial SH3-like region [Brucella abortus bv. 9 str. C68]
gi|260546936|ref|ZP_05822675.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|297248784|ref|ZP_06932502.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|62196531|gb|AAX74831.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616422|emb|CAJ11485.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|189020197|gb|ACD72919.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260095986|gb|EEW79863.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|297175953|gb|EFH35300.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 251
Score = 41.5 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K+ + IFTLA+ + + I S N R GPG Y +
Sbjct: 2 KLSARASIFTLALLVSTNAYASSA----------------IVTSTVNLRTGPGTQYGTIG 45
Query: 80 TYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
+ G+ + V W Q+ + G GW ++
Sbjct: 46 A-IPNGVGIMVAGCTRGYGWCQVS-YGGMTGWAASRYIA 82
>gi|241890110|ref|ZP_04777408.1| peptidase, C39 family [Gemella haemolysans ATCC 10379]
gi|241863732|gb|EER68116.1| peptidase, C39 family [Gemella haemolysans ATCC 10379]
Length = 481
Score = 41.5 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
A R GP Y + +T G VE++ + + W +++ D +GWI + G
Sbjct: 48 AKEIEIRTGPDDSYPTL-KKVTAGDNVEMLSKSDTWYEVKTKDSFVGWIPGWSILGT 103
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-T 175
G++ + S I + PD + KV G + + S W D
Sbjct: 32 GEKMNLSSNSENNITIAKEIEIRTGPDDSYPTLKKVTAGDNVEMLSKSDTWYEVKTKDSF 91
Query: 176 EGWIK 180
GWI
Sbjct: 92 VGWIP 96
>gi|153930977|ref|YP_001385246.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 19397]
gi|152927021|gb|ABS32521.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 19397]
Length = 256
Score = 41.5 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ W+N L GK I N P +N+ + S ++ + G + +
Sbjct: 185 NNNNSWVN---LDGKTGTI--------NTPSGVNVRESKSTSSRVLGALANGAKVNLYRK 233
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G+I + I
Sbjct: 234 EGDWIHIYYPPHGGYIYSKYI 254
>gi|256114067|ref|ZP_05454837.1| hypothetical protein Bmelb3E_14817 [Brucella melitensis bv. 3 str.
Ether]
Length = 251
Score = 41.5 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K+ + IFTLA+ + + I S N R GPG Y +
Sbjct: 2 KLSARASIFTLALLVSTNAYASSA----------------IVTSTVNLRTGPGTQYGTIG 45
Query: 80 TYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
+ G+ + V W Q+ + G GW ++
Sbjct: 46 A-IPNGVGIMVAGCTRGYGWCQVS-YGGMTGWAASRYIA 82
>gi|226315303|ref|YP_002775199.1| hypothetical protein BBR47_57180 [Brevibacillus brevis NBRC 100599]
gi|226098253|dbj|BAH46695.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 587
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
A S E P T K GPG Y + G +V+ +
Sbjct: 511 TGSGEAPSPADSSTEATDQPSPATQKTD---VFAGPGEEYEKIGQVAADGS-FQVIADLN 566
Query: 96 NWRQIRDFDGTIGWI 110
W QI FDG GWI
Sbjct: 567 GWYQIV-FDGKEGWI 580
>gi|288550418|ref|ZP_05970345.2| arylsulfatase [Enterobacter cancerogenus ATCC 35316]
gi|288315127|gb|EFC54065.1| arylsulfatase [Enterobacter cancerogenus ATCC 35316]
Length = 230
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
+ L + + + EK R+V+ N R GPG Y +V T +
Sbjct: 25 MLKLRLIGLTLLAFSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-VNA 76
Query: 85 GLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V +++ N+ Q+RD G WI LS S + + +
Sbjct: 77 GEEVVLLQTNADTNYGQVRDSTGRTSWIPLKELSNVPSLRTRVPDLENQVKTLTD 131
>gi|168179410|ref|ZP_02614074.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
NCTC 2916]
gi|182669861|gb|EDT81837.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
NCTC 2916]
Length = 256
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ W+N L GK I N P +N+ + S I+ + G + +
Sbjct: 185 NNNNSWVN---LDGKTGTI--------NTPSGVNVREGKSTSSKILGTIPNGAKVQLYRK 233
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 234 EGDWIHIYYPQHGGYVYAKYI 254
>gi|75762202|ref|ZP_00742096.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490305|gb|EAO53627.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 202
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + C YL + V VV+E + W +I+ + G W ++ ++
Sbjct: 79 PSLSSPISCEYLPQ--TVNVVEEGKDGWVKIKTYFGDK-W------------LLIEQTKR 123
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
Y +P + S I + P + + E W + W+ K++
Sbjct: 124 VKIDRVFYTYNEPSLSSGISSGFSPQTVTVLEERPDGWMKIKTYFGDKWMLKEQ 177
>gi|269960202|ref|ZP_06174577.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835009|gb|EEZ89093.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 203
Score = 41.5 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V++++ + + QIRD G GW+ ++ + S +
Sbjct: 33 MHSGPNNTYRIMGS-VNAGSKVQLLQANKDTGYTQIRDSRGRTGWVQSKFVTNQESMAIR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDI-QSIIVAKVE 153
K N + D ++ +V +E
Sbjct: 92 MPRIEKELKEVKSQLANARQNSDTEKAGLVTSLE 125
>gi|283797584|ref|ZP_06346737.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
gi|291074693|gb|EFE12057.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
Length = 306
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP + E+ E P R+ T + N R P + + L G VE +++Y
Sbjct: 224 TIAPTEEATTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQ-LAPGTEVEYIEDY 280
Query: 95 EN-WRQIRDFDGTIGWINKSLL 115
++ W +I F+G G+++K L
Sbjct: 281 DDTWVKIT-FEGQEGYVSKEYL 301
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ +P + + ++ PG + I + W EG++ K+ +
Sbjct: 244 KRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEGQEGYVSKEYL 301
>gi|110636283|ref|YP_676491.1| SH3, type 3 [Mesorhizobium sp. BNC1]
gi|110287267|gb|ABG65326.1| SH3, type 3 [Chelativorans sp. BNC1]
Length = 214
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V + G + + C+ WC GW+ +
Sbjct: 33 VNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSASYL 83
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD--FDGTIGWINKSLL 115
N R GP Y V T L +G VEV WR D + G GW++ S L
Sbjct: 33 VNMRAGPSTQYPRVMT-LPQGAAVEVYGCTNGWRW-CDTSWRGYRGWVSASYL 83
>gi|49475894|ref|YP_033935.1| hypothetical protein BH11710 [Bartonella henselae str. Houston-1]
gi|49238702|emb|CAF27954.1| hypothetical [Bartonella henselae str. Houston-1]
Length = 106
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+A VS +N P IQ I + G L+ ++ C WC GW+
Sbjct: 16 TATVSGAADAFVTRN-LNFRTGPSIQCTIHGLIPAGKLVFVQNCKANWCQIRYNTQTGWV 74
Query: 180 KKQKI 184
+ +
Sbjct: 75 SSRYL 79
>gi|289433859|ref|YP_003463731.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|266726|sp|Q01838|P60_LISSE RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149669|gb|AAA25286.1| extracellular protein [Listeria seeligeri]
gi|289170103|emb|CBH26643.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 523
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA +T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQEETTQAAPAQQTKTEVKQATPAATTEKDAV 184
>gi|228934078|ref|ZP_04096919.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825592|gb|EEM71384.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 336
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 29/137 (21%)
Query: 57 FVTIKASRANSRIGPGIMYTVV-------------CTYLTKGLPVEVVKEYENWRQIRDF 103
++T A AN R P + V+ +Y W ++
Sbjct: 206 YLTTTAEVANIRKEPNLNSPVMRQAVKGQGHTYYAWSYDGSHF----------WYKV--A 253
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ W+ ++S + + INL K +++ K+ +
Sbjct: 254 ENN--WMRDDVVSINKDG--KSKGVVWVSGTNINLRKGASTGDVVINKLTKQSAYDVHYR 309
Query: 164 SGEWCFGYNLDTEGWIK 180
W + EGW+
Sbjct: 310 YENWIYVTGEGVEGWMY 326
>gi|228904075|ref|ZP_04068170.1| S-layer y domain protein [Bacillus thuringiensis IBL 4222]
gi|228855160|gb|EEM99724.1| S-layer y domain protein [Bacillus thuringiensis IBL 4222]
Length = 876
Score = 41.5 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + C YL + V VV+E + W +I+ + G W ++ ++
Sbjct: 350 PSLSSPISCEYLPQ--TVNVVEEGKDGWVKIKTYFGDK-W------------LLIEQTKR 394
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
Y +P + S I + P + + E W + W+ K++
Sbjct: 395 VKIDRVFYTYNEPSLSSGISSGFSPQTVTVLEERPDGWMKIKTYFGDKWMLKEQ 448
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 87 PVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
PV V++E W +I + G W+N + + Y P+
Sbjct: 589 PVGVIEERAGGWIKIHTWLGHK-WVN--------TVQNEAKHENIYFNKVFFAYDSPNFS 639
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S + K P + ++E G W + W+ K +
Sbjct: 640 SNVAGKFAPQTV-EVKEKRGAWVRIGTGLGDKWVNKDTL 677
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 19/119 (15%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP + V +L + +EV++E + W ++ + G +K V+ +
Sbjct: 462 GPSLSSGVSSYFLAQ--KLEVIEERADGWVKVNTYLG-----HKW---------VTKDMK 505
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK--IW 185
K +Y + S I ++ + + E W W+K + +W
Sbjct: 506 KVWMTKNFFIYNDASLSSGIASECGAQPVGVLEEREDGWIKIDTWLGHKWVKTTEKKVW 564
>gi|113461335|ref|YP_719404.1| hypothetical protein HS_1192 [Haemophilus somnus 129PT]
gi|112823378|gb|ABI25467.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 263
Score = 41.5 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + L L L+ ++ + + K+ L F R G G +
Sbjct: 55 LFSGFIMKKITSLLVSALLLGFSLSNAYAETKYVKENLTTF---------MRRGAGDQFK 105
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ T + G V V+ + + + IRD WI S L+ S+
Sbjct: 106 ISGT-IQAGESVTVLDKKDKYSLIRDKRNREAWILTSELTSTPSS 149
>gi|196041686|ref|ZP_03108977.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196027455|gb|EDX66071.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 336
Score = 41.5 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 29/137 (21%)
Query: 57 FVTIKASRANSRIGPGIMYTVV-------------CTYLTKGLPVEVVKEYENWRQIRDF 103
++T A AN R P + V+ +Y W ++
Sbjct: 206 YLTTTAEVANIRKEPNLNSPVMRQAVKGQGHTYYAWSYDGSHF----------WYKV--A 253
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ W+ ++S + + INL K +++ K+ +
Sbjct: 254 ENN--WMRDDVVSINKDG--KSKGVVWVSGTNINLRKGASTGDVVINKLTKQSAYDVHYR 309
Query: 164 SGEWCFGYNLDTEGWIK 180
W + EGW+
Sbjct: 310 YENWIYVTGEGVEGWMY 326
>gi|308183361|ref|YP_003927488.1| hypothetical protein HPPC_06140 [Helicobacter pylori PeCan4]
gi|308065546|gb|ADO07438.1| hypothetical protein HPPC_06140 [Helicobacter pylori PeCan4]
Length = 192
Score = 41.5 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + L K V+V++ +W +I
Sbjct: 119 ALTTSTMGKKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LAKDKSVKVLEIQNDWAKIEF 175
Query: 103 FDGTIGWINKSLLSG 117
+ G++ LL
Sbjct: 176 SNEKKGYVFLKLLKK 190
>gi|33152440|ref|NP_873793.1| hypothetical protein HD1369 [Haemophilus ducreyi 35000HP]
gi|33148663|gb|AAP96182.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 199
Score = 41.5 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R G G Y + T + G + V+ + + IRD GW+ + +S S
Sbjct: 32 MRKGAGDQYKIAGT-IQAGEKITVLDRKDRFVLIRDSRNREGWVLNNEISQTAS 84
>gi|150395845|ref|YP_001326312.1| SH3 type 3 domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027360|gb|ABR59477.1| SH3 type 3 domain protein [Sinorhizobium medicae WSM419]
Length = 220
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 36/110 (32%), Gaps = 21/110 (19%)
Query: 22 LQNSLIFTLAIYFYL-APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++ + T+A+ L P +A + E N R GP Y V
Sbjct: 1 MKKVFLRTVAVCALLLMPAVASAAEGFATAN-------------VNMRSGPSTYYPAVTV 47
Query: 81 YLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSG---KRSAIVSP 125
+ G VE+ + W + + G GW+ + R V P
Sbjct: 48 -IPAGDSVEIHGCLSDRPWCDVSFYGG-RGWVAGRYVQAAFQSRRVYVEP 95
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C + WC GW+ + +
Sbjct: 32 VNMRSGPSTYYPAVTVIPAGDSVEIHGCLSDRPWCDVSFYGGRGWVAGRYV 82
>gi|317011450|gb|ADU85197.1| hypothetical protein HPSA_06145 [Helicobacter pylori SouthAfrica7]
Length = 194
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + LTK V+V++ ++W +I
Sbjct: 121 TPTTPTMGKKPLEYKVAV--SSVNVRSFPSTKGRIIGS-LTKDASVKVLEIQKDWAKIEF 177
Query: 103 FDGTIGWINKSLLSG 117
T G++ LL
Sbjct: 178 TKETKGYVFLKLLKK 192
>gi|313203636|ref|YP_004042293.1| hypothetical protein [Paludibacter propionicigenes WB4]
gi|312442952|gb|ADQ79308.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 250
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
L+ ++ K+ + L + F + ++ + ++ + + +
Sbjct: 147 LFIFGSTHFIRKLSFQVAVSLLLVCFATFIFSGIRKDQLVNHREAI-----VMVGVVTVK 201
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
P L +G V+V NW +I+ +G +GW+ ++
Sbjct: 202 SSPDKS-GTDLFQLHEGTKVKVKSTLGNWTEIKLGNGNVGWVEQA 245
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 9/76 (11%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I K L R AIV + + PD + ++ G + ++ G W
Sbjct: 180 IRKDQLVNHREAIVMVG--------VVTVKSSPDKSGTDLFQLHEGTKVKVKSTLGNWTE 231
Query: 170 GY-NLDTEGWIKKQKI 184
GW+++ I
Sbjct: 232 IKLGNGNVGWVEQANI 247
>gi|120554738|ref|YP_959089.1| hypothetical protein Maqu_1820 [Marinobacter aquaeolei VT8]
gi|120324587|gb|ABM18902.1| protein of unknown function DUF1058 [Marinobacter aquaeolei VT8]
Length = 263
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R GP Y V KG + +++ +W ++ D G GW++ + L+
Sbjct: 55 RTGPATGYPV-FHTSEKGEWLTILQRKTSWIKVMDSRGREGWVSVADLAQT 104
>gi|89095481|ref|ZP_01168390.1| hypothetical protein MED92_12154 [Oceanospirillum sp. MED92]
gi|89080258|gb|EAR59521.1| hypothetical protein MED92_12154 [Oceanospirillum sp. MED92]
Length = 152
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
++ I L++ P S + + ++I + G W +GW+K
Sbjct: 19 ASQDAFTVRQIALHESPRNSSPALLSLNKNSQVSILKRQGGWYQVQAQGQKGWLK 73
>gi|225010245|ref|ZP_03700717.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
gi|225005724|gb|EEG43674.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
Length = 304
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + + + LA + A EK + P F T K P +
Sbjct: 208 MAKRFFFTTSILMVLLSGLAYLNASLVEKASKKDNPAIVFETAK-----VLSEPNSN-GI 261
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
L +G V+V++ + NW +I+ DG IGW+ ++ +
Sbjct: 262 EAFELHQGTKVQVLEGFSNWYKIQIADGQIGWLLQNQI 299
>gi|207092428|ref|ZP_03240215.1| hypothetical protein HpylHP_05743 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 180
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P ++ + L K V+V++ +W +I + T G++
Sbjct: 115 KKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LAKDKSVKVLEIQNDWAKIEFSNKTKGYV 171
Query: 111 NKSLLSG 117
LL
Sbjct: 172 FLKLLKK 178
>gi|149190126|ref|ZP_01868402.1| hypothetical protein VSAK1_05000 [Vibrio shilonii AK1]
gi|148836015|gb|EDL52976.1| hypothetical protein VSAK1_05000 [Vibrio shilonii AK1]
Length = 203
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
GP Y ++ + + G V ++ + Q++D G GW+ ++ + S V
Sbjct: 33 MHSGPSSQYRIIGS-INAGDKVRLLSTNRENGYSQVQDSRGRKGWVETKYVTTQESMAVR 91
Query: 125 PWNRKTNNPIYINLYKKPDIQS 146
+ +L +
Sbjct: 92 LPRLEKELTEAKSLLANARETA 113
>gi|308172708|ref|YP_003919413.1| general stress protein [Bacillus amyloliquefaciens DSM 7]
gi|307605572|emb|CBI41943.1| general stress protein, similar to cell division inhibitor
[Bacillus amyloliquefaciens DSM 7]
Length = 175
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 12/130 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGK 118
+KA N R P +V T ++ V+V + +W +I D+ G +I+ L +
Sbjct: 50 VKAGELNVRKEPNKQGVIVGTLRSEDA-VKVKQLEGADWAEI-DYKGQKAYISTHFLMKQ 107
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD 174
V+ P +S + A VL G W +
Sbjct: 108 PMKAVTAKQTVFYTPTLET-----GKKSSVKAGETVNVLGWGFSHDGGFDRKWAYVTYDG 162
Query: 175 TEGWIKKQKI 184
G++K +
Sbjct: 163 KAGYVKTADL 172
>gi|255536382|ref|YP_003096753.1| hypothetical protein FIC_02258 [Flavobacteriaceae bacterium
3519-10]
gi|255342578|gb|ACU08691.1| hypothetical protein FIC_02258 [Flavobacteriaceae bacterium
3519-10]
Length = 141
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
V + S N R P T++ KG V +V++ ++W ++R DG G+ L
Sbjct: 82 VATENSNLNLRQEPSTDATIIGK-ANKGETVTLVEQTSDDWWKVRTADGEEGYAYSRYLR 140
Query: 117 G 117
Sbjct: 141 A 141
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL ++P + I+ K G +T+ E W EG+ + +
Sbjct: 83 ATENSNLNLRQEPSTDATIIGKANKGETVTLVEQTSDDWWKVRTADGEEGYAYSRYL 139
>gi|104781080|ref|YP_607578.1| hypothetical protein PSEEN1937 [Pseudomonas entomophila L48]
gi|95110067|emb|CAK14772.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 216
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ + R GP + +V T L G V + N+ Q+R G + WI S L
Sbjct: 39 RWVS-DSLSTYVRSGPTDGHRIVGT-LKSGQKVTLQTTQGNYSQVRGQSGDLVWILTSDL 96
Query: 116 SGKR 119
Sbjct: 97 QAVP 100
>gi|313671983|ref|YP_004050094.1| sh3 type 3 domain protein [Calditerrivibrio nitroreducens DSM
19672]
gi|312938739|gb|ADR17931.1| SH3 type 3 domain protein [Calditerrivibrio nitroreducens DSM
19672]
Length = 410
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN----PIYINLYKKPDIQSI 147
+E + + D D + + L+ K ++ V + + N + L K+PD +
Sbjct: 307 QEKNDILKKIDQDVAS--VEEKKLASKENSEVRKQDVEKKNCVVLKANLKLRKEPDKNAE 364
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + G L I E + W GWIK++
Sbjct: 365 YLMVIPKGTKLVILEKNDGWVKVNYKKKVGWIKEE 399
>gi|219849168|ref|YP_002463601.1| restriction endonuclease [Chloroflexus aggregans DSM 9485]
gi|219543427|gb|ACL25165.1| restriction endonuclease [Chloroflexus aggregans DSM 9485]
Length = 359
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIR 101
P+ ++ + N R P + TV+ + V ++ W +I
Sbjct: 273 TATPQPTSTPVRPTASV-FNGGNVRAAPNLQGTVL-DQIHAYETVILLGRSADGVWIRII 330
Query: 102 DFDGTIGWINKSLLS 116
+ G GW+++SLL+
Sbjct: 331 NPRGQEGWVHRSLLT 345
>gi|295097565|emb|CBK86655.1| SH3 domain protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 212
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
+ L + + + EK R+V+ N R GPG Y +V T +
Sbjct: 7 MLKLRLIGLTLLAFSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-VNA 58
Query: 85 GLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V +++ N+ Q+RD G WI LS S + + +
Sbjct: 59 GEEVTLLQTNADTNYGQVRDSSGRTSWIPLKELSTVPSLRTRVPDLENQVKTLTD 113
>gi|259907108|ref|YP_002647464.1| putative signal transduction protein [Erwinia pyrifoliae Ep1/96]
gi|224962730|emb|CAX54185.1| conserved uncharacterized protein YgiM [Erwinia pyrifoliae Ep1/96]
gi|283476910|emb|CAY72773.1| Uncharacterized protein ygiM precursor [Erwinia pyrifoliae DSM
12163]
Length = 206
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVS 124
+R GPG Y +V T L G VE++++ +N + QIRD G WI + LS + S +
Sbjct: 36 ARSGPGNDYRLVGT-LNAGEEVELLQKNDNTKYGQIRDSQGRTTWIPLAQLSEQPSLRIR 94
Query: 125 PWNRKTNNPIY 135
+
Sbjct: 95 VPQLEQQVKDL 105
>gi|118591647|ref|ZP_01549043.1| hypothetical protein SIAM614_21927 [Stappia aggregata IAM 12614]
gi|118435640|gb|EAV42285.1| hypothetical protein SIAM614_21927 [Stappia aggregata IAM 12614]
Length = 481
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC------SGEWCFGYN 172
+ I P++ +N+ ++P + S V +V+ G + I C G W
Sbjct: 395 PTVIADPYDWMRTIARDVNVRQQPSLDSEAVGRVQIGDKVRISGCRIVSGPQGVWYQLST 454
Query: 173 LDTEGWIKKQKI 184
GWI + +
Sbjct: 455 G---GWISARFV 463
>gi|188994389|ref|YP_001928641.1| probable aerotolerance-related exported protein BatE [Porphyromonas
gingivalis ATCC 33277]
gi|188594069|dbj|BAG33044.1| probable aerotolerance-related exported protein BatE [Porphyromonas
gingivalis ATCC 33277]
Length = 302
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L+ L + + + ++++F + LA K F + + AS AN
Sbjct: 191 LLFLLGGSRKLRRG--GFYAAWVSMFFCILFNLAAFRRKADFNDD---SYCIMMASVANV 245
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ P T + L +G+ V + E + W I DG GW+ ++L+
Sbjct: 246 KSSPDENGTTLFE-LHEGVRVRITGEAIDGWYPIELADGKEGWLPATVLT 294
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGY-NLDTEGWIKKQKI 184
N+ PD + ++ GV + I E W EGW+ +
Sbjct: 240 ASVANVKSSPDENGTTLFELHEGVRVRITGEAIDGWYPIELADGKEGWLPATVL 293
>gi|237729976|ref|ZP_04560457.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908582|gb|EEH94500.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 206
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + A+SH +E R+V+ N R GPG Y +V T + G
Sbjct: 6 LIGLTLLALSATAVSHAEEK-------RYVS---DELNTWVRSGPGDNYRLVGT-VNAGE 54
Query: 87 PVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +++ N + Q++D G WI L+ S + + +
Sbjct: 55 EVTLLQTDANTNYGQVKDSTGRTAWIPLKELNSTPSLRTRVPDLENQVKTLTD 107
>gi|197119222|ref|YP_002139649.1| hypothetical protein Gbem_2849 [Geobacter bemidjiensis Bem]
gi|197088582|gb|ACH39853.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 158
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GWI 179
T + L K P ++ +VA ++ +T +CSG W + D + GW
Sbjct: 31 TVTAPEMRLRKSPSKKAKVVAIIKKDTKVTAEQCSGGWVKVSSQDGKLNGYIGGWA 86
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSG 117
T+ A R P VV + K V + W ++ DG + G+I L+
Sbjct: 31 TVTAPEMRLRKSPSKKAKVV-AIIKKDTKVTAEQCSGGWVKVSSQDGKLNGYIGGWALAA 89
Query: 118 KRSAIVSPWNRKTNNPIYINLYKK 141
+ + + + + +
Sbjct: 90 APTQVAEAPATQVADTAPSTIAAQ 113
>gi|323137566|ref|ZP_08072643.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322397192|gb|EFX99716.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 134
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 16/52 (30%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L P + +VA G L + +W G++ +
Sbjct: 29 AEPVQLRAGPGARHRVVASAPAGATLVVLRDGEQWTKVSLDGRRGYVATATL 80
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
A R GPG + VV G + V+++ E W ++ DG G++ + L
Sbjct: 29 AEPVQLRAGPGARHRVV-ASAPAGATLVVLRDGEQWTKVSL-DGRRGYVATATLVEAPPV 86
Query: 122 IVSPWNRKT 130
V+P + T
Sbjct: 87 AVAPADDPT 95
>gi|319952793|ref|YP_004164060.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319421453|gb|ADV48562.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 252
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV----TIKAS 63
+LY + +I S I +L +AL++ K K P V + +
Sbjct: 145 LLYYFLANATLKRI---SFISSLVFLVIALASIALAYLKYGEFKDDQPAIVFEKESSIQA 201
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
N R L +G V V++ +W +I+ DG GWI S
Sbjct: 202 EPNGRS-------TETFKLHEGTKVMVLETLNDWSKIKIPDGKTGWIPTS 244
>gi|228471637|ref|ZP_04056411.1| NLP/P60 protein [Capnocytophaga gingivalis ATCC 33624]
gi|228277056|gb|EEK15742.1| NLP/P60 protein [Capnocytophaga gingivalis ATCC 33624]
Length = 259
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ + ++ +S ++++ G L I + +WC+ D EGW++ +++
Sbjct: 10 VPIREESSHKSEQISQLLYGELCFIIKKEDDWCYIRTDFDDYEGWVEARQL 60
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 90 VVKEYENWRQIR-DFDGTIGWINKSLLSGKRSAI 122
++K+ ++W IR DFD GW+ L+ AI
Sbjct: 34 IIKKEDDWCYIRTDFDDYEGWVEARQLTPMSEAI 67
>gi|162149312|ref|YP_001603773.1| hypothetical protein GDI_3544 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787889|emb|CAP57487.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 239
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGW 178
V +++ P +V + PG + I C WC GW
Sbjct: 23 VAVPALAAPGVVVGGTDIFAGPSPAYPVVGSLPPGTPVEIFGCESGWGWCDVAEGPYRGW 82
Query: 179 IKKQKI 184
+ ++
Sbjct: 83 VPAGQV 88
>gi|29378399|gb|AAO83901.1| invasion associated protein p60 [Listeria ivanovii]
Length = 522
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVTATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKISYGEGKTGYVNGKYLGT 140
Query: 118 KRSAIVSPWNRKT 130
++ +P ++
Sbjct: 141 AVTSAPAPEVKEE 153
>gi|170759880|ref|YP_001786603.1| glycosy hydrolase family protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169406869|gb|ACA55280.1| glycosyl hydrolase, family 18 [Clostridium botulinum A3 str. Loch
Maree]
Length = 504
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+K N R P I V+ + KG + ++ Y+++ +I+ F+G G+++K+++
Sbjct: 104 MKVEDGNIRGQPSINSKVLYK-MAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVD 159
>gi|320539906|ref|ZP_08039565.1| putative predicted signal transduction protein (SH3 domain)
[Serratia symbiotica str. Tucson]
gi|320030092|gb|EFW12112.1| putative predicted signal transduction protein (SH3 domain)
[Serratia symbiotica str. Tucson]
Length = 206
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + L + + P+ A + +K R+++ GPG Y +V T
Sbjct: 1 MQKLRLICLTVLSFSTPLGAHAEDK---------RYIS-DELSTYVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRS 120
L G V ++ + ++ QIRD G I WI LS S
Sbjct: 50 LNAGEAVTLLSVNDSTDYGQIRDPKGRITWIPLEHLSQTPS 90
>gi|114704911|ref|ZP_01437819.1| hypothetical protein FP2506_08241 [Fulvimarina pelagi HTCC2506]
gi|114539696|gb|EAU42816.1| hypothetical protein FP2506_08241 [Fulvimarina pelagi HTCC2506]
Length = 386
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++N+ P++ + I+ + G LT+ EC GEWC +EG++ +
Sbjct: 317 AKTHVNMRDAPEMDAGILTVLSEGAPLTVMEC-GEWCKVRFEASEGYVYGTYV 368
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 47 EIFEKKPLPRFVT----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + P RF + N R P + ++ L++G P+ V+ E W ++R
Sbjct: 299 KPIGELPDGRFQAGQPGFAKTHVNMRDAPEMDAGILTV-LSEGAPLTVM-ECGEWCKVR- 355
Query: 103 FDGTIGWINKSLLS 116
F+ + G++ + +
Sbjct: 356 FEASEGYVYGTYVG 369
>gi|317013037|gb|ADU83645.1| hypothetical protein HPLT_06275 [Helicobacter pylori Lithuania75]
Length = 192
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +KPL V + + N R P ++ L K V+V++ +W +I
Sbjct: 119 TPTTPTIGQKPLEYKVAV--NSVNVRAFPSTKGKILGLLL-KNKSVKVLEIQNDWAEIEF 175
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 176 SNKTKGYVFLKLLKK 190
>gi|254779793|ref|YP_003057899.1| hypothetical protein HELPY_1226 [Helicobacter pylori B38]
gi|254001705|emb|CAX29936.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 196
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P ++ +L K V+V++ W +I + T G++
Sbjct: 131 KKPLEYKVAV--SGVNVRAFPSTKGKILGLFL-KNKSVKVLEIQNGWAEIEFSNKTKGYV 187
Query: 111 NKSLLSG 117
LL
Sbjct: 188 FLKLLKK 194
>gi|295401204|ref|ZP_06811177.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus thermoglucosidasius C56-YS93]
gi|294976797|gb|EFG52402.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus thermoglucosidasius C56-YS93]
Length = 989
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
T+ A+ N R G + +V T L G V+V+++ +W +I+
Sbjct: 733 TVTATTLNVREGTSTSHWIVGT-LKAGDIVQVIRQVGDWYEIK 774
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTN 131
V + KG+ VVKE NW + G IG+++KS + S R V
Sbjct: 497 VPFASIKKGVSYPVVKELGNWYGV-GVSGRIGYVHKSAVKIPFKSTDRYFEVL------- 548
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +Y + I+VA +E G + G W ++ K
Sbjct: 549 -EDRLPVYDNSTGKLIVVAYLEKGQIFPRLRDYGNWHEIKYGKGVAYVWKAS 599
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGT----IGWINKSLLSGKRSA-IVSPWNRKTNNPIYI 136
L KG +K+Y NW QI+ G G S S R+A +P + +
Sbjct: 427 LEKGQEFPRIKDYGNWHQIQFGKGVAYVWKGSTEPSSGSSIRNANSAAPTGITFTTLVDV 486
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++Y + A ++ GV + + G W G++ K +
Sbjct: 487 SVYDNSSGALVPFASIKKGVSYPVVKELGNWYGVGVSGRIGYVHKSAV 534
>gi|145297827|ref|YP_001140668.1| hypothetical protein ASA_0766 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850599|gb|ABO88920.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 201
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L I L AL+ R+V+ GPG + ++ + + G P
Sbjct: 3 ALLGILICLCAQQALADT----------RYVS-DNIFTFIHNGPGTQFRILGS-VKAGEP 50
Query: 88 VEV--VKEYENWRQIRDFDGTIGWINKSLLSGK 118
+EV V + Q+ D G GWI + L G+
Sbjct: 51 LEVKAVNNEAGFTQVVDGRGREGWIKNAELQGE 83
>gi|322806820|emb|CBZ04389.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 255
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N P +N+ +K S I+ + G + + G+W Y G+I ++ I
Sbjct: 200 NTPSGVNVREKKSTSSKILGTLVNGAKVRLYRKEGDWIHIYYPPHGGYIYEKYI 253
>gi|168070953|ref|XP_001786997.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162659978|gb|EDQ48189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 289
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNL 173
L+ ++ + + + +++ IVA++ G ++ I S +W
Sbjct: 161 LTVEKDGYAIQQAKVVQDDDPQLVRTGASLRTPIVAELSSGAVVDILGQSDKWYRVLTAD 220
Query: 174 DTEGWIKKQKI 184
G++ ++ +
Sbjct: 221 GIAGFLPRESL 231
>gi|57867127|ref|YP_188770.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
RP62A]
gi|81674360|sp|Q5HNS0|LYTH_STAEQ RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|57637785|gb|AAW54573.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
epidermidis RP62A]
Length = 291
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG + + W ++++ GT GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGESFKKIDRKGKWIEVQNHAGTEKGWVAGW 100
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + G+W + +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|27468231|ref|NP_764868.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis ATCC
12228]
gi|81842784|sp|Q8CP02|LYTH_STAES RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|27315777|gb|AAO04912.1|AE016748_146 N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis ATCC
12228]
gi|329724665|gb|EGG61171.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU144]
Length = 291
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG + + W ++++ GT GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGESFKKIDRKGKWIEVQNHAGTEKGWVAGW 100
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + G+W + +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|260429374|ref|ZP_05783351.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
gi|260419997|gb|EEX13250.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
Length = 221
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
A E E LP + + N R GPG + VV L++G VEV+ +
Sbjct: 135 LAAVATTSDAAPEDAELAVLPDMRKVTGTLVNMRNGPGTRFHVV-DQLSRGASVEVLADP 193
Query: 95 EN-WRQIRDFD-GTIGWINKSLL 115
W +++ + +GW++ L
Sbjct: 194 GEGWVRLKVTESNRVGWMSDDFL 216
>gi|312109450|ref|YP_003987766.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. Y4.1MC1]
gi|311214551|gb|ADP73155.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. Y4.1MC1]
Length = 989
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
T+ A+ N R G + +V T L G V+V+++ +W +I+
Sbjct: 733 TVTATTLNVREGTSTSHWIVGT-LKAGDIVQVIRQVGDWYEIK 774
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTN 131
V + KG+ VVKE NW + G IG+++KS + S R V
Sbjct: 497 VPFASIKKGVSYPVVKELGNWYGV-GVSGRIGYVHKSAVKIPFKSTDRYFEVL------- 548
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +Y + I+VA +E G + G W ++ K
Sbjct: 549 -EDRLPVYDNSTGKLIVVAYLEKGQIFPRLRDYGNWHEIKYGKGVAYVWKAS 599
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGT----IGWINKSLLSGKRSA-IVSPWNRKTNNPIYI 136
L KG +K+Y NW QI+ G G S S R+A +P + +
Sbjct: 427 LEKGQEFPRIKDYGNWHQIQFGKGVAYVWKGSTEPSSGSSIRNANSAAPTGITFTTLVDV 486
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++Y + A ++ GV + + G W G++ K +
Sbjct: 487 SVYDNSSGALVPFASIKKGVSYPVVKELGNWYGVGVSGRIGYVHKSAV 534
>gi|254719546|ref|ZP_05181357.1| hypothetical protein Bru83_08383 [Brucella sp. 83/13]
gi|265984555|ref|ZP_06097290.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|306838486|ref|ZP_07471327.1| SH3 type 3 domain-containing protein [Brucella sp. NF 2653]
gi|264663147|gb|EEZ33408.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|306406450|gb|EFM62688.1| SH3 type 3 domain-containing protein [Brucella sp. NF 2653]
Length = 193
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|229162200|ref|ZP_04290169.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus R309803]
gi|228621250|gb|EEK78107.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus R309803]
Length = 535
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 12/104 (11%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
I+ + Y+PK I L I + +K I V I N
Sbjct: 431 IVTGMGDNLYVPKGTTTRGETAAFILNMLQVIETGNVQKGIGT-------VEINGIGVNV 483
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
R G G Y+VV +KG V +E W +I GT W+
Sbjct: 484 RSGAGSSYSVV-RKASKGEKATVYEEKNGWLRI----GTDEWVY 522
>gi|256820362|ref|YP_003141641.1| hypothetical protein Coch_1535 [Capnocytophaga ochracea DSM 7271]
gi|315223479|ref|ZP_07865336.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
gi|256581945|gb|ACU93080.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
7271]
gi|314946652|gb|EFS98643.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
Length = 251
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
Y+ L +G VE++++ +W +IR +G IGW +S L
Sbjct: 207 SYSNEVVQLHEGTKVEIIEKNNDWIKIRLANGKIGWTKESAL 248
>gi|261822803|ref|YP_003260909.1| signal transduction protein [Pectobacterium wasabiae WPP163]
gi|261606816|gb|ACX89302.1| SH3 domain protein [Pectobacterium wasabiae WPP163]
Length = 206
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + ++ A + EK + L GPG Y +V T
Sbjct: 1 MQKLGLLCFTLFSLTLSWTAQAEEKRYISDELLTY----------VHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ G V + V E + QIRD WI LS S + +
Sbjct: 50 VNAGTEVTLLSVNESAGYAQIRDDKNRTTWIPLDQLSNTPSLRTRVPELEKQVKDLTD 107
>gi|84501010|ref|ZP_00999245.1| hypothetical protein OB2597_02707 [Oceanicola batsensis HTCC2597]
gi|84391077|gb|EAQ03495.1| hypothetical protein OB2597_02707 [Oceanicola batsensis HTCC2597]
Length = 301
Score = 40.8 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCF---GYNLDTEGWIKKQKI 184
+N+ + +S IVA G++L C WC EGW + +
Sbjct: 139 EATLNVRRDASTRSGIVAHAPLGIILRNLGCEARSDRTWCRIGYIDASGLEGWAAAEYL 197
>gi|149918825|ref|ZP_01907312.1| carboxyl-terminal protease [Plesiocystis pacifica SIR-1]
gi|149820426|gb|EDM79842.1| carboxyl-terminal protease [Plesiocystis pacifica SIR-1]
Length = 1052
Score = 40.8 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG---WIKKQKI 184
K + LY D + +VA++ G LL + SG+W +G W+ +
Sbjct: 864 KVGGDEPVRLYNGADSSAPVVAELPAGTLLEVVGSSGDWRALAGPKGQGRRLWVPADLL 922
>gi|319638989|ref|ZP_07993747.1| hypothetical protein HMPREF0604_01371 [Neisseria mucosa C102]
gi|317399893|gb|EFV80556.1| hypothetical protein HMPREF0604_01371 [Neisseria mucosa C102]
Length = 170
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 26/142 (18%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
AN R+ P ++ + +++++ W I+ G++++S
Sbjct: 31 GSANVRVAPDTRSKIMTVLNYESRKHKILRKQGKWFHIQLDGIRTGYVHQSQ------GF 84
Query: 123 VSPWNRKTNNPIYINLY-----KKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLD- 174
+ + N+ ++P Q I+ + G + I G+W + N
Sbjct: 85 IVHNYVVASPDGSANVRNNSYPEEPIGQGEIIKTLPNGTRVQIAPAFRKGDWLWYSNQGA 144
Query: 175 ------------TEGWIKKQKI 184
+G+I K ++
Sbjct: 145 YTEKDEYGHHVSIQGYIHKSQL 166
>gi|170738396|ref|YP_001767051.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168192670|gb|ACA14617.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 397
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 20/59 (33%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
R P V L V+ W +R G GW++ + R A V+P
Sbjct: 339 LRSRPSASEGVRLMKLGPDALFTVLGRQGAWLNVRLRGGETGWVHGDYVGCCRRAPVTP 397
>gi|91199826|emb|CAI78182.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC
23877]
gi|126347529|emb|CAJ89240.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC
23877]
Length = 111
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 13/113 (11%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR---------FVTIKASR 64
+R + + + + A + E + FVT +
Sbjct: 1 MRHVSRRTSAVGITLGILVPLAGMSSTASASIPGTVEGPARVQNICFERHTCFVT--ENN 58
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-WINKSLLS 116
N R GPG Y + + +G +V + +W + + G WI+ + L
Sbjct: 59 VNFRSGPGTNYPSLGQ-VHRGQGFDVAELSGDWFKGTLWGGPSNVWIHWAYLD 110
>gi|242242904|ref|ZP_04797349.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
W23144]
gi|242233619|gb|EES35931.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
W23144]
Length = 291
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
A R GP Y V+ + KG + + W ++++ GT GW+
Sbjct: 49 TDNAELRTGPNAAYPVIYK-IDKGESFKKIDRKGKWIEVQNHAGTEKGWVAGW 100
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K++ G + G+W + +GW+
Sbjct: 50 DNAELRTGPNAAYPVIYKIDKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|220927492|ref|YP_002504401.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219997820|gb|ACL74421.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 308
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V++V + +W +I DGT GW+ +S S + +Y +
Sbjct: 75 VKIVSQEGSWTRIMLLDGTTGWVKTKYISRDTSCVTDGSINNKIVVTAKTVYVYIGTDND 134
Query: 148 IVAK-VEPG-VLLTIRECSGEWCFGYNLDTEGWIK 180
I K V G L ++ + + + +GW++
Sbjct: 135 IKYKQVVLGTELYSVSKTKTGYDVLLPNNKKGWVE 169
>gi|306844512|ref|ZP_07477101.1| SH3 type 3 domain-containing protein [Brucella sp. BO1]
gi|306275123|gb|EFM56879.1| SH3 type 3 domain-containing protein [Brucella sp. BO1]
Length = 193
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|296104713|ref|YP_003614859.1| putative signal transduction protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059172|gb|ADF63910.1| putative signal transduction protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 206
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
+ L + + + EK R+V+ N R GPG Y +V T +
Sbjct: 1 MLKLRLIGLTLLAFSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-VNA 52
Query: 85 GLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V +++ N+ Q+RD G WI LS S + + +
Sbjct: 53 GEEVTLLQTNTETNYGQVRDSSGRTSWIPLKELSTVPSLRTRVPDLENQVKTLTD 107
>gi|295132202|ref|YP_003582878.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
gi|294980217|gb|ADF50682.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
Length = 249
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+F + + +L R + + + L+ +++YF A S + + +
Sbjct: 145 LFYYYGRT--TLSKRIFFITSMVSILLCIVSVYF------AFSQQNIQLNN----NYAIV 192
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
A A R P + L +G +++++Y+ W +I DG GW+
Sbjct: 193 FAEEAGVRSEPNLRGEPAFL-LHEGTKAKLLEKYQEWYKIEIADGKQGWM 241
>gi|291520205|emb|CBK75426.1| Cell Wall Hydrolase./Bacterial SH3 domain [Butyrivibrio
fibrisolvens 16/4]
Length = 409
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 8/101 (7%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSL----LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ ++ W +I G+++ + A+ + T + + + + S
Sbjct: 146 IDVFDGWYEIE-SGNAHGFVSADYCVTGMEAYEYALDVCDSYATTDVNGLRIRSEASEDS 204
Query: 147 IIVAKVEPGVLLTI---RECSGEWCFGYNLDTEGWIKKQKI 184
I+ V G L + E W + + G++K +
Sbjct: 205 KILKVVSKGTKLEVCSDAEEIDGWVAVTSGNDTGYVKADYV 245
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 21/49 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
Y+++ + D S ++ K+ + T+ + W + + G++
Sbjct: 119 DYLSIRSEADGSSEVIGKLRTNDIATLIDVFDGWYEIESGNAHGFVSAD 167
>gi|270263171|ref|ZP_06191441.1| putative signal transduction protein [Serratia odorifera 4Rx13]
gi|270042859|gb|EFA15953.1| putative signal transduction protein [Serratia odorifera 4Rx13]
Length = 206
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + LA+ + A + +K R+++ GPG Y +V T
Sbjct: 1 MQKLRLICLAVLSFSITWGAHAEDK---------RYIS-DELSTYVHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
L G V + V E N+ QIRD G WI LS S
Sbjct: 50 LNAGEEVALLSVNESTNYGQIRDPKGRNIWIPLDQLSQTPS 90
>gi|195941158|ref|ZP_03086540.1| putative signal transduction protein [Escherichia coli O157:H7 str.
EC4024]
Length = 206
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
+ L + + + EK R+V+ N R GPG Y +V T +
Sbjct: 1 MLKLRLIGLTLLAFSAATAVHAEEK----RYVS---DELNTWVRSGPGDNYRLVGT-VNA 52
Query: 85 GLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V +++ N+ Q+RD G WI LS S + + +
Sbjct: 53 GEEVTLLQTNADTNYGQVRDSSGRTSWIPLKELSTVPSLRTRVPDLENQVKTLTD 107
>gi|167758193|ref|ZP_02430320.1| hypothetical protein CLOSCI_00531 [Clostridium scindens ATCC 35704]
gi|167664090|gb|EDS08220.1| hypothetical protein CLOSCI_00531 [Clostridium scindens ATCC 35704]
Length = 500
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN- 96
+ + E + LP V + S R GPG Y Y +G+ +VKE +
Sbjct: 415 AVFSNEVEAQKKPNVNLPYKVKVDISDLRIRKGPGTNYGSAG-YTGEGV-FTIVKEKDGP 472
Query: 97 ----WRQIRDFDGTI-GWIN 111
W ++ ++G GWI+
Sbjct: 473 GATKWGLLKSYEGQENGWIS 492
>gi|296536617|ref|ZP_06898693.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296263051|gb|EFH09600.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 175
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P + +VA + PG + ++ C WC GW+ +
Sbjct: 31 TSLNMRAGPGTEYPVVAVLAPGTEVDVQGCLEGYGWCDVIIQQQRGWLSGAYL 83
>gi|255656752|ref|ZP_05402161.1| putative cell-wall hydrolase [Clostridium difficile QCD-23m63]
gi|296452419|ref|ZP_06894120.1| probable cell-wall hydrolase [Clostridium difficile NAP08]
gi|296877768|ref|ZP_06901794.1| probable cell-wall hydrolase [Clostridium difficile NAP07]
gi|296258749|gb|EFH05643.1| probable cell-wall hydrolase [Clostridium difficile NAP08]
gi|296431219|gb|EFH17040.1| probable cell-wall hydrolase [Clostridium difficile NAP07]
Length = 235
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
IL+ + L A++ P+ V + N R G VV
Sbjct: 10 ILKKFIAMVLIAGVVTVEAGAITASAAELTNSPMSATVD-QCDFLNVRSGASANDAVVGK 68
Query: 81 YLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ G VEV++ + W +I+ D GW+N L+
Sbjct: 69 -INTGDKVEVLELHSNGWIKIKTVDNVTGWVNGDYLT 104
>gi|148559929|ref|YP_001259389.1| hypothetical protein BOV_1461 [Brucella ovis ATCC 25840]
gi|148371186|gb|ABQ61165.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 193
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|146340414|ref|YP_001205462.1| hypothetical protein BRADO3450 [Bradyrhizobium sp. ORS278]
gi|146193220|emb|CAL77235.1| hypothetical protein BRADO3450 [Bradyrhizobium sp. ORS278]
Length = 245
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+ P +V ++ G +TI C G WC GWI + +
Sbjct: 32 ATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAARAL 82
>gi|110802571|ref|YP_697958.1| bacteriocin [Clostridium perfringens SM101]
gi|110683072|gb|ABG86442.1| bacteriocin [Clostridium perfringens SM101]
Length = 356
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y + L +G V +V + W +I G G+++K ++
Sbjct: 168 NVRKGPGTNYDSIGQ-LHQGEKVSIVATNKEWNKIEYGTG-YGYVHKDFVN 216
>gi|325277627|ref|ZP_08143208.1| SH3 type 3 domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097247|gb|EGB95512.1| SH3 type 3 domain-containing protein [Pseudomonas sp. TJI-51]
Length = 216
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+V+ + R GP + +V T L G + ++ + Q+R +G + WI L
Sbjct: 39 RWVS-DSLSTYVRSGPTDGHRIVGT-LKSGQKLTLLGSQGKYSQVRGQNGDVVWILSDDL 96
Query: 116 SGKR 119
Sbjct: 97 QAVP 100
>gi|258545054|ref|ZP_05705288.1| NLP/P60 family protein [Cardiobacterium hominis ATCC 15826]
gi|258519674|gb|EEV88533.1| NLP/P60 family protein [Cardiobacterium hominis ATCC 15826]
Length = 283
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 13/130 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ---IRDFDGTIGWINKS 113
+ I+ P + Y G P+ ++ + W +RD GWI+ +
Sbjct: 23 YARIRQPETWVHAAPDATSARLSQYT-YGEPLRILDARDGWLHTQSLRDH--YSGWIDAA 79
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S + + PD++S + + P L I G++ ++
Sbjct: 80 ATEPHNS----EPHWTHTTIAVAPVTAAPDLKSTWLTALPPDACLEIIGEDGDYLQLHDG 135
Query: 174 DTEGWIKKQK 183
GW+ ++
Sbjct: 136 ---GWLHRRH 142
>gi|256061563|ref|ZP_05451705.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261325572|ref|ZP_05964769.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261301552|gb|EEY05049.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
Length = 193
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|239623522|ref|ZP_04666553.1| SH3 type 3 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521553|gb|EEQ61419.1| SH3 type 3 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 774
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L+ L L + +++ + T+KA+ N R G G Y+ V
Sbjct: 19 KKLKRGLALMLGVMMAANLPASVATPFTMLNSYAYTGSATVKATSLNVRSGAGTGYSSVG 78
Query: 80 TYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLS 116
L G + V+ E W QI+ + GT G +N +S
Sbjct: 79 R-LAAGAAITVIGEQRGTDGNTWYQIQ-YTGTNGAVNTGYVS 118
>gi|254230370|ref|ZP_04923754.1| hypothetical protein VEx25_0269 [Vibrio sp. Ex25]
gi|151937108|gb|EDN55982.1| hypothetical protein VEx25_0269 [Vibrio sp. Ex25]
Length = 241
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 11/148 (7%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+P + ++ + + +L R+++ GP
Sbjct: 20 GSNHSVPTLSPRKIVKGFTVKKLIITVLFTLLAAPAALAAD--RYIS-DDLFTFMHSGPN 76
Query: 73 IMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIV----SPW 126
Y ++ + + G V+++K + + Q+RD G GW+ ++ + S +
Sbjct: 77 NTYRIIGS-VNAGSKVQLIKTNRDTGYTQVRDDRGRTGWVQSKFVTNQESMAIRLPRIEK 135
Query: 127 NRKTNNPIYINLYKKPDI-QSIIVAKVE 153
N K D ++ +V +E
Sbjct: 136 ELAEVKEQLANARKTSDAEKAGLVTSLE 163
>gi|294852829|ref|ZP_06793502.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
gi|294821418|gb|EFG38417.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
Length = 193
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|257451629|ref|ZP_05616928.1| hypothetical protein F3_01097 [Fusobacterium sp. 3_1_5R]
Length = 384
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKG-LPV--EVVKEYENWRQIRDFDGTIGWINKS 113
+V + + AN R PG ++ Y LP+ ++ + W ++R G G+I S
Sbjct: 54 YVFVSSRTANIRDYPGTEGNIIEKYSYNDKLPLLEKIYVKGNYWYKVRTLKGNEGYIAAS 113
Query: 114 LLSGKRSA 121
+S KR+
Sbjct: 114 -VSKKRNF 120
>gi|217032310|ref|ZP_03437806.1| hypothetical protein HPB128_132g8 [Helicobacter pylori B128]
gi|298735726|ref|YP_003728251.1| hypothetical protein HPB8_230 [Helicobacter pylori B8]
gi|216945976|gb|EEC24590.1| hypothetical protein HPB128_132g8 [Helicobacter pylori B128]
gi|298354915|emb|CBI65787.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 196
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P ++ + LTK V+V++ +W +I + T G++
Sbjct: 131 KKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LTKDKSVKVLEIQNDWAKIEFSNKTKGYV 187
Query: 111 NKSLLSG 117
LL
Sbjct: 188 FLKLLKK 194
>gi|253578003|ref|ZP_04855275.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850321|gb|EES78279.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 169
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ + + I+ + G + GEW G+I+ +
Sbjct: 115 TASEECNVRAEASTDADILGVISAGDQVQKTGTDGEWVQIDYDGQTGYIRGDLL 168
>gi|281420092|ref|ZP_06251091.1| putative BatD protein [Prevotella copri DSM 18205]
gi|281405892|gb|EFB36572.1| putative BatD protein [Prevotella copri DSM 18205]
Length = 866
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++Y + KI IF +A+ F L+ + A + + + I A N
Sbjct: 761 LVYLFGSHIVLRKIGFFGGIFFVAV-FLLSNLFAYQQRQMLINRTG----AIIIAPSVNV 815
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+ P +V L +G V++ + + WR+I+ DG GWI +
Sbjct: 816 KKTPAKT-SVDLFLLHEGTRVDITDKAMKGWREIKVGDGREGWIETKAI 863
>gi|161619458|ref|YP_001593345.1| SH3 type 3 domain-containing protein [Brucella canis ATCC 23365]
gi|225627953|ref|ZP_03785989.1| SH3 type 3 domain-containing protein [Brucella ceti str. Cudo]
gi|254702228|ref|ZP_05164056.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|254704763|ref|ZP_05166591.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|254708176|ref|ZP_05170004.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|254710547|ref|ZP_05172358.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|254714730|ref|ZP_05176541.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|254717790|ref|ZP_05179601.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|256032041|ref|ZP_05445655.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|256160237|ref|ZP_05457931.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|256255443|ref|ZP_05460979.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|256369927|ref|YP_003107438.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260169176|ref|ZP_05755987.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|260565992|ref|ZP_05836462.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261219640|ref|ZP_05933921.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261222650|ref|ZP_05936931.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|261315684|ref|ZP_05954881.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261318122|ref|ZP_05957319.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322528|ref|ZP_05961725.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261752802|ref|ZP_05996511.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261755461|ref|ZP_05999170.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261758691|ref|ZP_06002400.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|265989152|ref|ZP_06101709.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265998614|ref|ZP_06111171.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|161336269|gb|ABX62574.1| SH3 type 3 domain protein [Brucella canis ATCC 23365]
gi|225617116|gb|EEH14162.1| SH3 type 3 domain-containing protein [Brucella ceti str. Cudo]
gi|256000090|gb|ACU48489.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260155510|gb|EEW90590.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260921234|gb|EEX87887.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|260924729|gb|EEX91297.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261295218|gb|EEX98714.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261297345|gb|EEY00842.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261304710|gb|EEY08207.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261738675|gb|EEY26671.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|261742555|gb|EEY30481.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261745214|gb|EEY33140.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262553238|gb|EEZ09072.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|264661349|gb|EEZ31610.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 193
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|300718447|ref|YP_003743250.1| signal transduction protein [Erwinia billingiae Eb661]
gi|299064283|emb|CAX61403.1| putative signal transduction protein [Erwinia billingiae Eb661]
Length = 206
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 16/135 (11%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGL 86
+ + + A H +E R+++ + R GPG + +V T L G
Sbjct: 6 LIGLTLLTFSVAASVHAEEK-------RYIS---DELSTWVRSGPGDNFRLVGT-LNAGE 54
Query: 87 PVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
V++++ + ++ QIRD +G WI +S LS + S + + D
Sbjct: 55 EVQLLQSNDSTHYAQIRDSNGRTTWIPESQLSQQPSLRTRVPQLEQQVKDLTDKLANIDG 114
Query: 145 Q-SIIVAKVEPGVLL 158
+ A+++ V
Sbjct: 115 SWNQRTAEMQKKVAG 129
>gi|163843765|ref|YP_001628169.1| SH3 type 3 domain-containing protein [Brucella suis ATCC 23445]
gi|163674488|gb|ABY38599.1| SH3 type 3 domain protein [Brucella suis ATCC 23445]
Length = 193
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|323486841|ref|ZP_08092159.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
gi|323690859|ref|ZP_08105153.1| hypothetical protein HMPREF9475_00014 [Clostridium symbiosum
WAL-14673]
gi|323399854|gb|EGA92234.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
gi|323505078|gb|EGB20846.1| hypothetical protein HMPREF9475_00014 [Clostridium symbiosum
WAL-14673]
Length = 293
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + N +N+ P IV ++ G + +R+ WC + ++ K+
Sbjct: 227 AATVKYKVNADTLNVRATPATDGRIVVQLARGAEVEYVRDHDDRWCIIRYNGQDAYVAKE 286
Query: 183 KI 184
+
Sbjct: 287 YL 288
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 44 HEKEIFEKKPLPRFVTIK----ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WR 98
E E ++P T+K A N R P +V L +G VE V+++++ W
Sbjct: 214 TESESPAEEPTTEAATVKYKVNADTLNVRATPATDGRIV-VQLARGAEVEYVRDHDDRWC 272
Query: 99 QIRDFDGTIGWINKSLLS 116
IR ++G ++ K L+
Sbjct: 273 IIR-YNGQDAYVAKEYLT 289
>gi|116251685|ref|YP_767523.1| hypothetical protein RL1921 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256333|emb|CAK07414.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 865
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+NL P V V G + ++EC G WC G++ + +
Sbjct: 29 AVNLRSGPGTGFAAVGNVPEGAQVDLKECDASGAWCAVDFGGENGFVSGRYL 80
>gi|187778403|ref|ZP_02994876.1| hypothetical protein CLOSPO_01996 [Clostridium sporogenes ATCC
15579]
gi|187772028|gb|EDU35830.1| hypothetical protein CLOSPO_01996 [Clostridium sporogenes ATCC
15579]
Length = 256
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ GWIN L GK I +P +N+ S I+ + G + + G
Sbjct: 187 STGWIN---LDGKTGNIYTPSG--------VNVRDGKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSKYI 254
>gi|223939093|ref|ZP_03630977.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223892253|gb|EEF58730.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 280
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ R + L+N + + + L LA++ ++ K + + A+ GP
Sbjct: 169 MQWRPDIRPKLRNPALVSGLAFVLLGICLAVAFNEDYLTKTAI-----VITGEADVHNGP 223
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ G + V+ + + W Q+ D +GW+ + +
Sbjct: 224 LDESQAAYK-VRDGAELIVLDQKDGWYQVSDQSQRVGWLRQDQV 266
>gi|154253500|ref|YP_001414324.1| SH3 type 3 domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154157450|gb|ABS64667.1| SH3 type 3 domain protein [Parvibaculum lavamentivorans DS-1]
Length = 293
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-- 95
P + + +E P+ S R PG V+ L P+ +V + E
Sbjct: 207 PAVEATPAQEAATVAPMEDANAFAISNVYLRASPGNAGEVIGV-LDACEPLRLVGQDEGA 265
Query: 96 NWRQIRDFDGTIGWINKSLLSGK 118
W +I DGT GW+ + + K
Sbjct: 266 QWHRIERADGTAGWVFRRYVGDK 288
>gi|172057221|ref|YP_001813681.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989742|gb|ACB60664.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 244
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ T+ + + A + ++ V + A R GP Y +V + G
Sbjct: 4 ILTTVTMSALVVSGFASTGTGKVEAASSSSYKVKVMADGLRVRTGPSTKYKIVG-GVNAG 62
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+ + W +I + G ++ S + KR +I K + L
Sbjct: 63 KTFKYYGKKGKWTKIS-YGGKKRYVYSSYV--KRYSIGKKATAKKASHSTGFLR 113
>gi|319654720|ref|ZP_08008799.1| polysugar degrading enzyme [Bacillus sp. 2_A_57_CT2]
gi|317393636|gb|EFV74395.1| polysugar degrading enzyme [Bacillus sp. 2_A_57_CT2]
Length = 309
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
G V V++E + W + +D G GW+ K+ L+ +
Sbjct: 65 GEEVIVLEEKDGWVHVVVPGQPSSKDERGYPGWVPKAQLTKNEDWKLGSRKAAVIQKKKA 124
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
LY +I + +L + EW + G++K + +
Sbjct: 125 TLYSNDREPELI---LSYQTILPVLREEAEWIQVQTPEGAGYLKPEDV 169
>gi|163744676|ref|ZP_02152036.1| hypothetical protein OIHEL45_03795 [Oceanibulbus indolifex HEL-45]
gi|161381494|gb|EDQ05903.1| hypothetical protein OIHEL45_03795 [Oceanibulbus indolifex HEL-45]
Length = 226
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+G ++ LS A V + + +N+ P Q IV + G + C
Sbjct: 5 KLGMVSAIALSAA--APVYAQSAEAYAATDLNIRSGPGPQFDIVGVIPGGEAAMVEGCLD 62
Query: 166 E--WCFGYNLDTEGWIKKQKI 184
WC D GW +
Sbjct: 63 GQSWCQVKFGDAMGWSSSDYL 83
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 19/130 (14%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
I++ ++ +A+ AP+ A S E N R GPG + +V
Sbjct: 2 NIVKLGMVSAIALSAA-APVYAQSAEAYAATDL-------------NIRSGPGPQFDIVG 47
Query: 80 TYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIYI 136
+ G V + W Q++ D +GW + L+ G V+ R + +
Sbjct: 48 V-IPGGEAAMVEGCLDGQSWCQVKFGD-AMGWSSSDYLAVGVEEQAVALATRPASVEVGT 105
Query: 137 NLYKKPDIQS 146
Y+ P+ +
Sbjct: 106 VTYENPEGTA 115
>gi|53711979|ref|YP_097971.1| hypothetical protein BF0690 [Bacteroides fragilis YCH46]
gi|52214844|dbj|BAD47437.1| hypothetical protein [Bacteroides fragilis YCH46]
Length = 391
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 67 EVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYI 122
>gi|23502380|ref|NP_698507.1| hypothetical protein BR1511 [Brucella suis 1330]
gi|23348364|gb|AAN30422.1| conserved hypothetical protein [Brucella suis 1330]
Length = 193
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|168178140|ref|ZP_02612804.1| hypothetical protein CBN_0806 [Clostridium botulinum NCTC 2916]
gi|182670777|gb|EDT82751.1| hypothetical protein CBN_0806 [Clostridium botulinum NCTC 2916]
Length = 113
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKK 181
+N+ + P S I+ +++ G + I + +W GW+ +
Sbjct: 56 TADVLNVRQSPSTSSNILGQLDYGERVDIVRLWGNDDWIMIEFEGGIGWVAR 107
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 15/112 (13%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEK-----------EIFEKKPLPRFVTIKASRA 65
+ K L ++L + F +++ + K P + A
Sbjct: 1 MIKKKLASALAICSLLTFTYGTTAFAANDSTNNAVQNKNVIQSSRKGPYQYVGMVTADVL 60
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R P ++ L G V++V+ + N W I F+G IGW+ + +
Sbjct: 61 NVRQSPSTSSNILGQ-LDYGERVDIVRLWGNDDWIMIE-FEGGIGWVARPFV 110
>gi|108563618|ref|YP_627934.1| hypothetical protein HPAG1_1193 [Helicobacter pylori HPAG1]
gi|107837391|gb|ABF85260.1| hypothetical protein HPAG1_1193 [Helicobacter pylori HPAG1]
Length = 196
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+KPL V + S N R P ++ + L K V+V++ +W +I + T
Sbjct: 127 PTMGQKPLEYKVAV--SGVNVRAFPSTKGKIIGS-LAKDKSVKVLEIQNDWAKIEFSNKT 183
Query: 107 IGWINKSLLSG 117
G++ LL
Sbjct: 184 KGYVFLKLLKK 194
>gi|29378559|gb|AAO83981.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGTGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA ++T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQQETTQAAPAQQTKTEVKQATPAATTEKDAV 184
>gi|118579060|ref|YP_900310.1| hypothetical protein Ppro_0621 [Pelobacter propionicus DSM 2379]
gi|118501770|gb|ABK98252.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
Length = 210
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 76 TVVCTY--LTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLLSGKRS-----AIVSPWN 127
+ + +PV V+ W ++ D G GW+ + + A +
Sbjct: 77 RLDWILGLAPRNVPVMVMARRGEWLRVTYDDAGREGWVRPRWRNAFETWDELFADRNVRP 136
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGWIK 180
Y L+ +P+ + +A + L + G+W D GW++
Sbjct: 137 LPGLQERYYRLFSRPEGE--PLATLASRPLFRVGMVDGDWLRVVGAQDAAGWLR 188
>gi|217962306|ref|YP_002340876.1| S-layer domain protein [Bacillus cereus AH187]
gi|217063535|gb|ACJ77785.1| S-layer domain protein [Bacillus cereus AH187]
Length = 914
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 633 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 678
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + E G W + W+ + I
Sbjct: 679 VSGRYAPQTVEVYGERDGGWIQIQTSNGLKWVNEGNI 715
>gi|222098287|ref|YP_002532344.1| s-layer-like domain protein [Bacillus cereus Q1]
gi|221242345|gb|ACM15055.1| S-layer-like domain protein [Bacillus cereus Q1]
Length = 913
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 632 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 677
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + E G W + W+ + I
Sbjct: 678 VSGRYAPQTVEVYGERDGGWIQIQTSNGLKWVNEGNI 714
>gi|158522463|ref|YP_001530333.1| peptidase M23B [Desulfococcus oleovorans Hxd3]
gi|158511289|gb|ABW68256.1| peptidase M23B [Desulfococcus oleovorans Hxd3]
Length = 430
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+N+ +PD + V ++ G +T+ + +GEW + G+I+
Sbjct: 2 QTAEIRASLLNMRARPDRDATRVGVLKKGTQVTVLDDTGEWLKISYDNRAGYIR 55
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
I+AS N R P T V L KG V V+ + W +I +D G+I
Sbjct: 4 AEIRASLLNMRARPDRDATRVGV-LKKGTQVTVLDDTGEWLKIS-YDNRAGYI 54
>gi|209544884|ref|YP_002277113.1| SH3 type 3 domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532561|gb|ACI52498.1| SH3 type 3 domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 239
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGW 178
V +++ P +V + PG + I C WC GW
Sbjct: 23 VAVPALAAPGVVVGGTDIFAGPSPAYPVVGSLPPGTPVEIFGCESGWGWCDVAEGPYRGW 82
Query: 179 IKKQKI 184
+ ++
Sbjct: 83 VPAGQV 88
>gi|308184998|ref|YP_003929131.1| hypothetical protein HPSJM_06250 [Helicobacter pylori SJM180]
gi|308060918|gb|ADO02814.1| hypothetical protein HPSJM_06250 [Helicobacter pylori SJM180]
Length = 191
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIR 101
+ + KKPL V + S N R P ++ L KG V+V++ +W +I
Sbjct: 118 APTTPLIGKKPLEYKVAV--SGVNVRAFPSTKGKILGLLLKNKG--VKVLEIQNDWAEIE 173
Query: 102 DFDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 174 FSNKTKGYVFLKLLKK 189
>gi|291523935|emb|CBK89522.1| Bacterial SH3 domain [Eubacterium rectale DSM 17629]
Length = 181
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 18/55 (32%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +KPD + I+ + V L W G++ +
Sbjct: 85 VTTTSSVNMREKPDKNANIITVIGQDVKLEFVSEDNGWTQVIFQGQTGYVSSDYV 139
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+VT +S N R P ++ + + + +E V E W Q+ F G G+++ +
Sbjct: 84 YVTTTSS-VNMREKPDKNANIITV-IGQDVKLEFVSEDNGWTQVI-FQGQTGYVSSDYV 139
>gi|238923082|ref|YP_002936595.1| hypothetical protein EUBREC_0672 [Eubacterium rectale ATCC 33656]
gi|238874754|gb|ACR74461.1| Hypothetical protein EUBREC_0672 [Eubacterium rectale ATCC 33656]
Length = 181
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 18/55 (32%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +KPD + I+ + V L W G++ +
Sbjct: 85 VTTTSSVNMREKPDKNANIITVIGQDVKLEFVSEDNGWTQVIFQGQTGYVSSDYV 139
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+VT +S N R P ++ + + + +E V E W Q+ F G G+++ +
Sbjct: 84 YVTTTSS-VNMREKPDKNANIITV-IGQDVKLEFVSEDNGWTQVI-FQGQTGYVSSDYV 139
>gi|226949962|ref|YP_002805053.1| bacteriophage endolysin [Clostridium botulinum A2 str. Kyoto]
gi|226842480|gb|ACO85146.1| bacteriophage endolysin [Clostridium botulinum A2 str. Kyoto]
Length = 253
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GWIN L GK I +P +N+ +K S I+ + G + + G+W
Sbjct: 186 GWIN---LDGKTGTICTPSG--------VNVREKKSTSSNILETLVNGTTVRVYRKEGDW 234
Query: 168 CFGYNLDTEGWIKKQKI 184
Y G+I + +
Sbjct: 235 IHIYYPSHGGYIYGKYV 251
>gi|88798243|ref|ZP_01113829.1| SH3 domain protein [Reinekea sp. MED297]
gi|88779019|gb|EAR10208.1| SH3 domain protein [Reinekea sp. MED297]
Length = 226
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 20/108 (18%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIM 74
+ L S + L ++ AP A + +++ N R GPG
Sbjct: 1 MTFRSLFQSCLIALILFGATAPAFAETV------------WLS---DELWVNVRTGPGGE 45
Query: 75 YTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
Y + + G +E+++E E+ + ++R +G GW+ K +
Sbjct: 46 YRSL-KTINSGTRMEILEENEDAGYIRVRTENGLEGWLPKRYTQPDPT 92
>gi|312886240|ref|ZP_07745854.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
gi|311301265|gb|EFQ78320.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
Length = 244
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ S LA+ F L + AL ++ + V + + PG +
Sbjct: 152 KASFYGALALIF-LGLVTALMGASQVHYFAAHHQAVVFN-NAVTVKSEPGAASKNLFVIH 209
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWI 110
G V+++++ W +IR +G GW+
Sbjct: 210 -DGTKVDILEDNNGWMRIRLSNGNEGWM 236
>gi|208435145|ref|YP_002266811.1| hypothetical protein HPG27_1195 [Helicobacter pylori G27]
gi|208433074|gb|ACI27945.1| hypothetical protein HPG27_1195 [Helicobacter pylori G27]
Length = 196
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ L K V+V++ +W +I
Sbjct: 123 APTISTMGKKPLEYKVAV--SGVNVRAFPSTKGKILGLLL-KNKSVKVLEIQNDWAEIEF 179
Query: 103 FDGTIGWINKSLLSG 117
+ T G++ LL
Sbjct: 180 SNKTKGYVFLKLLKK 194
>gi|228475189|ref|ZP_04059915.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus hominis SK119]
gi|314936255|ref|ZP_07843602.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
hominis subsp. hominis C80]
gi|228270800|gb|EEK12202.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus hominis SK119]
gi|313654874|gb|EFS18619.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
hominis subsp. hominis C80]
Length = 291
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
+ P+ ++ KVE G + +G+W N D +GW+
Sbjct: 52 AEIRTGPNAGYPVIYKVEKGDSFKKLKTTGKWIEVQNAKGDKKGWVA 98
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-IGWINKSLLS 116
R GP Y V+ + KG + +K W ++++ G GW+ S
Sbjct: 54 IRTGPNAGYPVIYK-VEKGDSFKKLKTTGKWIEVQNAKGDKKGWVAGWHTS 103
>gi|19704000|ref|NP_603562.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|256844959|ref|ZP_05550417.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_36A2]
gi|19714185|gb|AAL94861.1| hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|256718518|gb|EEU32073.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_36A2]
Length = 153
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 18/150 (12%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI------ 100
+ V K AN R V+ L + E W +
Sbjct: 3 SSLSALAVRYVVDTKDGYANLREEANSKSKVI-KKLKNNHEMVFWHEKGEWFCVGAEPDD 61
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ D T G+I++S + + ++ Y N+ + S +A+++ G L+T
Sbjct: 62 KYSDMTDGYIHRSQIK-----LHPKTYTISSKDGYANVRNEAAANSHSIAELKNGTLVTK 116
Query: 161 RECSGEW--CFGYNLDTE----GWIKKQKI 184
E GEW + D G++ K ++
Sbjct: 117 FEEKGEWWGIEFDSEDGTPFDYGYVHKSQL 146
>gi|269967427|ref|ZP_06181487.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269828015|gb|EEZ82289.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 241
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 50/148 (33%), Gaps = 11/148 (7%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+P + ++ + + +L R+++ GP
Sbjct: 20 GSNHSVPTLSPRKIVKGFTVKKLIITVLFTLLAAPAALAAD--RYIS-DDLFTFMHSGPN 76
Query: 73 IMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIV----SPW 126
Y ++ + + G V+++K + + Q+RD G GW+ ++ + S +
Sbjct: 77 NTYRIIGS-VNAGSKVQLIKTNRDTGYTQVRDDRGRTGWVQSKFVTNQESMAIRLPRIEK 135
Query: 127 NRKTNNPIYINLYKKPDI-QSIIVAKVE 153
N + D ++ +V +E
Sbjct: 136 ELAEVKEQLANARQTSDAEKAGLVTSLE 163
>gi|255068581|ref|ZP_05320436.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
gi|255047173|gb|EET42637.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
Length = 220
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYNLD--TEGWIKKQKI 184
K+ + +NL +PD + I+ +++ ++ ++ +W D T+G++ K ++
Sbjct: 158 KSTDSHKVNLRSQPDAHADIIKRLDDNAIVEKLKTVRKDWYLVQLKDTATQGYVHKSQL 216
>gi|332708122|ref|ZP_08428116.1| hypothetical protein LYNGBM3L_05500 [Lyngbya majuscula 3L]
gi|332353153|gb|EGJ32699.1| hypothetical protein LYNGBM3L_05500 [Lyngbya majuscula 3L]
Length = 118
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 36/105 (34%), Gaps = 16/105 (15%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS----RANSRIGPGIMYTVVC--- 79
IF LA + + + F + T+ AS R R GPG Y +
Sbjct: 5 IFLLATAAAVTVPTTEAFAQHTFPSERSHCLATLTASNPDSRITLRSGPGTNYRSLGYGL 64
Query: 80 ----TYLTKGLPVE---VVKEYE-NWRQIRDF-DGTIGWINKSLL 115
Y+ G P E + + W ++ G GWI LL
Sbjct: 65 VGDNVYVLTGTPPEPDYKIDSFGYGWHRVGFPVSGAKGWIRDDLL 109
>gi|329929478|ref|ZP_08283212.1| NlpC/P60 family protein [Paenibacillus sp. HGF5]
gi|328936366|gb|EGG32813.1| NlpC/P60 family protein [Paenibacillus sp. HGF5]
Length = 268
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ +S R P VV + KG V+++ + +W +I+ DG G+ + ++
Sbjct: 49 VASSNVYMRNKPSTSGKVV-DRVHKGERVQILAKSSSWYKIKTSDGKQGYASSKYINQ 105
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
SA K + + KP +V +V G + I S W + +G+
Sbjct: 38 SAASVQSATKGVASSNVYMRNKPSTSGKVVDRVHKGERVQILAKSSSWYKIKTSDGKQGY 97
Query: 179 IKKQKI 184
+ I
Sbjct: 98 ASSKYI 103
>gi|149201651|ref|ZP_01878625.1| SH3, type 3 [Roseovarius sp. TM1035]
gi|149144699|gb|EDM32728.1| SH3, type 3 [Roseovarius sp. TM1035]
Length = 206
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN- 96
P+ A++ + E R V+ + N R GPG + V L +G V V+++
Sbjct: 125 PVQAVALDGETLAAASDLRRVS--GNSVNLRTGPGTGFGRV-ASLKRGTEVIVLRDPGEG 181
Query: 97 WRQIRDFD-GTIGWINKSLLS 116
W ++R + G IGW+ ++LL+
Sbjct: 182 WIKLRVVETGRIGWMAETLLT 202
>gi|158423402|ref|YP_001524694.1| hypothetical protein AZC_1778 [Azorhizobium caulinodans ORS 571]
gi|158330291|dbj|BAF87776.1| putative uncharacterized protein [Azorhizobium caulinodans ORS 571]
Length = 274
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS---GKR 119
N R GP Y V + G PVE+V N W + + GW+ L R
Sbjct: 42 VNMRAGPDTAYPRVTV-IPPGQPVEIVGCLYNQSWCDVI-WGRARGWVYGEYLGFAYQGR 99
Query: 120 SAIVSPWNRKTNNPI 134
+ +V + P+
Sbjct: 100 TVLVPEYAPVIGIPV 114
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+N+ PD V + PG + I C + WC GW+ + +
Sbjct: 42 VNMRAGPDTAYPRVTVIPPGQPVEIVGCLYNQSWCDVIWGRARGWVYGEYL 92
>gi|114764504|ref|ZP_01443729.1| hypothetical protein 1100011001295_R2601_11484 [Pelagibaca
bermudensis HTCC2601]
gi|114543071|gb|EAU46090.1| hypothetical protein R2601_11484 [Roseovarius sp. HTCC2601]
Length = 209
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTI-GWINKSLLSG 117
+ + N R GPG Y+VV L +G V V+ + W +++ + GW++ L
Sbjct: 149 VTGNVVNVRNGPGTGYSVV-NQLRRGDEVAVLTDPGEGWVKLQAIETKRIGWMSARFLRA 207
>gi|325982813|ref|YP_004295215.1| SH3 type 3 domain-containing protein [Nitrosomonas sp. AL212]
gi|325532332|gb|ADZ27053.1| SH3 type 3 domain protein [Nitrosomonas sp. AL212]
Length = 304
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K + S + + +N+ P+ + I+ ++ ++ G W
Sbjct: 224 KKTVDDNNSFFEFNTPIQLHTKTNVNIRTAPNASAKIITLLKKDTKVSANASLGSWLRVQ 283
Query: 172 NLDTEGWI 179
+ +GW+
Sbjct: 284 HDQNQGWV 291
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P ++ T L K V +W +++ D GW+ + L +
Sbjct: 244 TKTNVNIRTAPNASAKII-TLLKKDTKVSANASLGSWLRVQ-HDQNQGWVFNTGLEAR 299
>gi|60680183|ref|YP_210327.1| hypothetical protein BF0620 [Bacteroides fragilis NCTC 9343]
gi|60491617|emb|CAH06369.1| hypothetical protein BF0620 [Bacteroides fragilis NCTC 9343]
Length = 352
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 28 EVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYI 83
>gi|254501210|ref|ZP_05113361.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222437281|gb|EEE43960.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 348
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+S +NL I+ V G ++ +C WC + G++ ++
Sbjct: 285 ISNGETTGTITASVNLRATGTKNGKIIGIVPEGSEVSFNDCDKWWCEVVHDGKTGFVGQK 344
Query: 183 KI 184
+
Sbjct: 345 FV 346
>gi|218135122|ref|ZP_03463926.1| hypothetical protein BACPEC_03027 [Bacteroides pectinophilus ATCC
43243]
gi|217990507|gb|EEC56518.1| hypothetical protein BACPEC_03027 [Bacteroides pectinophilus ATCC
43243]
Length = 403
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + Y+ + ++PD S + K+ + + E W + + G++
Sbjct: 73 IFKGKAVATDTDYLAVMQEPDDDSEVAGKLFEYNIADVIEQDNGWTKITSGNLTGYVPTD 132
Query: 183 KI 184
+
Sbjct: 133 AL 134
>gi|229085204|ref|ZP_04217448.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-44]
gi|228698114|gb|EEL50855.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-44]
Length = 336
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 9/98 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I+ N R GP +V+ L V +E W + G WI S +
Sbjct: 209 IRGKNVNLRRGPSTSSSVI-RQLNSPESYVVYQENNGWLDL----GAGQWIYNDPSYIDY 263
Query: 118 KRSAIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ SP +NL + P S ++ ++
Sbjct: 264 VKYGNSDGSPIGVANIRGKNVNLRRGPSTSSSVMRQLN 301
>gi|167946808|ref|ZP_02533882.1| Sel1 domain protein repeat-containing protein [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 173
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLL 115
+K RAN R GPG +V T VE+ + NW I + D GWI L
Sbjct: 113 VKVKRANLRAGPGTGNEIVETVTEGSELVEI-GHHGNWSYIINPDTKKRGWIADWLT 168
>gi|16331927|ref|NP_442655.1| protein kinase [Synechocystis sp. PCC 6803]
gi|1730583|sp|P54735|SPKD_SYNY3 RecName: Full=Serine/threonine-protein kinase D
gi|1006577|dbj|BAA10726.1| eukaryotic protein kinase [Synechocystis sp. PCC 6803]
gi|11022721|dbj|BAB17036.1| Ser/Thr protein kinase SpkD [Synechocystis sp. PCC 6803]
Length = 505
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 66 NSRIGPGIMYTVVCT-YLTKGLPVEVVKEYEN-----WRQIRDFD-GTIGWINKSLLS 116
N R GPG Y V+ Y +GL +++ + W ++ + G+ GWI L++
Sbjct: 449 NIRSGPGTDYGVITQGYTGEGL--DILDSSTDSSGHVWYKVYHYGSGSTGWIASQLVN 504
>gi|239629139|ref|ZP_04672170.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519285|gb|EEQ59151.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 330
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
IK + N R P ++ LT G V+ VK Y +W + +++G +++ L
Sbjct: 254 IKGNSVNVRKEPSTDSRIL-VQLTNGYEVDYVKRYSNDW-DVINYEGQEAYVSSRFL 308
>gi|332297664|ref|YP_004439586.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332180767|gb|AEE16455.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 101
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 11/69 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----------WRQIRDFDGTI 107
I SR R P + + Y+ KG V+++ + W + +GT
Sbjct: 32 AAINDSRVRVRSEPNLKCETL-DYVNKGDSVKILDRSTDKQQIGDMNDYWYNVELQNGTK 90
Query: 108 GWINKSLLS 116
GW+ + +
Sbjct: 91 GWVYGAYID 99
>gi|304385082|ref|ZP_07367428.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici DSM
20284]
gi|304329276|gb|EFL96496.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici DSM
20284]
Length = 295
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+N+L ++ F +A IL + +F + + +V + + R P V + L
Sbjct: 18 RNTLQIIISAGFLIAAILVIVP---LFSAESV--YVGL--DQVAIRNSPNRTAKKVGS-L 69
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ V VV + +W +IR D GWI + +
Sbjct: 70 DQYQKVTVVSKSNDWYRIRFDDTKTGWIPSWITNRT 105
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIK 180
+ + P+ + V ++ +T+ S +W DT GWI
Sbjct: 51 DQVAIRNSPNRTAKKVGSLDQYQKVTVVSKSNDWYRIRFDDTKTGWIP 98
>gi|270291330|ref|ZP_06197552.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici 7_4]
gi|270280176|gb|EFA26012.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici 7_4]
Length = 289
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+N+L ++ F +A IL + +F + + +V + + R P V + L
Sbjct: 12 RNTLQIIISAGFLIAAILVIVP---LFSAESV--YVGL--DQVAIRNSPNRTAKKVGS-L 63
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ V VV + +W +IR D GWI + +
Sbjct: 64 DQYQKVTVVSKSNDWYRIRFDDTKTGWIPSWITNRT 99
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIK 180
+ + P+ + V ++ +T+ S +W DT GWI
Sbjct: 45 DQVAIRNSPNRTAKKVGSLDQYQKVTVVSKSNDWYRIRFDDTKTGWIP 92
>gi|16801370|ref|NP_471638.1| hypothetical protein lin2306 [Listeria innocua Clip11262]
gi|16414818|emb|CAC97534.1| lin2306 [Listeria innocua Clip11262]
Length = 375
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D +IGWIN + ++ + K +Y P +
Sbjct: 257 KAVTEKGTWYQLQDQGKSIGWINSNTVTIFYTPKNETNMKLDKYVTDSDQKIYAYPVEDN 316
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 317 SKVVADLNDYLGQELDIDRRADVKNEYWYRIKSDDGKIIGW 357
>gi|317121292|ref|YP_004101295.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
gi|315591272|gb|ADU50568.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 129
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F I N R P + T + +G PV V+ W +++ G G++ K +
Sbjct: 66 FGVITHDDVNVRQRPSGKSQTL-TRVGRGTPVIVMAFDGFWAEVQLVGGATGYVFKDYV 123
>gi|261884013|ref|ZP_06008052.1| hypothetical protein CfetvA_01836 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 324
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 57 FVTIKASRANSRIGPGIM----YTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWIN 111
++ I AN R P + Y++ + + L E E W ++ +G GWI+
Sbjct: 256 YLKINTEYANVRSEPSLDSSVVYSIDQSTHLEYLNEESTDLESRTWLLVKLPNGNEGWIS 315
Query: 112 KSLL 115
+
Sbjct: 316 SKIT 319
>gi|229014955|ref|ZP_04172043.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228746367|gb|EEL96282.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 292
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
I N R G G Y++V +KG V V +E W ++ GT W+
Sbjct: 234 AEINGIGVNIRSGAGSNYSIV-RKASKGEKVTVYEEKNGWLRM----GTGQWVYY 283
>gi|126727715|ref|ZP_01743546.1| hypothetical protein RB2150_00170 [Rhodobacterales bacterium
HTCC2150]
gi|126702971|gb|EBA02073.1| hypothetical protein RB2150_00170 [Rhodobacterales bacterium
HTCC2150]
Length = 178
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE------NWRQIRDFDGTIGW 109
N R GP Y ++ + L G PV ++++ + NW +I +G +G+
Sbjct: 7 NVRSGPSTDYPIIGS-LKNGDPVVLLRKKKPANDGFNWFKIVYGNGQVGY 55
>gi|225621510|ref|YP_002722769.1| aerotolerance-related exported protein BatE [Brachyspira
hyodysenteriae WA1]
gi|225216331|gb|ACN85065.1| aerotolerance-related exported protein BatE containing TPR domain
[Brachyspira hyodysenteriae WA1]
Length = 223
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
NLY +S IV+++ G L + E W + + +GWI K
Sbjct: 171 DNANLYSGSSTKSSIVSQISEGEKLKVLEEYTNWYYVK-GNFKGWISKSS 219
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
I AN G ++V +++G ++V++EY NW ++ GWI+KS
Sbjct: 168 ITIDNANLYSGSSTKSSIVSQ-ISEGEKLKVLEEYTNWYYVK--GNFKGWISKS 218
>gi|253563985|ref|ZP_04841442.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251947761|gb|EES88043.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 391
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++N+ + I+ + G ++ + GEW G++ I
Sbjct: 67 EVTANTFLNIRSHGSTNAPIIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYI 122
>gi|292490480|ref|YP_003525919.1| lipopolysaccharide transport periplasmic protein LptA
[Nitrosococcus halophilus Nc4]
gi|291579075|gb|ADE13532.1| lipopolysaccharide transport periplasmic protein LptA
[Nitrosococcus halophilus Nc4]
Length = 275
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGT--IGWINK---SLLSG 117
N R GP Y+ L P+ +++ W I +G GW++ LL+G
Sbjct: 216 NLRTGPDTDYSKA-ALLPPRTPITILERQAEWLHISTLAEGESIEGWVHADFIRLLNG 272
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY----NLDTEGWIK 180
P ++NL PD A + P +TI E EW EGW+
Sbjct: 204 PELAHGRTTTWLNLRTGPDTDYSKAALLPPRTPITILERQAEWLHISTLAEGESIEGWVH 263
Query: 181 KQKI 184
I
Sbjct: 264 ADFI 267
>gi|84385566|ref|ZP_00988597.1| hypothetical protein V12B01_25569 [Vibrio splendidus 12B01]
gi|84379546|gb|EAP96398.1| hypothetical protein V12B01_25569 [Vibrio splendidus 12B01]
Length = 167
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 6/56 (10%), Positives = 22/56 (39%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T + + + + S ++ ++ G + + + + W +GW+ + +
Sbjct: 107 STVEAESLRVRAEATLNSKVINQLVAGDEVVVLKTNSSWALVEGNGVKGWVASEYL 162
>gi|260427743|ref|ZP_05781722.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422235|gb|EEX15486.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 221
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLS 116
N R GPG Y + + VEV E W ++ +G GW + L+
Sbjct: 32 ELNLRSGPGPEYQIEGV-IPGDAEVEVTGCLEEAEWCEVT-HEGVSGWAYSAYLT 84
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P + I + + + C EWC + GW +
Sbjct: 33 LNLRSGPGPEYQIEGVIPGDAEVEVTGCLEEAEWCEVTHEGVSGWAYSAYL 83
>gi|257463422|ref|ZP_05627817.1| hypothetical protein FuD12_06178 [Fusobacterium sp. D12]
Length = 400
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKG-LPV--EVVKEYENWRQIRDFDGTIGWINKS 113
+V + + AN R PG+ ++ Y LP+ ++ + W ++R G G+I S
Sbjct: 70 YVFVSSRTANIRDYPGMEGNIIEKYSYNDKLPLLEKIYVKGNYWYKVRTPKGNEGYIAAS 129
Query: 114 LLSGKRSA 121
+S KR+
Sbjct: 130 -VSQKRNF 136
>gi|212697202|ref|ZP_03305330.1| hypothetical protein ANHYDRO_01770 [Anaerococcus hydrogenalis DSM
7454]
gi|212675977|gb|EEB35584.1| hypothetical protein ANHYDRO_01770 [Anaerococcus hydrogenalis DSM
7454]
Length = 483
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 35/173 (20%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E + E + + + A N R + +V LTKG V + W +I +
Sbjct: 146 TEEVKSQENQAISYTGWVNADALNIRSDANLNSNIVGA-LTKGDKVSGTLQ-NGWLKI-N 202
Query: 103 FDGTIGWINKSLLSGK------------------------RSAIVSPWNRKTNNP----- 133
+G + +I+ LS R+A V N+ +
Sbjct: 203 NNGKVSYISADFLSNTEVKKPVVEKKEESKKETTNQQAQNRTANVKQENKVQSQAYTGWV 262
Query: 134 --IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ G ++ + + W G+I +
Sbjct: 263 NTAALNVRNGASTSNNVIGNYTMGDKVS-GQLANGWLKVNYNGQTGYISADLL 314
>gi|229167092|ref|ZP_04294835.1| Cell wall hydrolase/autolysin [Bacillus cereus AH621]
gi|228616326|gb|EEK73408.1| Cell wall hydrolase/autolysin [Bacillus cereus AH621]
Length = 333
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 9/93 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS--GKRS 120
N R GP +V+ L V +E W + G W+ S ++ +
Sbjct: 211 VNLRSGPSTSSSVI-RQLNSPESYVVYQESNGWLDL----GNGQWVYNDPSYINFVKASN 265
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ S +NL P S ++ K+
Sbjct: 266 SDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLN 298
>gi|325848649|ref|ZP_08170227.1| NlpC/P60 family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480651|gb|EGC83711.1| NlpC/P60 family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 354
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 23/169 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR-IGPGIMYT 76
M K + ++ + + F +H K + + N R G +
Sbjct: 1 MRKNKKIIILLSGILAFQFFAPKTTAHAKGLIINYDI-------TEGVNIRESGSSSNNS 53
Query: 77 VVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
P E+ +E +W +I DF G++ GK V + +
Sbjct: 54 K--IIGGIDYPDVYEIKEEDNDWYKI-DFKDKEGYV------GKSWFYVLDDVKTLDKG- 103
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQ 182
+Y+K D +S V+ + L + ++ D G+IK
Sbjct: 104 --KIYEKADEKSKEVSDFKKDEKLILVNFADKDFIKVKKGDKTGFIKID 150
>gi|42784018|ref|NP_981265.1| S-layer-like domain-containing protein [Bacillus cereus ATCC 10987]
gi|42739948|gb|AAS43873.1| S-layer homology domain protein [Bacillus cereus ATCC 10987]
Length = 939
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 658 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 703
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K P + E G W + W+ + I
Sbjct: 704 VSGKYAPQTVEVYGEREGGWIQIQTSNGLKWVNEGNI 740
>gi|319407010|emb|CBI80647.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 218
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEG 177
++ + L P + A V G + I C + WC + +T G
Sbjct: 25 TSDAAAGTVAKIEKGKAILRAGPAATYKVTAVVPTGAKVQINGCLADKVWCLLQHNETVG 84
Query: 178 WIKKQ 182
W
Sbjct: 85 WASAN 89
>gi|237795160|ref|YP_002862712.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
gi|229263515|gb|ACQ54548.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
Length = 253
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ GWIN L GK I +P +N+ +K S I+ + G + +
Sbjct: 182 NNNNGWIN---LDGKTGTICTPSG--------VNIREKKSTSSRILGALPNGAKINLYRK 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 231 EGDWIHIYYPPHGGYVYGKYI 251
>gi|29378407|gb|AAO83905.1| invasion associated protein p60 [Listeria seeligeri]
Length = 524
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 184
>gi|95930977|ref|ZP_01313706.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95132986|gb|EAT14656.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 225
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGWIN 111
R+V+ R G G Y V+ K LP VEV++E + +++ DGT G++
Sbjct: 25 RYVS-DRLVITVREGMGNQYRVI-----KTLPTDSAVEVLEEQGRYLRVQLKDGTEGYVL 78
Query: 112 KSLLSGK--RSAIVSPWNRKTNN--PIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
K +S ++ +++ + N + + + S A++E ++ T RE
Sbjct: 79 KQYISRTVPKTTVIAKLKQDVANLEKKLADRHGSVNTLSESNAQLEESLIQTRRE 133
>gi|226354881|ref|YP_002784621.1| SH3 domain and Excalibur calcium-binding domain-containing protein
[Deinococcus deserti VCD115]
gi|226316871|gb|ACO44867.1| putative SH3 domain and Excalibur calcium-binding domain protein,
precursor [Deinococcus deserti VCD115]
Length = 132
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + P + ++ V LLT+ C GEWC G+I + +
Sbjct: 25 TTTTVNLRRLPAMSGAVIGVVPANTLLTVA-CRGEWCRTTYQGRGGYIARTLL 76
>gi|295090047|emb|CBK76154.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Clostridium cf. saccharolyticum K10]
Length = 235
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ + + P A + E + + VT++A + G VV + +G
Sbjct: 12 MFCVCSAVCLMNPAAARADEAQTGTDEGSA-VVTVEAQELSLYSGKSQESEVVGQAV-QG 69
Query: 86 LPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
EVV+E + W +I DGT G+ LL+ +SA++S + I
Sbjct: 70 DTYEVVEESSDGWVKICSEDGTEGY----LLADGKSAVISEDGQAAEEESDIR 118
>gi|320527466|ref|ZP_08028647.1| NlpC/P60 family protein [Solobacterium moorei F0204]
gi|320132179|gb|EFW24728.1| NlpC/P60 family protein [Solobacterium moorei F0204]
Length = 531
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R N R P +++ T L PV W++I +G +GW+ + ++
Sbjct: 350 RLNVRTAPSTSSSIITT-LNVNDPVYCTDTVSNGWQEIV-INGQVGWVYAQYIQSEQYVA 407
Query: 123 VSPW 126
+P
Sbjct: 408 PTPQ 411
>gi|66968494|gb|AAY59626.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968496|gb|AAY59627.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968498|gb|AAY59628.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 184
>gi|29378405|gb|AAO83904.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 184
>gi|325286217|ref|YP_004262007.1| NLP/P60 protein [Cellulophaga lytica DSM 7489]
gi|324321671|gb|ADY29136.1| NLP/P60 protein [Cellulophaga lytica DSM 7489]
Length = 401
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ +K S AN R G + T G PV+V K +W I+ D + W+
Sbjct: 109 WAIVKISVANLRSKAGHSQELA-TQAILGTPVKVYKNDGDWYLIQTPDNYLAWV 161
>gi|320144020|gb|EFW35789.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 291
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 54 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 100
>gi|301161708|emb|CBW21248.1| hypothetical protein BF638R_0663 [Bacteroides fragilis 638R]
Length = 352
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++N+ + I+ + G ++ + GEW G++ I
Sbjct: 28 EVTANTFLNIRSHGSTNAPIIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYI 83
>gi|258450542|ref|ZP_05698604.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5948]
gi|257861700|gb|EEV84499.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5948]
Length = 291
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 54 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 100
>gi|258448789|ref|ZP_05696901.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6224]
gi|257858067|gb|EEV80956.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6224]
Length = 291
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 54 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 100
>gi|15924622|ref|NP_372156.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927212|ref|NP_374745.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus N315]
gi|21283311|ref|NP_646399.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MW2]
gi|49486465|ref|YP_043686.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650513|ref|YP_186526.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus COL]
gi|82751230|ref|YP_416971.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus RF122]
gi|87160775|ref|YP_494283.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195443|ref|YP_500247.1| hypothetical protein SAOUHSC_01739 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268112|ref|YP_001247055.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH9]
gi|150394180|ref|YP_001316855.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH1]
gi|151221746|ref|YP_001332568.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979950|ref|YP_001442209.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253317216|ref|ZP_04840429.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732288|ref|ZP_04866453.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253733117|ref|ZP_04867282.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257425756|ref|ZP_05602180.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428416|ref|ZP_05604814.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257431054|ref|ZP_05607433.1| cell wall amidase lytH [Staphylococcus aureus subsp. aureus 68-397]
gi|257433740|ref|ZP_05610098.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436655|ref|ZP_05612699.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M876]
gi|258424057|ref|ZP_05686939.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9635]
gi|258438205|ref|ZP_05689489.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9299]
gi|258443668|ref|ZP_05692007.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A8115]
gi|258446875|ref|ZP_05695029.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6300]
gi|258453607|ref|ZP_05701585.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5937]
gi|262051282|ref|ZP_06023506.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus 930918-3]
gi|269203257|ref|YP_003282526.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED98]
gi|282893136|ref|ZP_06301370.1| LytH protein/N-acetylmuramoyl-L-alanine amidase domain
[Staphylococcus aureus A8117]
gi|282904212|ref|ZP_06312100.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282906038|ref|ZP_06313893.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908951|ref|ZP_06316769.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911268|ref|ZP_06319070.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914437|ref|ZP_06322223.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282916900|ref|ZP_06324658.1| LytH protein involved in methicillin resistance [Staphylococcus
aureus subsp. aureus D139]
gi|282919406|ref|ZP_06327141.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C427]
gi|282920181|ref|ZP_06327906.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A9765]
gi|282924730|ref|ZP_06332398.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C101]
gi|282928267|ref|ZP_06335872.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A10102]
gi|283770706|ref|ZP_06343598.1| N-acetylmuramoyl-L-alanine amidase domain-containing protein LytH
involved in methicillin resistance [Staphylococcus
aureus subsp. aureus H19]
gi|283958392|ref|ZP_06375843.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|284024688|ref|ZP_06379086.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 132]
gi|293503510|ref|ZP_06667357.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293510528|ref|ZP_06669234.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|293531069|ref|ZP_06671751.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|294848661|ref|ZP_06789407.1| LytH protein [Staphylococcus aureus A9754]
gi|295406753|ref|ZP_06816558.1| LytH protein [Staphylococcus aureus A8819]
gi|296275917|ref|ZP_06858424.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MR1]
gi|297207648|ref|ZP_06924083.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297245664|ref|ZP_06929529.1| LytH protein [Staphylococcus aureus A8796]
gi|297590825|ref|ZP_06949463.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MN8]
gi|300911730|ref|ZP_07129173.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380771|ref|ZP_07363439.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|75341177|sp|O32421|LYTH_STAAU RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81649197|sp|Q6G8T7|LYTH_STAAS RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81694343|sp|Q5HFD1|LYTH_STAAC RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81704372|sp|Q7A0Q6|LYTH_STAAW RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81704838|sp|Q7A2R2|LYTH_STAAM RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81705576|sp|Q7A588|LYTH_STAAN RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279035|sp|Q2FG95|LYTH_STAA3 RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279036|sp|Q2FXU3|LYTH_STAA8 RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279037|sp|Q2YT98|LYTH_STAAB RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|2580435|dbj|BAA23140.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus]
gi|13701430|dbj|BAB42724.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus N315]
gi|14247404|dbj|BAB57794.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204751|dbj|BAB95447.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MW2]
gi|49244908|emb|CAG43369.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57284699|gb|AAW36793.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus COL]
gi|82656761|emb|CAI81190.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus RF122]
gi|87126749|gb|ABD21263.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203001|gb|ABD30811.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741181|gb|ABQ49479.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH9]
gi|149946632|gb|ABR52568.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH1]
gi|150374546|dbj|BAF67806.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156722085|dbj|BAF78502.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253724077|gb|EES92806.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253728873|gb|EES97602.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257271450|gb|EEV03596.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275257|gb|EEV06744.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278257|gb|EEV08899.1| cell wall amidase lytH [Staphylococcus aureus subsp. aureus 68-397]
gi|257281833|gb|EEV11970.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284006|gb|EEV14129.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M876]
gi|257845678|gb|EEV69710.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9635]
gi|257848249|gb|EEV72240.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9299]
gi|257851074|gb|EEV75017.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A8115]
gi|257854450|gb|EEV77399.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6300]
gi|257864338|gb|EEV87088.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5937]
gi|259160919|gb|EEW45939.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus 930918-3]
gi|262075547|gb|ACY11520.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED98]
gi|282313565|gb|EFB43960.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C101]
gi|282317216|gb|EFB47590.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C427]
gi|282319387|gb|EFB49739.1| LytH protein involved in methicillin resistance [Staphylococcus
aureus subsp. aureus D139]
gi|282321618|gb|EFB51943.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282324963|gb|EFB55273.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327215|gb|EFB57510.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331330|gb|EFB60844.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590074|gb|EFB95156.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A10102]
gi|282594529|gb|EFB99514.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A9765]
gi|282595830|gb|EFC00794.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282764454|gb|EFC04580.1| LytH protein/N-acetylmuramoyl-L-alanine amidase domain
[Staphylococcus aureus A8117]
gi|283460853|gb|EFC07943.1| N-acetylmuramoyl-L-alanine amidase domain-containing protein LytH
involved in methicillin resistance [Staphylococcus
aureus subsp. aureus H19]
gi|283470908|emb|CAQ50119.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ST398]
gi|283790541|gb|EFC29358.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|285817314|gb|ADC37801.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus aureus 04-02981]
gi|290920337|gb|EFD97403.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|291095176|gb|EFE25441.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291466892|gb|EFF09412.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|294824687|gb|EFG41110.1| LytH protein [Staphylococcus aureus A9754]
gi|294968500|gb|EFG44524.1| LytH protein [Staphylococcus aureus A8819]
gi|296887665|gb|EFH26563.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297177315|gb|EFH36567.1| LytH protein [Staphylococcus aureus A8796]
gi|297575711|gb|EFH94427.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MN8]
gi|298694911|gb|ADI98133.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED133]
gi|300885976|gb|EFK81178.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH70]
gi|302333305|gb|ADL23498.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus JKD6159]
gi|304340708|gb|EFM06640.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312437901|gb|ADQ76972.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH60]
gi|312830018|emb|CBX34860.1| N-acetylmuramoyl-L-alanine amidase family protein [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315129916|gb|EFT85906.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS03]
gi|315195534|gb|EFU25921.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS00]
gi|315198668|gb|EFU28996.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140481|gb|EFW32335.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|323440815|gb|EGA98524.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus O11]
gi|323442836|gb|EGB00461.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus O46]
gi|329727088|gb|EGG63544.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21172]
gi|329728406|gb|EGG64843.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21189]
gi|329733215|gb|EGG69552.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21193]
Length = 291
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 54 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 100
>gi|288554181|ref|YP_003426116.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudofirmus OF4]
gi|288545341|gb|ADC49224.1| N-acetylmuramoyl-L-alanine amidase (major autolysin),
LytC/CwlB-like protein [Bacillus pseudofirmus OF4]
Length = 571
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+A N R GP + + LT G VEV + W +I F+G +++ L
Sbjct: 229 RADTLNVRSGPDTSHASLGR-LTSGQTVEVHSFDDRWAKIT-FNGRDAYVHSYYLD 282
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 21/61 (34%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +++ +P Q+ + ++ + I W + +G++ +
Sbjct: 26 ASSKEGVVTATSLHVRAEPSSQANSIGSLKVNDKVVILRSVPSWYEITYGNQKGYVHQDY 85
Query: 184 I 184
I
Sbjct: 86 I 86
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 5/52 (9%), Positives = 15/52 (28%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+N+ PD + ++ G + + W + ++
Sbjct: 226 TVARADTLNVRSGPDTSHASLGRLTSGQTVEVHSFDDRWAKITFNGRDAYVH 277
>gi|66968490|gb|AAY59624.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968492|gb|AAY59625.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 140
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 141 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 184
>gi|313639231|gb|EFS04163.1| protein p60 [Listeria seeligeri FSL S4-171]
Length = 523
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 80 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 138
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 139 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 182
>gi|251777945|ref|ZP_04820865.1| SH3, type 3 domain protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082260|gb|EES48150.1| putative phage protein XkdP [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 229
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 24/59 (40%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ P ++ I+ + G ++T G+W Y D G++ I
Sbjct: 168 GDKAKVTASALNVRSGPGTENDIIGTLYKGQIVTAYRVEGQWLHTYYGDHGGYVHMDYI 226
>gi|253699992|ref|YP_003021181.1| SH3 type 3 domain protein [Geobacter sp. M21]
gi|251774842|gb|ACT17423.1| SH3 type 3 domain protein [Geobacter sp. M21]
Length = 158
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GWI 179
T + L K P ++ +VA ++ +T +CSG W + + GW
Sbjct: 31 TVTAPEMRLRKGPSKKAKVVAILKRDTKVTAEQCSGGWVKVSTQNGKLNGYIGGWA 86
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLSG 117
T+ A R GP VV L + V + W ++ +G + G+I LS
Sbjct: 31 TVTAPEMRLRKGPSKKAKVV-AILKRDTKVTAEQCSGGWVKVSTQNGKLNGYIGGWALSA 89
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + + + + ++ S
Sbjct: 90 APTQVAEAPATQIADTAPSTIAAQSEVPS 118
>gi|188585704|ref|YP_001917249.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350391|gb|ACB84661.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 657
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 18/75 (24%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK--------EYENWRQ---------I 100
+ I A N R GPG+ Y + T + +G +++ YE W + +
Sbjct: 287 IVIDADNLNVRTGPGLDYDSI-TQVDEGEDYDIITMAAMENHPTYEEWFKIDLDKRNLDV 345
Query: 101 RDFDGTIGWINKSLL 115
D + GW+ +
Sbjct: 346 EDRNEAKGWVAAEYV 360
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 57 FVTIKASRANSRIGPGIMYT-VVCTYLTKGLPV------EVVKEYENWRQI--RDFDGTI 107
IKAS N R GPG+ Y+ V P+ E +EY++W +I D +
Sbjct: 173 MAEIKASNLNVRTGPGMDYSVVDNLQAGDSFPILDKHHNENEEEYQDWLKIDLEDEQDDV 232
Query: 108 GWINKSLL 115
W++ +
Sbjct: 233 -WVSADFI 239
>gi|160935960|ref|ZP_02083334.1| hypothetical protein CLOBOL_00855 [Clostridium bolteae ATCC
BAA-613]
gi|158441202|gb|EDP18919.1| hypothetical protein CLOBOL_00855 [Clostridium bolteae ATCC
BAA-613]
Length = 331
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGK 118
IK S N R P ++ L G V VK Y+N W + ++DG +++ +
Sbjct: 255 IKGSSVNVRSEPSTSGRIL-VQLGSGTEVVYVKRYDNDWA-VINYDGQEAYVSSKYIEKV 312
Query: 119 RSAIVSPWNRKTNNPIYIN 137
+ + + N
Sbjct: 313 EPVASTGGETEGSEAQTAN 331
>gi|148560308|ref|YP_001258720.1| hypothetical protein BOV_0733 [Brucella ovis ATCC 25840]
gi|148371565|gb|ABQ61544.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 100
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 29 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
N R GPG Y V + G PV V W Q+ ++ GW + L+
Sbjct: 32 NVRTGPGTGYAAVGA-IPSGAPVNVRGCTSGYGWCQV-NYGNMFGWASSRYLA 82
>gi|302383459|ref|YP_003819282.1| SH3 type 3 domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194087|gb|ADL01659.1| SH3 type 3 domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 159
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+S R GPG Y + L+ G P V W QI GW+N + +S
Sbjct: 107 ASSNLRIRSGPGTNYRQAGS-LSAGQPFTAVGSQGEWVQI----AGGGWVNANYVS 157
>gi|284031047|ref|YP_003380978.1| NLP/P60 protein [Kribbella flavida DSM 17836]
gi|283810340|gb|ADB32179.1| NLP/P60 protein [Kribbella flavida DSM 17836]
Length = 290
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 12/109 (11%)
Query: 85 GLPVEVVKEYENWRQIR--------DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
G PV V E W +I D G GW+ + L S+ +P
Sbjct: 60 GEPVIVRSERNGWSEILAPWQPSSGDVLGYPGWVPSAHLGELPSSATAP---VAVTVPLA 116
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L +P + +A++ +L+ E + + + GW+ +
Sbjct: 117 TLTAEPGAGAGSLAELSFATVLSSVEHTDGYTRVALPDGSSGWLADDVL 165
>gi|91228367|ref|ZP_01262294.1| hypothetical protein V12G01_12350 [Vibrio alginolyticus 12G01]
gi|91188066|gb|EAS74371.1| hypothetical protein V12G01_12350 [Vibrio alginolyticus 12G01]
Length = 203
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V+++K + + Q+RD G GW+ ++ + S +
Sbjct: 33 MHSGPNNTYRIIGS-VNAGSKVQLIKTNRDTGYTQVRDDRGRTGWVQSKFVTNQESMAIR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDI-QSIIVAKVE 153
N + D ++ +V +E
Sbjct: 92 LPRIEKELAEVKEQLANARQTSDAEKAGLVTSLE 125
>gi|313617670|gb|EFR89955.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL S4-378]
Length = 367
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D +IGWIN + ++ + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKSIGWINSNAVTIFYTPKNETNMKLDKYVTDSDQKIYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 309 SKVVADLNDYLGQELDIDRRADVKNEYWYRIKSDDGKIIGW 349
>gi|269839431|ref|YP_003324123.1| hypothetical protein Tter_2406 [Thermobaculum terrenum ATCC
BAA-798]
gi|269791161|gb|ACZ43301.1| protein of unknown function DUF1058 [Thermobaculum terrenum ATCC
BAA-798]
Length = 75
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-------SGEWCFGYNLDTEGWIKKQKI 184
+ +++Y P +VA++ G ++ + + G W + G++ + +
Sbjct: 7 SGQPVDMYAGPGKHYRVVARIPNGSIVGVDKRSIWDLLEEGSWAYAEFKGVRGYVPGEAL 66
Query: 185 W 185
W
Sbjct: 67 W 67
>gi|327441374|dbj|BAK17739.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 658
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + S + +++ G L+ + SG W G+I K +
Sbjct: 411 GKATVDALQIRESASGSSRSLGQIKRGTLVEVHSVSGSWAKVAYNGINGYINKTYL 466
>gi|170718508|ref|YP_001783719.1| SH3 domain-containing protein [Haemophilus somnus 2336]
gi|168826637|gb|ACA32008.1| SH3 domain protein [Haemophilus somnus 2336]
Length = 203
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ L L L+ ++ + + K+ L F R G G + + T + G
Sbjct: 4 ITSLLVSALLLGFSLSNAYAETKYVKENLTTF---------MRRGAGDQFKISGT-IQAG 53
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
V V+ + + + IRD WI S L+ S+
Sbjct: 54 ESVTVLDKKDKYSLIRDKRNREAWILTSELTSTPSS 89
>gi|242373932|ref|ZP_04819506.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W1]
gi|242348356|gb|EES39958.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W1]
Length = 181
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG + V + W ++++ GT GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGDSFKKVDKKGKWIEVQNRAGTEKGWVAGW 100
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + G+W +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGDSFKKVDKKGKWIEVQNRAGTEKGWVA 98
>gi|49474556|ref|YP_032598.1| hypothetical protein BQ10180 [Bartonella quintana str. Toulouse]
gi|49240060|emb|CAF26486.1| hypothetical protein BQ10180 [Bartonella quintana str. Toulouse]
Length = 208
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
L P ++A V G + I C + WC GW + +
Sbjct: 43 LRTGPATAYKVIATVPTGAKVQIYGCLSNKAWCSLRYNGKVGWASARYL 91
>gi|227872138|ref|ZP_03990509.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase
[Oribacterium sinus F0268]
gi|227842030|gb|EEJ52289.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase
[Oribacterium sinus F0268]
Length = 508
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 58 VTIKASRANSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V+ N R P GI + G +++ E W +IR + G++ L
Sbjct: 246 VSKAQDYINIRSDPADKGIDNIIGKFPGYAGG--DILGEENGWLKIRSGE-ITGYVKSEL 302
Query: 115 LSGKRSA----IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ + A + T N +N+ P +S KV ++ W
Sbjct: 303 VAQGKEAEQLALAHAQVMATVNTDALNVRANPSTESNAWTKVTRDQRYSVVNQLDGWVQL 362
Query: 171 YNLDTE 176
+
Sbjct: 363 DLDSGD 368
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-----RDFDGTIG 108
T+ N R P T +T+ VV + + W Q+ D +G G
Sbjct: 320 MATVNTDALNVRANPSTESN-AWTKVTRDQRYSVVNQLDGWVQLDLDSGDDQEGDQG 375
>gi|221316937|ref|YP_002533081.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Q1]
gi|221243269|gb|ACM15977.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Q1]
Length = 352
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
I N R GP Y ++ L+KG +V + +W + G WI
Sbjct: 216 IDGYNVNLRSGPSTNYGII-RQLSKGESYQVWGKQGDWLNL----GGNQWIY 262
>gi|29378411|gb|AAO83907.1| invasion associated protein p60 [Listeria seeligeri]
Length = 501
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 68 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 126
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 127 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 170
>gi|332654367|ref|ZP_08420111.1| putative S-layer homology domain protein [Ruminococcaceae bacterium
D16]
gi|332517453|gb|EGJ47058.1| putative S-layer homology domain protein [Ruminococcaceae bacterium
D16]
Length = 919
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 15/116 (12%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSH-EKEIFEKKPLPRFVTIKASRANS 67
+ ++ + + S + I L + A + E E+ N
Sbjct: 809 IAAVSSDGTVTNVYTGSGTAQVTITATLGSLSASAVFTCESAEQVGQ----VTAEPSLNV 864
Query: 68 RIGPGIMYTVVC--TYLTKGLPVEVVKE-YENWRQIRDFDGTI----GWINKSLLS 116
R GPG Y+++ TY + V ++ + + W Q+ +G+ G+++ L+
Sbjct: 865 RSGPGTTYSIISSLTYGRR---VVILDDSTDGWYQVLFSNGSGQAVTGYVSADYLT 917
>gi|91216717|ref|ZP_01253682.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC
700755]
gi|91185186|gb|EAS71564.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC
700755]
Length = 255
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + F +AI F + + +L + + F I + + P V +
Sbjct: 161 KKRINFFIAILFLVFGVTSLLFGRFQNQFLGEQSFAIIFEDQVQVHVEPNSRSDVNFQ-M 219
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
KG V + ++ QI DG+ GW+ +L
Sbjct: 220 NKGSKVSTGSTFRDFTQIELSDGSKGWVKTLILKK 254
>gi|29378413|gb|AAO83908.1| invasion associated protein p60 [Listeria seeligeri]
Length = 503
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL-- 115
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 70 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLGN 128
Query: 116 --SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ SA T K Q+ A E +
Sbjct: 129 AVTSAPSATPEVKQETTTQAAPAQQTKTEVKQATPAATTEKEAV 172
>gi|313902033|ref|ZP_07835447.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313467700|gb|EFR63200.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 129
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F + N R P V+ + +G PV V+ W +++ G G++ K +
Sbjct: 66 FGVVTHDDVNVRQRPSGKSEVL-ARVGRGTPVIVMAFEGFWAEVQLVGGETGYVFKDYV 123
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ ++P +S ++A+V G + + G W G++ K +
Sbjct: 67 GVVTHDDVNVRQRPSGKSEVLARVGRGTPVIVMAFEGFWAEVQLVGGETGYVFKDYV 123
>gi|251811036|ref|ZP_04825509.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875944|ref|ZP_06284811.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
SK135]
gi|293366412|ref|ZP_06613090.1| family 3 N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|251805454|gb|EES58111.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294969|gb|EFA87496.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
SK135]
gi|291319446|gb|EFE59814.1| family 3 N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329735294|gb|EGG71586.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU045]
gi|329737350|gb|EGG73604.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU028]
Length = 291
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG + + W ++++ GT GW+
Sbjct: 54 LRTGPNAAYPVIYK-IEKGKSFKKIDRKGKWIEVQNHAGTEKGWVAGW 100
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K+E G + G+W + +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIEKGKSFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|261404684|ref|YP_003240925.1| NLP/P60 protein [Paenibacillus sp. Y412MC10]
gi|261281147|gb|ACX63118.1| NLP/P60 protein [Paenibacillus sp. Y412MC10]
Length = 268
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ +S R P VV + KG V+++ + +W +I+ DG G+ + ++
Sbjct: 49 VASSNVYMRNKPSTSGKVV-DRVHKGERVQILGKSSSWYKIKTSDGKQGYASSKYINQ 105
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
SA K + + KP +V +V G + I S W + +G+
Sbjct: 38 SAASVQSVTKGVASSNVYMRNKPSTSGKVVDRVHKGERVQILGKSSSWYKIKTSDGKQGY 97
Query: 179 IKKQKI 184
+ I
Sbjct: 98 ASSKYI 103
>gi|330504295|ref|YP_004381164.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918581|gb|AEB59412.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina NK-01]
Length = 218
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 56 RFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R+V+ N R GP Y +V T + G VE+++ ++ Q+R G WI
Sbjct: 40 RWVS---DSLNTYVRSGPTDGYRIVGTLV-SGEKVELLRTQGDYSQVRSESGNTVWIPSR 95
Query: 114 LL 115
L
Sbjct: 96 DL 97
>gi|153940753|ref|YP_001392291.1| endolysin [Clostridium botulinum F str. Langeland]
gi|152936649|gb|ABS42147.1| probable endolysin [Clostridium botulinum F str. Langeland]
gi|295320284|gb|ADG00662.1| probable endolysin [Clostridium botulinum F str. 230613]
Length = 259
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
WIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 DTAWIN---LDGKTGTICTPSG--------VNVRENKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSRYI 254
>gi|148380965|ref|YP_001255506.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|153931252|ref|YP_001385335.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 19397]
gi|153935980|ref|YP_001388743.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. Hall]
gi|148290449|emb|CAL84577.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|152927296|gb|ABS32796.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 19397]
gi|152931894|gb|ABS37393.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. Hall]
Length = 256
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
WIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 DTAWIN---LDGKTGTICTPSG--------VNVRENKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSRYI 254
>gi|319400958|gb|EFV89177.1| N-acetylmuramoyl-L-alanine amidase family protein [Staphylococcus
epidermidis FRI909]
Length = 291
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
R GP Y V+ + KG + + W ++++ GT GW+
Sbjct: 54 LRTGPNAAYPVIYK-IDKGESFKKIDRKGKWIEVQNHAGTEKGWVAGW 100
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
L P+ ++ K++ G + G+W + +GW+
Sbjct: 52 AELRTGPNAAYPVIYKIDKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|300724873|ref|YP_003714198.1| hypothetical protein XNC1_4087 [Xenorhabdus nematophila ATCC 19061]
gi|297631415|emb|CBJ92112.1| putative membrane protein [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ + + P+ + EK R+V+ A R GP I ++ + L G
Sbjct: 7 LFILLLGFTLPLSVHAEEK---------RYVS-DELSAYIRSGPSIQNRILGS-LNAGEE 55
Query: 88 VEVVKEY--ENWRQIRDFDGTIGWINKSLLSGKRSAIV-SPWNRKTNNPIYINLYKKPDI 144
V ++ + QI+D G WI S +S S P + + NL D
Sbjct: 56 VTLISPKSENGFIQIKDRKGRTSWILSSEISPIPSLRERIPTMEQQIKTLTDNLANIDDT 115
Query: 145 QSIIVAKVEPGV 156
+ A+++ V
Sbjct: 116 WNKRTAELQNKV 127
>gi|300776472|ref|ZP_07086330.1| peptidoglycan-binding LysM [Chryseobacterium gleum ATCC 35910]
gi|300501982|gb|EFK33122.1| peptidoglycan-binding LysM [Chryseobacterium gleum ATCC 35910]
Length = 139
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+N+ ++P ++ +V K G +T+ E W EG+ + +
Sbjct: 81 ATEESNLNIRQEPSTEAAVVGKASKGSSVTLIEQTSDDWWKVKTADGQEGYAYSRYL 137
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
V + S N R P VV +KG V ++++ ++W +++ DG G+ L
Sbjct: 80 VATEESNLNIRQEPSTEAAVVGK-ASKGSSVTLIEQTSDDWWKVKTADGQEGYAYSRYLR 138
Query: 117 G 117
Sbjct: 139 A 139
>gi|34541238|ref|NP_905717.1| batE protein [Porphyromonas gingivalis W83]
gi|34397554|gb|AAQ66616.1| batE protein [Porphyromonas gingivalis W83]
Length = 302
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
++++F + LA K F + + AS AN + P T + L +G+ V
Sbjct: 211 VSLFFCILFNLAAFRRKADFNDD---SYCIMMASVANVKSSPDENGTTLFE-LHEGVRVR 266
Query: 90 VVKEY-ENWRQIRDFDGTIGWINKSLLS 116
+ E + W I DG GW+ ++L+
Sbjct: 267 ITGEAIDGWYPIELADGKEGWLPATVLT 294
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGY-NLDTEGWIKKQKI 184
N+ PD + ++ GV + I E W EGW+ +
Sbjct: 240 ASVANVKSSPDENGTTLFELHEGVRVRITGEAIDGWYPIELADGKEGWLPATVL 293
>gi|313901709|ref|ZP_07835139.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313468027|gb|EFR63511.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 169
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY----NLDTEGWI 179
S T Y+N+ +P +S V + G + + E W EGW+
Sbjct: 103 STGQTATVTTQYLNVRAEPTQESTRVGTLAKGSTVQVLEEQNGWARVRYQANGRTYEGWV 162
Query: 180 KKQKI 184
+ +
Sbjct: 163 DARYL 167
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSL 114
T+ N R P T V T L KG V+V++E W ++R GW++
Sbjct: 108 ATVTTQYLNVRAEPTQESTRVGT-LAKGSTVQVLEEQNGWARVRYQANGRTYEGWVDARY 166
Query: 115 L 115
L
Sbjct: 167 L 167
>gi|82701770|ref|YP_411336.1| hypothetical protein Nmul_A0637 [Nitrosospira multiformis ATCC
25196]
gi|82409835|gb|ABB73944.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 287
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
++ +H+ + + P+P + + R PG+ ++ + + W Q
Sbjct: 203 VSDAHQVTVLFQMPIPLRASADSK---LREKPGLKAPILGVLKKESA-MTAEAYRGEWLQ 258
Query: 100 IRDFDGTIGWINKSLL 115
I DG GWI +L+
Sbjct: 259 ILTADGRSGWIFSTLV 274
>gi|89092024|ref|ZP_01164979.1| hypothetical protein MED92_07651 [Oceanospirillum sp. MED92]
gi|89083759|gb|EAR62976.1| hypothetical protein MED92_07651 [Oceanospirillum sp. MED92]
Length = 203
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT----IGWINK 112
+ + A + N R GPG + VV + G V + W +I + GWI
Sbjct: 24 YFNVNADKVNVRKGPGQNWKVV-AQVDAGQLVLETQRAGQWSEIFFVKNSNRKFQGWIFN 82
Query: 113 SLLS 116
+ L+
Sbjct: 83 AFLT 86
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-----YNLDTEGWI 179
N +N+ K P +VA+V+ G L+ + +G+W N +GWI
Sbjct: 26 NVNADKVNVRKGPGQNWKVVAQVDAGQLVLETQRAGQWSEIFFVKNSNRKFQGWI 80
>gi|89094051|ref|ZP_01166995.1| hypothetical protein MED92_02101 [Oceanospirillum sp. MED92]
gi|89081725|gb|EAR60953.1| hypothetical protein MED92_02101 [Oceanospirillum sp. MED92]
Length = 189
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
LA+ L ++ +K + GP Y ++ T + G PV
Sbjct: 4 LALISLLLFSVSAQAQKGHIADDAM----------VYVHNGPSNSYRII-TRIKSGTPVT 52
Query: 90 VVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIV 123
++K + + QI+ G IGW+ + + S V
Sbjct: 53 ILKRDASSKYVQIKMPKGRIGWVEPTAVDPGDSISV 88
>gi|47564237|ref|ZP_00235282.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
G9241]
gi|47558389|gb|EAL16712.1| surface-layer N-acetylmuramoyl-L-alanine amidase, [Bacillus cereus
G9241]
Length = 597
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G W+N T
Sbjct: 293 PSRTGYVVGKYPPQ--TVTVVEENSIWLKIRTSEGLQ-WMN-------PYLKEGEGKELT 342
Query: 131 NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P+ S I K P G + + W WI +
Sbjct: 343 YIPRTFFAYDSPNFSSKISGKYAPQGGIEELATGDDGWVQIRTDKGPKWINMSYL 397
>gi|254424689|ref|ZP_05038407.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
gi|196192178|gb|EDX87142.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
Length = 164
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 67 SRIGPGIMYTVVC--TYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
R GPG Y + Y V V+ E W I +G GW+
Sbjct: 115 LRSGPGTDYANIGGVDYEES---VTVLAEENGWLNILLSNGEEGWV 157
>gi|126461102|ref|YP_001042216.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126102766|gb|ABN75444.1| SH3, type 3 domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 186
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYE 95
AP L+ ++P + A N R GP Y VV + +G V V +
Sbjct: 101 APQPVLAATMVAETRQPAGEVRHVTADAVNVRSGPSTAYPVV-DRVLRGDAVLVDGPQEG 159
Query: 96 NWRQIR-DFDGTIGWINKSLLS 116
+W IR + DG G++ L+
Sbjct: 160 SWAPIRIEGDGVAGYMAARFLA 181
>gi|255006417|ref|ZP_05145018.2| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|295428207|ref|ZP_06820839.1| LytH protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295128565|gb|EFG58199.1| LytH protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|329314306|gb|AEB88719.1| Probable cell wall amidase lytH [Staphylococcus aureus subsp.
aureus T0131]
Length = 270
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D GWI
Sbjct: 33 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGW 79
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
L P+ ++ KVE G G+W + + +GWI
Sbjct: 31 AELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 77
>gi|300853574|ref|YP_003778558.1| putative phage related amidase [Clostridium ljungdahlii DSM 13528]
gi|300433689|gb|ADK13456.1| predicted phage related amidase [Clostridium ljungdahlii DSM 13528]
Length = 229
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +N+ ++ ++E G + + G W Y D G++ I
Sbjct: 173 GTVTASVLNVRSGAGTNYKVIGQLERGQRVRLDIKVGNWWSIYFGDHGGFVCADYI 228
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ T+ AS N R G G Y V+ L +G V + + NW
Sbjct: 172 YGTVTASVLNVRSGAGTNYKVIGQ-LERGQRVRLDIKVGNW 211
>gi|268610522|ref|ZP_06144249.1| hypothetical protein RflaF_13632 [Ruminococcus flavefaciens FD-1]
Length = 296
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 26/68 (38%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K+ I S + + LY +P S V V + + + WC+
Sbjct: 40 KKQRVIFSGYIIVPTGSKNVMLYAEPSTSSEEVTPVYLNDPVDVFKDEDGWCYVSCRFFN 99
Query: 177 GWIKKQKI 184
G+I+K+ I
Sbjct: 100 GYIQKEYI 107
>gi|170754539|ref|YP_001781718.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
gi|169119751|gb|ACA43587.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
Length = 257
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
WIN L GK I N P +N+ S I+ + G + +
Sbjct: 185 SKNNNSWIN---LDGKTGTI--------NTPSGVNVRAGKSTSSKILGALPNGAKVRLYR 233
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G+W Y G+I + I
Sbjct: 234 KEGDWIHIYYPPHGGYIYGKYI 255
>gi|151427598|tpd|FAA00356.1| TPA: predicted NADPH oxidase organizer 1 [Gallus gallus]
Length = 292
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 88 VEVV-KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
VEV+ K+ W + + D I W S L + + + +Y + ++
Sbjct: 189 VEVLLKDMTGWWLVENADKQIAWFPASYLEQLSLHKTTQPSLRPPGSLYFVMRAYEAQKA 248
Query: 147 IIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIK 180
++ + GV++ +R W +G++
Sbjct: 249 DELS-LNKGVVVEVVRRSDNGWWLIRYNGRKGYMP 282
>gi|119468476|ref|ZP_01611567.1| hypothetical protein ATW7_10533 [Alteromonadales bacterium TW-7]
gi|119447984|gb|EAW29249.1| hypothetical protein ATW7_10533 [Alteromonadales bacterium TW-7]
Length = 202
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ +F L + A + +V I R G Y ++ +
Sbjct: 1 MLKHCLFGLLLTATTFISYAQDEAQTASSSDANTAYV-IDNLYTFMRSGASKNYRLLGS- 58
Query: 82 LTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGKR 119
+ G + V+ E + +I+D GWI +S
Sbjct: 59 VDAGTKITVLSSEENGFIKIKDDKDREGWIETKFISTTP 97
>gi|146300439|ref|YP_001195030.1| SH3 type 3 domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154857|gb|ABQ05711.1| SH3, type 3 domain protein [Flavobacterium johnsoniae UW101]
Length = 193
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-- 172
+S K++AI P + N + L ++P +S + ++ LL + GEW
Sbjct: 119 VSKKKTAIYHPEDIVAVNSETLKLREEPGNESAFIETLKKYDLLMVIAIDGEWLQVKVIR 178
Query: 173 LDTEGWIKKQKIW 185
G++K + ++
Sbjct: 179 SGNFGYVKAEYVY 191
>gi|149659|gb|AAA25281.1| p60-related protein [Listeria welshimeri]
Length = 524
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGKYLGD 140
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
A+ S K P ++
Sbjct: 141 ---AVTSAPVAKQEVKQETTKQTAPAAETK 167
>gi|260775194|ref|ZP_05884092.1| arylsulfatase [Vibrio coralliilyticus ATCC BAA-450]
gi|260608895|gb|EEX35057.1| arylsulfatase [Vibrio coralliilyticus ATCC BAA-450]
Length = 203
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K++ L LA+ A++ + R+++ K GP + +
Sbjct: 1 MKKLVCFVLASLLAVPA------AMAQD----------RYISDKL-FTYMHSGPSNQFRI 43
Query: 78 VCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTN 131
+ + + G V+ + + + QI D G GW+ ++ + S +
Sbjct: 44 IGS-VDAGDKVKQLSTNRDTGYTQIEDAKGRKGWVESRFVTRQESMALRLPKLEKELADV 102
Query: 132 NPIYINLYKKPDIQSIIVA 150
N D + +A
Sbjct: 103 KGKLANARSSADQEKAGLA 121
>gi|261379395|ref|ZP_05983968.1| putative N-acetylmuramoyl-L-alanine amidase [Neisseria subflava
NJ9703]
gi|284797843|gb|EFC53190.1| putative N-acetylmuramoyl-L-alanine amidase [Neisseria subflava
NJ9703]
Length = 170
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 46/142 (32%), Gaps = 26/142 (18%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
AN R P ++ + +++ + W I+ G++++S
Sbjct: 31 GSANVRAAPDTRSKIMTVLDYESKKHKILSKQGKWFHIQLDGIRTGYVHQSQ------GF 84
Query: 123 VSPWNRKTNNPIYINLY-----KKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLD- 174
+ + N+ ++P Q I+ + G + I G+W + N
Sbjct: 85 IVHNYVVASPDGSANVRNNSYPEEPIRQGEIIKTLPNGTRVQIAPAFRKGDWLWYSNQGA 144
Query: 175 ------------TEGWIKKQKI 184
+G+I K ++
Sbjct: 145 YTEKDEYGHHISIQGYIHKSQL 166
>gi|167637861|ref|ZP_02396140.1| NLP/P60 family protein [Bacillus anthracis str. A0193]
gi|167514410|gb|EDR89777.1| NLP/P60 family protein [Bacillus anthracis str. A0193]
Length = 333
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQ 182
LY P + + +V L + +C + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYCVLLPNGQKAWLRKN 195
>gi|28897191|ref|NP_796796.1| hypothetical protein VP0417 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839921|ref|ZP_01992588.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|260878096|ref|ZP_05890451.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|260895979|ref|ZP_05904475.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|260902510|ref|ZP_05910905.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|28805400|dbj|BAC58680.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746553|gb|EDM57541.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|308086719|gb|EFO36414.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|308089985|gb|EFO39680.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|308109783|gb|EFO47323.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|328471960|gb|EGF42837.1| SH3 domain-containing protein [Vibrio parahaemolyticus 10329]
Length = 203
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V++++ + + Q+RD G GW+ ++ + S +
Sbjct: 33 MHSGPNNTYRIIGS-INAGSKVQLLQANKDTGYTQVRDDRGRTGWVQSKFVTNQESMAIR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDI-QSIIVAKVE 153
N + D ++ +V +E
Sbjct: 92 LPRIEKELSEVKEQLANARQTSDTEKAGLVTSLE 125
>gi|29378397|gb|AAO83900.1| invasion associated protein p60 [Listeria welshimeri]
Length = 524
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGKYLGD 140
Query: 118 KRSAIVSPWNRKTNN 132
++
Sbjct: 141 ALTSAPVAKQEVKQE 155
>gi|167856628|ref|ZP_02479324.1| hypothetical protein HPS_00005 [Haemophilus parasuis 29755]
gi|167852245|gb|EDS23563.1| hypothetical protein HPS_00005 [Haemophilus parasuis 29755]
Length = 202
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + + + + + + + E R GPG + + +
Sbjct: 1 MQKHISLFCSTLLLAISLPSFAQTQYVTENLNT-----------YLRKGPGDQFKIFGS- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ G V +++ + + IRD WI S L+ S+
Sbjct: 49 IQAGEKVTLIETKDRYSLIRDSKNREAWILNSELTSTPSS 88
>gi|160881130|ref|YP_001560098.1| cell wall hydrolase SleB [Clostridium phytofermentans ISDg]
gi|160429796|gb|ABX43359.1| cell wall hydrolase SleB [Clostridium phytofermentans ISDg]
Length = 488
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
++N+ + D + IV ++ TI E EW + G+ Q + Y E
Sbjct: 198 EFLNIRSEADSDATIVGQLNKNSYATIVERGEEWTKITSGKVTGYASNQYL---YFDEEA 254
Query: 194 K 194
K
Sbjct: 255 K 255
>gi|302380109|ref|ZP_07268583.1| bacterial SH3 domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302312095|gb|EFK94102.1| bacterial SH3 domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 140
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGW 178
+ +NL + S IV K++ L + E + + W G+
Sbjct: 73 TEKKTMKVTADILNLRSEASTNSSIVTKLKKDDELKVIEETKDDNGTTWVKVDFNGQVGF 132
Query: 179 IKKQKI 184
+ K+ +
Sbjct: 133 VSKEFL 138
>gi|254429069|ref|ZP_05042776.1| hypothetical protein ADG881_2299 [Alcanivorax sp. DG881]
gi|196195238|gb|EDX90197.1| hypothetical protein ADG881_2299 [Alcanivorax sp. DG881]
Length = 253
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ R ++ ++ P + VE LT+ W GW+ ++
Sbjct: 30 TAAVRVKVAEPFVEIHTGPGRGYPVFHVVERDAPLTLEYRRAGWIKVSTVRGRVGWVPRE 89
Query: 183 KI 184
+
Sbjct: 90 AL 91
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 9/135 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ L++ L + R V + GPG Y V + +
Sbjct: 4 VVILLSLIAVLPAWAEPETGADTKSDTAAVR-VKVAEPFVEIHTGPGRGYPV-FHVVERD 61
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P+ + W ++ G +GW+ R A+++ + P +L ++
Sbjct: 62 APLTLEYRRAGWIKVSTVRGRVGWV-------PREALLATLDGSEQTPEMKSLGQEAFQA 114
Query: 146 SIIVAKVEPGVLLTI 160
A V G L +
Sbjct: 115 GHWQASVLMGELDEV 129
>gi|172039584|ref|YP_001806085.1| hypothetical protein cce_4671 [Cyanothece sp. ATCC 51142]
gi|171701038|gb|ACB54019.1| unknown [Cyanothece sp. ATCC 51142]
Length = 114
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-------WRQIRDFDGTIGWINKS 113
++ R N R GPG Y + T + G V V W++I +++G GW+
Sbjct: 53 RSGRLNVRTGPGTNYRSL-TQIPNGTTVPVFDRTSGQDGTPHTWQRI-NYNGVQGWVRSD 110
Query: 114 LL 115
+
Sbjct: 111 YI 112
>gi|158333280|ref|YP_001514452.1| hypothetical protein AM1_0050 [Acaryochloris marina MBIC11017]
gi|158303521|gb|ABW25138.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 99
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 14/101 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI-MYTVVCT 80
L L+ ++++ F + P SR N R GP Y+
Sbjct: 3 LTRYLLSSISVSFLTIMAATPVVAEPAVLAGSQP------GSRVNVRSGPSTATYSPHYG 56
Query: 81 YLTKGLPV----EVVKEYE-NWRQIRDFDGTIGWINKSLLS 116
+ G V +VV + W +R G GWI +S
Sbjct: 57 LV--GDQVWIINQVVGDDGYAWFYVRFASGAEGWIRGDFIS 95
>gi|116871969|ref|YP_848750.1| P60 extracellular protein, invasion associated protein Iap
[Listeria welshimeri serovar 6b str. SLCC5334]
gi|266727|sp|Q01839|P60_LISWE RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149671|gb|AAA25287.1| extracellular protein [Listeria welshimeri]
gi|29378395|gb|AAO83899.1| invasion associated protein p60 [Listeria welshimeri]
gi|116740847|emb|CAK19967.1| P60 extracellular protein, invasion associated protein Iap
[Listeria welshimeri serovar 6b str. SLCC5334]
Length = 524
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGKYLGD 140
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
A+ S K P ++
Sbjct: 141 ---AVTSAPVAKQEVKQETTKQTAPAAETK 167
>gi|172056967|ref|YP_001813427.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989488|gb|ACB60410.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ T+ + + + ++ V I A R GP Y VV + + G
Sbjct: 4 LLTTMTMTALMVSGFSALPTQKAEA--ATTYKVKITADGVRVRTGPSTAYRVVGS-VNSG 60
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ +W +I + GT +++ + + + + P + +
Sbjct: 61 QTFNYLGVSGSWTKIS-YGGTARYVSSTYAKKYSVTTSTKASSGFSRPASGPITQGYGGA 119
Query: 146 SII 148
S +
Sbjct: 120 SGV 122
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 16/62 (25%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A + + + + P +V V G SG W T ++
Sbjct: 26 AEAATTYKVKITADGVRVRTGPSTAYRVVGSVNSGQTFNYLGVSGSWTKISYGGTARYVS 85
Query: 181 KQ 182
Sbjct: 86 ST 87
>gi|326795574|ref|YP_004313394.1| SH3 domain protein [Marinomonas mediterranea MMB-1]
gi|326546338|gb|ADZ91558.1| SH3 domain protein [Marinomonas mediterranea MMB-1]
Length = 222
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
R G V L G P+ V+ + + ++R G GW LS R
Sbjct: 34 IREGQSNNTRAVERGLKSGTPLVVLDKSSGYTKVRTPQGNEGWAADYFLSENR 86
>gi|300867222|ref|ZP_07111885.1| hypothetical protein OSCI_3280061 [Oscillatoria sp. PCC 6506]
gi|300334836|emb|CBN57051.1| hypothetical protein OSCI_3280061 [Oscillatoria sp. PCC 6506]
Length = 133
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 19/114 (16%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ L L L + +S LA +LA+ + +V R N
Sbjct: 23 RSLEQLGLN------IPSSAWMGLAGIAVALSVLAVPSDAYAA-------YVRTNGGRLN 69
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
R GPGI Y V G V++ Y W QI+ GW+ L +R
Sbjct: 70 VRCGPGIDYCVHSKLHN-GSHVKLTGHYKNGWAQIK----GGGWVASQWLGYRR 118
>gi|67921940|ref|ZP_00515456.1| hypothetical protein CwatDRAFT_4525 [Crocosphaera watsonii WH 8501]
gi|67856156|gb|EAM51399.1| hypothetical protein CwatDRAFT_4525 [Crocosphaera watsonii WH 8501]
Length = 113
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-------YENWRQIRDFDGTIGWINKS 113
+ R N R GPG+ Y T + G V +V W+Q+ +G GW+
Sbjct: 52 RNGRLNVRNGPGVNYR-RWTQVRNGQTVMIVNSAMGHDGGRYRWQQVY-INGREGWVRAD 109
Query: 114 LL 115
+
Sbjct: 110 YV 111
>gi|227115565|ref|ZP_03829221.1| putative signal transduction protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + ++ A + EK + L GPG Y +V T
Sbjct: 1 MQKLGLLCFTLFSLTLSWTAQAEEKRYISDELLTY----------VHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V + V E + QIRD WI LS S + +
Sbjct: 50 LNAGAEVTLLSVNENAGYAQIRDDKNRTTWIPLDQLSNTPSLRTRVPELENQVKDLTD 107
>gi|283797441|ref|ZP_06346594.1| cell wall-associated hydrolase [Clostridium sp. M62/1]
gi|291074800|gb|EFE12164.1| cell wall-associated hydrolase [Clostridium sp. M62/1]
Length = 235
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ + + P A + E + + VT++A + G VV + +G
Sbjct: 12 MFCVCSAVCLMNPAAARADEAQTGTDEGSA-VVTVEAQELSLYSGKSQESEVVGQAV-QG 69
Query: 86 LPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
EVV+E + W +I DGT G+ LL+ +SA++S + I
Sbjct: 70 DTYEVVEESSDGWVKICSEDGTEGY----LLADGKSAVISEDGQVAEEESDIR 118
>gi|295086580|emb|CBK68103.1| LysM domain./Bacterial SH3 domain. [Bacteroides xylanisolvens XB1A]
Length = 291
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
T++ Y N+ K + S I+ K+ + T E + W +G++ K +I
Sbjct: 178 TDSDGYTNIRKSNSVNSEIIGKIVDREVFTYWETNDNWYIVQTAKGIKGYVHKSRI 233
>gi|160886614|ref|ZP_02067617.1| hypothetical protein BACOVA_04626 [Bacteroides ovatus ATCC 8483]
gi|156107025|gb|EDO08770.1| hypothetical protein BACOVA_04626 [Bacteroides ovatus ATCC 8483]
Length = 291
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
T++ Y N+ K + S I+ K+ + T E + W +G++ K +I
Sbjct: 178 TDSDGYTNIRKSNSVNSEIIGKIVDREVFTYWETNDNWYIVQTAKGIKGYVHKSRI 233
>gi|317009934|gb|ADU80514.1| hypothetical protein HPIN_06605 [Helicobacter pylori India7]
Length = 188
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
KKPL V + S N R P ++ L K V+V++ +W +I +
Sbjct: 117 STPTMGKKPLEYKVAV--SGVNVRAFPSTKGKILGLLL-KNKSVKVLEIQNDWAEIEFSN 173
Query: 105 GTIGWINKSLLSG 117
T G++ LL
Sbjct: 174 KTKGYVFLKLLKK 186
>gi|317122225|ref|YP_004102228.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
gi|315592205|gb|ADU51501.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 168
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY----NLDTEGWIK 180
T Y+N+ +P S V + G + + E W EGW+
Sbjct: 103 AAQTATVTTQYLNVRAEPTQDSTRVGTLARGSTVQVLEEQNGWVRVRYQANGRTYEGWVD 162
Query: 181 KQKI 184
+ +
Sbjct: 163 ARYL 166
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSL 114
T+ N R P T V T L +G V+V++E W ++R GW++
Sbjct: 107 ATVTTQYLNVRAEPTQDSTRVGT-LARGSTVQVLEEQNGWVRVRYQANGRTYEGWVDARY 165
Query: 115 L 115
L
Sbjct: 166 L 166
>gi|213964306|ref|ZP_03392532.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
gi|213953048|gb|EEB64404.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
Length = 252
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-SRAN 66
+ Y + + ++ + ++AI I ++ EK + T++ S AN
Sbjct: 148 LCYYFLEKSSLKRLFFTLMFVSVAIAVGTYFIANFHKKQVDGEKYAILFDKTVRVFSEAN 207
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ Y+ L +G VE+ ++ +W +IR +G GW S L
Sbjct: 208 A-------YSSEVLQLHEGTKVEITEKKNDWVKIRLANGKTGWTKVSSL 249
>gi|187934436|ref|YP_001886910.1| hypothetical protein CLL_A2722 [Clostridium botulinum B str. Eklund
17B]
gi|187722589|gb|ACD23810.1| putative phage protein XkdP [Clostridium botulinum B str. Eklund
17B]
Length = 229
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 24/59 (40%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ P ++ I+ + G ++T G+W Y D G++ I
Sbjct: 168 GDKVKVTASALNVRSGPGTENDIIGTLYKGQIVTAYRVEGQWLHTYYGDHGGYVHMDYI 226
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-IGWIN 111
V + AS N R GPG ++ T L KG V + W + G G+++
Sbjct: 171 VKVTASALNVRSGPGTENDIIGT-LYKGQIVTAYRVEGQWLHT--YYGDHGGYVH 222
>gi|306843142|ref|ZP_07475762.1| SH3 type 3 domain-containing protein [Brucella sp. BO2]
gi|306286665|gb|EFM58223.1| SH3 type 3 domain-containing protein [Brucella sp. BO2]
Length = 193
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 30 TVNLRIGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|242238282|ref|YP_002986463.1| signal transduction protein [Dickeya dadantii Ech703]
gi|242130339|gb|ACS84641.1| SH3 type 3 domain protein [Dickeya dadantii Ech703]
Length = 205
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R GPG Y +V L G V V + + QIRD G WI LS S
Sbjct: 38 RSGPGNQYRIVGA-LNAGETVTVLGINRDAGYAQIRDDKGRASWIALDQLSETPS 91
>gi|13475447|ref|NP_107011.1| hypothetical protein mll6519 [Mesorhizobium loti MAFF303099]
gi|14026199|dbj|BAB52797.1| mll6519 [Mesorhizobium loti MAFF303099]
Length = 314
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C +WC GW+ K I
Sbjct: 263 VTMRSGPKKNAAAIGTVPARTSVQVMICK-QWCQIVYNGKTGWVYKSYI 310
>gi|319953223|ref|YP_004164490.1| sh3 type 3 domain protein [Cellulophaga algicola DSM 14237]
gi|319421883|gb|ADV48992.1| SH3 type 3 domain protein [Cellulophaga algicola DSM 14237]
Length = 297
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
L +++ Y+N+ P+ I+ K P L + E W
Sbjct: 227 LKQSKNSFTIGSTVYAQVDTYLNVRSTPNSTGAIIEKAYPKDGLKVLEILEAWVKIELNG 286
Query: 175 TEGWIKKQKI 184
+G++ K +
Sbjct: 287 KQGYVSKDFV 296
>gi|310766310|gb|ADP11260.1| putative signal transduction protein [Erwinia sp. Ejp617]
Length = 206
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
+R GPG Y +V T L G VE++++ +N + QIRD G WI LS + S
Sbjct: 36 ARSGPGNDYRLVGT-LNAGEEVELLQKNDNTKYGQIRDSQGRTTWIPLGQLSEQPS 90
>gi|224476729|ref|YP_002634335.1| hypothetical protein Sca_1243 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421336|emb|CAL28150.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 291
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKS 113
VT+K A R GP +Y + KG + + + W + DG GW+
Sbjct: 46 VTMKED-AELRTGPNAVYPEIFP-ADKGETFKQLDKKGKWLYVSTQDGKEKGWVAGW 100
>gi|29378425|gb|AAO83914.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWXKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|16119590|ref|NP_396296.1| hypothetical protein Atu8205 [Agrobacterium tumefaciens str. C58]
gi|15162152|gb|AAK90737.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 148
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + + G LTIR C WC GW +
Sbjct: 33 VNVRTGPGTRYPRTGTIPAGATLTIRGCLNGYSWCEVIFAGQSGWASSNYL 83
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGK 118
N R GPG Y T + G + + W ++ F G GW + + L
Sbjct: 33 VNVRTGPGTRYPRTGT-IPAGATLTIRGCLNGYSWCEVI-FAGQSGWASSNYLQAT 86
>gi|307718239|ref|YP_003873771.1| hypothetical protein STHERM_c05290 [Spirochaeta thermophila DSM
6192]
gi|306531964|gb|ADN01498.1| hypothetical protein STHERM_c05290 [Spirochaeta thermophila DSM
6192]
Length = 117
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y L+ P +V + G +L I E G WC EGW+ + +
Sbjct: 42 AVVQDAYARLWDAPPPGGSVVGILRRGDMLEIVEEEGAWCRVVRGTEEGWVGEGHL 97
>gi|260062508|ref|YP_003195588.1| endopeptidase-like protein [Robiginitalea biformata HTCC2501]
gi|88784073|gb|EAR15243.1| endopeptidase-related protein [Robiginitalea biformata HTCC2501]
Length = 250
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
+ +Y PD + + ++ G I E W EGW++ ++
Sbjct: 10 LVPVYDSPDDTTPLRTQLLYGECFKILESRKYWSRVRIRLDGAEGWVRNDQL 61
>gi|304320362|ref|YP_003854005.1| peptidase/amylase-like protein [Parvularcula bermudensis HTCC2503]
gi|303299264|gb|ADM08863.1| peptidase/amylase-like protein [Parvularcula bermudensis HTCC2503]
Length = 258
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--TEGWIKKQKI 184
+ P+ + V + G ++ E + +W N D EGWI + +
Sbjct: 14 REAPNPTAEAVTDLLYGERQSVLEETADWVRVRNRDDAYEGWIPQAAL 61
>gi|253689769|ref|YP_003018959.1| SH3 domain protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251756347|gb|ACT14423.1| SH3 domain protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 206
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + ++ A + EK + L GPG Y +V T
Sbjct: 1 MQKLGLLCFTLFSLTLSWTAQAEEKRYISDELLTY----------VHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
L G V + V E + QIRD WI LS S + +
Sbjct: 50 LNAGAEVTLLSVNENAGYAQIRDDKNRTTWIPLDQLSNTPSLRTRVPELENQVKDLTD 107
>gi|30314065|gb|AAO47058.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314077|gb|AAO47064.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314081|gb|AAO47066.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314083|gb|AAO47067.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 33 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 91
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 92 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 123
>gi|29378431|gb|AAO83917.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVEATESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|288803135|ref|ZP_06408570.1| bacterial SH3 domain protein [Prevotella melaninogenica D18]
gi|288334396|gb|EFC72836.1| bacterial SH3 domain protein [Prevotella melaninogenica D18]
Length = 358
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
++ + ++ +N+ + A+ +L LS + F ++ N R
Sbjct: 260 KELIQRMEKNNYYGSTALRDVAKAVLLLSSTTDDFAD----YYIEDPDGYTNVRTSGSSK 315
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
++ T + G V V+++ +W +++ +G +G+I+KS
Sbjct: 316 AKII-TQVKSGSFVNVIEKRGDWWKVKTDNGKVGYIHKS 353
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+ Y N+ ++ I+ +V+ G + + E G+W + + G+I K +I
Sbjct: 300 EDPDGYTNVRTSGSSKAKIITQVKSGSFVNVIEKRGDWWKVKTDNGKVGYIHKSRI 355
>gi|313905024|ref|ZP_07838394.1| glycoside hydrolase family 18 [Eubacterium cellulosolvens 6]
gi|313470094|gb|EFR65426.1| glycoside hydrolase family 18 [Eubacterium cellulosolvens 6]
Length = 556
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 117 GKRSAIVSPWNRKTNNPIY----INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY- 171
S IV+ N K + + +S I+ +V+ G + + + +WC
Sbjct: 146 DNPSRIVARTNWKNIAAETMVEDAPVRFRGGPKSEILTRVKAGDTVVLTAHADDWCEVST 205
Query: 172 NLDTEGWIKKQKI 184
G++KK+++
Sbjct: 206 ADGYIGYVKKKQL 218
>gi|229171020|ref|ZP_04298620.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
gi|228612456|gb|EEK69678.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
Length = 539
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 12/104 (11%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
I+ + Y+PK I L I S +K I V I N
Sbjct: 435 IVKGMGDNLYVPKGTTTRGETAAFILNMLQVIETGSVQKGIGT-------VEINGIGVNV 487
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
R G G Y+VV +KG V +E W +I GT W+
Sbjct: 488 RSGAGASYSVV-RKASKGEKATVYEEKSGWLRI----GTGEWVY 526
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
++ N I +N+ +V K G T+ E W + W+
Sbjct: 470 SVQKGIGTVEINGIGVNVRSGAGASYSVVRKASKGEKATVYEEKSGWLRIGTGE---WVY 526
>gi|70983965|ref|XP_747508.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|66845134|gb|EAL85470.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|159123514|gb|EDP48633.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 246
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
P++ALS + P I + N R GPG Y VV +Y KG V +V +
Sbjct: 1 MLYLPLVALSFATTLVSAYP------ITGNGVNCRSGPGTNYPVVKSY-PKGHEVSIVCQ 53
Query: 94 YENWRQIRDFDGTIGW 109
D G W
Sbjct: 54 APG----TDIKGDKLW 65
>gi|156537678|ref|XP_001607886.1| PREDICTED: similar to dynamin-associated protein [Nasonia
vitripennis]
Length = 1069
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS---GKRSAIVSPWNRKTNNPIYINLY 139
KG V + ++ + W GT+GW KS + A + N YI+LY
Sbjct: 779 GKGETVTIKEQQDVWCYGESSTGTVGWFPKSYVKMDVANGQAATTAPTGDGLNEYYISLY 838
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ ++ + G ++ + + G+W G D +G
Sbjct: 839 QYASNEAGDL-NFNQGEVMLVIKKDGDWWTGVIGDRQG 875
>gi|260912422|ref|ZP_05918962.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 472
str. F0295]
gi|260633457|gb|EEX51607.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 472
str. F0295]
Length = 398
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+++ N R G+ ++ + G V V+++ +W +++ DGTIG+I+KS
Sbjct: 336 YYISDSDGYCNIRKSKGLSAQII-KRIASGCFVNVLEKQGDWWKVKTEDGTIGYIHKS 392
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+++ Y N+ K + + I+ ++ G + + E G+W D G+I K +I
Sbjct: 339 SDSDGYCNIRKSKGLSAQIIKRIASGCFVNVLEKQGDWWKVKTEDGTIGYIHKSRI 394
>gi|322420203|ref|YP_004199426.1| SH3 type 3 domain-containing protein [Geobacter sp. M18]
gi|320126590|gb|ADW14150.1| SH3 type 3 domain protein [Geobacter sp. M18]
Length = 157
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GWIKKQK 183
T I L K P ++ +VA ++ +T CSG W + D + GW
Sbjct: 30 TVTAPEIRLRKTPSKKAKVVAILKKDTKVTAESCSGGWVKVASGDGKLNGYVGGWALASA 89
>gi|237668495|ref|ZP_04528479.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237656843|gb|EEP54399.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 287
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R P + + L G + +V E E W +I D +G++ +
Sbjct: 71 NVRREPSVDSPI-GNTLDNGETINIVDEKEGWYEIEGNDNVVGYVKSDYV 119
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 111 NKSLL-SGKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ LL S K + IV+ K + N+ ++P + S I ++ G + I +
Sbjct: 37 HEELLYSNKTNDIVADDYSKYEKKGTVVNVESILNVRREPSVDSPIGNTLDNGETINIVD 96
Query: 163 CSGEWCFGYNLD-TEGWIKKQKI 184
W D G++K +
Sbjct: 97 EKEGWYEIEGNDNVVGYVKSDYV 119
>gi|182417053|ref|ZP_02948431.1| bacterial SH3 domain family [Clostridium butyricum 5521]
gi|182379062|gb|EDT76566.1| bacterial SH3 domain family [Clostridium butyricum 5521]
Length = 287
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R P + + L G + +V E E W +I D +G++ +
Sbjct: 71 NVRREPSVDSPI-GNTLDNGETINIVDEKEGWYEIEGNDNVVGYVKSDYV 119
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 111 NKSLL-SGKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ LL S K + IV+ K + N+ ++P + S I ++ G + I +
Sbjct: 37 HEELLYSNKTNDIVADDYSKYEKKGTVVNVESILNVRREPSVDSPIGNTLDNGETINIVD 96
Query: 163 CSGEWCFGYNLD-TEGWIKKQKI 184
W D G++K +
Sbjct: 97 EKEGWYEIEGNDNVVGYVKSDYV 119
>gi|29378445|gb|AAO83924.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|295091003|emb|CBK77110.1| N-acetylmuramoyl-L-alanine amidase [Clostridium cf. saccharolyticum
K10]
Length = 511
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +NL + S I+A+++ G +L + EW ++ Q +
Sbjct: 204 TVQENGVNLRAESQTGSRIIAQLQAGEVLERTGKNEEWSRVLYDGRTCYVASQYV 258
>gi|148258434|ref|YP_001243019.1| hypothetical protein BBta_7236 [Bradyrhizobium sp. BTAi1]
gi|146410607|gb|ABQ39113.1| hypothetical protein BBta_7236 [Bradyrhizobium sp. BTAi1]
Length = 165
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ +N+ P+++ V + G LTI C WC GW I
Sbjct: 31 AGVNLNIRSGPNVRFPAVGVLGSGSSLTIHGCLSGYKWCDVSASGLRGWASGAHI 85
>gi|257470360|ref|ZP_05634451.1| hypothetical protein FulcA4_13532 [Fusobacterium ulcerans ATCC
49185]
Length = 387
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 7 KILYSLDLRKYMPKILQNSL-----IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK 61
++L + + +M S T+AIY P + +EK + +V ++
Sbjct: 2 RLLKTALISLFMIGTAAFSFDGDTSWTTVAIYDNEMPENVILNEKYNGGHPKVLDYVFVR 61
Query: 62 ASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGK 118
AN R P ++ Y K +E + +Y N W ++ G G+I S++ K
Sbjct: 62 TRTANLRDLPSTKGKIIKKFNYDAKLKALEKIYDYGNYWYKVETDKGETGYI-SSMVVRK 120
Query: 119 R 119
R
Sbjct: 121 R 121
>gi|29378459|gb|AAO83931.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378441|gb|AAO83922.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|119492938|ref|ZP_01623968.1| hypothetical protein L8106_26462 [Lyngbya sp. PCC 8106]
gi|119452864|gb|EAW34038.1| hypothetical protein L8106_26462 [Lyngbya sp. PCC 8106]
Length = 191
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-----NWRQIRDFDGTIGWI 110
++ N R P + ++ L G PVEV+++ + NW I DG GW+
Sbjct: 128 ISTDGRPINLRTTPSLASSLGS--LQNGEPVEVIEQGKSNDGVNWYYISSVDGLTGWV 183
>gi|9247209|gb|AAF86304.1| hypothetical protein [Streptomyces lincolnensis]
Length = 107
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 9/107 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-------TIKASRANSRIG 70
M K + + + P+ E V T+ N R G
Sbjct: 1 MQKRMLAAAALISGVALIAGPLAQAGQATETVAPASGSAHVVRQDLICTVNDDGVNFRGG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-WINKSLLS 116
PG + V+ + +G + W GT G WI S L
Sbjct: 61 PGTNHPVLGK-VNRGDQLIYRDYDGRWIMGDLVGGTTGVWIYDSYLD 106
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG-W 178
+V T N +N P ++ KV G L R+ G W G T G W
Sbjct: 40 HVVRQDLICTVNDDGVNFRGGPGTNHPVLGKVNRGDQLIYRDYDGRWIMGDLVGGTTGVW 99
Query: 179 IKKQKI 184
I +
Sbjct: 100 IYDSYL 105
>gi|29378555|gb|AAO83979.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K + + P ++
Sbjct: 143 K-AVSTPVAPTQEVEKETTTQQAAPAAETK 171
>gi|29378475|gb|AAO83939.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 449
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 49 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 107
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 108 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 139
>gi|325284630|ref|YP_004264093.1| parallel beta-helix repeat [Deinococcus proteolyticus MRP]
gi|324316119|gb|ADY27233.1| parallel beta-helix repeat [Deinococcus proteolyticus MRP]
Length = 954
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 18/52 (34%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +NL D +A + LL + GEW GW+ +
Sbjct: 369 PATLNLRPSADASGTPLAAIPGRTLLPVLSQKGEWYKVRYGKLTGWVSGGYV 420
>gi|29378463|gb|AAO83933.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|284800862|ref|YP_003412727.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284994048|ref|YP_003415816.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
gi|29378429|gb|AAO83916.1| invasion associated protein p60 [Listeria monocytogenes]
gi|284056424|gb|ADB67365.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284059515|gb|ADB70454.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
Length = 482
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378479|gb|AAO83941.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378461|gb|AAO83932.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|80159794|ref|YP_398538.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
c-st]
gi|78675384|dbj|BAE47806.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
c-st]
Length = 242
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 28/70 (40%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ + + +++ +N+ SI + K+ G + I + G W Y D
Sbjct: 170 ITNRETKVINNEVYGIVTASVLNIRDGASTNSIKIGKLIKGEQVHIFKDYGNWLSIYYGD 229
Query: 175 TEGWIKKQKI 184
G+I + +
Sbjct: 230 HGGYISSKYV 239
>gi|29378467|gb|AAO83935.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|29378465|gb|AAO83934.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 450
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|325840149|ref|ZP_08166957.1| SH3 domain protein [Turicibacter sp. HGF1]
gi|325490388|gb|EGC92711.1| SH3 domain protein [Turicibacter sp. HGF1]
Length = 182
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNL 173
S + V T N +N+ ++P + I+ ++ G +T+ + EW
Sbjct: 109 SEQPVVEVPQTVEATCNIDGVNVREEPKTGTTIIGQLISGEKITVLNRNYSDEWVQVSYD 168
Query: 174 DTEGWIKKQKI 184
G++ + +
Sbjct: 169 GQTGYVYHEYL 179
>gi|293374852|ref|ZP_06621154.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
gi|292646521|gb|EFF64529.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
Length = 182
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNL 173
S + V T N +N+ ++P + I+ ++ G +T+ + EW
Sbjct: 109 SEQPVVEVPQTVEATCNIDGVNVREEPKTGTTIIGQLISGEKITVLNRNYSDEWVQVSYD 168
Query: 174 DTEGWIKKQKI 184
G++ + +
Sbjct: 169 GQTGYVYHEYL 179
>gi|255007503|ref|ZP_05279629.1| hypothetical protein Bfra3_00090 [Bacteroides fragilis 3_1_12]
gi|313145198|ref|ZP_07807391.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313133965|gb|EFR51325.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 352
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 28 EVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKISFNGGYGYVSTAYI 83
>gi|227328983|ref|ZP_03833007.1| putative signal transduction protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + ++ A + EK + L GPG Y +V T
Sbjct: 1 MQKLGLLCFTLFSLTLSWTAQAEEKRYISDELLTY----------VHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ G V + V E + QIRD WI LS S + +
Sbjct: 50 VNAGAEVTLLSVNENAGYAQIRDDKNRTTWIPLDQLSNTPSLRTRVPELENQVKDLTD 107
>gi|164686910|ref|ZP_02210938.1| hypothetical protein CLOBAR_00506 [Clostridium bartlettii DSM
16795]
gi|164604300|gb|EDQ97765.1| hypothetical protein CLOBAR_00506 [Clostridium bartlettii DSM
16795]
Length = 263
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 60 IKASRANSRIGPGIMYTVVC--TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
+ S N R G Y + +Y + V +VK + W +I+ ++ G++N++ +S
Sbjct: 24 VTVSNLNVRSGASTKYRKIGSLSYNKR---VTIVKTLKEWYKIK-YNSGYGYVNRAYIST 79
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + + N+ K + + G +
Sbjct: 80 SSRYSKDLDGFLFVGDSFTNNIRKNINSNAKNTVIRAKGSV 120
>gi|292493268|ref|YP_003528707.1| SH3 type 3 domain protein [Nitrosococcus halophilus Nc4]
gi|291581863|gb|ADE16320.1| SH3 type 3 domain protein [Nitrosococcus halophilus Nc4]
Length = 245
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
PK L + ++ +LAL+ R++T R G GI + V
Sbjct: 12 FPKYANRIGASLLRVVLFVTTLLALTPASAQTI-----RYIT-DHIEVTLRSGQGIEHRV 65
Query: 78 VCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ L G+ V+V++ + + +I+ +G GW+ L SA
Sbjct: 66 L-QTLESGVTVKVLETSPQGYSRIQTEEGVEGWVLSRYLMSTPSA 109
>gi|29378565|gb|AAO83984.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|52141838|ref|YP_084991.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
gi|51975307|gb|AAU16857.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
Length = 351
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
I+ N R GP +V+ L KG +V + NW + G WI S +
Sbjct: 218 IQGDNVNLRSGPSTDNSVI-RKLQKGEAYKVWGKLGNWLNL----GGNQWIYYDSSYIRY 272
Query: 118 KRS-AIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ A + + + Y+ P + VA
Sbjct: 273 NGTNASTVAGKKIISKVDNLRFYESPSWRDKEVA 306
>gi|1171970|sp|P21171|P60_LISMO RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|44101|emb|CAA36509.1| unnamed protein product [Listeria monocytogenes]
Length = 484
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|47096875|ref|ZP_00234454.1| protein P60 [Listeria monocytogenes str. 1/2a F6854]
gi|258612083|ref|ZP_05267286.2| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293596452|ref|ZP_05261273.2| protein p60 [Listeria monocytogenes J2818]
gi|29378439|gb|AAO83921.1| invasion associated protein p60 [Listeria monocytogenes]
gi|47014740|gb|EAL05694.1| protein P60 [Listeria monocytogenes str. 1/2a F6854]
gi|258608169|gb|EEW20777.1| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293589192|gb|EFF97526.1| protein p60 [Listeria monocytogenes J2818]
Length = 480
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|323499429|ref|ZP_08104401.1| SH3 domain-containing protein [Vibrio sinaloensis DSM 21326]
gi|323315485|gb|EGA68524.1| SH3 domain-containing protein [Vibrio sinaloensis DSM 21326]
Length = 203
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 18/130 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ L + +A AL+ ++ I +K GP Y ++ + + G
Sbjct: 4 LVFLVLATLVAAPAALAQDRYIADKLFT-----------YMHSGPSNQYRIIGS-IDAGD 51
Query: 87 PVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYK 140
V+++ + + QI+D G GW+ ++ + S + N
Sbjct: 52 KVKLISTNKESGYSQIQDERGRKGWVESKFVTRQESMALRLPKLEKELAETKEKLANARA 111
Query: 141 KPDIQSIIVA 150
D + +A
Sbjct: 112 TSDQEKAGLA 121
>gi|323485741|ref|ZP_08091077.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323400921|gb|EGA93283.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
Length = 237
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 116 SGKRSAIVSPWNR------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWC 168
+G ++ + P + I++Y + + S +VA + G + + E S W
Sbjct: 22 AGTQTVLAGPADGFEAEMVAKVEAADISIYAEENEGSEVVAMAQKGGIYDVVESGSDGWV 81
Query: 169 FGYNLDTEGWIKKQKI 184
D EG++K I
Sbjct: 82 RVTAGDKEGYLKTDGI 97
>gi|260599316|ref|YP_003211887.1| SH3 domain-containing protein [Cronobacter turicensis z3032]
gi|260218493|emb|CBA33663.1| Uncharacterized protein ygiM [Cronobacter turicensis z3032]
Length = 194
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 56 RFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R+V+ N R GPG Y +V T + G V +++ + QIRD G WI
Sbjct: 16 RYVS---DELNTWVRSGPGDNYRLVGT-VNAGEEVALLESNGKYGQIRDTSGRTSWIPLE 71
Query: 114 LLSGKRSAIVSPWNRKTNNPIYIN 137
L + S + +
Sbjct: 72 QLKSEPSLRTRVPELENQVKTLTD 95
>gi|323693081|ref|ZP_08107300.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
gi|323502835|gb|EGB18678.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
Length = 237
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 116 SGKRSAIVSPWNR------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWC 168
+G ++ + P + I++Y + + S +VA + G + + E S W
Sbjct: 22 AGTQTVLAGPADGFEAEMVAKVEAADISIYAEENEGSEVVAMAQKGGIYDVVESGSDGWV 81
Query: 169 FGYNLDTEGWIKKQKI 184
D EG++K I
Sbjct: 82 RVTAGDKEGYLKTDGI 97
>gi|29378455|gb|AAO83929.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 63 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 121
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 122 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 153
>gi|224498661|ref|ZP_03667010.1| invasion associated secreted endopeptidase [Listeria monocytogenes
Finland 1988]
Length = 478
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 141 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 172
>gi|29378433|gb|AAO83918.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378477|gb|AAO83940.1| invasion associated protein p60 [Listeria ivanovii subsp. ivanovii]
Length = 446
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|323487925|ref|ZP_08093182.1| peptidoglycan hydrolase [Planococcus donghaensis MPA1U2]
gi|323398409|gb|EGA91198.1| peptidoglycan hydrolase [Planococcus donghaensis MPA1U2]
Length = 246
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWC 168
S + S+ + + N+ ++ +V + G + T + W
Sbjct: 42 STIEQVASSKATAKSGTFKTKYNSNIRADAGTKNKVVTVAKKGSIATATHQKKVGNSTWY 101
Query: 169 FGYNLDTEGWIKKQKI 184
GWI +
Sbjct: 102 KVKVNGKSGWILSTLL 117
>gi|224502117|ref|ZP_03670424.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL R2-561]
Length = 484
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 141 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 172
>gi|220935696|ref|YP_002514595.1| hypothetical protein Tgr7_2532 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997006|gb|ACL73608.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 219
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 62 ASRANS--RIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGK 118
+ N R G + + ++ G VEV++ E+ + IR +GT GW+ S L+ +
Sbjct: 25 SDDLNVAIRSGKTFQHRI-MRFVPSGARVEVLQRDEDGYVLIRTQEGTEGWLEGSNLANQ 83
Query: 119 RSA 121
A
Sbjct: 84 PHA 86
>gi|254900185|ref|ZP_05260109.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J0161]
Length = 478
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 141 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 172
>gi|254828351|ref|ZP_05233038.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
gi|258600744|gb|EEW14069.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
Length = 480
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 141 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 172
>gi|29378427|gb|AAO83915.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378471|gb|AAO83937.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 465
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 63 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 121
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 122 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 153
>gi|29378447|gb|AAO83925.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 446
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|29378481|gb|AAO83942.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 453
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 53 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 111
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 112 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 143
>gi|29378457|gb|AAO83930.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 494
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378443|gb|AAO83923.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|29378453|gb|AAO83928.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 63 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 121
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 122 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 153
>gi|16802625|ref|NP_464110.1| invasion associated secreted endopeptidase [Listeria monocytogenes
EGD-e]
gi|16409958|emb|CAC98661.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes EGD-e]
Length = 482
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 141 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 172
>gi|260463537|ref|ZP_05811736.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
gi|259030628|gb|EEW31905.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
Length = 285
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C +WC GW+ K I
Sbjct: 233 AVTMRSGPKKHAAAIVTVPAKTSVQVMSCK-QWCQIVYNGKTGWVYKSYI 281
>gi|27378672|ref|NP_770201.1| hypothetical protein blr3561 [Bradyrhizobium japonicum USDA 110]
gi|27351821|dbj|BAC48826.1| blr3561 [Bradyrhizobium japonicum USDA 110]
Length = 165
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+ + +N+ P ++ V ++ G LTI C WC GW +
Sbjct: 30 SGVNLNVRSGPSVRFQAVGRLMAGSSLTIHGCLARYTWCDVSASGVRGWASGAHV 84
>gi|327395285|dbj|BAK12707.1| SH3 domain protein YgiM [Pantoea ananatis AJ13355]
Length = 206
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
I I LA +H E R+V+ + R GPG + ++ L
Sbjct: 4 ITLAGITLLALSTLAPAHADEK-------RYVS---DELSTWVRSGPGDQFRLLGK-LNA 52
Query: 85 GLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRS 120
G V++++ + + Q+RD +G WI S LS S
Sbjct: 53 GEQVQLLQTNDATKYGQVRDAEGRTVWIPLSQLSENPS 90
>gi|156740493|ref|YP_001430622.1| restriction endonuclease [Roseiflexus castenholzii DSM 13941]
gi|156231821|gb|ABU56604.1| restriction endonuclease [Roseiflexus castenholzii DSM 13941]
Length = 364
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLS 116
+ N R P + V+ + G VE++ NW IR+ +GW +++LL+
Sbjct: 296 NGGNVRAAPNLRGAVL-DQVHAGEIVELLGRSPDGNWFYIRNPRNQVGWTHRTLLN 350
>gi|16332284|ref|NP_443012.1| hypothetical protein slr1178 [Synechocystis sp. PCC 6803]
gi|1653914|dbj|BAA18824.1| slr1178 [Synechocystis sp. PCC 6803]
Length = 155
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R P + T + V V+ W ++R GT GW+ L +
Sbjct: 101 NVRTEPDRESDSLAT-INYNDEVVVLATQGEWSKLRLSGGTEGWVRSGNLEKLPT 154
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ +PD +S +A + + + GEW + TEGW++ +
Sbjct: 100 LNVRTEPDRESDSLATINYNDEVVVLATQGEWSKLRLSGGTEGWVRSGNL 149
>gi|29378563|gb|AAO83983.1| invasion associated protein p60 [Listeria welshimeri]
Length = 522
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGKYLGD 140
Query: 118 KRSAIVSPWNRKTNN 132
++
Sbjct: 141 AVTSAPVAKQEVKQE 155
>gi|148379710|ref|YP_001254251.1| bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase)
[Clostridium botulinum A str. ATCC 3502]
gi|148289194|emb|CAL83288.1| bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase)
[Clostridium botulinum A str. ATCC 3502]
Length = 253
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ WIN L GK I +P +N+ +K S I+ + G + +
Sbjct: 182 NNNNSWIN---LDGKTGTICTPSG--------VNIREKKSTSSRILGALPNGAKVQLYRK 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ ++ I
Sbjct: 231 EGDWIHIYYPPHGGYVYEKYI 251
>gi|114707958|ref|ZP_01440850.1| hypothetical protein FP2506_13329 [Fulvimarina pelagi HTCC2506]
gi|114536587|gb|EAU39719.1| hypothetical protein FP2506_13329 [Fulvimarina pelagi HTCC2506]
Length = 213
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 12/138 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIM 74
M + S + + A E + P +V + R GPG+
Sbjct: 1 MCRKTVASAVALAILSVAGLSTSATDAEALSITQAPHSYSALYVEGASYGGKVRSGPGMQ 60
Query: 75 YT-VVCTYLTKGLPVEVVKEY---ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
Y+ + TY +G+ + E NW QI+ +G IG+ LL G +
Sbjct: 61 YSQIASTYNGQGVVLIATSEPMDGYNWFQIQLSNGQIGYQWGGLLCGNGY-----QDGVL 115
Query: 131 NNPIYINLYKKPDIQSII 148
+ + P + +
Sbjct: 116 ADCWAQSAQSNPAQNAPV 133
>gi|331090202|ref|ZP_08339090.1| hypothetical protein HMPREF1025_02673 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402148|gb|EGG81720.1| hypothetical protein HMPREF1025_02673 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 495
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFD-GTIG 108
P V + N R GPG Y Y KG +V+E E W ++ + G
Sbjct: 427 PYLVRVSIEDLNIRRGPGTDYDKTGKYTGKGA-FTIVEEAEGKGASLWGLLKSYQKNRDG 485
Query: 109 WIN 111
WI+
Sbjct: 486 WIS 488
>gi|29378421|gb|AAO83912.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 440
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGETGFVNGKYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|298245908|ref|ZP_06969714.1| NLP/P60 protein [Ktedonobacter racemifer DSM 44963]
gi|297553389|gb|EFH87254.1| NLP/P60 protein [Ktedonobacter racemifer DSM 44963]
Length = 286
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + P+ +S +V + + + ++ SG+W D EGW+ + +
Sbjct: 16 ADVRRDPNPESELVTQALLNMPASTQQTSGDWTHVQLSDYEGWVLTEHL 64
>gi|260889132|ref|ZP_05900395.1| putative N-acetylmuramoyl-L-alanine amidase [Leptotrichia hofstadii
F0254]
gi|260861192|gb|EEX75692.1| putative N-acetylmuramoyl-L-alanine amidase [Leptotrichia hofstadii
F0254]
Length = 281
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 13/68 (19%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-------------YNLDTE 176
++ Y NL +KP S IV+K++ ++ SG+W + +
Sbjct: 209 SSKDGYTNLREKPTTNSRIVSKMDNRTVVKYITKSGDWYYIFDVEYPDESNKLTKTKEYR 268
Query: 177 GWIKKQKI 184
G+I K ++
Sbjct: 269 GFIHKSQL 276
>gi|317498839|ref|ZP_07957126.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893902|gb|EFV16097.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 223
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
L +S ++ ++E G +T+ SG+W G++ K+ ++
Sbjct: 46 CKLRASKSKRSKVLKRLEIGTPVTVYSTSGQWRKVSVDGKTGYVLKKYVY 95
>gi|253996387|ref|YP_003048451.1| SH3 type 3 domain-containing protein [Methylotenera mobilis JLW8]
gi|253983066|gb|ACT47924.1| SH3 type 3 domain protein [Methylotenera mobilis JLW8]
Length = 172
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
R P V ++ +G +E++K+ W Q++ G+ GW+ LLS KR
Sbjct: 37 LRNEPFADAKVTGSF-ARGENLEIIKKQGAWLQVKAAKGS-GWV--RLLSVKR 85
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 20/58 (34%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+S K + +L +P + + G L I + G W GW++
Sbjct: 22 ISVAAEKGSALKNDSLRNEPFADAKVTGSFARGENLEIIKKQGAWLQVKAAKGSGWVR 79
>gi|88705949|ref|ZP_01103657.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
gi|88699663|gb|EAQ96774.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
Length = 221
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 29/139 (20%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS--RIGPGIMYTVVCTYLTKGLPV 88
AI L +L H +E R+++ GPG Y L K +P
Sbjct: 4 AILILLLSAGSLVHAQES-------RYIS---DEVFVVLHAGPGSNYR--W--LGKLIPG 49
Query: 89 EVVKEY-----ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLY 139
+ E NW ++ GT GW+ LS + A V + L
Sbjct: 50 TELTEKRRSTDGNWAEVATARGTEGWVQAEYLSTEPPAQVRLPAVVRQLEEAQQESAELR 109
Query: 140 KK----PDIQSIIVAKVEP 154
QS + A++
Sbjct: 110 SSLAELRTEQSAVSAQLAK 128
>gi|158521951|ref|YP_001529821.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510777|gb|ABW67744.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 522
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 38/190 (20%)
Query: 29 TLAIYFYLAPILALSHEK-EIFEKKPLPRF-VTIKASRANSRIGPGIMYTVVCTYLTKGL 86
T A P+ A++ E+ E P + N R P + V L +
Sbjct: 329 TAAATPLRPPVAAMAPEETAAVETTAQPETKIRSTVDLLNIRAMPSVNSRRVGKLL-QNE 387
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTNN--------- 132
VV+ +W +I DGT G++ K +G S ++ P ++K
Sbjct: 388 IATVVETLVDWVKIEKPDGTTGYVFKEYTAMVHETGDASRVLQPESQKAQATVNMPMVPV 447
Query: 133 -------------------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YN 172
+ + +P S V ++ + E W
Sbjct: 448 VTAPVAVASASTVPKIRPIVDALEMRSEP-FGSEQVGQLLRNEAAEVVESRAGWIKIKKA 506
Query: 173 LDTEGWIKKQ 182
T G++ K+
Sbjct: 507 DGTTGYVFKE 516
>gi|29378423|gb|AAO83913.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 450
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 56 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGETGFVNGKYLTD 114
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 115 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 146
>gi|51892127|ref|YP_074818.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
thermophilum IAM 14863]
gi|51855816|dbj|BAD39974.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
thermophilum IAM 14863]
Length = 565
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 8/152 (5%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
L P+ A P VT + + RIG V + +P +++
Sbjct: 26 VLVPMRAYLESLGAEVGWEPPNLVTARMGEHTVSLRIG-QYTAQVDGREVPLDVPAQIIA 84
Query: 93 EYENWRQIR-DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + +R +G + + + + +P + +N+ +P + I+
Sbjct: 85 D-RTYVPLRFLSEGLGAEVGYDGATRTVTVVTAPPGQLEVIDGPLNVRAEPSTTAPILTT 143
Query: 152 VEPGVLLTI--RECSGEWCFGYNLDTE-GWIK 180
V G L I + EW GW+
Sbjct: 144 VPVGTRLDIVSEQPGAEWTQVALPGGTLGWVA 175
>gi|47223998|emb|CAG06175.1| unnamed protein product [Tetraodon nigroviridis]
Length = 973
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L + R + R Y+
Sbjct: 31 LKAGETVDVIEKSESGWWFVSTAE-EQGWVRATYLDSQNATRDDLDRGTFRTGEEEKYVT 89
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
L V+ E GV + + + + W F L EGW +
Sbjct: 90 LQSYTSQGKDEVS-FEKGVTVEVIQKNLEGWWFIRYLGKEGWAPASYL 136
>gi|320162528|ref|YP_004175753.1| hypothetical protein ANT_31270 [Anaerolinea thermophila UNI-1]
gi|319996382|dbj|BAJ65153.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
Length = 407
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN---SRIGPGIMYTVVCTYLTKGLP 87
A ++ + +P P + I +N R PG +V + L G+
Sbjct: 307 ATATPTRTLIPTNTPTMTVTPQPTPVWARINVKGSNGAVIRAEPGYNAAIVKSLLN-GII 365
Query: 88 VEVVKEYEN-----WRQIRDFDGTIGWINKSLLS 116
VEV+ + W +IR DG GWI ++LL+
Sbjct: 366 VEVLSDVATADGATWVKIRTADGVEGWIVRNLLA 399
>gi|145630990|ref|ZP_01786766.1| hypothetical protein CGSHi22421_03753 [Haemophilus influenzae
R3021]
gi|144983457|gb|EDJ90933.1| hypothetical protein CGSHi22421_03753 [Haemophilus influenzae
R3021]
Length = 203
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LSG S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSGTPSS 89
>gi|119492417|ref|ZP_01623738.1| acetyl-coenzyme A synthetase [Lyngbya sp. PCC 8106]
gi|119453083|gb|EAW34252.1| acetyl-coenzyme A synthetase [Lyngbya sp. PCC 8106]
Length = 170
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLP---- 87
F ++ ++ +V + N R P + +G+P
Sbjct: 6 FIPLILMTTLTATPALSQQQCNIYVIYDRNDTFVNVRTAPNGN-------IIRGIPNGSK 58
Query: 88 VEVVKEYENWRQIRD---FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
V+ E W ++ FD G++ K LL RS + + Y+NL + P
Sbjct: 59 TSVIGEESGWYKVNFDSRFDDITGFMKKELL--WRS---TRDYAMDSKDTYVNLRESP-- 111
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTE---GWIKKQKI 184
++ +V G LT I +W D G++ +
Sbjct: 112 NGSVIRQVRNGTPLTFIEGNRNQWLKVRLEDGSATVGYMYAPMV 155
>gi|159900114|ref|YP_001546361.1| SH3 type 3 domain-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|159893153|gb|ABX06233.1| SH3 type 3 domain protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 406
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSG 117
+ + N R PG V T + G+ V ++ + W +I+ +G+ GW+ +L+
Sbjct: 338 VAFNGGNVRSAPGGD---VLTQVDAGVNVSLINRSSDSAWFKIKLPNGSEGWVVGQILTI 394
Query: 118 KRSAI 122
+ +
Sbjct: 395 NPAVL 399
>gi|291618935|ref|YP_003521677.1| YgiM [Pantoea ananatis LMG 20103]
gi|291153965|gb|ADD78549.1| YgiM [Pantoea ananatis LMG 20103]
Length = 206
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTK 84
I I LA +H E R+V+ + R GPG + ++ L
Sbjct: 4 ITLAGITLLALSTLAPAHADEK-------RYVS---DELSTWVRSGPGDQFRLLGK-LNA 52
Query: 85 GLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRS 120
G V++++ + + Q+RD +G WI S LS S
Sbjct: 53 GEQVQLLQTNDATKYGQVRDAEGRTVWIPLSQLSENPS 90
>gi|308270595|emb|CBX27207.1| hypothetical protein N47_A12360 [uncultured Desulfobacterium sp.]
Length = 256
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ SG + I+S +R N+ PD + ++ K+ G ++ W
Sbjct: 173 WMITGASSGLKWYILSTDDRAVILEKETNILAGPDAKDTVLFKLHEGTVVHHERSEEGWS 232
Query: 169 FGYNLD-TEGWIKKQKI 184
D GWIK +
Sbjct: 233 LISLPDKKRGWIKDGAL 249
>gi|254281592|ref|ZP_04956560.1| SH3, type 3 domain protein [gamma proteobacterium NOR51-B]
gi|219677795|gb|EED34144.1| SH3, type 3 domain protein [gamma proteobacterium NOR51-B]
Length = 232
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 13/97 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
A+ +A + + + +K +P R G G Y +V + G
Sbjct: 13 TIVGALLALMASGVLAQETQYVSDKVLVP-----------VRSGAGSEYRIVHRGIPSGT 61
Query: 87 PVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ V E E W +I GT GW+ L A
Sbjct: 62 ALTVFSTTEDEVWSEIETRGGTRGWVRTQYLQEAPPA 98
>gi|219856222|ref|YP_002473344.1| hypothetical protein CKR_2879 [Clostridium kluyveri NBRC 12016]
gi|219569946|dbj|BAH07930.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 258
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ + A N R GPG Y + T + K ++ NW I + GWIN +
Sbjct: 200 EWIIVTADVLNVRDGPGESYGIRGT-VKKDECYKIGSIQGNWADIY-WSNHGGWINTDYV 257
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 16/53 (30%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V+ I G W Y + GWI +
Sbjct: 205 TADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWINTDYV 257
>gi|153955862|ref|YP_001396627.1| hypothetical protein CKL_3253 [Clostridium kluyveri DSM 555]
gi|146348720|gb|EDK35256.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 251
Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ + A N R GPG Y + T + K ++ NW I + GWIN +
Sbjct: 193 EWIIVTADVLNVRDGPGESYGIRGT-VKKDECYKIGSIQGNWADIY-WSNHGGWINTDYV 250
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 16/53 (30%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V+ I G W Y + GWI +
Sbjct: 198 TADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWINTDYV 250
>gi|289679054|ref|ZP_06499944.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
syringae FF5]
Length = 177
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R GP + +V T L G VE++ + Q+R G+ WI S L
Sbjct: 10 VRSGPTDDHRIVGT-LKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 57
>gi|170754338|ref|YP_001782100.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
gi|169119550|gb|ACA43386.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
Length = 255
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 11/76 (14%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
WIN L GK I N P +N+ +K S I+ + G + + G+W
Sbjct: 189 WIN---LDGKTGTI--------NTPSGVNIREKKSTSSKILGALPNGAKVQLYRKEGDWI 237
Query: 169 FGYNLDTEGWIKKQKI 184
Y G+I + +
Sbjct: 238 HIYYPQHGGYIYGKYV 253
>gi|209528388|ref|ZP_03276832.1| CHAP domain containing protein [Arthrospira maxima CS-328]
gi|209491175|gb|EDZ91586.1| CHAP domain containing protein [Arthrospira maxima CS-328]
Length = 572
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 39/132 (29%), Gaps = 23/132 (17%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY----------LTKG- 85
P + S + + F N R GPG ++V + + +G
Sbjct: 404 VPGVLASTPSPLPTQPSTSAFRGTVDGALNIRSGPGTNNSIVGSLSPGHSRTFDAVARGT 463
Query: 86 --LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+ W +I+ T W++ S ++G +N+ P
Sbjct: 464 MHWDAREQRNDNRWFRIQ---NTNQWVSASFITGNP-------LFTGAADTTLNIRSGPG 513
Query: 144 IQSIIVAKVEPG 155
+V + G
Sbjct: 514 TNFSVVGSLSNG 525
>gi|226949562|ref|YP_002804653.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842466|gb|ACO85132.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 253
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
WIN L GK I N P +N+ +K S I+ + G + +
Sbjct: 183 NNDSWIN---LDGKTGTI--------NTPSGVNIREKKSTSSRILGALPNGAKVNLYRKE 231
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 232 GDWMHIYYPPHGGYVYAKYI 251
>gi|331701607|ref|YP_004398566.1| NLP/P60 protein [Lactobacillus buchneri NRRL B-30929]
gi|329128950|gb|AEB73503.1| NLP/P60 protein [Lactobacillus buchneri NRRL B-30929]
Length = 296
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 13/105 (12%)
Query: 89 EVVKEY--ENWRQI--------RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
EV+ ++ +W ++ D G GW+ LLS ++ + + NL
Sbjct: 62 EVIIDHFDGDWAKVYIPSQRDDSDSRGYPGWVPSKLLSDQQISYPPVTSIVRIAVRTANL 121
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
Y D V ++ G +L SG++ +G+I K
Sbjct: 122 Y---DENKKPVLEISLGTVLPQTGTSGDYIAVVTPLGKGFIDKSA 163
>gi|228942646|ref|ZP_04105177.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975751|ref|ZP_04136286.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228783926|gb|EEM31970.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228816986|gb|EEM63080.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326943750|gb|AEA19642.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 352
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
N R GP Y V+ L KG +V + +W + G WI
Sbjct: 221 VNLRSGPSTNYGVI-RQLNKGEAYQVWGKQGDWLNL----GGNQWIY 262
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+V + + +NL P ++ ++ G + G+W + WI
Sbjct: 207 VVGETGVAYIDGLNVNLRSGPSTNYGVIRQLNKGEAYQVWGKQGDW--LNLGGNQ-WIY 262
>gi|168179506|ref|ZP_02614170.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
gi|182669721|gb|EDT81697.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
Length = 259
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
WIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 NTAWIN---LDGKTGTICTPSG--------VNVRENKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSRYI 254
>gi|256546126|ref|ZP_05473479.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398243|gb|EEU11867.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 164
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ ++ + S IVA ++PG + E GEW + +G+I + +
Sbjct: 109 KDISNIRRQTNTDSEIVATIQPGTQIERSEIVGEWSKVSYGEYQGYILTELL 160
>gi|229182201|ref|ZP_04309484.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
gi|228601303|gb|EEK58841.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
Length = 352
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
N R GP Y V+ L KG +V + +W + G WI
Sbjct: 221 VNLRSGPSTNYGVI-RQLNKGEAYQVWGKQGDWLNL----GGNQWIY 262
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+V + + +NL P ++ ++ G + G+W + WI
Sbjct: 207 VVGETGVAYIDGLNVNLRSGPSTNYGVIRQLNKGEAYQVWGKQGDW--LNLGGNQ-WIY 262
>gi|225387184|ref|ZP_03756948.1| hypothetical protein CLOSTASPAR_00936 [Clostridium asparagiforme
DSM 15981]
gi|225046732|gb|EEG56978.1| hypothetical protein CLOSTASPAR_00936 [Clostridium asparagiforme
DSM 15981]
Length = 482
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVC-TYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSL 114
V+ N R V Y + V E W +IR G+I
Sbjct: 108 VSKVNGYVNIRTEANTTSGVTGKIYNDSAATILDTVDGEGGKWYKIR-SGSVTGYIKADY 166
Query: 115 L-----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ V + L K PD+ S + + G + E G++
Sbjct: 167 FVTGAEAESKAKQVGTRYGTVVGTPTLRLRKSPDLTSQTLTLLAEGAHYVVLEEQGDFLK 226
Query: 170 GYNL-DTEGWIKKQKI 184
D EG++ K +
Sbjct: 227 VAVDSDLEGYVFKDYM 242
>gi|164687490|ref|ZP_02211518.1| hypothetical protein CLOBAR_01131 [Clostridium bartlettii DSM
16795]
gi|164603264|gb|EDQ96729.1| hypothetical protein CLOBAR_01131 [Clostridium bartlettii DSM
16795]
Length = 524
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + D D I I+++++ G S+ V R N+ + + +S V KVE +
Sbjct: 363 RLVYDKDNIITMISRNVVEGISSS-VYESERGCVKANLANVRRTANKESKSVGKVEKYDV 421
Query: 158 LTIR----ECSG-EWCFGYNLDTEGWIKKQKI 184
+ + E G W +D +GWI I
Sbjct: 422 VYLTGKSYERDGKTWYELEMIDGKGWISGSVI 453
>gi|324327052|gb|ADY22312.1| S-layer domain protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 604
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G W+N T
Sbjct: 300 PSRTGYVVGKYPPQ--TVTVVEENSIWLKIRTSEGLQ-WMN-------PYLKEGEGKELT 349
Query: 131 NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P+ S I K P G + + W WI +
Sbjct: 350 YIPRTFFAYDSPNFSSKISGKYAPQGGIEELAMGDDGWVQIRTDKGPKWINMSYL 404
>gi|303233538|ref|ZP_07320197.1| bacterial SH3 domain protein [Finegoldia magna BVS033A4]
gi|302495342|gb|EFL55089.1| bacterial SH3 domain protein [Finegoldia magna BVS033A4]
Length = 140
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGW 178
+ +NL + S IV K++ L + E + + W G+
Sbjct: 73 TGKKTMKVTTDILNLRSEASTNSSIVTKLKKDDELKVIEETKDDNSTTWVKVDFNGQVGF 132
Query: 179 IKKQKI 184
+ K+ +
Sbjct: 133 VSKEFL 138
>gi|30314069|gb|AAO47060.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 231
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 35 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 93
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 94 K-VASTPVTTTQEVKKEATTEQAAPAAETK 122
>gi|86359712|ref|YP_471603.1| hypothetical protein RHE_PA00007 [Rhizobium etli CFN 42]
gi|86283814|gb|ABC92876.1| hypothetical protein RHE_PA00007 [Rhizobium etli CFN 42]
Length = 640
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIK 180
I P + L P + I V V LL I E W GW+
Sbjct: 548 IAPPEPKFAYMKQPFQLRDGPGAKYIPVGAVGQNALLAILETESGWVHVSGGPSAMGWVP 607
Query: 181 KQKI 184
K+ +
Sbjct: 608 KELL 611
>gi|67924658|ref|ZP_00518067.1| Cell wall hydrolase/autolysin [Crocosphaera watsonii WH 8501]
gi|67853485|gb|EAM48835.1| Cell wall hydrolase/autolysin [Crocosphaera watsonii WH 8501]
Length = 589
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----- 112
V + A +R GP Y+ + T L KG V V+ + W Q+ D+ WI
Sbjct: 232 VEVTADAGVARTGPSTNYSRL-TPLPKGTTVSVIGQEGEWLQL-DY---GAWIKAQETRI 286
Query: 113 -SLLSGKRSAIVSPWNRKTNNPIYI 136
LS ++ I S K N +
Sbjct: 287 IPNLSSAKAIIKSAKFEKDNEETKV 311
>gi|227821341|ref|YP_002825311.1| hypothetical protein NGR_c07650 [Sinorhizobium fredii NGR234]
gi|227340340|gb|ACP24558.1| hypothetical protein NGR_c07650 [Sinorhizobium fredii NGR234]
Length = 261
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + V + G + I C + WC D GW+ Q +
Sbjct: 32 VNMRSGPSTRYPAVTIIPAGESVEIHGCLADRPWCDVSFYDGRGWVAGQYV 82
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R GP Y V T + G VE+ + W + +DG GW+ +
Sbjct: 32 VNMRSGPSTRYPAV-TIIPAGESVEIHGCLADRPWCDVSFYDG-RGWVAGQYV 82
>gi|210622241|ref|ZP_03293031.1| hypothetical protein CLOHIR_00978 [Clostridium hiranonis DSM 13275]
gi|210154375|gb|EEA85381.1| hypothetical protein CLOHIR_00978 [Clostridium hiranonis DSM 13275]
Length = 322
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
RD GT I + +G +S K + ++N+ K + +V K+ G +
Sbjct: 118 FRDVRGT---IYRFDANGVKS---KNKCGKVVDCDFLNVRDKASTKGKVVEKIYAGKFVE 171
Query: 160 IRECSGEWCFGYNL-DTEGWIKKQKIWGIYPGEV 192
I + SG W GW+ + PGE
Sbjct: 172 ILKTSGSWYQVKTESGKVGWVSSNYV--TIPGET 203
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R VV + G VE++K +W Q++ G +GW++ + ++
Sbjct: 143 VDCDFLNVRDKASTKGKVV-EKIYAGKFVEILKTSGSWYQVKTESGKVGWVSSNYVT 198
>gi|206974492|ref|ZP_03235408.1| S-layer domain protein [Bacillus cereus H3081.97]
gi|217960520|ref|YP_002339082.1| S-layer domain protein [Bacillus cereus AH187]
gi|206747135|gb|EDZ58526.1| S-layer domain protein [Bacillus cereus H3081.97]
gi|217066308|gb|ACJ80558.1| S-layer domain protein [Bacillus cereus AH187]
Length = 604
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G W+N T
Sbjct: 300 PSRTGYVVGKYPPQ--TVTVVEENSIWLKIRTSEGLQ-WMN-------PYLKEGEGKELT 349
Query: 131 NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P+ S I K P G + + W WI +
Sbjct: 350 YIPRTFFAYDSPNFSSKISGKYAPQGGIEELAMGDDGWVQIRTDKGPKWINMSYL 404
>gi|325663256|ref|ZP_08151706.1| hypothetical protein HMPREF0490_02447 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470710|gb|EGC73940.1| hypothetical protein HMPREF0490_02447 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 605
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T R G+ ++ T + KG V ++E +W+++R DG IG+I S L
Sbjct: 194 TTAKKDTQMRWLAGVKSDIL-TEVKKGDRVYFIEEEGDWKKVRTEDGIIGYIKSSALKSV 252
Query: 119 RSAIVSPWNRKTNNPIYINLYK 140
++ ++ ++ YK
Sbjct: 253 KTETITSSSKAPEYTSMTKDYK 274
>gi|229198986|ref|ZP_04325673.1| S-layer y domain protein [Bacillus cereus m1293]
gi|228584532|gb|EEK42663.1| S-layer y domain protein [Bacillus cereus m1293]
Length = 609
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 328 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 373
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + E G W + W+ + I
Sbjct: 374 VSGRYAPQTVEVYGERDGGWIQIQTSNGLKWVNEGNI 410
>gi|219870907|ref|YP_002475282.1| SH3 domain-containing protein [Haemophilus parasuis SH0165]
gi|219691111|gb|ACL32334.1| SH3 domain-containing protein [Haemophilus parasuis SH0165]
Length = 202
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + + I + + + + E R GPG + + +
Sbjct: 1 MQKHISLFCSTLLLAISIPSFAQTQYVTENLNT-----------YLRKGPGDQFKISGS- 48
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ G V +++ + + IRD WI S L+ S+
Sbjct: 49 IQAGEKVTLIETRDRYSLIRDGKNREAWILNSELTSTPSS 88
>gi|29378449|gb|AAO83926.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 46 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGXYLTD 104
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 105 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 136
>gi|222096579|ref|YP_002530636.1| s-layer-like domain protein [Bacillus cereus Q1]
gi|229139718|ref|ZP_04268288.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
BDRD-ST26]
gi|221240637|gb|ACM13347.1| S-layer-like domain protein [Bacillus cereus Q1]
gi|228643849|gb|EEL00111.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
BDRD-ST26]
Length = 597
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G W+N T
Sbjct: 293 PSRTGYVVGKYPPQ--TVTVVEENSIWLKIRTSEGLQ-WMN-------PYLKEGEGKELT 342
Query: 131 NNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P+ S I K P G + + W WI +
Sbjct: 343 YIPRTFFAYDSPNFSSKISGKYAPQGGIEELAMGDDGWVQIRTDKGPKWINMSYL 397
>gi|331086810|ref|ZP_08335887.1| hypothetical protein HMPREF0987_02190 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409976|gb|EGG89411.1| hypothetical protein HMPREF0987_02190 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 605
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T R G+ ++ T + KG V ++E +W+++R DG IG+I S L
Sbjct: 194 TTAKKDTQMRWLAGVKSDIL-TEVKKGDRVYFIEEEGDWKKVRTEDGIIGYIKSSALKSV 252
Query: 119 RSAIVSPWNRKTNNPIYINLYK 140
++ ++ ++ YK
Sbjct: 253 KTETITSSSKAPEYTSMTKDYK 274
>gi|326437581|gb|EGD83151.1| hypothetical protein PTSG_03783 [Salpingoeca sp. ATCC 50818]
Length = 891
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIK 180
IV +K + + + ++ + G ++T+ R+ WC +GW
Sbjct: 497 IVIDPAKKKQQMVALYDHASSTHGGSVLLGFKKGDVMTLIRKRDDGWCKVVKGSEQGWAP 556
Query: 181 KQKI 184
+
Sbjct: 557 TSYL 560
>gi|254167746|ref|ZP_04874596.1| Glycosyl hydrolases family 25, putative [Aciduliprofundum boonei
T469]
gi|289597089|ref|YP_003483785.1| glycoside hydrolase family 25 [Aciduliprofundum boonei T469]
gi|197623274|gb|EDY35839.1| Glycosyl hydrolases family 25, putative [Aciduliprofundum boonei
T469]
gi|289534876|gb|ADD09223.1| glycoside hydrolase family 25 [Aciduliprofundum boonei T469]
Length = 574
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 20/133 (15%)
Query: 60 IKASRANSRIGPGIMYTVVCT------YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ A+ N R GP Y ++ T ++ + W Q +D +GW
Sbjct: 416 VTATALNIRTGPSTSYGIIGTVPENQEFVAYNY--SIDSSGRKWWQF-FYDDRVGWCAAW 472
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------W 167
+ + N +++ + I+ V G+L + W
Sbjct: 473 Y-----TEMAYSDIFVVNVSSSLHVRSGAGTSNTILGSVYDGMLFAKKGQKYNSDEDITW 527
Query: 168 CFGYNLDTEGWIK 180
Y + WI
Sbjct: 528 YEIYWENKSAWIA 540
>gi|125975376|ref|YP_001039286.1| glycoside hydrolase family protein [Clostridium thermocellum ATCC
27405]
gi|256005477|ref|ZP_05430439.1| glycoside hydrolase family 18 [Clostridium thermocellum DSM 2360]
gi|281419337|ref|ZP_06250352.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|125715601|gb|ABN54093.1| glycoside hydrolase, family 18 [Clostridium thermocellum ATCC
27405]
gi|255990532|gb|EEU00652.1| glycoside hydrolase family 18 [Clostridium thermocellum DSM 2360]
gi|281406957|gb|EFB37220.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|316939491|gb|ADU73525.1| glycoside hydrolase family 18 [Clostridium thermocellum DSM 1313]
Length = 583
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 63 SRANSRIGPGIMYTVVCTY-LTKGLP----VEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
A R G I ++ + L+ G + + +EY+ W ++R +DG IG+I K +
Sbjct: 170 PEAVVRKGRSIREPIIRKFDLSSGDTAENTLRIFEEYDKWYKVRTWDGAIGYIEKRFVVV 229
Query: 118 KRSAIVSPWNRKTNNP 133
K+ + + KT P
Sbjct: 230 KKLMVEKISDDKTPKP 245
>gi|237752666|ref|ZP_04583146.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376155|gb|EEO26246.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 392
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHE---KEIFEKKPLPRFVTIKAS---RANS--RIGPG 72
Q SL+ AI F+ + +F + F+T+K+ +AN RI P
Sbjct: 289 FFQISLVVFFAILFFGLYLYKRKTIFILLGVFALVLVLYFLTLKSDVTIKANVALRIQPT 348
Query: 73 IMYTVVCTYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINK 112
T+V T P+ E++ E ++ ++ D IGW+ K
Sbjct: 349 FNSTIVLTTQK---PIRAEILGERNSYYKVMLEDERIGWVKK 387
>gi|229141551|ref|ZP_04270085.1| S-layer y domain protein [Bacillus cereus BDRD-ST26]
gi|228641951|gb|EEK98248.1| S-layer y domain protein [Bacillus cereus BDRD-ST26]
Length = 503
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V VV+E W +IR + G + L + K Y P S
Sbjct: 222 VTVVEERGTWLRIRTYAG-----YQWLDTKK---------EAKYLSKVFFAYDSPSFVSR 267
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + E G W + W+ + I
Sbjct: 268 VSGRYAPQTVEVYGERDGGWIQIQTSNGLKWVNEGNI 304
>gi|328951960|ref|YP_004369294.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452284|gb|AEB08113.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 165
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ PD S V G L + + +GEW +GW+ +Q
Sbjct: 37 TQSRQEIFSSPDFASPSVVTAPEGAELMVIQQAGEWYQVEYQGKKGWVHQQA 88
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+G + V+++ W Q+ + G GW+++ P +RK + +
Sbjct: 55 VTAPEGAELMVIQQAGEWYQVE-YQGKKGWVHQQ---------AFPSSRKFDLTTILRGR 104
Query: 140 KKPDIQSIIVAKVEPG 155
+ ++ VA G
Sbjct: 105 AVQETKTDEVALASKG 120
>gi|222151516|ref|YP_002560672.1| N-acetylmuramoyl-L-alanine amidase homolog [Macrococcus
caseolyticus JCSC5402]
gi|222120641|dbj|BAH17976.1| N-acetylmuramoyl-L-alanine amidase homolog [Macrococcus
caseolyticus JCSC5402]
Length = 281
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L P+ + KV+ G I + +W F N + +GW+
Sbjct: 48 LRTGPNAMYPEIFKVKKGESFKILKQDKKWFFVQNDEKKGWVA 90
>gi|212633684|ref|YP_002310209.1| SH3-like region [Shewanella piezotolerans WP3]
gi|212555168|gb|ACJ27622.1| SH3-like region [Shewanella piezotolerans WP3]
Length = 225
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGK 118
GPG + ++ + + G V + ++ +I D G GW+ +LS K
Sbjct: 58 IYLHGGPGTQFRILGS-VEAGQKVTSLGGAQGDYSKIIDHKGREGWVQTKMLSAK 111
>gi|126651545|ref|ZP_01723748.1| putative deacetylase [Bacillus sp. B14905]
gi|126591494|gb|EAZ85600.1| putative deacetylase [Bacillus sp. B14905]
Length = 422
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
L+ G+ SA + +Y++P S + +V G L + + S W
Sbjct: 19 LMVGQLSASAEGSVKIQKINKDAVIYEEPSTNSAEIGEVAKGSFLKVTQASKGWTHIQTP 78
Query: 174 DTEGWIKKQKI 184
+ G++ +
Sbjct: 79 ELAGYVTSDVL 89
>gi|257466945|ref|ZP_05631256.1| hypothetical protein FgonA2_05855 [Fusobacterium gonidiaformans
ATCC 25563]
Length = 384
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKG-LPV--EVVKEYENWRQIRDFDGTIGWINKS 113
+V + + AN R PG+ ++ Y LP+ ++ + W ++R G G+I S
Sbjct: 54 YVFVSSRTANIRDYPGMEGNIIEKYSYNDKLPLLEKIYVKGNYWYKVRTLKGNEGYIAAS 113
Query: 114 LLSGKRSA 121
+S KR+
Sbjct: 114 -VSKKRNF 120
>gi|29378483|gb|AAO83943.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 461
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 65 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 123
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
K S V+P + ++ + ++
Sbjct: 124 KVASTPVAPTQEVKKETTTQQAAPAAETKTEVKQTIQA 161
>gi|296387288|ref|ZP_06876787.1| SH3 type 3 domain-containing protein [Pseudomonas aeruginosa PAb1]
Length = 177
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R GP Y +V T LT G VE++ N+ Q+R +G+ WI L
Sbjct: 9 VRSGPTDGYRIVGT-LTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 56
>gi|294782095|ref|ZP_06747421.1| bacterial SH3 domain protein [Fusobacterium sp. 1_1_41FAA]
gi|294480736|gb|EFG28511.1| bacterial SH3 domain protein [Fusobacterium sp. 1_1_41FAA]
Length = 399
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 57 FVTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS 113
+V + A AN R P V+ TY K +E V+ N W + D G G+I S
Sbjct: 67 YVFVTARSANLREKPDPKAKVIGKFTYDVKLKLLEKVRYQGNIWYLVEDAKGNRGYIAGS 126
Query: 114 LLSGK 118
+
Sbjct: 127 QTKKR 131
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGEWCFGY-NLDTEGWIKKQK 183
NL +KPD ++ ++ K V L + E W G+I +
Sbjct: 71 TARSANLREKPDPKAKVIGKFTYDVKLKLLEKVRYQGNIWYLVEDAKGNRGYIAGSQ 127
>gi|228918816|ref|ZP_04082214.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228840888|gb|EEM86132.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 943
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
+VT++++ P + + + G +EV+ + W Q++ + G +G++ +S+
Sbjct: 125 WVTLRSAVKRIYPKPETKFLLKSKSVKDGDVLEVISKQGLWYQVK-YQGEVGYVRIFESV 183
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ I +K P+ + L + +W
Sbjct: 184 VIGESPVRSWDVTKEATNLSHFIITEYHKDPEKYFPPNIQKKFDKQLDSDLALLANGLKW 243
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 244 IDQLKEALYLDNKQGWVQEEGKW 266
>gi|240143481|ref|ZP_04742082.1| spore cortex-lytic enzyme prepeptide peptodoglycan-binding domain
protein [Roseburia intestinalis L1-82]
gi|257204515|gb|EEV02800.1| spore cortex-lytic enzyme prepeptide peptodoglycan-binding domain
protein [Roseburia intestinalis L1-82]
Length = 472
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 21/50 (42%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ ++ + D + I+ K+ G + + E W + D +G++
Sbjct: 183 ADVDEFLYVRASGDADAEIIGKLYKGDVADVVESGDTWTHVVSGDVDGYV 232
>gi|29378557|gb|AAO83980.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 479
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|317057440|ref|YP_004105907.1| SH3 type 3 domain-containing protein [Ruminococcus albus 7]
gi|315449709|gb|ADU23273.1| SH3 type 3 domain protein [Ruminococcus albus 7]
Length = 240
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWINK 112
VT + N R GP Y + T + G V + E W ++GT GW+ +
Sbjct: 178 VTSDTTYLNLRYGPSKDYDIKTT-IPDGYSVLGIGETVGPDGNVWVYTS-YNGTFGWVMR 235
Query: 113 SLLS 116
LL
Sbjct: 236 ELLG 239
>gi|29378537|gb|AAO83970.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|306843682|ref|ZP_07476282.1| SH3 type 3 domain protein [Brucella sp. BO1]
gi|306275992|gb|EFM57701.1| SH3 type 3 domain protein [Brucella sp. BO1]
Length = 170
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 29 TNLNIRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 81
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 41/126 (32%), Gaps = 15/126 (11%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R GPG Y V + G PV V W Q+ + GW + L+ + +
Sbjct: 32 NIRTGPGTGYAAVGA-IPSGAPVNVRGCTSGYGWCQVS-YGNMFGWASSRYLAMREGSAS 89
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGWIK 180
+ I + ++A V G L R G W + GW
Sbjct: 90 GYSDDFGQTAALIGI--------PLIAGVAIGAALNDRHDRWDHGYWHRHRHWGRSGWRG 141
Query: 181 KQKIWG 186
+ WG
Sbjct: 142 DRPHWG 147
>gi|291542484|emb|CBL15594.1| N-acetylmuramoyl-L-alanine amidase [Ruminococcus bromii L2-63]
Length = 259
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 41 ALSHEKEIFEKKPLPRFVT--IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-- 96
A S + K R++ ++ N R GPG Y V + KG +V E
Sbjct: 178 AGSDSSKAGSDKAFRRYIVRITSSNGVNIRKGPGTNYDVNGA-VPKGGAYTIVDEKSGAG 236
Query: 97 ---WRQIRDFDGTIGWINKSLLSGKR 119
W +++ GWI R
Sbjct: 237 AAKWGKLK---SGAGWIALDYTEKIR 259
>gi|313620611|gb|EFR91931.1| NLP/P60 family protein [Listeria innocua FSL S4-378]
Length = 238
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 7/109 (6%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+Y +R + + F L +L L + + N R
Sbjct: 4 VYKKGVRGLKIIAARRKIFFALIALMISFSVLFLPTNSASAATT----YKMTTTADVNVR 59
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
V+ Y KG V + NW + ++G +G+++ L+
Sbjct: 60 TADNTSGKVIGFY-KKGTTVTFTAKTKNNWYKTT-YNGKVGYVSGKCLT 106
>gi|119485813|ref|XP_001262249.1| hypothetical protein NFIA_099880 [Neosartorya fischeri NRRL 181]
gi|119410405|gb|EAW20352.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 250
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 11/76 (14%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
P++ALS + P I N R GPG + VV +Y KG V +V +
Sbjct: 1 MLYLPLVALSFATTLVSAYP------ITGDGVNCRSGPGTNHPVVKSY-PKGHDVSIVCQ 53
Query: 94 YENWRQIRDFDGTIGW 109
D G W
Sbjct: 54 APG----TDVKGDKLW 65
>gi|30314071|gb|AAO47061.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314073|gb|AAO47062.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314075|gb|AAO47063.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 228
Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 32 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 90
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 91 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 122
>gi|256828438|ref|YP_003157166.1| SH3 type 3 domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577614|gb|ACU88750.1| SH3 type 3 domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 382
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTE 176
RS + +R +N+ P+ ++A+V+ L + + W D
Sbjct: 308 RSHAANRPDRVEVIIDLLNVRYGPEASEEVIAQVDRYTTLRVLGSAPGWLYVEVEGDDLR 367
Query: 177 GWIKKQKI 184
GW+ + +
Sbjct: 368 GWVMDRYV 375
>gi|161509857|ref|YP_001575516.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257793705|ref|ZP_05642684.1| cell wall amidase lytH [Staphylococcus aureus A9781]
gi|258420203|ref|ZP_05683158.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus A9719]
gi|160368666|gb|ABX29637.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257787677|gb|EEV26017.1| cell wall amidase lytH [Staphylococcus aureus A9781]
gi|257843914|gb|EEV68308.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus A9719]
gi|269941117|emb|CBI49503.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus TW20]
Length = 291
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 107 IGWINKSLLSGKRSAIV------------------SPWNRKTNNPIYINLYKKPDIQSII 148
W++K L KR+ IV S + L P+ +
Sbjct: 5 EAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYSV 64
Query: 149 VAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ KVE G G+W + + +GWI
Sbjct: 65 IYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIA 98
>gi|229173920|ref|ZP_04301458.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus MM3]
gi|228609558|gb|EEK66842.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus MM3]
Length = 591
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + V +KG +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGAGLEHQTV-RKASKGDRYKVLAVKNGWYKV----GNGEWIFYN 398
>gi|332879900|ref|ZP_08447585.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682111|gb|EGJ55023.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 249
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
S L ++ + F+L + F I + + ++ ++ +
Sbjct: 143 SFLLYYFVERTALKRTFFSLMLVFLFFAIGSYTLAHFCHKQVSQTQYAILFDKTVRVFSD 202
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
Y+ L +G VE++++ ++W +IR +G GW S L
Sbjct: 203 AN-AYSSEVMQLHEGTKVEIIEDAKDWVKIRLVNGKTGWTKVSCLRK 248
>gi|290892782|ref|ZP_06555773.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
gi|290557594|gb|EFD91117.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
Length = 472
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 86 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 144
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 145 K-VASTPVTTTQEVKKEATTEQAAPAAETK 173
>gi|167760277|ref|ZP_02432404.1| hypothetical protein CLOSCI_02650 [Clostridium scindens ATCC 35704]
gi|167662160|gb|EDS06290.1| hypothetical protein CLOSCI_02650 [Clostridium scindens ATCC 35704]
Length = 543
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TIK R G+ ++ K V +V+ ENW+++R DG IG++ L
Sbjct: 132 ATIKRDT-QVRYQGGVKSPILTEVSKKDE-VTIVESEENWKKVRTKDGFIGYVRNKDLKN 189
Query: 118 KRSAIVS 124
+ + +S
Sbjct: 190 EETKTIS 196
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 116 SGKRSAIVSPWNRKTNN--PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ R IVS W + T + + ++S I+ +V +TI E W
Sbjct: 116 NPSRVMIVSDWGKTTVATIKRDTQVRYQGGVKSPILTEVSKKDEVTIVESEENWKKVRTK 175
Query: 173 LDTEGWIKKQKI 184
G+++ + +
Sbjct: 176 DGFIGYVRNKDL 187
>gi|146307509|ref|YP_001187974.1| hypothetical protein Pmen_2486 [Pseudomonas mendocina ymp]
gi|145575710|gb|ABP85242.1| hypothetical protein Pmen_2486 [Pseudomonas mendocina ymp]
Length = 270
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQKIWGI 187
L+++PD S A + G + + E G W +G W+ + +G+
Sbjct: 214 LHERPDEASRTRAYLIEGDVCEVLEQQGNWLLIRYASRKGPLQRWVSLDEAYGL 267
>gi|66737332|gb|AAY54612.1| Iap [Listeria monocytogenes]
gi|307570120|emb|CAR83299.1| cell wall hydrolases A [Listeria monocytogenes L99]
Length = 472
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 86 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 144
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 145 K-VASTPVTTTQEVKKEATTEQAAPAAETK 173
>gi|29378419|gb|AAO83911.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 472
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 86 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 144
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 145 K-VASTPVTTTQEVKKEATTEQAAPAAETK 173
>gi|332162993|ref|YP_004299570.1| putative signal transduction protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318604182|emb|CBY25680.1| arylsulfatase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325667223|gb|ADZ43867.1| putative signal transduction protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330862252|emb|CBX72413.1| uncharacterized protein ygiM [Yersinia enterocolitica W22703]
Length = 189
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKS 113
R+++ + GPG Y +V T L G V ++ + N+ QIRD G WI
Sbjct: 9 RYISDELDT-YVHSGPGNQYRIVGT-LKGGDEVTLISVNDGTNYGQIRDSKGKTTWIPLD 66
Query: 114 LLSGKRSAIVSPWNRKTNNPIYIN 137
LS S V + + +
Sbjct: 67 QLSETPSLRVRVPDLEQQVKTLTD 90
>gi|326335616|ref|ZP_08201803.1| NLP/P60 family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692382|gb|EGD34334.1| NLP/P60 family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 258
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ L ++ +S ++++ G L I + G W + + EGW+ +++
Sbjct: 10 VPLREESSHKSEQISQLLYGELCFIIKQEGGWYYIRTDYDNYEGWVDSKQL 60
>gi|124005372|ref|ZP_01690213.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123989194|gb|EAY28772.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 572
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
L +K+ KK + + AS N R G G + + G + +++ W
Sbjct: 362 ALLGGQKKQPSSKKGI-----VTASSLNVRKGAGANFGKNGKAIKNGAEITILETKNGWH 416
Query: 99 QIRDFDGTIGWINKSLLSGKRS 120
+I G W++ +S ++
Sbjct: 417 RI----GDHRWVSAKYVSLVKT 434
>gi|331085716|ref|ZP_08334799.1| hypothetical protein HMPREF0987_01102 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406639|gb|EGG86144.1| hypothetical protein HMPREF0987_01102 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 320
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY------ENWRQIRDFDGTIG 108
P V + A+ N R GPG Y + KG+ + +E W +++ +G
Sbjct: 255 PYLVEVTATDLNIRKGPGTNYGKTGKFTGKGV-FTITEERAGTGSNRGWGKLK---SGVG 310
Query: 109 WIN 111
WI+
Sbjct: 311 WIS 313
>gi|298372688|ref|ZP_06982678.1| aerotolerance-related exported protein [Bacteroidetes oral taxon
274 str. F0058]
gi|298275592|gb|EFI17143.1| aerotolerance-related exported protein [Bacteroidetes oral taxon
274 str. F0058]
Length = 250
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ + L++ F + ++ E++ P + + + + P I + L
Sbjct: 160 SFYVGLLSMIFSIISLIYAFTERQYLVDNP---YAIVMEGSVSVKASPSITGKEIFL-LH 215
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+G V+VV W++I D +GW+ ++ + G
Sbjct: 216 EGTKVKVVDSQNRWKKIEIADKRVGWVPQNTVEG 249
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ L AIV + +++ P I + + G + + + W
Sbjct: 181 ERQYLVDNPYAIVMEGS--------VSVKASPSITGKEIFLLHEGTKVKVVDSQNRWKKI 232
Query: 171 YNLDTE-GWIKKQKIWGI 187
D GW+ + + GI
Sbjct: 233 EIADKRVGWVPQNTVEGI 250
>gi|29378417|gb|AAO83910.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 452
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 66 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 124
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 125 K-VASTPVTTTQEVKKEATTEQAAPAAETK 153
>gi|297586940|ref|ZP_06945585.1| enterotoxin/cell-wall binding protein [Finegoldia magna ATCC 53516]
gi|297574921|gb|EFH93640.1| enterotoxin/cell-wall binding protein [Finegoldia magna ATCC 53516]
Length = 140
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGW 178
+ +N+ + S IV K++ L + E + + W G+
Sbjct: 73 TEKKTMKVTTDVLNMRSEASTNSSIVTKLKKDDELKVIEETKDDDGATWVKVDFNGQVGF 132
Query: 179 IKKQKI 184
+ K+ +
Sbjct: 133 VSKEFL 138
>gi|269925555|ref|YP_003322178.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789215|gb|ACZ41356.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
Length = 232
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ L LA+ + +S E +P + T A+ N R GP Y
Sbjct: 1 MIRKILGLFLALVVAFVSLSFVSPTSEAAYVRP-GSYATTTAN-LNLRSGPSTYY----- 53
Query: 81 YLTKGLP----VEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y+ + +P V V+ N W ++R + GT+G+++ L + + + +
Sbjct: 54 YVKRVIPYGGRVYVLSGPYNRYWYKVR-WSGTVGYVHGYYLRSGSTVRTTSYYYSSKGQA 112
Query: 135 YINLYKK 141
N K+
Sbjct: 113 IANTAKR 119
>gi|209522951|ref|ZP_03271508.1| SH3 type 3 domain protein [Arthrospira maxima CS-328]
gi|209496538|gb|EDZ96836.1| SH3 type 3 domain protein [Arthrospira maxima CS-328]
Length = 98
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L ++ + + I + P A ++ +F + P S+ N R GPG Y++
Sbjct: 4 KKLLLSAGLSMVMIAAAVVP--AWAYPARLFARDP--------GSQINIRSGPGTNYSIA 53
Query: 79 CTYLTKGLPVEVVKEY----ENWRQIRDFDG-TIGWINKSLLS 116
Y G V+V+ E W + GW+ ++
Sbjct: 54 -HYGYAGDYVDVINERVVGGYRWYYVEFPASKARGWVRGDFIT 95
>gi|76253912|ref|NP_001029000.1| neutrophil cytosolic factor 1 [Ciona intestinalis]
gi|67513952|dbj|BAD99568.1| neutrophil cytosolic factor 1 [Ciona intestinalis]
Length = 461
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G VEVV++ E W + + G+ GW+ + L G +V+ +
Sbjct: 173 LHSGETVEVVEKSESGWWLVCNTYGSNGWVPGAYLEKEDGSEEDLVTEK-AAVGQGTWYV 231
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
D S G L + + + W EGW+ +
Sbjct: 232 ATSHYDATSNDEISFPMGAALEVLQVNLEGWWLARYNSNEGWVPGSYL 279
>gi|332298606|ref|YP_004440528.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181709|gb|AEE17397.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 230
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG----------LPVEVV 91
L H K PL + + SR R P + +L KG P E+
Sbjct: 145 LRHRISGPAKIPLQNAI-LSDSRVRIRTKPNLQSDT-WGFLNKGDRVEIKDKSDEPFEIN 202
Query: 92 KEYENWRQIRDFDG-TIGWINKSLLS 116
E W ++ D +G GW+ L
Sbjct: 203 GEKWYWYKV-DAEGYPDGWVYGKYLD 227
>gi|29378539|gb|AAO83971.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|315645112|ref|ZP_07898238.1| NLP/P60 protein [Paenibacillus vortex V453]
gi|315279533|gb|EFU42838.1| NLP/P60 protein [Paenibacillus vortex V453]
Length = 269
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ +S R P VV + KG V+++ W +I+ G G+ + L++
Sbjct: 34 VASSNVYMRSQPSTSGKVV-DRVYKGDSVQILGSSSGWYKIKTSSGKQGYASSKLIT 89
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
SA + K + + +P +V +V G + I S W + +G+
Sbjct: 23 SAATAQSVTKGVASSNVYMRSQPSTSGKVVDRVYKGDSVQILGSSSGWYKIKTSSGKQGY 82
Query: 179 IKKQKI 184
+ I
Sbjct: 83 ASSKLI 88
>gi|30314067|gb|AAO47059.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314087|gb|AAO47069.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 33 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 91
Query: 118 K 118
K
Sbjct: 92 K 92
>gi|332715981|ref|YP_004443447.1| hypothetical protein AGROH133_10833 [Agrobacterium sp. H13-3]
gi|325062666|gb|ADY66356.1| hypothetical protein AGROH133_10833 [Agrobacterium sp. H13-3]
Length = 225
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 38 PILALSHEKEIFEKKPL-PRFVTIKASRAN-----SRIGPGIMYTVVCTYLTKGLPVEVV 91
P + ++ P P F I+ N R P ++ L +G V+++
Sbjct: 54 PASPSATTSSPRDETPTSPNFTEIRTKLVNGNGVALRGAPNPKSQII-DRLDRGRKVDLL 112
Query: 92 KEYENWRQIRDF-DGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYI 136
+ W +++D GW+ L + KR I P K+ P +
Sbjct: 113 QSEAQWSRVKDVLTQKEGWVATRFLQDDNPKREEISKPAEPKSKPPPTL 161
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKK 181
+ K N + L P+ +S I+ +++ G + + + +W + EGW+
Sbjct: 75 TEIRTKLVNGNGVALRGAPNPKSQIIDRLDRGRKVDLLQSEAQWSRVKDVLTQKEGWVAT 134
Query: 182 QKI 184
+ +
Sbjct: 135 RFL 137
>gi|66968500|gb|AAY59629.1| invasion associated protein p60 [Listeria seeligeri]
Length = 522
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ ++V T L G V V E W +I +G G++N L
Sbjct: 82 SVSATWLNVRSGAGVDNSIV-TSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGKYLG- 139
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+A+ S + P Q+
Sbjct: 140 --NAVTSAPSATPEVKQEETTQAAPAQQTK 167
>gi|29378415|gb|AAO83909.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 451
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 65 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 123
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 124 K-VASTPVTTTQEVKKEATTEQAAPAAETK 152
>gi|217965324|ref|YP_002351002.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|217334594|gb|ACK40388.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
Length = 470
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A + P ++
Sbjct: 143 K-VASTPVTTTQEVKKEATTEQAAPAAETK 171
>gi|29378545|gb|AAO83974.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 62 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 120
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 121 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 152
>gi|29378535|gb|AAO83969.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|29378521|gb|AAO83962.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|29378561|gb|AAO83982.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|226223211|ref|YP_002757318.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes Clip81459]
gi|29378541|gb|AAO83972.1| invasion associated protein p60 [Listeria monocytogenes]
gi|225875673|emb|CAS04376.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|332311003|gb|EGJ24098.1| Protein p60 [Listeria monocytogenes str. Scott A]
Length = 477
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|227537911|ref|ZP_03967960.1| hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242213|gb|EEI92228.1| hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 409
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 59/156 (37%), Gaps = 15/156 (9%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L P +++ + + AN R P + L G V+++
Sbjct: 90 VSVTLLPDASVADKPAGVVNLSV----------ANLRTKPEHSAEMASQVL-LGAQVDIL 138
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSII 148
++ + ++R +G I W+ S + + ++ W + Y Y + Q
Sbjct: 139 QKIKGDYRVRTAEGYIAWVPTSSVVAVTNEELNDWKKAKKIIFTDEYGKSYATANTQGQQ 198
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQK 183
V+ + G +L + SG + D + +++K++
Sbjct: 199 VSDLVYGDMLILNGESGNFYAVTYPDKRKAYVRKEQ 234
>gi|254932143|ref|ZP_05265502.1| invasion associated protein p60 [Listeria monocytogenes HPB2262]
gi|293583699|gb|EFF95731.1| invasion associated protein p60 [Listeria monocytogenes HPB2262]
gi|328475869|gb|EGF46605.1| invasion associated secreted endopeptidase [Listeria monocytogenes
220]
Length = 475
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 139
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 140 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 171
>gi|254824145|ref|ZP_05229146.1| invasion associated protein p60 [Listeria monocytogenes FSL J1-194]
gi|254853219|ref|ZP_05242567.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-503]
gi|254991726|ref|ZP_05273916.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J2-064]
gi|255520992|ref|ZP_05388229.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J1-175]
gi|300765353|ref|ZP_07075336.1| hypothetical protein LMHG_10255 [Listeria monocytogenes FSL N1-017]
gi|258606573|gb|EEW19181.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-503]
gi|293593377|gb|EFG01138.1| invasion associated protein p60 [Listeria monocytogenes FSL J1-194]
gi|300513914|gb|EFK40978.1| hypothetical protein LMHG_10255 [Listeria monocytogenes FSL N1-017]
Length = 477
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 139
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 140 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 171
>gi|145627732|ref|ZP_01783533.1| hypothetical protein CGSHi22121_01805 [Haemophilus influenzae
22.1-21]
gi|144979507|gb|EDJ89166.1| hypothetical protein CGSHi22121_01805 [Haemophilus influenzae
22.1-21]
Length = 155
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|29378547|gb|AAO83975.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 63 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 121
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 122 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 153
>gi|29378519|gb|AAO83961.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|29378513|gb|AAO83958.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 61 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 119
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 120 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 151
>gi|29378515|gb|AAO83959.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 479
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|16077923|ref|NP_388737.1| hypothetical protein BSU08570 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308692|ref|ZP_03590539.1| hypothetical protein Bsubs1_04748 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313016|ref|ZP_03594821.1| hypothetical protein BsubsN3_04699 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317942|ref|ZP_03599236.1| hypothetical protein BsubsJ_04643 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322215|ref|ZP_03603509.1| hypothetical protein BsubsS_04739 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81637523|sp|O31579|YFHK_BACSU RecName: Full=Uncharacterized protein yfhK; Flags: Precursor
gi|2633180|emb|CAB12685.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|2804541|dbj|BAA24477.1| YfhK [Bacillus subtilis]
Length = 172
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 54/171 (31%), Gaps = 21/171 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRF-VT--------IKASRANSRIGPGIMYTVV 78
LA+ L H + PL V+ IKA + N R P ++
Sbjct: 6 VMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDIL 65
Query: 79 CTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T ++ V+V + +W QI F G +I+ L S + P N
Sbjct: 66 GT-VSSEQKVKVDRFVNADWAQIH-FKGKKAYISTHFLMKTASQAKTTKQTAFYTPTPEN 123
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQKI 184
K V + G +G W F +G+I + +
Sbjct: 124 GKAKQLSSGTEVTILGWG-----FSENGGFDFTWAFVDYGGVKGYIHTKDL 169
>gi|255596819|ref|XP_002536622.1| conserved hypothetical protein [Ricinus communis]
gi|223519057|gb|EEF25760.1| conserved hypothetical protein [Ricinus communis]
Length = 371
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 20/96 (20%)
Query: 109 WINKSLLSGKRSAIVSPWNR--------------KTNNPIYINLYKKPDIQSIIVAKVEP 154
+I +SL S KR A+ + + Y+++ P +S ++ +++
Sbjct: 272 YIKESLGSEKREAVKKIRKHVLASTNEISELDSYRLVSRKYLDMRSTPSAKSPLLGRLQV 331
Query: 155 GVLLTIRECSGEWCFGYNLD------TEGWIKKQKI 184
G ++ + E +W D +GW+ + +
Sbjct: 332 GQVVMLIEKRKDWSLVAWSDDENEVAIQGWVFSRYL 367
>gi|29378531|gb|AAO83967.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 458
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 62 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 120
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 121 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 152
>gi|29378517|gb|AAO83960.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 448
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 52 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 110
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 111 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 142
>gi|29378549|gb|AAO83976.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 62 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 120
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 121 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 152
>gi|29378543|gb|AAO83973.1| invasion associated protein p60 [Listeria monocytogenes ATCC 19117]
Length = 456
Score = 38.8 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 62 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 120
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 121 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 152
>gi|320119741|gb|ADW15969.1| invasion associated protein [Listeria monocytogenes]
Length = 217
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 67 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 125
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 126 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 157
>gi|296327569|ref|ZP_06870115.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155395|gb|EFG96166.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 163
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 56 RFVT-IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI------RDFDGTIG 108
R+V K AN R V+ L + E W + + D T G
Sbjct: 21 RYVVDTKDGYANLRERADSKSKVI-KKLKNNHEMVFWHEKGEWFCVGAEPDDKYSDMTDG 79
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW- 167
+I++S + + ++ Y N+ + S +A+++ G L+T E GEW
Sbjct: 80 YIHRSQIK-----LHPKTYTISSKDGYANVRNEAAANSHSIAELKNGTLVTKFEEKGEWW 134
Query: 168 -CFGYNLDTE----GWIKKQKI 184
+ D G++ K ++
Sbjct: 135 GIEFDSEDGTPFDYGYVHKSQL 156
>gi|325478274|gb|EGC81393.1| SH3 domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 147
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S IV + PG +L + E G W G+I+ +
Sbjct: 92 EDIVNIRLYPTEDSDIVGEAHPGDEILFLVESDG-WSRVTVNGVSGYIRNDLL 143
>gi|30314085|gb|AAO47068.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314089|gb|AAO47070.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 228
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 32 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 90
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 91 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 122
>gi|29378529|gb|AAO83966.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 458
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 62 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 120
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 121 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 152
>gi|317014641|gb|ADU82077.1| hypothetical protein HPGAM_06470 [Helicobacter pylori Gambia94/24]
Length = 192
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P ++ + + K V+V++ +W +I
Sbjct: 119 TPTTSTMGKKPLEYKVAV--SGVNVRAFPSTKGKIIGSLV-KNKSVKVLEIQNDWAEIEF 175
Query: 103 FDGTIGWINKSLLSG 117
T G++ LL
Sbjct: 176 SHETKGYVFLKLLKK 190
>gi|187778330|ref|ZP_02994803.1| hypothetical protein CLOSPO_01922 [Clostridium sporogenes ATCC
15579]
gi|187771955|gb|EDU35757.1| hypothetical protein CLOSPO_01922 [Clostridium sporogenes ATCC
15579]
Length = 256
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
GW+N L GK I +P +N+ +K S I+ G + +
Sbjct: 186 NNNGWVN---LDGKTGTICTPSG--------VNIREKKSTSSRILGASPNGAKVNLYRKE 234
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 235 GDWIHIYYPPHGGYVYGKYI 254
>gi|332298608|ref|YP_004440530.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181711|gb|AEE17399.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 427
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 12/80 (15%)
Query: 54 LPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----------WRQIRD 102
+P+ + + +R R P + +L G V + + + W ++
Sbjct: 139 IPQNYALLNDTRVRLRTKPNLQSDT-WGFLNTGDKVRIKDKTADKQKIANMNDYWYKVET 197
Query: 103 FDGTIGWINKSLLSGKRSAI 122
GWI + L K A+
Sbjct: 198 DGYPDGWIYGAFLDIKYDAV 217
>gi|190015106|ref|YP_001966638.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|190015372|ref|YP_001966963.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|218848264|ref|YP_002455003.1| S-layer domain-containing ribonuclease [Bacillus cereus AH820]
gi|116584782|gb|ABK00897.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|116585053|gb|ABK01162.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|218540315|gb|ACK92711.1| S-layer domain-containing ribonuclease [Bacillus cereus AH820]
Length = 1131
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW--INKSL 114
++T++++ P + + G +EV+ + W Q++ + G IG+ + +S+
Sbjct: 315 WITLRSAVKRIYPKPETKFLSKSKPVKDGDVLEVISKQGLWYQVK-YQGEIGYVRVLESV 373
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + L + +W
Sbjct: 374 VIGESPVRSWDVAKEATNLSHFMITEYHKDPEKYFPPNIQKKFDKQLDSDLNVLANGLQW 433
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 434 IDQLKEVLYLDNKQGWVQEEGKW 456
>gi|190015671|ref|YP_001967275.1| S-layer homology domain ribonuclease [Bacillus cereus]
gi|208702106|ref|YP_002267364.1| S-layer domain-containing ribonuclease [Bacillus cereus H3081.97]
gi|217956793|ref|YP_002335887.1| S-layer domain ribonuclease [Bacillus cereus AH187]
gi|229142596|ref|ZP_04271077.1| S-layer y domain ribonuclease [Bacillus cereus BDRD-ST26]
gi|116584578|gb|ABK00695.1| S-layer homology domain ribonuclease [Bacillus cereus]
gi|208657961|gb|ACI30331.1| S-layer domain-containing ribonuclease [Bacillus cereus H3081.97]
gi|217068558|gb|ACJ82806.1| S-layer domain ribonuclease [Bacillus cereus AH187]
gi|228640890|gb|EEK97240.1| S-layer y domain ribonuclease [Bacillus cereus BDRD-ST26]
Length = 1131
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW--INKSL 114
++T++++ P + + G +EV+ + W Q++ + G IG+ + +S+
Sbjct: 315 WITLRSAVKRIYPKPETKFLSKSKPVKDGDVLEVISKQGLWYQVK-YQGEIGYVRVLESV 373
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + L + +W
Sbjct: 374 VIGESPVRSWDVAKEATNLSHFMITEYHKDPEKYFPPNIQKKFDKQLDSDLNVLANGLQW 433
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 434 IDQLKEVLYLDNKQGWVQEEGKW 456
>gi|90185273|sp|Q4L6X7|LYTH_STAHJ RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
Length = 291
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLS 116
+ A R GP Y V+ + KG + + W ++ DG+ WI S
Sbjct: 49 SENAELRTGPNAAYPVIYQ-VEKGDTFTRLSKSGKWIEVESRDGSEKSWIAGWHTS 103
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GW 178
L P+ ++ +VE G T SG+W + D GW
Sbjct: 52 AELRTGPNAAYPVIYQVEKGDTFTRLSKSGKWIEVESRDGSEKSWIAGW 100
>gi|70726290|ref|YP_253204.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus haemolyticus
JCSC1435]
gi|68447014|dbj|BAE04598.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus haemolyticus
JCSC1435]
Length = 256
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-GWINKSLLS 116
+ A R GP Y V+ + KG + + W ++ DG+ WI S
Sbjct: 14 SENAELRTGPNAAYPVIYQ-VEKGDTFTRLSKSGKWIEVESRDGSEKSWIAGWHTS 68
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GW 178
L P+ ++ +VE G T SG+W + D GW
Sbjct: 17 AELRTGPNAAYPVIYQVEKGDTFTRLSKSGKWIEVESRDGSEKSWIAGW 65
>gi|281423272|ref|ZP_06254185.1| aerotolerance-related exported protein [Prevotella oris F0302]
gi|281402608|gb|EFB33439.1| aerotolerance-related exported protein [Prevotella oris F0302]
Length = 255
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+F L+I+F + +A + P V++K + +V + +G
Sbjct: 173 LLFVLSIFFAIQQKVAFENRNGAIIIVPT---VSLKKTPV--------KNSVDVVVVHEG 221
Query: 86 LPVEVVKE-YENWRQIRDFDGTIGWINKS 113
V ++ W +R DG GW++ S
Sbjct: 222 TKVNIIDRGIRGWYNVRLSDGHEGWLSVS 250
>gi|158334166|ref|YP_001515338.1| hypothetical protein AM1_0982 [Acaryochloris marina MBIC11017]
gi|158304407|gb|ABW26024.1| hypothetical protein AM1_0982 [Acaryochloris marina MBIC11017]
Length = 145
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIR-----DFDGTIGWINKSL 114
+ N R GPG Y V + GL V+V+ Y+ W +IR GW+ + L
Sbjct: 83 KINIRRGPGTGYKVGYS-SFSGLEVDVLSSYQTKGYKWYKIRYVNQILHQSESGWVREDL 141
Query: 115 L 115
+
Sbjct: 142 I 142
>gi|307571789|emb|CAR84968.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes L99]
Length = 375
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGWIN + + + K +Y P +
Sbjct: 257 KAVTEKGTWYQLQDQGKTIGWINSNAVEIFYTPQNETNVTLDKYITDSDQKVYAYPVEDN 316
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 317 SKVVANLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGW 357
>gi|228924260|ref|ZP_04087515.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835397|gb|EEM80783.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 337
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R GP +V+ L KG +V + NW + G WI
Sbjct: 209 VNLRSGPSTENSVI-RKLQKGETYKVWGKLGNWLHL----GDNQWIYY 251
>gi|290893150|ref|ZP_06556138.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
gi|290557312|gb|EFD90838.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
Length = 367
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGWIN + + + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKTIGWINSNAVEIFYTPQNETNVTLDKYITDSDQKVYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 309 SKVVANLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGW 349
>gi|217963635|ref|YP_002349313.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes HCC23]
gi|217332905|gb|ACK38699.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes HCC23]
Length = 367
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGWIN + + + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKTIGWINSNAVEIFYTPQNETNVTLDKYITDSDQKVYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 309 SKVVANLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGW 349
>gi|206889562|ref|YP_002248618.1| hypothetical protein THEYE_A0776 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741500|gb|ACI20557.1| hypothetical protein THEYE_A0776 [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 156
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P S + A V+ L + G+W + G+I + +
Sbjct: 34 IRESPRFFSPVKALVKYNDTLDVITKEGDWLKVKFKNKIGYIHRTAV 80
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ I I L ++ + + K+ R P V
Sbjct: 1 MKLRFIINFVILLSLIASISWAEIVTVITKENA------------IRESPRFFSPVK-AL 47
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ ++V+ + +W +++ F IG+I+++ + KR+A S + +
Sbjct: 48 VKYNDTLDVITKEGDWLKVK-FKNKIGYIHRTAV-EKRTASTSGISLQKKTGTT 99
>gi|154484009|ref|ZP_02026457.1| hypothetical protein EUBVEN_01717 [Eubacterium ventriosum ATCC
27560]
gi|149735051|gb|EDM50937.1| hypothetical protein EUBVEN_01717 [Eubacterium ventriosum ATCC
27560]
Length = 185
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
R + + ++ S ++ G + G+W +G+IK +
Sbjct: 123 GGRIKITADTLYVREEASADSSVLGMASTGDEFYVLGKEGDWVLVNYQGNDGYIKAE 179
>gi|118587555|ref|ZP_01544979.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
gi|118432006|gb|EAV38748.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
Length = 286
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
N INL P +S I+ +++ + + + + +W +GW+ I
Sbjct: 43 NAKSINLDASPSPKSKIIERLKKDQKIKVLKKNNNTDWWQVEIGSQKGWVASWLI 97
>gi|109946862|ref|YP_664090.1| hypothetical protein Hac_0243 [Helicobacter acinonychis str.
Sheeba]
gi|109714083|emb|CAJ99091.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 191
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP + + KKPL V + S N R P I ++ L K V+V++ ++
Sbjct: 112 APSIQSDQKTPAIGKKPLEYKVIV--SGVNVRSFPSIKGKIIGLLL-KNTSVKVLEIQKD 168
Query: 97 WRQIRDFDGTIGWINKSLLSG 117
W ++ T G++ L
Sbjct: 169 WAEVEFTKETKGYVFLKYLKK 189
>gi|29378485|gb|AAO83944.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|315186298|gb|EFU20059.1| SH3 type 3 domain protein [Spirochaeta thermophila DSM 6578]
Length = 117
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y L+ P + +V + G ++ I E G WC EGW+ + +
Sbjct: 46 DAYARLWDAPPPRGSVVGILRRGDMVEIVEEEGAWCRVVRGTEEGWVGEGHL 97
>gi|228911523|ref|ZP_04075314.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
gi|228848132|gb|EEM92995.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
Length = 340
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
N R GP + V+ L KG +V + +W + G WI
Sbjct: 209 VNLRSGPSTNHGVI-RQLNKGEAYQVWGKQGDWLNL----GGNQWIY 250
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+V +NL P ++ ++ G + G+W + WI
Sbjct: 195 VVGATGVAYIEGFNVNLRSGPSTNHGVIRQLNKGEAYQVWGKQGDW--LNLGGNQ-WIY 250
>gi|152996369|ref|YP_001341204.1| hypothetical protein Mmwyl1_2347 [Marinomonas sp. MWYL1]
gi|150837293|gb|ABR71269.1| hypothetical protein Mmwyl1_2347 [Marinomonas sp. MWYL1]
Length = 222
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
R G V L G P+ V+++ + + ++R G GW+ LS
Sbjct: 32 VAIREGLDNNTRAVERGLKSGTPLVVLEQNDGYTKVRTPSGNEGWVADYFLS 83
>gi|167766854|ref|ZP_02438907.1| hypothetical protein CLOSS21_01362 [Clostridium sp. SS2/1]
gi|167711608|gb|EDS22187.1| hypothetical protein CLOSS21_01362 [Clostridium sp. SS2/1]
gi|291558539|emb|CBL37339.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 223
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
L +S ++ ++E G +T+ SG+W G++ K+ ++
Sbjct: 46 CKLRASRSKRSKVLKRLEIGTPVTVYSTSGQWRKVSVNGKTGYVLKKYVY 95
>gi|153954464|ref|YP_001395229.1| hypothetical protein CKL_1839 [Clostridium kluyveri DSM 555]
gi|153954557|ref|YP_001395322.1| hypothetical protein CKL_1939 [Clostridium kluyveri DSM 555]
gi|219855052|ref|YP_002472174.1| hypothetical protein CKR_1709 [Clostridium kluyveri NBRC 12016]
gi|146347345|gb|EDK33881.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|146347415|gb|EDK33951.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219568776|dbj|BAH06760.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 252
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
++ + A N R GPG Y + T + K ++ NW I + GWI
Sbjct: 194 EWIIVTADVLNVRDGPGESYGIRGT-VKKDECYKIGSIQGNWADIY-WSNHGGWI 246
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 15/48 (31%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ P I V+ I G W Y + GWI
Sbjct: 199 TADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWI 246
>gi|15645864|ref|NP_208042.1| hypothetical protein HP1250 [Helicobacter pylori 26695]
gi|2314420|gb|AAD08300.1| predicted coding region HP1250 [Helicobacter pylori 26695]
Length = 192
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P ++ L K V+V++ +W +I T G++
Sbjct: 127 KKPLEYKVAV--SGVNVRAFPSTKGKILGLLL-KNKSVKVLEIQNDWAEIEFSHETKGYV 183
Query: 111 NKSLLSG 117
LL
Sbjct: 184 FLKLLKK 190
>gi|149657|gb|AAA25280.1| p60-related protein [Listeria monocytogenes]
Length = 478
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 K 118
K
Sbjct: 143 K 143
>gi|29378437|gb|AAO83920.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 142
Query: 118 K 118
K
Sbjct: 143 K 143
>gi|325286055|ref|YP_004261845.1| hypothetical protein Celly_1146 [Cellulophaga lytica DSM 7489]
gi|324321509|gb|ADY28974.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 250
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+ + + F +I F L I A++ + R + + P
Sbjct: 148 KFFNYSTKKRISFVASITFLLLSITAITAAYLNYSDFKKNRPAIVFNEESLVLEEPNTRS 207
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V L +G V V+ E + + +I+ DG GWI+
Sbjct: 208 KEVFR-LHEGTKVFVLDELKQYYKIKLADGKTGWISS 243
>gi|323491180|ref|ZP_08096366.1| SH3 domain-containing protein [Vibrio brasiliensis LMG 20546]
gi|323314548|gb|EGA67626.1| SH3 domain-containing protein [Vibrio brasiliensis LMG 20546]
Length = 203
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 24/134 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K++ L LA+ A + + R+++ K GP + +
Sbjct: 1 MKKLVCFVLASMLAVPA------AFAQD----------RYISDKL-FTYMHSGPSNQFRI 43
Query: 78 VCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTN 131
+ + + G V+++ + + Q++D G GW+ ++ + S + K
Sbjct: 44 IGS-VDAGDKVKLLSTNKDSGYTQVQDSKGRKGWVESRFVTNQESMALRLPKLENELKDV 102
Query: 132 NPIYINLYKKPDIQ 145
N D +
Sbjct: 103 KEKLANARSNADQE 116
>gi|83591045|ref|YP_431054.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
gi|83573959|gb|ABC20511.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
Length = 309
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 14/170 (8%)
Query: 26 LIFTLAIYFYLAPILALSHEK-EIFEKKP----LPRFVT--IKASRANSRIGPGIMYTVV 78
I LA+ +L+ ++ + P PR + + + A+ R P V
Sbjct: 13 FIIALAMVIAGGFLLSRQAKRLPPPVQLPPGATTPRAESWYVGVAVADVRANPDQGAERV 72
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G V+++++ W Q + DG IGW+ K L R+ + L
Sbjct: 73 TQAL-LGDEVKLLRDEGEWLQGQVPDGYIGWLQKGNL--VRATPPLARDLVAVRVPRAIL 129
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQK--IW 185
YK+P + + G L + +W + W+ +Q+ +W
Sbjct: 130 YKEPGSDAQ-AGEALLGTDLPLLAQKEDWLEVWLPGRPPAWLSRQEVDLW 178
>gi|229020994|ref|ZP_04177680.1| S-layer y domain protein [Bacillus cereus AH1273]
gi|228740307|gb|EEL90619.1| S-layer y domain protein [Bacillus cereus AH1273]
Length = 734
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + T+ + PV VV+E +W +I+ + G W++K P N+
Sbjct: 436 PSRSASALGTWGPQ--PVTVVEERGSWIRIKTYLGLQ-WVDKK-----------PENQYI 481
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + Y +P+ S + K P ++ +E W + W+ I
Sbjct: 482 SKVFFA--YDEPNYSSRVSFKYAPQNVVVEQEMHNGWSRVQTGNGLKWVNINNI 533
>gi|229024525|ref|ZP_04180971.1| S-layer y domain protein [Bacillus cereus AH1272]
gi|228736749|gb|EEL87298.1| S-layer y domain protein [Bacillus cereus AH1272]
Length = 721
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + T+ + PV VV+E +W +I+ + G W++K P N+
Sbjct: 423 PSRSASALGTWGPQ--PVTVVEERGSWIRIKTYLGLQ-WVDKK-----------PENQYI 468
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + Y +P+ S + K P ++ +E W + W+ I
Sbjct: 469 SKVFFA--YDEPNYSSRVSFKYAPQNVVVEQEMHNGWSRVQTGNGLKWVNINNI 520
>gi|239831556|ref|ZP_04679885.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239823823|gb|EEQ95391.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 197
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P + + + G +T+R C+ WC T GW + +
Sbjct: 59 TNLNIRTGPGTRYATLGSIPSGAPVTVRGCTAGYGWCQVSYGPTFGWASSRYL 111
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLS 116
I + N R GPG Y + + + G PV V W Q+ + T GW + L+
Sbjct: 56 ISTTNLNIRTGPGTRYATLGS-IPSGAPVTVRGCTAGYGWCQVS-YGPTFGWASSRYLA 112
>gi|229829550|ref|ZP_04455619.1| hypothetical protein GCWU000342_01646 [Shuttleworthia satelles DSM
14600]
gi|229791539|gb|EEP27653.1| hypothetical protein GCWU000342_01646 [Shuttleworthia satelles DSM
14600]
Length = 408
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S ++ + V + IN+ + D + +V + +T+ W
Sbjct: 80 VASSAVNKTLYSKV----GIAHTDSVINVRESADDNARLVGYLYNNNAMTVDAEENGWLH 135
Query: 170 GYNLDTEGWIKKQKI 184
+ D G++K I
Sbjct: 136 ISSGDVNGYVKADGI 150
>gi|212640423|ref|YP_002316943.1| N-acetylmuramoyl-L-alanine amidase containing SLH domains
[Anoxybacillus flavithermus WK1]
gi|212561903|gb|ACJ34958.1| N-acetylmuramoyl-L-alanine amidase containing SLH domains
[Anoxybacillus flavithermus WK1]
Length = 480
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 24/57 (42%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ + P ++V ++ G ++ + + +G W ++ K +
Sbjct: 231 QGTVTTATLNVRQTPSATGVLVGTLQKGQVVDVYDLNGYWAKIAYNGQFAYVHKTYL 287
>gi|153939498|ref|YP_001391632.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|152935394|gb|ABS40892.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|295319665|gb|ADG00043.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
230613]
Length = 255
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
GW+N +G N P +N+ + + S I+ + G + + G
Sbjct: 186 DNGWVNLDCKTGT-----------INTPSGVNIREAKNTSSKILGALPNGAKVQLYRKEG 234
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W Y G++ + I
Sbjct: 235 DWIHIYYPPHGGYVYGKYI 253
>gi|145350098|ref|XP_001419460.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579691|gb|ABO97753.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 104
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 21/51 (41%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + ++ + ++S I+ ++ L+ R G+W GW+
Sbjct: 27 RVAHGPFVPVRASASVKSEIIGRMHEDRLVRARARRGDWIELREDGVAGWM 77
>gi|313607421|gb|EFR83787.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
F2-208]
Length = 367
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 11/99 (11%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQSI 147
V E W Q++D TIGWIN + + + K +Y P + S
Sbjct: 251 VTEKGTWYQLQDQGKTIGWINSNAVEIFYTPQNETNVTLDKYITDSDQKVYAYPVEDNSK 310
Query: 148 IVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
+VA + G L I + W + D + GW
Sbjct: 311 VVANLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGW 349
>gi|119943966|ref|YP_941646.1| SH3 type 3 domain-containing protein [Psychromonas ingrahamii 37]
gi|119862570|gb|ABM02047.1| SH3, type 3 domain protein [Psychromonas ingrahamii 37]
Length = 189
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV--KEYENWRQIRDFDGTIGWINKS 113
R+V+ GP Y ++ T L G PV + + + Q++ +G W+
Sbjct: 11 RYVS-DDIFIYMHSGPSREYRIIGT-LDVGSPVTTLTYNKKTGFYQVKTANGKTAWVKGD 68
Query: 114 LLSGKRSAI-VSPWNRKTNNPIYINLYKKPDIQSIIV 149
L A + P +K I L S I+
Sbjct: 69 QLQTTLPAKNLLPAIQKELQEAQIKLQNIDQKNSEIL 105
>gi|313206300|ref|YP_004045477.1| sh3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|312445616|gb|ADQ81971.1| SH3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|315023017|gb|EFT36030.1| hypothetical protein RAYM_01862 [Riemerella anatipestifer RA-YM]
gi|325336257|gb|ADZ12531.1| SH3 type 3 domain protein [Riemerella anatipestifer RA-GD]
Length = 138
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIK 180
V +NL K+P ++ +V K G +T+ E + W EG+
Sbjct: 73 VGASLTVITESSNLNLRKEPSTEAEVVGKAAKGEAVTLVEMTSNDWWKVKTKDGEEGYAY 132
Query: 181 KQKI 184
+ +
Sbjct: 133 TRYL 136
>gi|262404756|ref|ZP_06081311.1| arylsulfatase [Vibrio sp. RC586]
gi|262349788|gb|EEY98926.1| arylsulfatase [Vibrio sp. RC586]
Length = 202
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 18/130 (13%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ F + + ++ I +K GP Y ++ + + G
Sbjct: 4 LICMVLFSMLAAPTFAQDRYIADKLFT-----------YMHSGPSNQYRILGS-IDAGEK 51
Query: 88 VEV--VKEYENWRQIRDFDGTIGWINKSL----LSGKRSAIVSPWNRKTNNPIYINLYKK 141
V++ V + + QI D G GW+ +S + N +
Sbjct: 52 VKLLEVNKESGYSQITDERGRTGWVESRFITREVSNTLRLPALEKELAEVKKLLANARQN 111
Query: 142 PDIQSIIVAK 151
D + +A+
Sbjct: 112 ADSEQAGLAE 121
>gi|157164435|ref|YP_001466740.1| putative periplasmic protein [Campylobacter concisus 13826]
gi|112800161|gb|EAT97505.1| putative periplasmic protein [Campylobacter concisus 13826]
Length = 435
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 25 SLIFTLAIY---FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ LAI+ + A+ I+ P + V +K + I P TV T
Sbjct: 342 AIFILLAIWRRKLSYFFVAAIFIALGIYTYNPFGKAV-LKPD-VSVTILPTKNSTVFYT- 398
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K VE++ +++ +I DG IGW+
Sbjct: 399 SRKNENVEILDTKDDYSKILFADGKIGWV 427
>gi|254481832|ref|ZP_05095075.1| Bacterial SH3 domain family protein [marine gamma proteobacterium
HTCC2148]
gi|214037961|gb|EEB78625.1| Bacterial SH3 domain family protein [marine gamma proteobacterium
HTCC2148]
Length = 222
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNL-DTEGWIK 180
+ + ++ +++ L+K P + VAK+ PG L + GEW T GW+
Sbjct: 19 AQAVKYVSDEVFVVLHKGPGAEYRWVAKLTPGTRLRMAGTAEDGEWAEVTTDRGTTGWVS 78
Query: 181 KQKI 184
+ +
Sbjct: 79 TEFL 82
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 21/102 (20%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS--RIGPGIMYTVVCT-YLT 83
+ +A F P A + ++V+ GPG Y LT
Sbjct: 5 LSVIAFVFAALPAQAQAV-----------KYVS---DEVFVVLHKGPGAEYR--WVAKLT 48
Query: 84 KGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
G + + E W ++ GT GW++ LS A V
Sbjct: 49 PGTRLRMAGTAEDGEWAEVTTDRGTTGWVSTEFLSSDTPAQV 90
>gi|27379334|ref|NP_770863.1| hypothetical protein blr4223 [Bradyrhizobium japonicum USDA 110]
gi|27352485|dbj|BAC49488.1| blr4223 [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L P +V ++ G + I C WC D GW+ Q +
Sbjct: 31 LRAGPGSGFPVVDRIPEGARVNIHGCLRGNAWCDVSFSDDRGWVSSQYL 79
>gi|326923917|ref|XP_003208179.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Meleagris
gallopavo]
Length = 942
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 53 LQAGEVVDVIEKNESGWWFVSTAE-EQGWVPATYLESQNGTRDDSDINTSKTGEEEKYVT 111
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + + W + L EGW +
Sbjct: 112 IQPYASQGKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 158
>gi|298715048|emb|CBJ27755.1| hypothetical protein Esi_0084_0050 [Ectocarpus siliculosus]
Length = 2594
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
SGK +A + P + + ++ D S+ VA +E G ++ + E S W
Sbjct: 652 SGKGNAASVGQFLTSAGP--LKVREEADPFSLDVATMEKGHIVKVLETSDMWVRVSYRGR 709
Query: 176 -EGWI 179
+GW+
Sbjct: 710 DDGWV 714
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWI 179
+ L ++ D S+ + V G L+ + + SG W Y D+ GW+
Sbjct: 507 RAAGQLKLREEADSLSLELGTVSRGELVRVEQTSGLWVRVLYRGDSSGWV 556
>gi|29378487|gb|AAO83945.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|29378523|gb|AAO83963.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|315179132|gb|ADT86046.1| hypothetical protein vfu_A00850 [Vibrio furnissii NCTC 11218]
Length = 236
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 19/133 (14%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ F + + ++ I +K GP Y ++ + + G
Sbjct: 38 LICMVLFSMLAAPTFAQDRYIADKLFT-----------YMHSGPSNQYRIIGS-IDAGEK 85
Query: 88 VEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYKK 141
V+++ + ++ QI D G GW+ ++ S V N +
Sbjct: 86 VKLINTNKETDYTQIVDERGRTGWVESRFVTRDVSMAVRLPQLEKELTDVKSKLANARQN 145
Query: 142 PD-IQSIIVAKVE 153
D ++ +V +E
Sbjct: 146 ADSEKAGLVDSLE 158
>gi|260771261|ref|ZP_05880188.1| arylsulfatase [Vibrio furnissii CIP 102972]
gi|260613858|gb|EEX39050.1| arylsulfatase [Vibrio furnissii CIP 102972]
Length = 221
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 19/133 (14%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ F + + ++ I +K GP Y ++ + + G
Sbjct: 23 LICMVLFSMLAAPTFAQDRYIADKLFT-----------YMHSGPSNQYRIIGS-IDAGEK 70
Query: 88 VEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYKK 141
V+++ + ++ QI D G GW+ ++ S V N +
Sbjct: 71 VKLINTNKETDYTQIVDERGRTGWVESRFVTRDVSMAVRLPQLEKELTDVKSKLANARQN 130
Query: 142 PD-IQSIIVAKVE 153
D ++ +V +E
Sbjct: 131 ADSEKAGLVDSLE 143
>gi|254830433|ref|ZP_05235088.1| invasion associated secreted endopeptidase [Listeria monocytogenes
10403S]
gi|66737334|gb|AAY54613.1| Iap [Listeria monocytogenes]
Length = 476
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 82 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 140
Query: 118 K 118
K
Sbjct: 141 K 141
>gi|30314079|gb|AAO47065.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 192
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 32 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 90
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 91 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 122
>gi|29378525|gb|AAO83964.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|296504194|ref|YP_003665894.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|296325246|gb|ADH08174.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 351
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V I+ N R GP V+ L KG +V K+ +W I G+ WI
Sbjct: 216 VNIEGYNVNLRSGPSTKNKVI-RKLQKGETYKVGKKVGDWLDI----GSNQWIYY 265
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+IV +NL P ++ ++ K++ G + + G+W
Sbjct: 208 SIVEANGVVNIEGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDW 254
>gi|47093323|ref|ZP_00231092.1| protein P60 [Listeria monocytogenes str. 4b H7858]
gi|47018292|gb|EAL09056.1| protein P60 [Listeria monocytogenes str. 4b H7858]
Length = 469
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 139
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 140 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 171
>gi|322807340|emb|CBZ04914.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 259
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
WIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 DTVWIN---LDGKTGTICTPSG--------VNVRENKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSRYI 254
>gi|226950439|ref|YP_002805530.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842271|gb|ACO84937.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 259
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
WIN L GK I +P +N+ + S I+ + G + + G
Sbjct: 187 DTVWIN---LDGKTGTICTPSG--------VNVRENKSTSSRILGTLPNGAKVQLYRKEG 235
Query: 166 EWCFGYNLDTEGWIKKQKI 184
EW Y G+I + I
Sbjct: 236 EWMHVYYPPHGGYIYSRYI 254
>gi|149052238|gb|EDM04055.1| rCG32613 [Rattus norvegicus]
Length = 819
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 124 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 181
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E GV++ + + + W EGW +
Sbjct: 182 ARDQDEMNLERGVVVEVIQKNLEGWWKIRFQGKEGWAPASYL 223
>gi|118092997|ref|XP_421741.2| PREDICTED: similar to SH3 multiple domains 1 [Gallus gallus]
Length = 1108
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 219 LQAGEVVDVIEKNESGWWFVSTAE-EQGWVPATYLESQNGTRDDSDINTSKTGEEEKYVT 277
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + + W + L EGW +
Sbjct: 278 IQPYASQGKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 324
>gi|29378469|gb|AAO83936.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 486
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 84 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKPGFVNGKYLTD 142
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 143 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 174
>gi|15964759|ref|NP_385112.1| hypothetical protein SMc00062 [Sinorhizobium meliloti 1021]
gi|15073937|emb|CAC45578.1| Hypothetical protein SMc00062 [Sinorhizobium meliloti 1021]
Length = 211
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
V+ + +N+ P V + G + I C WC GW+
Sbjct: 15 VAASAAEGFATANVNMRSGPSTYYPAVTVIPVGESVEIHGCLSESPWCDVSFYGGRGWVA 74
Query: 181 KQKI 184
+ +
Sbjct: 75 GRYV 78
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 17/81 (20%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ A + E N R GP Y V + G VE+
Sbjct: 13 MPVAASAAEGFATAN-------------VNMRSGPSTYYPAVTV-IPVGESVEIHGCLSE 58
Query: 97 --WRQIRDFDGTIGWINKSLL 115
W + + G GW+ +
Sbjct: 59 SPWCDVSFYGG-RGWVAGRYV 78
>gi|307304335|ref|ZP_07584087.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
gi|307319440|ref|ZP_07598867.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306894812|gb|EFN25571.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306902803|gb|EFN33396.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
Length = 214
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
V+ + +N+ P V + G + I C WC GW+
Sbjct: 18 VAASAAEGFATANVNMRSGPSTYYPAVTVIPVGESVEIHGCLSESPWCDVSFYGGRGWVA 77
Query: 181 KQKI 184
+ +
Sbjct: 78 GRYV 81
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 17/81 (20%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ A + E N R GP Y V + G VE+
Sbjct: 16 MPVAASAAEGFATAN-------------VNMRSGPSTYYPAVTV-IPVGESVEIHGCLSE 61
Query: 97 --WRQIRDFDGTIGWINKSLL 115
W + + G GW+ +
Sbjct: 62 SPWCDVSFYGG-RGWVAGRYV 81
>gi|251792113|ref|YP_003006833.1| SH3 domain-containing protein [Aggregatibacter aphrophilus NJ8700]
gi|247533500|gb|ACS96746.1| SH3 domain protein [Aggregatibacter aphrophilus NJ8700]
Length = 203
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G Y + + G V V+ + + + IRD WI + LS + S+
Sbjct: 36 LRKGAGDQYKIAGA-IKSGEAVTVLDQKDRYTLIRDAKNREAWILTNELSNEASS 89
>gi|290889857|ref|ZP_06552944.1| hypothetical protein AWRIB429_0334 [Oenococcus oeni AWRIB429]
gi|290480467|gb|EFD89104.1| hypothetical protein AWRIB429_0334 [Oenococcus oeni AWRIB429]
Length = 286
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
INL P +S I+ +++ + + + + +W +GW+ I
Sbjct: 43 KAKSINLDASPSPKSKIIERLKKDQKIKVLKKNNNTDWWQVEIGSQKGWVASWLI 97
>gi|218129495|ref|ZP_03458299.1| hypothetical protein BACEGG_01072 [Bacteroides eggerthii DSM 20697]
gi|313145912|ref|ZP_07808105.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|217988225|gb|EEC54548.1| hypothetical protein BACEGG_01072 [Bacteroides eggerthii DSM 20697]
gi|313134679|gb|EFR52039.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 277
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 6/76 (7%), Positives = 25/76 (32%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ +L+ + + P +N+ + ++ ++ ++ + W
Sbjct: 25 WVLFLILNFSLCTQSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWA 84
Query: 169 FGYNLDTEGWIKKQKI 184
+G++ +
Sbjct: 85 NINYNGWQGYVSASYL 100
>gi|116490465|ref|YP_810009.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
gi|116091190|gb|ABJ56344.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
Length = 286
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
INL P +S I+ +++ + + + + +W +GW+ I
Sbjct: 43 KAKSINLDASPSPKSKIIERLKKDQKIKVLKKNNNTDWWQVEIGSQKGWVASWLI 97
>gi|317049595|ref|YP_004117243.1| SH3 domain-containing protein [Pantoea sp. At-9b]
gi|316951212|gb|ADU70687.1| SH3 domain protein [Pantoea sp. At-9b]
Length = 206
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVE 89
I F +LA S + R+++ + R GPG Y +V L G V+
Sbjct: 4 ITFAALSLLAFSAITPAHAAEK--RYIS---DELSTWVRSGPGDQYRLVGK-LNAGEEVQ 57
Query: 90 VVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+++ + + QI+D G WI S LS S + +
Sbjct: 58 LLQTNNDSQYGQIQDSQGRTTWIPLSQLSTDPSLRTRVPQLEQQVKDLTD 107
>gi|229021056|ref|ZP_04177716.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
gi|229027794|ref|ZP_04183969.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228733515|gb|EEL84324.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228740239|gb|EEL90577.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
Length = 337
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRS-A 121
N R GP +V+ L KG +V + NW + G WI S + + A
Sbjct: 209 VNLRSGPSTDNSVI-RKLQKGEAYKVWGKLGNWLNL----GGNQWIYYDSSYIRYNGTDA 263
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
R + + Y+ P Q VA+V
Sbjct: 264 STITGKRVISKVDNLRFYESPSWQDKDVAEV 294
>gi|212695835|ref|ZP_03303963.1| hypothetical protein ANHYDRO_00368 [Anaerococcus hydrogenalis DSM
7454]
gi|212677160|gb|EEB36767.1| hypothetical protein ANHYDRO_00368 [Anaerococcus hydrogenalis DSM
7454]
Length = 354
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 23/167 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR-IGPGIMYT 76
M K + ++ + + F +H K + + N R G +
Sbjct: 1 MRKNKKIIILLSGILAFQFFAPKTRAHAKGLIINYDI-------TEGVNIRESGSSSNNS 53
Query: 77 VVCTYLTKGLP--VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
P E+ +E +W +I DF G++ GK V + +
Sbjct: 54 K--ILGGIDYPDVYEIKEEDNDWYKI-DFKDKKGYV------GKSWFYVLDDVKTLDKG- 103
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIK 180
+Y+K D +S V+ + L + ++ D G+IK
Sbjct: 104 --KIYEKADEKSKEVSDFKKDEKLILVNFSDKDFIKVKKGDKTGFIK 148
>gi|332663484|ref|YP_004446272.1| hypothetical protein Halhy_1507 [Haliscomenobacter hydrossis DSM
1100]
gi|332332298|gb|AEE49399.1| Tetratricopeptide TPR_1 repeat-containing protein
[Haliscomenobacter hydrossis DSM 1100]
Length = 259
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L + ++ + I L+I A + + L +
Sbjct: 158 LLRRQTAKPWLRWAARG--ILGLSILVLAAAAFSYWNSYHNPTGVIL-------SKETTL 208
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
RIGP + L +G V + + W ++R +G GW+ R
Sbjct: 209 RIGPEKASPAI-RKLHEGTKVAYLDKIGTWDKVRLSNGQEGWLEGKSTGRIR 259
>gi|323702830|ref|ZP_08114489.1| NLP/P60 protein [Desulfotomaculum nigrificans DSM 574]
gi|323532218|gb|EGB22098.1| NLP/P60 protein [Desulfotomaculum nigrificans DSM 574]
Length = 269
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN----PIYINLYK 140
G P +V+ +W I+ DG+ GW + + PW + + +LY
Sbjct: 39 GWPAQVLGMEADWLHIQAADGSPGW------AKMDHFSLPPWPEQVSQIKIRRATADLYL 92
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
P + + + + G L + E E+ ++ K+ +
Sbjct: 93 IPGVTAKKLCTLFLGSQLYLLEQREEYLKVVVPRGGTAFVHKEDV 137
>gi|299534814|ref|ZP_07048143.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
fusiformis ZC1]
gi|298729659|gb|EFI70205.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
fusiformis ZC1]
Length = 420
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
W ++ + IG++ + L +P +K N L ++ +
Sbjct: 133 GGWSFVQ-YGEEIGYVATNALKK-----PAPTKKKINAVAGAELRLTASPNGEVLGTLPN 186
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W + D +G++K ++
Sbjct: 187 KTTVQYYITLAGWAYVEAGDQKGYVKASEL 216
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 26/70 (37%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
L+G+ S ++++ S + ++ G +++ + S W +
Sbjct: 18 LAGQLSVNAEGSVVIHKVVKDTVIFEEASTNSAEIGELAKGSFVSVTKVSKGWTHIQTPE 77
Query: 175 TEGWIKKQKI 184
EG++ +
Sbjct: 78 QEGYVTSDAL 87
>gi|265983842|ref|ZP_06096577.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|264662434|gb|EEZ32695.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
Length = 166
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 25 TNLNVRTGPGTGYAAVGAIPGGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 77
>gi|261221933|ref|ZP_05936214.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|265997896|ref|ZP_06110453.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|260920517|gb|EEX87170.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|262552364|gb|EEZ08354.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
Length = 166
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 25 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|29378527|gb|AAO83965.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 61 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 119
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 120 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 151
>gi|17987498|ref|NP_540132.1| hypothetical protein BMEI1215 [Brucella melitensis bv. 1 str. 16M]
gi|261218897|ref|ZP_05933178.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261317395|ref|ZP_05956592.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|265988432|ref|ZP_06100989.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|17983196|gb|AAL52396.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
str. 16M]
gi|260923986|gb|EEX90554.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261296618|gb|EEY00115.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|264660629|gb|EEZ30890.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 166
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 25 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|317476138|ref|ZP_07935390.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316907776|gb|EFV29478.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 277
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 6/76 (7%), Positives = 25/76 (32%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ +L+ + + P +N+ + ++ ++ ++ + W
Sbjct: 25 WVLFLILNFSLCTQSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWA 84
Query: 169 FGYNLDTEGWIKKQKI 184
+G++ +
Sbjct: 85 NINYNGWQGYVSASYL 100
>gi|172035416|ref|YP_001801917.1| hypothetical protein cce_0500 [Cyanothece sp. ATCC 51142]
gi|171696870|gb|ACB49851.1| hypothetical protein cce_0500 [Cyanothece sp. ATCC 51142]
Length = 190
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 30/146 (20%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYEN-------WRQIRDFD-GTIGWINKS 113
SR N R P + + Y G V ++ + W +++ G IGWI
Sbjct: 31 SRINLRSQPSVNSASLG-YSLPGDQVSLLDFNKGSGGQPRVPWIKVKFAKSGAIGWIRGD 89
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE----------C 163
+ + + + + INL K P I S + G + + C
Sbjct: 90 FVKTDITILTA-----NDPNSRINLRKGPSIASDSLGYGLVGDRIKVLAFPARSPSCTVC 144
Query: 164 SGEWCFGYNLDTEG-----WIKKQKI 184
W + + G WIK Q +
Sbjct: 145 GQGWEYVTMSNRTGSSRTPWIKVQFL 170
>gi|206973290|ref|ZP_03234212.1| S-layer domain protein [Bacillus cereus AH1134]
gi|206732174|gb|EDZ49374.1| S-layer domain protein [Bacillus cereus AH1134]
Length = 1143
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
++T++++ P + + + G +EV+ + W Q++ + G IG++ +S+
Sbjct: 315 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVK-YQGEIGYVRILESV 373
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + LT+ +W
Sbjct: 374 IIGESPVRSWDVTKEATNLSHFMITEYHKDPEKYFPPNIHKKFDKQLDSDLTLLANGLQW 433
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 434 IDQLKEALYLDNKQGWVQEEGKW 456
>gi|229051308|ref|ZP_04194825.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
gi|228722041|gb|EEL73469.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
Length = 337
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V I+ N R GP V+ L KG +V K+ +W I G+ WI
Sbjct: 202 VNIEGYNVNLRSGPSTKNKVI-RKLQKGETYKVGKKVGDWLDI----GSNQWIYY 251
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+IV +NL P ++ ++ K++ G + + G+W
Sbjct: 194 SIVEANGVVNIEGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDW 240
>gi|229128968|ref|ZP_04257943.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
gi|229146261|ref|ZP_04274636.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
gi|228637320|gb|EEK93775.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
gi|228654513|gb|EEL10376.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
Length = 337
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V I+ N R GP V+ L KG +V K+ +W I G+ WI
Sbjct: 202 VNIEGYNVNLRSGPSTKNKVI-RKLQKGETYKVGKKVGDWLDI----GSNQWIYY 251
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+IV +NL P ++ ++ K++ G + + G+W
Sbjct: 194 SIVEANGVVNIEGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDW 240
>gi|303243035|ref|ZP_07329487.1| SH3 type 3 domain protein [Acetivibrio cellulolyticus CD2]
gi|302589428|gb|EFL59224.1| SH3 type 3 domain protein [Acetivibrio cellulolyticus CD2]
Length = 451
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKP---LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L I P+ A + K E +++ + N R P + L
Sbjct: 358 LDISGTPQPVAAQTDYKPTTESNDSIVQSKYIITAETGLNLREKPNASSKKLLQ-----L 412
Query: 87 PVE--VVKEYEN--WRQIRDFDGTIGWINKSLLSGKR 119
P E V+KE E+ W +I DG GW++ L R
Sbjct: 413 PFESIVIKEAEDGAWYKITTKDGISGWVSSKYLKEFR 449
>gi|291537178|emb|CBL10290.1| Predicted glycosyl hydrolase [Roseburia intestinalis M50/1]
gi|291540410|emb|CBL13521.1| Predicted glycosyl hydrolase [Roseburia intestinalis XB6B4]
Length = 610
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ L S R + + W T P L +K I+S I+A + +T+ E W
Sbjct: 150 YEVLDSPNRVILTTAWGDYTTAPAKQKTQLRQKGGIKSPILADIGKNTEVTVLETGDTWT 209
Query: 169 FGY-NLDTEGWIKKQKI 184
G+IK + +
Sbjct: 210 KVSTAEGIIGYIKSKAL 226
>gi|300779011|ref|ZP_07088869.1| bacterial SH3 domain protein [Chryseobacterium gleum ATCC 35910]
gi|300504521|gb|EFK35661.1| bacterial SH3 domain protein [Chryseobacterium gleum ATCC 35910]
Length = 378
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIKKQKI 184
++ + NL K+ + S I+ K+ G + + +G+ W +G++ K +I
Sbjct: 321 DSDGFTNLRKEKNSSSQILQKINTGEQIEVLNQNGDWWLVVSKEGKKGYVHKSRI 375
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
N R ++ + G +EV+ + +W + +G G+++KS
Sbjct: 327 NLRKEKNSSSQIL-QKINTGEQIEVLNQNGDWWLVVSKEGKKGYVHKS 373
>gi|240143507|ref|ZP_04742108.1| glycosyl hydrolase [Roseburia intestinalis L1-82]
gi|257204542|gb|EEV02827.1| glycosyl hydrolase [Roseburia intestinalis L1-82]
Length = 610
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ L S R + + W T P L +K I+S I+A + +T+ E W
Sbjct: 150 YEVLDSPNRVILTTAWGDYTTAPAKQKTQLRQKGGIKSPILADIGKNTEVTVLETGDTWT 209
Query: 169 FGY-NLDTEGWIKKQKI 184
G+IK + +
Sbjct: 210 KVSTAEGIIGYIKSKAL 226
>gi|20386518|gb|AAM21693.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386520|gb|AAM21694.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 76 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 134
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 135 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 166
>gi|146278586|ref|YP_001168745.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556827|gb|ABP71440.1| SH3, type 3 domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 178
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLLSGK 118
+ A N R GP + VV + V + + W IR + DG G++ L
Sbjct: 117 VTADAVNVRSGPSTAFPVVGRLTRGEAVLVVASDAKGWAPIRIEGDGLEGYMATRFLRPA 176
Query: 119 R 119
Sbjct: 177 P 177
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEW--C 168
+ + + + + + +N+ P +V ++ G +L + + W
Sbjct: 98 QPMPAAPPEILEVRGDVRLVTADAVNVRSGPSTAFPVVGRLTRGEAVLVVASDAKGWAPI 157
Query: 169 FGYNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 158 RIEGDGLEGYMATRFL 173
>gi|326929084|ref|XP_003210701.1| PREDICTED: NADPH oxidase organizer 1-like [Meleagris gallopavo]
Length = 473
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 88 VEVV-KEYENWRQIRDFDGTIGWINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDI 144
VEV+ K+ W + + D I W S L I + + +Y +
Sbjct: 177 VEVLLKDMTGWWLVENADKQIAWFPASYLEQISVHKDIQNVRSSDEEGSLYFVMRAYESQ 236
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIK 180
++ ++ + GV++ + R W G++
Sbjct: 237 KADELS-LNKGVVVEVVRRSDNGWWLIRYNGRTGYMP 272
>gi|254718857|ref|ZP_05180668.1| SH3 type 3 domain protein [Brucella sp. 83/13]
gi|306837641|ref|ZP_07470511.1| SH3 type 3 domain protein [Brucella sp. NF 2653]
gi|306407290|gb|EFM63499.1| SH3 type 3 domain protein [Brucella sp. NF 2653]
Length = 170
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 29 TNLNVRTGPGTGYAAVGAIPGGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 81
>gi|170759058|ref|YP_001788327.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A3 str. Loch Maree]
gi|169406047|gb|ACA54458.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A3 str. Loch Maree]
Length = 256
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +N+ + S I+ + G + + GEW Y G+I + I
Sbjct: 202 TPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHVYYPPHGGYIYSRYI 254
>gi|29378503|gb|AAO83953.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|29378493|gb|AAO83948.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|146343399|ref|YP_001208447.1| hypothetical protein BRADO6628 [Bradyrhizobium sp. ORS278]
gi|146196205|emb|CAL80232.1| hypothetical protein BRADO6628 [Bradyrhizobium sp. ORS278]
Length = 315
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--- 96
+ LS E R+V I R GPG + L G + VV+ +
Sbjct: 219 VTLSRSVEPSHGLATGRYVVIARGGLKLRGGPGTSFESE-KTLPAGTELTVVETDSHDPT 277
Query: 97 WRQIRDFDGTI---GWINKSLLS 116
W ++ D +G G++ S L+
Sbjct: 278 WVRV-DLEGDGLLDGYVFASFLA 299
>gi|90578197|ref|ZP_01234008.1| hypothetical protein VAS14_14139 [Vibrio angustum S14]
gi|90441283|gb|EAS66463.1| hypothetical protein VAS14_14139 [Vibrio angustum S14]
Length = 218
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWI 179
+ + N I LY++P++ + ++ ++P V L + W + GWI
Sbjct: 17 MSTAVWAANNTKESIKLYQEPNVSAKVIETIKPDVPLITIYNNEGWSKVGDPSNGQTGWI 76
Query: 180 K 180
+
Sbjct: 77 Q 77
>gi|29378509|gb|AAO83956.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|46906827|ref|YP_013216.1| invasion associated secreted endopeptidase [Listeria monocytogenes
serotype 4b str. F2365]
gi|29378495|gb|AAO83949.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378499|gb|AAO83951.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378501|gb|AAO83952.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378505|gb|AAO83954.1| invasion associated protein p60 [Listeria monocytogenes]
gi|46880093|gb|AAT03393.1| protein P60 [Listeria monocytogenes serotype 4b str. F2365]
Length = 477
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|291483301|dbj|BAI84376.1| hypothetical protein BSNT_01425 [Bacillus subtilis subsp. natto
BEST195]
Length = 172
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 54/171 (31%), Gaps = 21/171 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRF-VT--------IKASRANSRIGPGIMYTVV 78
LA+ L H + PL V+ IKA + N R P ++
Sbjct: 6 VMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDIL 65
Query: 79 CTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T ++ V+V + +W QI F G +I+ L S + P N
Sbjct: 66 GT-VSSEQKVKVDRFVNADWAQIH-FKGKKAYISTHFLMKTASQAKTTKQTAFYAPTPEN 123
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQKI 184
K V + G +G W F +G+I + +
Sbjct: 124 GKAKQLSSGTEVTILGWG-----FSENGGFDFTWAFVDYGGVKGYIHTKDL 169
>gi|159185774|ref|NP_357103.2| hypothetical protein Atu3507 [Agrobacterium tumefaciens str. C58]
gi|159140908|gb|AAK89888.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 259
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G LT+ C + WC ++ GW+ + I
Sbjct: 20 VNMRSGPSTAYPAVVVIPVGAPLTVHGCLSDTPWCDVSFVNGRGWVAGRYI 70
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R GP Y V + G P+ V + W + +G GW+ +
Sbjct: 20 VNMRSGPSTAYPAV-VVIPVGAPLTVHGCLSDTPWCDVSFVNG-RGWVAGRYI 70
>gi|256060857|ref|ZP_05451017.1| SH3 type 3 domain protein [Brucella neotomae 5K33]
gi|261324853|ref|ZP_05964050.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261300833|gb|EEY04330.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
Length = 170
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 29 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|94971374|ref|YP_593422.1| hypothetical protein Acid345_4348 [Candidatus Koribacter versatilis
Ellin345]
gi|94553424|gb|ABF43348.1| hypothetical protein Acid345_4348 [Candidatus Koribacter versatilis
Ellin345]
Length = 410
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 57/144 (39%), Gaps = 13/144 (9%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+L + +L K K+ +V++ +AN R +Y V + G V
Sbjct: 36 SLKVLLPCLFLLFTFACKRGPLKQAEMMYVSV--PQANLRDRVSAVYNKVGV-VYAGDKV 92
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA----------IVSPWNRKTNNPIYINL 138
EV+++ + + ++ DG GW+ L+G+ A + +N+
Sbjct: 93 EVLEKQKRFIHVKTKDGRDGWLELRYLAGQDVADGFDKLKTDNAKTIVQAHGTTRAELNI 152
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRE 162
+ PD + + +++ G + + +
Sbjct: 153 HLTPDREGDHLYQMKEGEKVEVLK 176
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
E+W +R+ G +GW+ ++ ++ + Y L K PD + +
Sbjct: 235 MEDWFLVRNSQGYVGWVLARMVDIDVPLDIAQYAEGQRIMGYFILNKVPDEDKQVAQYL- 293
Query: 154 PGVLLTIRECSG-----------EWCFGYNLDTEGWIKKQKIWGIYP 189
+L G W + + +++ +WG+YP
Sbjct: 294 ---VLMAAPRDGLPYDYDSIRVFSWNLKRHRYETAY-RERNLWGVYP 336
>gi|82699620|ref|YP_414194.1| hypothetical protein BAB1_0757 [Brucella melitensis biovar Abortus
2308]
gi|189023941|ref|YP_001934709.1| SH3 domain protein [Brucella abortus S19]
gi|254689002|ref|ZP_05152256.1| Bacterial SH3-like region [Brucella abortus bv. 6 str. 870]
gi|254697137|ref|ZP_05158965.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
gi|254730034|ref|ZP_05188612.1| Bacterial SH3-like region [Brucella abortus bv. 4 str. 292]
gi|256257251|ref|ZP_05462787.1| Bacterial SH3-like region [Brucella abortus bv. 9 str. C68]
gi|260545554|ref|ZP_05821295.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|260754496|ref|ZP_05866844.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260757716|ref|ZP_05870064.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761542|ref|ZP_05873885.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883524|ref|ZP_05895138.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297248100|ref|ZP_06931818.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|82615721|emb|CAJ10713.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|189019513|gb|ACD72235.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260096961|gb|EEW80836.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|260668034|gb|EEX54974.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260671974|gb|EEX58795.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674604|gb|EEX61425.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873052|gb|EEX80121.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297175269|gb|EFH34616.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 203
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 29 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|295136345|ref|YP_003587021.1| M23 family peptidase [Zunongwangia profunda SM-A87]
gi|294984360|gb|ADF54825.1| M23 family peptidase [Zunongwangia profunda SM-A87]
Length = 376
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 61 KASRANSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
K+S AN R P ++ K ++++ + +W +R + + ++++SL++
Sbjct: 319 KSSVANLRNQPNTSTSQILGQAKNKDT-LQLLGKTGDWFHVRPKNKSASFVHESLVA 374
>gi|29378497|gb|AAO83950.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|16330109|ref|NP_440837.1| hypothetical protein slr1232 [Synechocystis sp. PCC 6803]
gi|1652596|dbj|BAA17517.1| slr1232 [Synechocystis sp. PCC 6803]
Length = 178
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 2/125 (1%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R R P L G PV + + + +G GW+ + L G
Sbjct: 52 TGRVYLRDRPSNASQNANRTLANGTPVRGYEYRNGFVFVETVNGFSGWVTERYLCGSSPV 111
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQS-IIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
SP + L +P S + G ++ S + GW+
Sbjct: 112 GSSPSYICGAETGRVYLRDRPSNSSQNANRTLSNGTAVSTEGYSNGFFLVETMDGMRGWV 171
Query: 180 KKQKI 184
++ +
Sbjct: 172 TERYV 176
>gi|255008194|ref|ZP_05280320.1| hypothetical protein Bfra3_03581 [Bacteroides fragilis 3_1_12]
Length = 266
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 6/76 (7%), Positives = 25/76 (32%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ +L+ + + P +N+ + ++ ++ ++ + W
Sbjct: 14 WVLFLILNFSLCTQSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWA 73
Query: 169 FGYNLDTEGWIKKQKI 184
+G++ +
Sbjct: 74 NINYNGWQGYVSASYL 89
>gi|29378507|gb|AAO83955.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|332293375|ref|YP_004431984.1| NLP/P60 protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171461|gb|AEE20716.1| NLP/P60 protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 249
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQK 183
+ + +P S +V +V G + E +W + EGWI ++
Sbjct: 11 VPMRAEPSDPSELVNQVLYGEHFKVVEQRKQWSRIKLSHDKYEGWIDNKQ 60
>gi|254707035|ref|ZP_05168863.1| SH3 type 3 domain protein [Brucella pinnipedialis M163/99/10]
gi|261314502|ref|ZP_05953699.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261303528|gb|EEY07025.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
Length = 158
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 17 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 69
>gi|307307911|ref|ZP_07587636.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
gi|306901527|gb|EFN32130.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
Length = 380
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L +PD +S VA ++ G + I W T G++ + ++
Sbjct: 237 KGRAALRSRPDNKSNTVATLKNGAPVDILASVDRWFEVRQAGTNGFLHETQV 288
>gi|168181402|ref|ZP_02616066.1| transporter, major facilitator family [Clostridium botulinum Bf]
gi|182675251|gb|EDT87212.1| transporter, major facilitator family [Clostridium botulinum Bf]
Length = 257
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
WIN L GK I N P +N+ +K S I+ + G + +
Sbjct: 185 STNNSSWIN---LDGKTGTI--------NTPSGVNIREKKSTSSRILGALPNGSKVQLYR 233
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + +
Sbjct: 234 KEGDWIHIYYPPHGGYVYGKYV 255
>gi|168178756|ref|ZP_02613420.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
gi|182671161|gb|EDT83135.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
Length = 255
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
WIN L GK I N P +N+ +K S I+ + G + +
Sbjct: 183 STNNSSWIN---LDGKTGTI--------NTPSGVNIREKKSTSSRILGALPNGSKVQLYR 231
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + +
Sbjct: 232 KEGDWIHIYYPPHGGYVYGKYV 253
>gi|228988494|ref|ZP_04148583.1| Teichoic acids export ATP-binding protein tagH [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771210|gb|EEM19687.1| Teichoic acids export ATP-binding protein tagH [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 555
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 33/151 (21%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPIL------------ALSHEKEIFEKKPLP 55
L ++ K + + L I A +KE +K +P
Sbjct: 284 SLLRKQSSHHIKKKKGRKFLSVFILLMMLGGITYWQKDNILHSLQAKEQKKESIDKVEVP 343
Query: 56 ------------RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE------NW 97
R+V +++ R P + VV T L G P V ++ + NW
Sbjct: 344 KKEENPLATLDVRYV--NSAKGRVRSKPNLDGQVVGTILF-GTPFIVKEQQKEIESDINW 400
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
++ +G GWI++S++ +N+
Sbjct: 401 LKLTLENGEEGWISESIVKSIPYNQTISYNK 431
>gi|229158831|ref|ZP_04286889.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
ATCC 4342]
gi|228624815|gb|EEK81584.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
ATCC 4342]
Length = 555
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 33/151 (21%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPIL------------ALSHEKEIFEKKPLP 55
L ++ K + + L I A +KE +K +P
Sbjct: 284 SLLRKQSSHHIKKKKGRKFLSVFILLMMLGGITYWQKDNILHSLQAKEQKKESIDKVEVP 343
Query: 56 ------------RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE------NW 97
R+V +++ R P + VV T L G P V ++ + NW
Sbjct: 344 KKEENPLATLDVRYV--NSAKGRVRSKPNLDGQVVGTILF-GTPFIVKEQQKEIESDINW 400
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
++ +G GWI++S++ +N+
Sbjct: 401 LKLTLENGEEGWISESIVKSIPYNQTISYNK 431
>gi|29378489|gb|AAO83946.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 173
>gi|319405438|emb|CBI79057.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 217
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 16/61 (26%), Gaps = 2/61 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ L P + A V G + I C WC + + GW
Sbjct: 29 AAGTVAKIEKGKAILRAGPATTYKVTAIVPTGTKVQINGCLANKVWCLLQHNEMVGWASA 88
Query: 182 Q 182
Sbjct: 89 N 89
>gi|304392161|ref|ZP_07374103.1| putative enterotoxin FM [Ahrensia sp. R2A130]
gi|303296390|gb|EFL90748.1| putative enterotoxin FM [Ahrensia sp. R2A130]
Length = 117
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDT 175
+N+ P S I V + ++ C +WC
Sbjct: 31 HVQKQARTHAIAYNDVLNVRAWPAASSRIKFGVNNNRKVYVQRCIIKSGTDWCKIRRGGR 90
Query: 176 EGWIKKQKIWGIYPGEVF 193
GW+ + I I GE F
Sbjct: 91 TGWVNGRYI--IKGGETF 106
>gi|237815183|ref|ZP_04594181.1| SH3-like region containing protein [Brucella abortus str. 2308 A]
gi|237790020|gb|EEP64230.1| SH3-like region containing protein [Brucella abortus str. 2308 A]
Length = 199
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 25 TNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|323137659|ref|ZP_08072735.1| hypothetical protein Met49242DRAFT_2123 [Methylocystis sp. ATCC
49242]
gi|322396956|gb|EFX99481.1| hypothetical protein Met49242DRAFT_2123 [Methylocystis sp. ATCC
49242]
Length = 125
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L+ +P + + + G ++ I +C WC+ + G+I +
Sbjct: 33 PLHNRPHGRH--LMTLGYGDIVNIDKCDHSWCWVTHGPHAGYIYMSHV 78
>gi|297585340|ref|YP_003701120.1| cell wall hydrolase/autolysin [Bacillus selenitireducens MLS10]
gi|297143797|gb|ADI00555.1| cell wall hydrolase/autolysin [Bacillus selenitireducens MLS10]
Length = 472
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ AS N R P + L K PV+++ E W +I + GT +++ S +
Sbjct: 217 VTASSLNVRPLPNTTRDPIGR-LPKYSPVKILDESNGWARIE-YKGTTAYVSMSFIRK 272
>gi|326336024|ref|ZP_08202200.1| bacterial SH3 domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691821|gb|EGD33784.1| bacterial SH3 domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 266
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGEVF 193
N+ K P+ ++ I+ K+ E W +G++ K +I + E+
Sbjct: 32 TNIRKSPNSKAEIIGKLLKNEYFFYIENPSGWYEVSTQRKVQGFVHKSRIQKVDDKELI 90
>gi|84500642|ref|ZP_00998891.1| hypothetical protein OB2597_11806 [Oceanicola batsensis HTCC2597]
gi|84391595|gb|EAQ03927.1| hypothetical protein OB2597_11806 [Oceanicola batsensis HTCC2597]
Length = 205
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 8/78 (10%)
Query: 115 LSGKRSAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGE 166
LSG A+ P+ +N+ +PD ++ I+ P GV + G
Sbjct: 12 LSGGPVAVAEPFPALYDVVGVARDDVLNIRAEPDARAEILGTFAPDRRGVEVGAVSDDGG 71
Query: 167 WCFGYNLDTEGWIKKQKI 184
W GW +
Sbjct: 72 WGQVNAGGRSGWASLTYL 89
>gi|170760439|ref|YP_001786851.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A3 str.
Loch Maree]
gi|169407428|gb|ACA55839.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A3 str.
Loch Maree]
Length = 252
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
WIN L GK I +P +N+ +K I S I+ + G + +
Sbjct: 182 NNNSWIN---LDGKTGTICTPSG--------VNVREKKSISSKILGALPNGTKVRLYRKE 230
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
GEW Y G+I ++ +
Sbjct: 231 GEWMHVYYPSHGGYIYEKYV 250
>gi|320354410|ref|YP_004195749.1| hypothetical protein Despr_2315 [Desulfobulbus propionicus DSM
2032]
gi|320122912|gb|ADW18458.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 224
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 10/121 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M + + LA+ + A A + ++ K L R G
Sbjct: 1 MMTTLFSRPRLAILALPLFCALAAASARADILYIKPSL---------EVLMRKNQGDNAR 51
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
VV L G V +++ + W IR DGT GW+ L V+ +
Sbjct: 52 VV-ARLPMGTAVNLIQGGKEWSHIRLQDGTQGWVRSRFLGSSPIIPVANIKPGVGPDGKV 110
Query: 137 N 137
N
Sbjct: 111 N 111
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + + K + +VA++ G + + + EW T+GW++ + +
Sbjct: 38 LEVLMRKNQGDNARVVARLPMGTAVNLIQGGKEWSHIRLQDGTQGWVRSRFL 89
>gi|304392374|ref|ZP_07374315.1| NLP/P60 protein [Ahrensia sp. R2A130]
gi|303295478|gb|EFL89837.1| NLP/P60 protein [Ahrensia sp. R2A130]
Length = 274
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
P I+L + PD S I + G LL I E W + GW
Sbjct: 19 PGETGRVVKSVIDLRRMPDATSGIDTQGIYGQLLVILERKNGWAWVQLAHDGYVGW 74
>gi|255533365|ref|YP_003093737.1| SH3 type 3 domain-containing protein [Pedobacter heparinus DSM
2366]
gi|255346349|gb|ACU05675.1| SH3 type 3 domain protein [Pedobacter heparinus DSM 2366]
Length = 140
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
VT +S N R GP +V + V +V + + W QI+ G G+ L+
Sbjct: 79 VTTNSSNLNIRKGPSTNDDIVGK-AARNEVVTLVSKANDQWWQIKTDQGEEGYSYTQYLT 137
>gi|319898673|ref|YP_004158766.1| hypothetical protein BARCL_0501 [Bartonella clarridgeiae 73]
gi|319402637|emb|CBI76182.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 217
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEG 177
++ + + L P A V G + I C WC + +T G
Sbjct: 25 TSDAAAATVAKIEKGKVLLRAGPSTTYKAAAIVPTGAKVQINGCLANKVWCLLQHNETVG 84
Query: 178 WIKKQ 182
W
Sbjct: 85 WASAN 89
>gi|291522011|emb|CBK80304.1| Predicted glycosyl hydrolase [Coprococcus catus GD/7]
Length = 576
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+K A R G+ V+ TKG + +++ Y++W + DG +GW++ L
Sbjct: 174 VTLKKDTA-VRYKGGVKSEVL-RQATKGEKMVLLEAYDDWSNVATEDGYVGWVSNKTLYD 231
Query: 118 KRSAIVSPWNRKTNNPIYINLYKK 141
+ +P + P Y +++K
Sbjct: 232 AET--ETPEAPAFDEPEYTSIHKD 253
>gi|254486802|ref|ZP_05100007.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043671|gb|EEB84309.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 219
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 120 SAIVS-PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTE 176
+AI + +N+ P Q +V + G + C WC +
Sbjct: 9 TAIPAFAQTTGAIAATDLNIRSGPGPQYDVVGVIPGGEETMVEGCLDTTPWCEVKFGEVT 68
Query: 177 GWIKKQKI 184
GW +
Sbjct: 69 GWSSSDYL 76
>gi|119505060|ref|ZP_01627136.1| SH3 domain protein [marine gamma proteobacterium HTCC2080]
gi|119459042|gb|EAW40141.1| SH3 domain protein [marine gamma proteobacterium HTCC2080]
Length = 234
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLS-GKRSA 121
R G G Y +V L+ G P+ + E W ++ GT GW+ + K S
Sbjct: 42 VPVRSGAGGEYRIVNKGLSSGTPITQFSLSEDGIWAEVETRGGTRGWLRAQYIQVEKPSQ 101
Query: 122 IV---SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ + + D + + + G L +++
Sbjct: 102 LLLQEAERQYAELEADRNKIRSMLDDSQSVAYEAD-GELAELKK 144
>gi|328467410|gb|EGF38486.1| invasion associated secreted endopeptidase [Listeria monocytogenes
1816]
Length = 469
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 139
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 140 KVASTPVAPTQEVKKEITTQQAAPAAETKTEV 171
>gi|328543576|ref|YP_004303685.1| Bacterial SH3-like region [polymorphum gilvum SL003B-26A1]
gi|326413320|gb|ADZ70383.1| Bacterial SH3-like region [Polymorphum gilvum SL003B-26A1]
Length = 187
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+N+ P ++ + G L+ + C+ WC + G++ + + G
Sbjct: 31 VNMRTGPGTGYGVILVIPRGALVEVDSCT-SWCAVWYAGRRGYVSARYVAGA 81
>gi|116873636|ref|YP_850417.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742514|emb|CAK21638.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 375
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--VSPWNRKTNNPIYINLYKKP-DIQSI 147
V + W Q++D TIGWIN ++ ++ + K +Y P + S
Sbjct: 259 VTQKGTWYQLQDQGKTIGWINSKAVNIFYTSKNETNVKLDKYVTESEQKIYAYPVEDNSK 318
Query: 148 IVAKVE--PGVLLTIREC----SGEWCFGYNLDTE--GW 178
+VA + G L I + W N + + GW
Sbjct: 319 VVAALNDYKGKELDIDRRADVKNEYWYRVTNDEGKIIGW 357
>gi|291517994|emb|CBK73215.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Butyrivibrio fibrisolvens 16/4]
Length = 404
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V + W I D G++ + + + A T +++ + S
Sbjct: 131 VEADDGTWLLITSGD-VTGYVKSEYVVQNDEELAKQVSKRLATVTTTTLHVREAASTDSA 189
Query: 148 IVAKVEPG---VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + G V++ + W + EG++ +
Sbjct: 190 VIDLLPIGDDLVVIDESDADNGWVKVTCNEGEGYVSTDYV 229
>gi|229119280|ref|ZP_04248583.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-3]
gi|228664146|gb|EEL19684.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-3]
Length = 318
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN--KSLLSG 117
I N R GP V+ L KG ++ + NW + G WI S +
Sbjct: 186 IDGQNVNLRSGPSTSNNVI-RKLQKGESYKIWGKVGNWLNL----GGNQWIYNDTSYIRY 240
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
K ++ R + + Y K VA
Sbjct: 241 KEESLSVEGKRVVSKVNDLRFYSKASWSDRDVA 273
>gi|196230480|ref|ZP_03129342.1| hypothetical protein CfE428DRAFT_2507 [Chthoniobacter flavus
Ellin428]
gi|196225410|gb|EDY19918.1| hypothetical protein CfE428DRAFT_2507 [Chthoniobacter flavus
Ellin428]
Length = 165
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRIGPGIMYTVVCT 80
+ S + L +LA E P R+V A + GP +
Sbjct: 1 MFRSPLLRLLPALVTMILLAAFSACESNNNIPSGSRWVVSVAKAPFYKFGPVQTFGPDFV 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--L 138
LT+G V +++ + ++ DGT GW++ L K ++ + N TN +N +
Sbjct: 61 -LTEGAEVTMLEHSSGYCRVMTADGTSGWVSTEDLKPKPASYATSRNVSTNYTTQLNRPI 119
Query: 139 YKKPDIQS 146
+ P S
Sbjct: 120 FDTPSSSS 127
>gi|39995535|ref|NP_951486.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982298|gb|AAR33759.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|307634699|gb|ADI83259.2| bacterial SH3 domain lipoprotein, putative [Geobacter
sulfurreducens KN400]
Length = 156
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG---TIGWINKSLLSGK 118
N R G VV L G +E++ + +W ++R G GW+ + + G
Sbjct: 99 VNVRRGSSPRTKVVAV-LKGGTQLELLGKEGSWLRVRWQHGGKTAEGWVYRKFVEGN 154
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY----NLDTEGW 178
V R Y+N+ + ++ +VA ++ G L + G W EGW
Sbjct: 86 VPASLRIGPEHKYVNVRRGSSPRTKVVAVLKGGTQLELLGKEGSWLRVRWQHGGKTAEGW 145
Query: 179 IKKQKIWG 186
+ ++ + G
Sbjct: 146 VYRKFVEG 153
>gi|167949820|ref|ZP_02536894.1| SH3, type 3 domain protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 227
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV--KEYENWRQIRDFDGTIG 108
+P P ++T + R G + ++ L G V+++ + +IR G G
Sbjct: 22 PRPKPAYIT-DTFKVTMRSGESSTHRIL-RMLNSGDQVDLLSTDSESGYSKIRTASGLEG 79
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ L + SA KT L P S +A+++
Sbjct: 80 YVLSRQLMNQPSA---RNQLKTLQQRVHELESAPAELSGKLARLQ 121
>gi|160889567|ref|ZP_02070570.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
gi|270296691|ref|ZP_06202890.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317480059|ref|ZP_07939171.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|156861084|gb|EDO54515.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
gi|270272678|gb|EFA18541.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316903801|gb|EFV25643.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 281
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK-ASRANSRIGPGIMY 75
+ K + + +A +L ++ + + + + R I A R P
Sbjct: 179 FFSKQITGKKVGFIAGIVFLVLVILSNVFAAQQKGELMERNEAIVLAPSVTVRSTPS-ES 237
Query: 76 TVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
L +G VE+ W++IR DG +GW+ S + G
Sbjct: 238 GTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPASAIEG 280
>gi|269836835|ref|YP_003319063.1| hypothetical protein Sthe_0804 [Sphaerobacter thermophilus DSM
20745]
gi|269786098|gb|ACZ38241.1| hypothetical protein Sthe_0804 [Sphaerobacter thermophilus DSM
20745]
Length = 178
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINK 112
V+ N R GP + + L G ++ + E + W + R DGT GWI
Sbjct: 113 VSANTD-VNFRSGPNTISPPI-RTLAPGTLLQFLGEEQQTGNTTWMRCRLEDGTEGWIAA 170
Query: 113 SLLS 116
+L++
Sbjct: 171 TLVA 174
>gi|153933464|ref|YP_001383991.1| hypothetical protein CLB_1669 [Clostridium botulinum A str. ATCC
19397]
gi|153937297|ref|YP_001387535.1| hypothetical protein CLC_1678 [Clostridium botulinum A str. Hall]
gi|226948979|ref|YP_002804070.1| hypothetical protein CLM_1893 [Clostridium botulinum A2 str. Kyoto]
gi|152929508|gb|ABS35008.1| conserved domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152933211|gb|ABS38710.1| conserved domain protein [Clostridium botulinum A str. Hall]
gi|226840823|gb|ACO83489.1| conserved domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 124
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N P +N+ S I+ + G + + GEW + Y G++ + I
Sbjct: 69 NTPSGVNVQSGKSTNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGKYI 122
>gi|238755490|ref|ZP_04616830.1| hypothetical protein yruck0001_3680 [Yersinia ruckeri ATCC 29473]
gi|238706331|gb|EEP98708.1| hypothetical protein yruck0001_3680 [Yersinia ruckeri ATCC 29473]
Length = 196
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
GPG Y ++ T L G V ++ E N+ QIRD G WI LS S V
Sbjct: 26 VHSGPGNQYRILGT-LNAGEEVTLISVNEAANYGQIRDNKGRTTWIPMDQLSQSPSMRV 83
>gi|301054775|ref|YP_003792986.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis CI]
gi|300376944|gb|ADK05848.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus biovar
anthracis str. CI]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|254723262|ref|ZP_05185050.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus anthracis str. A1055]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|228915888|ref|ZP_04079463.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228843706|gb|EEM88780.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|228946911|ref|ZP_04109209.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228812781|gb|EEM59104.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|229092236|ref|ZP_04223417.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock3-42]
gi|228691227|gb|EEL44991.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock3-42]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|228928340|ref|ZP_04091381.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229122821|ref|ZP_04252030.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 95/8201]
gi|228660685|gb|EEL16316.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 95/8201]
gi|228831387|gb|EEM76983.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|229185519|ref|ZP_04312699.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BGSC 6E1]
gi|228597914|gb|EEK55554.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BGSC 6E1]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|225865257|ref|YP_002750635.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
gi|225785703|gb|ACO25920.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|196037986|ref|ZP_03105296.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196031256|gb|EDX69853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|196032055|ref|ZP_03099469.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus W]
gi|195994806|gb|EDX58760.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus W]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|218904427|ref|YP_002452261.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH820]
gi|218537230|gb|ACK89628.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH820]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|118478578|ref|YP_895729.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis str. Al Hakam]
gi|196042628|ref|ZP_03109867.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB108]
gi|118417803|gb|ABK86222.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis str. Al Hakam]
gi|196026112|gb|EDX64780.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB108]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|49479019|ref|YP_037356.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|228934545|ref|ZP_04097380.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|49330575|gb|AAT61221.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|228825182|gb|EEM70979.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|52142261|ref|YP_084569.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus E33L]
gi|51975730|gb|AAU17280.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus E33L]
Length = 591
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 350 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|118593598|ref|ZP_01550975.1| hypothetical protein SIAM614_05391 [Stappia aggregata IAM 12614]
gi|118433816|gb|EAV40476.1| hypothetical protein SIAM614_05391 [Stappia aggregata IAM 12614]
Length = 399
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG-- 177
+ V+ R + + + PD +S + + GV + I W G
Sbjct: 227 TIPVARSGRVRHPKGSVLMKAAPDGKSHSLRRFTNGVAVQITGEEDRWYRVNVAGVTGYM 286
Query: 178 ---WIKKQKIWGIYPGEV 192
WI+ + PGE+
Sbjct: 287 HHTWIRVDQFD-ATPGEL 303
>gi|146302340|ref|YP_001196931.1| NLP/P60 protein [Flavobacterium johnsoniae UW101]
gi|146156758|gb|ABQ07612.1| NLP/P60 protein; dipeptidyl peptidase VI [Flavobacterium johnsoniae
UW101]
Length = 253
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQK 183
+ + + +S IV ++ G + I E +W D EGW+ ++
Sbjct: 10 VPVRAEASDRSEIVTQLLFGEHIEILERHNQWARIRIQYDDYEGWVDSKQ 59
>gi|307132390|ref|YP_003884406.1| putative signal transduction protein (SH3 domain) [Dickeya dadantii
3937]
gi|306529919|gb|ADM99849.1| predicted signal transduction protein (SH3 domain) [Dickeya
dadantii 3937]
Length = 206
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
R GPG Y +V T L G V ++ + QIRD G WI LS S
Sbjct: 37 RSGPGNQYRIVGT-LNAGEAVTLISADAGAGYAQIRDEKGRTSWIQLDQLSQTPSLKTRV 95
Query: 126 WNRKTNNPIYINLYKKPDIQ 145
+ + D
Sbjct: 96 PELENQVKTLTDKLNSVDQD 115
>gi|291537200|emb|CBL10312.1| Cell Wall Hydrolase./Bacterial SH3 domain [Roseburia intestinalis
M50/1]
gi|291540434|emb|CBL13545.1| Cell Wall Hydrolase./Bacterial SH3 domain [Roseburia intestinalis
XB6B4]
Length = 472
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 20/50 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ ++ + + I+ K+ G + + E W + D +G++
Sbjct: 183 ADVDEFLYVRASGGADAEIIGKLYKGDVADVVESGDTWTHVVSGDVDGYV 232
>gi|257125650|ref|YP_003163764.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049589|gb|ACV38773.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 160
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN------L 173
+ + ++ IN+ + S ++ ++ G +L E SG+W
Sbjct: 21 TVSMGASFITSSKDNAINIRESATTDSKVIETIKNGEILESTEKSGDWHKVTYYNSEIKK 80
Query: 174 DTEGWIKKQKI 184
G+I ++
Sbjct: 81 SFTGYIHNSQL 91
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGK 118
N R P + T L G V + + ++W I+ G+I + ++ K
Sbjct: 108 NIREKPTTKSAIK-TRLKTGQTVYAISKTDDDWYYIKFNGNQRGYIYSNQVAKK 160
>gi|56697881|ref|YP_168252.1| dipeptide ABC transporter, permease protein [Ruegeria pomeroyi
DSS-3]
gi|56679618|gb|AAV96284.1| dipeptide ABC transporter, permease protein [Ruegeria pomeroyi
DSS-3]
Length = 379
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 17/150 (11%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
+++ + +R ++ + L L+ + F + + L +P + +
Sbjct: 10 RPALIFGVAMRHFILRRLAVMLLTAACLTFVVFFLTNL-----------MPNLEKLAKTE 58
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF---DGTIGWINKSLLSGKRSA 121
AN+R+ V+ +G ++ +Y W + +G G + +R+A
Sbjct: 59 ANARM---SDAEVLSWLTERGYTQDIFTKYGEWLGVVPSSRVNGGDGELYTRCARPERTA 115
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
V+P + + S ++AK
Sbjct: 116 EVAPHYCGVLQGEFGFSTVFKEEVSTVIAK 145
>gi|42780060|ref|NP_977307.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10987]
gi|42735978|gb|AAS39915.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus cereus ATCC
10987]
Length = 529
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W ++ G W +
Sbjct: 219 PSLSSGITDVQHKPQMVVVKEQRADGWLKVVTSKGEK-W-------------TPLTEKTE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 265 TINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|229159961|ref|ZP_04287966.1| Uncharacterized cell wall amidase [Bacillus cereus R309803]
gi|228623484|gb|EEK80305.1| Uncharacterized cell wall amidase [Bacillus cereus R309803]
Length = 538
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + V V +E + W +I G W +
Sbjct: 231 PSLSSGITDVQHEP-QKVVVKEERDGWIKIVTSKGDK-W-------------TPLKEKTE 275
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++AK + I E W W+ K ++
Sbjct: 276 VIKEEFTTYAEASHSSKVLAKRAAQTVTVIEE-KDSWIRIRTNSGFQWLDKNQL 328
>gi|220920084|ref|YP_002495385.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219944690|gb|ACL55082.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 442
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 17/55 (30%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R P V L V+ W +R G GW++ + R A
Sbjct: 384 LRSRPSASEGVRLMKLGPDSLFTVLGRQGVWLNVRLRTGETGWVHGDYVGCCRRA 438
>gi|148378746|ref|YP_001253287.1| hypothetical protein CBO0748 [Clostridium botulinum A str. ATCC
3502]
gi|153933168|ref|YP_001383133.1| hypothetical protein CLB_0790 [Clostridium botulinum A str. ATCC
19397]
gi|153937815|ref|YP_001386681.1| hypothetical protein CLC_0805 [Clostridium botulinum A str. Hall]
gi|148288230|emb|CAL82302.1| putative phage-related protein [Clostridium botulinum A str. ATCC
3502]
gi|152929212|gb|ABS34712.1| hypothetical protein CLB_0790 [Clostridium botulinum A str. ATCC
19397]
gi|152933729|gb|ABS39228.1| hypothetical protein CLC_0805 [Clostridium botulinum A str. Hall]
Length = 113
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKK 181
+N+ + P + S I+ +++ G + I + +W + GW+ +
Sbjct: 56 TADVLNVRQSPSMSSNILGQLDYGERVDIVRLWGNDDWIMIEFEGSIGWVAR 107
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 17 YMPKILQNSLIFT--LAIYFYLAPILALSHEKEIFEKKPL-------PRFVT--IKASRA 65
+ K L +L L + + A + + K + P + A
Sbjct: 1 MIKKKLAGALAICSFLTLTYGTTAFAANDSTNNVVQNKNVIQSSWKGPYQAVGMVTADVL 60
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R P + ++ L G V++V+ + N W I F+G+IGW+ + +
Sbjct: 61 NVRQSPSMSSNILGQ-LDYGERVDIVRLWGNDDWIMIE-FEGSIGWVARPFV 110
>gi|291460403|ref|ZP_06599793.1| NlpC/P60 family protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416970|gb|EFE90689.1| NlpC/P60 family protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 540
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+ N R P G ++ E W +I+ G++ L++
Sbjct: 257 VSKAGDYINIRSSPEEDGIRNIVGKFPGFAGGNILGEENGWYKIQ-SGAVTGYVKAELVA 315
Query: 117 ----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+R A+ + N +N+ +P +S ++ + W
Sbjct: 316 TGAEAERLAVDNAQVMAIVNTNSLNVRSEPSTESRAWTQITKDQRYLVVNQLDGWVQ 372
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 39/134 (29%), Gaps = 26/134 (19%)
Query: 62 ASRANSRIGPG-IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------- 113
AS N R P T + L G V++ + D +G GW +
Sbjct: 92 ASYINFRSKPNQTDITNIMGMLKDGAAVDIEE--------IDPEGAQGWAHVRSGGMDGY 143
Query: 114 -----LLSG---KRSAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRECS 164
LL G K A R + + P+ V G + +
Sbjct: 144 ISTSFLLGGEEAKEKAKTLLAPRAKVLADKLRIRSTPEISDGNTVGSAAAGETYQLIGRA 203
Query: 165 G-EWCFGYNLDTEG 177
G +W + +G
Sbjct: 204 GRDWVEITVDNIDG 217
>gi|284053009|ref|ZP_06383219.1| hypothetical protein AplaP_16188 [Arthrospira platensis str.
Paraca]
gi|291567277|dbj|BAI89549.1| SH3 type 3 domain protein [Arthrospira platensis NIES-39]
Length = 98
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ ++ ++ P F S+ N R GPG Y+V Y G V+V+
Sbjct: 7 LVSAGLSMVIIAAAVVPAWAYPARLFANDAGSQINIRSGPGTNYSVA-HYGYAGDYVDVI 65
Query: 92 KEY----ENWRQIRDFDG-TIGWINKSLLS 116
E W + GW+ ++
Sbjct: 66 NERVVNGYKWYYVEFPASKARGWVRGDFIT 95
>gi|30263243|ref|NP_845620.1| S-layer protein, putative [Bacillus anthracis str. Ames]
gi|49186094|ref|YP_029346.1| S-layer protein [Bacillus anthracis str. Sterne]
gi|65320575|ref|ZP_00393534.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
gi|227813887|ref|YP_002813896.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. CDC
684]
gi|254685856|ref|ZP_05149715.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str.
CNEVA-9066]
gi|254738327|ref|ZP_05196030.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Western
North America USA6153]
gi|254752643|ref|ZP_05204679.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Vollum]
gi|254761158|ref|ZP_05213182.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str.
Australia 94]
gi|30257877|gb|AAP27106.1| putative S-layer protein [Bacillus anthracis str. Ames]
gi|49180021|gb|AAT55397.1| S-layer protein, putative [Bacillus anthracis str. Sterne]
gi|227004706|gb|ACP14449.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. CDC
684]
Length = 338
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 97 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 145
>gi|320119745|gb|ADW15971.1| invasion associated protein [Listeria monocytogenes]
Length = 201
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 65 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 123
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 124 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 155
>gi|83318892|emb|CAJ01899.1| P60 protein [Listeria monocytogenes]
gi|114150004|gb|ABI51620.1| P60 protein [Listeria monocytogenes]
Length = 374
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 81 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 139
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 140 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 171
>gi|29378551|gb|AAO83977.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRSGTGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 141
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 142 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 173
>gi|332653869|ref|ZP_08419613.1| putative N-acetylmuramoyl-L-alanine amidase [Ruminococcaceae
bacterium D16]
gi|332516955|gb|EGJ46560.1| putative N-acetylmuramoyl-L-alanine amidase [Ruminococcaceae
bacterium D16]
Length = 334
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 9/84 (10%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-- 96
+ + V A N R GPG Y V KG+ +V E
Sbjct: 254 WVNAADISTGSTGTATSYRVRTTADVLNIRKGPGTNYGVAGQIKGKGI-YTIVAEAAGPG 312
Query: 97 ---WRQIRDFDGTIGWINKSLLSG 117
W +++ GWI+ ++
Sbjct: 313 ATKWGKLK---SGAGWISLDYVTK 333
>gi|302034295|gb|ADK92301.1| invasion associated protein [Listeria monocytogenes]
gi|302034297|gb|ADK92302.1| invasion associated protein [Listeria monocytogenes]
Length = 223
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 73 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 131
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 132 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 163
>gi|271501859|ref|YP_003334885.1| SH3 domain-containing protein [Dickeya dadantii Ech586]
gi|270345414|gb|ACZ78179.1| SH3 domain protein [Dickeya dadantii Ech586]
Length = 207
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
R GPG Y ++ T L G V +V + N+ +IRD G WI LS S
Sbjct: 38 RSGPGNQYRIIGT-LNAGEAVTLVSVNDGANYAEIRDDKGRTSWIPLDQLSQTPSLKTRV 96
Query: 126 WNRKTNNPIYINLYKKPDIQ 145
+ + D
Sbjct: 97 PELENQVKSLTDKLNSVDQD 116
>gi|254742507|ref|ZP_05200192.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus anthracis str. Kruger B]
Length = 338
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+K N R G G+ + V + G +V+ W ++ G WI +
Sbjct: 97 VKGDGINVRSGAGLEHQTV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 145
>gi|260817840|ref|XP_002603793.1| hypothetical protein BRAFLDRAFT_86624 [Branchiostoma floridae]
gi|229289116|gb|EEN59804.1| hypothetical protein BRAFLDRAFT_86624 [Branchiostoma floridae]
Length = 1371
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 4/106 (3%)
Query: 82 LTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ G V+V+++ EN W + + GW+ + L R +
Sbjct: 132 VKAGTTVDVIEKNENGWWFVT-VEDEQGWVPATFLDRADGLTEEITRRSRAGEGEQYVTT 190
Query: 141 KP-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + + GV + + E + W + D EGW +
Sbjct: 191 NAYNARGGDEVGFDRGVNVEVLEKNLEGWWYIRYQDVEGWAPSTYL 236
>gi|163868823|ref|YP_001610049.1| hypothetical protein Btr_1769 [Bartonella tribocorum CIP 105476]
gi|161018496|emb|CAK02054.1| hypothetical protein BT_1769 [Bartonella tribocorum CIP 105476]
Length = 226
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
++L P ++A V G + I C + WC GW
Sbjct: 32 TIAGTVARVASGQVSLRTGPATAYKVIAMVPMGAKVQIYGCLSNKTWCSLGYSGKIGWAS 91
Query: 181 KQKI 184
+ +
Sbjct: 92 ARYV 95
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K ++++ A+ + A + + + + + R GP Y
Sbjct: 1 MLRKRFLSTMMTLWALGASGVAMTAFHAQAGTIAGTV----ARVASGQVSLRTGPATAYK 56
Query: 77 VVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
V+ + G V++ N W + + G IGW + ++ V+ N+
Sbjct: 57 VI-AMVPMGAKVQIYGCLSNKTWCSL-GYSGKIGWASARYVNVNNVPTVAFKKMPVNSLK 114
Query: 135 YINLYKKPDIQSI 147
++ I+S
Sbjct: 115 KMSAKSNAIIKSP 127
>gi|302034287|gb|ADK92297.1| invasion associated protein [Listeria monocytogenes]
gi|302034289|gb|ADK92298.1| invasion associated protein [Listeria monocytogenes]
gi|302034291|gb|ADK92299.1| invasion associated protein [Listeria monocytogenes]
gi|302034293|gb|ADK92300.1| invasion associated protein [Listeria monocytogenes]
gi|302034299|gb|ADK92303.1| invasion associated protein [Listeria monocytogenes]
gi|302034301|gb|ADK92304.1| invasion associated protein [Listeria monocytogenes]
gi|302034303|gb|ADK92305.1| invasion associated protein [Listeria monocytogenes]
gi|302034305|gb|ADK92306.1| invasion associated protein [Listeria monocytogenes]
Length = 224
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 74 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 132
Query: 118 K 118
K
Sbjct: 133 K 133
>gi|229111121|ref|ZP_04240678.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
gi|228672285|gb|EEL27572.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
Length = 347
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 12/96 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRS-A 121
N R GP +V+ L KG +V + NW + G WI S + + A
Sbjct: 219 VNLRSGPSTDNSVI-RKLQKGEAYKVWGKLGNWLNL----GGNQWIYYDSSYIRYNGTNA 273
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + + Y P Q VA GV+
Sbjct: 274 STITGKRVISKVDNLRFYDSPSWQDKDVA----GVV 305
>gi|226325111|ref|ZP_03800629.1| hypothetical protein COPCOM_02903 [Coprococcus comes ATCC 27758]
gi|225206459|gb|EEG88813.1| hypothetical protein COPCOM_02903 [Coprococcus comes ATCC 27758]
Length = 530
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFG 170
K ++ K A+VS T+ +N+ ++ + S +V + G L I + +W +
Sbjct: 176 KQTVADKEPALVS-DQLDTDKKGILNIQEEKNADSRVVGTMTAGELCYILADEDSDWVYV 234
Query: 171 YNLDTEGWIKKQKI 184
+ D G+ +K+ +
Sbjct: 235 ESGDVRGFAEKKYL 248
>gi|210622237|ref|ZP_03293027.1| hypothetical protein CLOHIR_00974 [Clostridium hiranonis DSM 13275]
gi|210154371|gb|EEA85377.1| hypothetical protein CLOHIR_00974 [Clostridium hiranonis DSM 13275]
Length = 311
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 18/109 (16%)
Query: 73 IMYTVVCTYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
+ V + G V EVVK + + + DGT + +R A V
Sbjct: 86 TINKVDYFFKADGTLVANEVVKTTDGIFRF-NADGTK-------VKNERYAEVV------ 131
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
N ++ + + + +S +++PG L+ I + W GW
Sbjct: 132 -NCDFLAVRAEANAKSAEKGRLKPGELVKITGEANGWNKVETLNGLNGW 179
>gi|30249029|ref|NP_841099.1| hypothetical protein NE1026 [Nitrosomonas europaea ATCC 19718]
gi|30138646|emb|CAD84937.1| hypothetical protein NE1026 [Nitrosomonas europaea ATCC 19718]
Length = 277
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
I+L P S ++ +E LT SG W D GWI+ Q +
Sbjct: 216 TISLRADPTDHSRVIGSLEKDTPLTATAYSGNWLRVQTRDDLSGWIQSQSV 266
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+ R ++++A P V+ + L K P+ NW +++ D GWI
Sbjct: 213 VTRTISLRAD-------PTDHSRVIGS-LEKDTPLTATAYSGNWLRVQTRDDLSGWIQS 263
>gi|332652500|ref|ZP_08418245.1| putative cell surface SD repeat protein [Ruminococcaceae bacterium
D16]
gi|332517646|gb|EGJ47249.1| putative cell surface SD repeat protein [Ruminococcaceae bacterium
D16]
Length = 146
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDG----TIGWINKSLLSGK 118
N R GPG Y G V V+++ N W +I+ G G++ S L K
Sbjct: 90 NIRSGPGTNYETK-ASTEDGATVTVLEDAGNGWTKIKYATGGGNFDEGYVMTSYLQAK 146
>gi|152974548|ref|YP_001374065.1| cell wall hydrolase/autolysin [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023300|gb|ABS21070.1| cell wall hydrolase/autolysin [Bacillus cytotoxicus NVH 391-98]
Length = 520
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W +I G W +K
Sbjct: 219 PSLSSGITSNQHAPQMIVVKEEREDGWLKIVTDKGDK-W-------------TPLQEKKE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y++ S I+ P + T+ E SG W W+ K ++
Sbjct: 265 TIHSAFTTYQEASHSSKILGTYAPQTV-TVIEESGSWIRIRTSSGFQWVDKNQL 317
>gi|294506432|ref|YP_003570490.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
gi|294342760|emb|CBH23538.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
Length = 304
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L+ + + + + ++ + C +WC T G++ +
Sbjct: 92 AEDAATLHNRSGLNAPVT-RLAMRTPVRRLSCEADWCRVRTDGGTTGYVAADAL 144
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 14/137 (10%)
Query: 31 AIYFYLAPILA-LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
A+ AP L+ + E PL +V A+ ++R G + V T L PV
Sbjct: 64 AVASSPAPASGDLAEQGGALEATPL-FYVAEDAATLHNRSG--LNAPV--TRLAMRTPVR 118
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ +W ++R GT G++ LS W R + + +Y+ ++
Sbjct: 119 RLSCEADWCRVRTDGGTTGYVAADALSN-------VWIRVSKRKRRVYVYRGAELAHAFE 171
Query: 150 AKVEPGVLLTIRECSGE 166
A + ++ +G
Sbjct: 172 ADMAYNAFAD-KKRNGG 187
>gi|228949253|ref|ZP_04111517.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810379|gb|EEM56736.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 943
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
+VT++++ P + + G +EV+ + W Q++ + G +G++ +S+
Sbjct: 125 WVTLRSAVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVK-YQGEVGYVRIFESV 183
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ I +K P+ + L + +W
Sbjct: 184 VIGESPVRSWDVTKEATNLSHFIITEYHKDPEKYFPPNIQKKFDKQLDSDLALLANGLKW 243
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 244 IDQLKEALYLDNKQGWVQEEGKW 266
>gi|255279910|ref|ZP_05344465.1| bacterial SH3 domain protein [Bryantella formatexigens DSM 14469]
gi|255269683|gb|EET62888.1| bacterial SH3 domain protein [Bryantella formatexigens DSM 14469]
Length = 449
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++ I+ ++ G + G W G++ + +
Sbjct: 156 VNVRSSAGVEGDILGTLQTGEGVTVTGNREGNWVEVSYNGQTGYVSQNYL 205
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLS 116
N R G G + + L+ G V V +N W Q+ +DG G++ + LS
Sbjct: 276 YATGDVNVRSGAGTNNSRIG-GLSAGSSVTVTGSTDNGWIQVS-YDGQTGYVAGNYLS 331
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
V+ + +N+ + + + G +T+ W G++
Sbjct: 268 VTAMSGTMYATGDVNVRSGAGTNNSRIGGLSAGSSVTVTGSTDNGWIQVSYDGQTGYVAG 327
Query: 182 QKI-W 185
+ W
Sbjct: 328 NYLSW 332
>gi|56694969|ref|YP_165314.1| hypothetical protein SPO0041 [Ruegeria pomeroyi DSS-3]
gi|56676706|gb|AAV93372.1| conserved domain protein [Ruegeria pomeroyi DSS-3]
Length = 194
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ + P S ++ + P GV + G+W +T GW+
Sbjct: 27 TGVAADDVLNVREDPSAGSEVIGTLAPDAVGVEVVDLTFGGDWGRVNVNETSGWV 81
>gi|319776496|ref|YP_004138984.1| hypothetical protein HICON_00350 [Haemophilus influenzae F3047]
gi|317451087|emb|CBY87320.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 203
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|255023786|ref|ZP_05295772.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J1-208]
Length = 147
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 83 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 141
Query: 118 K 118
K
Sbjct: 142 K 142
>gi|56698536|ref|YP_168912.1| NLP/P60 family protein [Ruegeria pomeroyi DSS-3]
gi|56680273|gb|AAV96939.1| NLP/P60 family protein [Ruegeria pomeroyi DSS-3]
Length = 249
Score = 37.7 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 88 VEVVKEYENWRQIR-DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
VE+++ ENW +IR D DG GW+ +L A+ + W + + Y + D++S
Sbjct: 31 VELLERQENWARIRADKDGYEGWLPADVLGA--DAVPTHWVSAPST----HAYARADLKS 84
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + + SG + +G I Q +
Sbjct: 85 PDLMALSFGSRVAVHAVSGRF----AETAQGHIPVQHL 118
>gi|319944710|ref|ZP_08018974.1| SH3 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741959|gb|EFV94382.1| SH3 domain protein [Lautropia mirabilis ATCC 51599]
Length = 279
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
K LY P + ++ P + I C + WC GW+ + +
Sbjct: 36 QTKAFTVQISGLYAGPAPDYPQLERLTPQTSVNILSCLPDFGWCDVAANGFRGWMNARNL 95
>gi|168205308|ref|ZP_02631313.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
gi|170663078|gb|EDT15761.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
Length = 499
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK--RSAI 122
N R P I +V L G +++ + W + +GT G+I + +S ++ +
Sbjct: 127 VNVREMPSINSSVK-DVLQNGTAIKITGKTAQWYSVE-VNGTKGYIFEEYVSETTNKTPV 184
Query: 123 VSPWNRKTNN 132
V+ + +
Sbjct: 185 VNKVAKNDST 194
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
N +N+ + P I S + ++ G + I + +W T+G+I
Sbjct: 122 NVDTMVNVREMPSINSSVKDVLQNGTAIKITGKTAQWYSVEVNGTKGYI 170
>gi|83816729|ref|YP_444677.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
gi|83758123|gb|ABC46236.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
Length = 304
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L+ + + + + ++ + C +WC T G++ +
Sbjct: 92 AEDAATLHNRSGLNAPVT-RLAMRTPVRRLSCEADWCRVRTDGGTTGYVAADAL 144
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 14/137 (10%)
Query: 31 AIYFYLAPILA-LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
A+ AP L+ + E PL +V A+ ++R G + V T L PV
Sbjct: 64 AVAPSPAPASGDLAGQGGALEATPL-FYVAEDAATLHNRSG--LNAPV--TRLAMRTPVR 118
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ +W ++R GT G++ LS W R + + +Y+ ++
Sbjct: 119 RLSCEADWCRVRTDGGTTGYVAADALSN-------VWIRVSKRKRRVYVYRGAELAHAFE 171
Query: 150 AKVEPGVLLTIRECSGE 166
A + ++ +G
Sbjct: 172 ADMAYNAFAD-KKRNGG 187
>gi|15612236|ref|NP_223889.1| hypothetical protein jhp1171 [Helicobacter pylori J99]
gi|4155768|gb|AAD06745.1| putative [Helicobacter pylori J99]
Length = 219
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P ++ + + K V+V++ +W +I T G++
Sbjct: 154 KKPLEYKVAV--SGVNVRAFPSTKGKIIGSLI-KNKSVKVLEIQNDWAEIEFSHETKGYV 210
Query: 111 NKSLLSG 117
LL
Sbjct: 211 FLKLLKK 217
>gi|320119735|gb|ADW15966.1| invasion associated protein [Listeria monocytogenes]
Length = 216
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 66 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 124
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 125 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 156
>gi|283795898|ref|ZP_06345051.1| putative N-acetylmuramoyl-L-alanine amidase domain protein
[Clostridium sp. M62/1]
gi|291076534|gb|EFE13898.1| putative N-acetylmuramoyl-L-alanine amidase domain protein
[Clostridium sp. M62/1]
Length = 511
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +NL + S I+ +++ G +L + EW ++ Q +
Sbjct: 204 TVQENGVNLRAESQTGSRIITQLQAGEVLERTGKNEEWSRVLYDGRTCYVASQYV 258
>gi|50122508|ref|YP_051675.1| putative signal transduction protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613034|emb|CAG76485.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 206
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 13/118 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + ++ + EK + L GPG Y +V T
Sbjct: 1 MQKLGLLCFTLFSLTLSWTTQAEEKRYISDELLTY----------VHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ G V + V E + QIRD WI LS S + +
Sbjct: 50 VNAGTEVTLLSVNEGAGYAQIRDDKNRTTWIPLDQLSNTPSLRTRVPELEKQVKDLTD 107
>gi|302671845|ref|YP_003831805.1| NLPC/P60 domain-containing protein [Butyrivibrio proteoclasticus
B316]
gi|302396318|gb|ADL35223.1| NLPC/P60 domain-containing protein [Butyrivibrio proteoclasticus
B316]
Length = 440
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 39/127 (30%), Gaps = 6/127 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R P +V K + ++E + W +I+ G++ A
Sbjct: 145 TNYVNVRDIPSEEGEIVGKLYDKSVG-TYIEEQDGWYKIQ-SGSVEGFVKAEFCVTGEDA 202
Query: 122 IVSPWNRKTN----NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ T + + + + ++ V L + E W + +G
Sbjct: 203 VELAKEVGTRIATVTTTTLKVRNGAGLDAEVIGLVPIEDELVVEEELDGWVKVSIEEGDG 262
Query: 178 WIKKQKI 184
++ +
Sbjct: 263 YVSTDYV 269
>gi|325578140|ref|ZP_08148275.1| putative signal transduction protein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159876|gb|EGC72005.1| putative signal transduction protein [Haemophilus parainfluenzae
ATCC 33392]
Length = 208
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + G V ++++ + IRD WI S LS S+
Sbjct: 42 LRRGAGDQFKIAGA-IQSGEAVTILEQQGKYTLIRDNKNREAWILTSELSSTPSS 95
>gi|163786705|ref|ZP_02181153.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
gi|159878565|gb|EDP72621.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
Length = 252
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
L +G V+V++ YE+W++I+ D + GW+
Sbjct: 213 LHEGTKVQVLETYEDWKKIQLSDNSTGWV 241
>gi|294054127|ref|YP_003547785.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
akajimensis DSM 45221]
gi|293613460|gb|ADE53615.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
akajimensis DSM 45221]
Length = 853
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+Y + ++ L A++ + +LA + + + +R GPG Y
Sbjct: 754 RYPNRYIRIGLSVQCALFVLASGLLAYRSASQQAD-------AVVVVDSLIARKGPGFGY 806
Query: 76 TVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
L GL + + W ++ DG W+ LS
Sbjct: 807 APAYNEPLNDGLECTQIDQQAQWSLVQLADGRHCWVQTDQLS 848
>gi|260912480|ref|ZP_05919016.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633399|gb|EEX51553.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 857
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+LY R + K+ I AI F L+ I AL + + K+ I A AN
Sbjct: 752 LLYFFSSRILVRKVGFGCAI-AFAILFVLSNIFALYQKNALTSKEG----AIIMAPAANL 806
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
+ P I L +G V++ + W ++ DG GWI ++ +
Sbjct: 807 KKTP-IRSGADEAVLHEGTRVDIADRSIKGWLGVKLTDGREGWIEENTV 854
>gi|261367683|ref|ZP_05980566.1| putative SH3, type 3 [Subdoligranulum variabile DSM 15176]
gi|282570477|gb|EFB76012.1| putative SH3, type 3 [Subdoligranulum variabile DSM 15176]
Length = 447
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWIN 111
P + TI N R GPG Y V + L G VE + + W + D +GW++
Sbjct: 384 PIYRTISYDNLNVRAGPGTEYDKVGSLLP-GSNVEQLGGSSTTDEWIFVAYQDWPLGWVS 442
Query: 112 KSLL 115
L
Sbjct: 443 TEYL 446
>gi|118097916|ref|XP_414847.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 485
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 88 VEVV-KEYENWRQIRDFDGTIGWINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDI 144
VEV+ K+ W + + D I W S L + I + + +Y +
Sbjct: 189 VEVLLKDMTGWWLVENADKQIAWFPASYLEQISAHKDIQNVESSDEEGSLYFVMRAYEAQ 248
Query: 145 QSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIK 180
++ ++ + GV++ + R W +G++
Sbjct: 249 KADELS-LNKGVVVEVVRRSDNGWWLIRYNGRKGYMP 284
>gi|67077960|ref|YP_245580.1| S-layer protein [Bacillus cereus E33L]
gi|66970266|gb|AAY60242.1| possible S-layer protein [Bacillus cereus E33L]
Length = 697
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
++T++++ P + + + G +EV+ + W Q++ + G +G++ +S+
Sbjct: 315 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVK-YQGEVGYVRILESV 373
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI--IVAKVEP--GVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ I K + LT+ +W
Sbjct: 374 VIGESPVRSWDVAKEATNLSHFMITEYHKDPEKYFPKNIEKKFDKQLDSDLTLLANGLQW 433
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 434 IDQLKEALYLDNKQGWVQEEGKW 456
>gi|134093936|ref|YP_001099011.1| hypothetical protein HEAR0690 [Herminiimonas arsenicoxydans]
gi|133737839|emb|CAL60884.1| hypothetical protein HEAR0690 [Herminiimonas arsenicoxydans]
Length = 385
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ Y N+ +P+ QS+IV ++E G + EW + G+I + +I
Sbjct: 323 DDPDGYTNVRVQPNGQSLIVGRMESGTSFRTHPQNSEWWKVRIAGNQTGFIHRSRI 378
>gi|145639915|ref|ZP_01795515.1| hypothetical protein CGSHiII_00557 [Haemophilus influenzae PittII]
gi|145271006|gb|EDK10923.1| hypothetical protein CGSHiII_00557 [Haemophilus influenzae PittII]
gi|309751093|gb|ADO81077.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 203
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|325264265|ref|ZP_08130996.1| glycosyl hydrolase, family 18 [Clostridium sp. D5]
gi|324030336|gb|EGB91620.1| glycosyl hydrolase, family 18 [Clostridium sp. D5]
Length = 646
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+ R G+ ++ + K V ++++ +W ++R DG IG++ S L
Sbjct: 234 VSELKRDTQVRYQGGVKSPIL-AEVKKSEKVRILEDENDWMKVRTSDGVIGYVKTSSLKK 292
Query: 118 KRSAIVSPWNRKTNNPIYINL 138
+R P Y N+
Sbjct: 293 ---ITKETKSRDFQEPDYTNI 310
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + ++S I+A+V+ + I E +W + G++K +
Sbjct: 238 KRDTQVRYQGGVKSPILAEVKKSEKVRILEDENDWMKVRTSDGVIGYVKTSSL 290
>gi|293115790|ref|ZP_05793025.2| cell Wall Hydrolase family protein [Butyrivibrio crossotus DSM
2876]
gi|292808224|gb|EFF67429.1| cell Wall Hydrolase family protein [Butyrivibrio crossotus DSM
2876]
Length = 419
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAI--VSPWNRKTNNPIYINLYKKPDIQ 145
V++ E W +I+ G+I L + I V + N IN+Y + D
Sbjct: 131 VLERGEEWSKIQ-SGKVTGYIRNVDVLFDSEAEVIASVIGNKQAKVNADMINVYAEADDS 189
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +++ +E G + E +G + + G+I
Sbjct: 190 AAVISTLEKGAEIDAYEENGNYTLISCDNGFGYISNDS 227
>gi|118476539|ref|YP_893690.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|118415764|gb|ABK84183.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
Length = 537
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 227 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 271
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+K S ++ + TI E SG W W+ K ++
Sbjct: 272 ETIHEGFTTYEKASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 325
>gi|15808039|ref|NP_296367.1| serine/threonine protein kinase, putative [Deinococcus radiodurans
R1]
Length = 957
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+ L D + + + G + I + W GW+
Sbjct: 463 VVTAPNVTLRSAADAAANSLGTLAAGSTVQILQTQDGWYEVQTTSGQRGWV 513
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ A R + T L G V++++ + W +++ G GW+
Sbjct: 464 VTAPNVTLRSAADAAANSLGT-LAAGSTVQILQTQDGWYEVQTTSGQRGWV 513
>gi|225862860|ref|YP_002748238.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
gi|229183217|ref|ZP_04310447.1| Uncharacterized cell wall amidase [Bacillus cereus BGSC 6E1]
gi|225787678|gb|ACO27895.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
gi|228600356|gb|EEK57946.1| Uncharacterized cell wall amidase [Bacillus cereus BGSC 6E1]
Length = 529
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+K S ++ + TI E SG W W+ K ++
Sbjct: 264 ETIHEGFTTYEKASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|229018900|ref|ZP_04175743.1| 3D domain protein [Bacillus cereus AH1273]
gi|229025144|ref|ZP_04181569.1| 3D domain protein [Bacillus cereus AH1272]
gi|228736153|gb|EEL86723.1| 3D domain protein [Bacillus cereus AH1272]
gi|228742343|gb|EEL92500.1| 3D domain protein [Bacillus cereus AH1273]
Length = 310
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ L K +E + W Q ++G +++ L+G
Sbjct: 87 VAANVLNVRAGANTDSEIIGK-LNKDDVIETTNQVQNEWLQFE-YNGKAAYVHVPFLTGT 144
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
I + T + + + +K
Sbjct: 145 APVIET-KEVVTQEEAPARVKTSVKNNTAVKSK 176
>gi|332289922|ref|YP_004420774.1| putative signal transduction protein [Gallibacterium anatis UMN179]
gi|330432818|gb|AEC17877.1| putative signal transduction protein [Gallibacterium anatis UMN179]
Length = 201
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
F ++V+ + R G G + +V T + G V ++ + + + QIRD G
Sbjct: 19 FSASAETQYVSENLNT-YLRKGAGDQFKLVGT-IKSGEAVTILNKKDKYTQIRDSRNREG 76
Query: 109 WINKSLLSGKRSA 121
WI S L+ S+
Sbjct: 77 WILTSELTPNASS 89
>gi|255023922|ref|ZP_05295908.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes FSL J1-208]
Length = 178
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGWIN + + + K +Y P +
Sbjct: 60 KAVTEKGTWYQLQDQGKTIGWINSNAVEIFYTPQNETNVTLDKYITDSDQKVYAYPVEDN 119
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
S +VA + G L I + W + D + GW
Sbjct: 120 SKVVANLNDYLGKELDIDRRADVKNEYWYRIKSEDGKVIGW 160
>gi|254695044|ref|ZP_05156872.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261215397|ref|ZP_05929678.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917004|gb|EEX83865.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 208
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 20/46 (43%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ +P I + ++ ++ G + + W + GW+ +
Sbjct: 85 VNMRSEPSISAPVITAIDRGKTVKVLNYRSGWFSVSYANRTGWVSE 130
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
++ N R P I V+ T + +G V+V+ W + + GW+++ L+
Sbjct: 82 TAKVNMRSEPSISAPVI-TAIDRGKTVKVLNYRSGWFSVS-YANRTGWVSELYLTENP 137
>gi|224500997|ref|ZP_03669304.1| hypothetical protein LmonFR_00510 [Listeria monocytogenes FSL
R2-561]
Length = 367
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKTIGWVNSNAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 309 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 353
>gi|16804242|ref|NP_465727.1| hypothetical protein lmo2203 [Listeria monocytogenes EGD-e]
gi|16411673|emb|CAD00281.1| lmo2203 [Listeria monocytogenes EGD-e]
Length = 375
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + + K +Y P +
Sbjct: 257 KAVTEKGTWYQLQDQGKTIGWVNSNAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 316
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 317 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 361
>gi|332828791|gb|EGK01483.1| hypothetical protein HMPREF9455_02316 [Dysgonomonas gadei ATCC
BAA-286]
Length = 401
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---- 112
+ I S A+ R+G + T L G PV+V+ ++++W +I+ +G + W
Sbjct: 106 YGVINVSVADVRMGASYAAE-MGTQLLLGAPVQVL-QHDDWWRIKTAEGYVAWTTGGSFV 163
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + ++ + Y+ PD + V+ + G +L + +G +
Sbjct: 164 RMTKDDFNKWITAKKIIFTDDYGFG-YENPDEKKQRVSDLAFGNMLKLEADNGRFYKVSY 222
Query: 173 LDTE-GWIKKQK 183
D ++ K +
Sbjct: 223 PDGRIAYVLKSQ 234
>gi|182624656|ref|ZP_02952438.1| probable enterotoxin [Clostridium perfringens D str. JGS1721]
gi|177910260|gb|EDT72648.1| probable enterotoxin [Clostridium perfringens D str. JGS1721]
Length = 793
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
TN +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VT ++ N R P I ++ L V ++ + +W +I +G G++ L+
Sbjct: 120 VTNVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLN 176
>gi|168216460|ref|ZP_02642085.1| probable enterotoxin [Clostridium perfringens NCTC 8239]
gi|182381425|gb|EDT78904.1| probable enterotoxin [Clostridium perfringens NCTC 8239]
Length = 797
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
TN +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT ++ N R P I ++ L V ++ + +W +I +G G++ L+
Sbjct: 120 VTNVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLNE 177
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
K ++ + N+K+ KK +++ + + + V+
Sbjct: 178 GTMKENSSKTIANKKSEVKFEDKKEKKSSVKTGVKKEAKKEVV 220
>gi|168208963|ref|ZP_02634588.1| conserved domain protein [Clostridium perfringens B str. ATCC 3626]
gi|170712946|gb|EDT25128.1| conserved domain protein [Clostridium perfringens B str. ATCC 3626]
Length = 744
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
TN +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VT ++ N R P I ++ L V ++ + +W +I +G G++ L+
Sbjct: 120 VTNVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLN 176
>gi|110801230|ref|YP_694911.1| hypothetical protein CPF_0454 [Clostridium perfringens ATCC 13124]
gi|110675877|gb|ABG84864.1| putative enterotoxin EntC [Clostridium perfringens ATCC 13124]
Length = 744
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
TN +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
VT ++ N R P I ++ L V ++ + +W +I +G G++ L+
Sbjct: 120 VTNVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLN 176
>gi|18309434|ref|NP_561368.1| enterotoxin [Clostridium perfringens str. 13]
gi|18144110|dbj|BAB80158.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 625
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
TN +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT ++ N R P I ++ L V ++ + +W +I +G G++ L+
Sbjct: 120 VTNVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLNE 177
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
K ++ + N+K+ KK ++ +V GV + + E
Sbjct: 178 GTMKENSSKTIANKKSEVKSKDKKEKKSSVKKEAKKEVVSGVKAKVVQKQRE 229
>gi|268607936|ref|ZP_06141667.1| hypothetical protein RflaF_00360 [Ruminococcus flavefaciens FD-1]
Length = 782
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+NL +KPDI+S I+ ++ G L I C W G++ + I
Sbjct: 610 DTQSGGLNLREKPDIKSAIIDEIPQGTQLDIYMCDTNGWYKTEFKGNTGYVSAEFI 665
>gi|56750825|ref|YP_171526.1| N-acetylmuramoyl-L-alanine amidase [Synechococcus elongatus PCC
6301]
gi|81299525|ref|YP_399733.1| cell wall hydrolase/autolysin [Synechococcus elongatus PCC 7942]
gi|56685784|dbj|BAD79006.1| N-acetylmuramoyl-L-alanine amidase [Synechococcus elongatus PCC
6301]
gi|81168406|gb|ABB56746.1| Cell wall hydrolase/autolysin [Synechococcus elongatus PCC 7942]
Length = 568
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R T+ A A +R GP ++ + T L +G +V+ + W Q+ GW+ S
Sbjct: 207 RVATVTAPEAIARTGPSTDHSRL-TPLPQGTQAQVLGQTGEWLQL----AYGGWMRTS 259
>gi|148828410|ref|YP_001293163.1| hypothetical protein CGSHiGG_10095 [Haemophilus influenzae PittGG]
gi|260580381|ref|ZP_05848210.1| SH3 domain-containing protein [Haemophilus influenzae RdAW]
gi|148719652|gb|ABR00780.1| hypothetical protein CGSHiGG_10095 [Haemophilus influenzae PittGG]
gi|260093058|gb|EEW76992.1| SH3 domain-containing protein [Haemophilus influenzae RdAW]
gi|301170364|emb|CBW29970.1| predicted signal transduction protein (SH3 domain) [Haemophilus
influenzae 10810]
gi|309973278|gb|ADO96479.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 203
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|301168520|emb|CBW28110.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 223
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ LLSGK A+ + +Y+ P + + G + + G+W +
Sbjct: 155 HQLLLSGKSFAVNIKEMK---------IYEGPSSVYDVRVTIPGGSKFILGKSDGDWFYI 205
Query: 171 YNL-DTEGWIKKQKI 184
+ D GW+KK+ I
Sbjct: 206 DHPLDLTGWVKKEDI 220
>gi|70997053|ref|XP_753281.1| NlpC/P60-like cell-wall peptidase [Aspergillus fumigatus Af293]
gi|66850917|gb|EAL91243.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus fumigatus
Af293]
gi|159126995|gb|EDP52111.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus fumigatus
A1163]
Length = 359
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 9/73 (12%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
I+A S + P I N R GPG Y VV +Y KG V +V +
Sbjct: 4 LSIVAASLAAILPSVSAYP----ITGDGVNCRSGPGTNYPVVKSY-PKGHEVSIVCQAPG 58
Query: 97 WRQIRDFDGTIGW 109
D G W
Sbjct: 59 ----TDIKGDKLW 67
>gi|302670235|ref|YP_003830195.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302394708|gb|ADL33613.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 487
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 15/143 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRD-FDGTIGWIN 111
TI N R G G Y V TKG V + E W ++ + G++
Sbjct: 134 ATIITDSVNVRSGAGTSYDSVGK-ATKGETVTITGEATGTDNKTWYKVTFGANSKEGFVR 192
Query: 112 KSLLSGKRSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
L+ + + + + + + + + + + G++
Sbjct: 193 SDLVEISEAVAVEVTEGGEAPAEGGENAEVAEGGEATEEVSVESQQPAVSQ-DQGDGKYS 251
Query: 169 FGYNLDTEGWIKKQKIWGIYPGE 191
Y +G +W +Y E
Sbjct: 252 LKYIAGDDG----NSVWYLYDNE 270
>gi|238796954|ref|ZP_04640458.1| hypothetical protein ymoll0001_33660 [Yersinia mollaretii ATCC
43969]
gi|238719214|gb|EEQ11026.1| hypothetical protein ymoll0001_33660 [Yersinia mollaretii ATCC
43969]
Length = 196
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKS 113
R+++ + GPG Y +V T L G V ++ E N+ QIRD G WI +
Sbjct: 16 RYISDELDT-YVHSGPGNQYRIVGT-LKGGDEVTLISVDEGTNYGQIRDSKGKTIWIPLN 73
Query: 114 LLSGKRSAIVSPWNRKTNNPIYIN 137
LS S + + + +
Sbjct: 74 QLSETPSLRIRVPDLEQQVKTLTD 97
>gi|114777633|ref|ZP_01452614.1| hypothetical protein SPV1_07996 [Mariprofundus ferrooxydans PV-1]
gi|114552104|gb|EAU54621.1| hypothetical protein SPV1_07996 [Mariprofundus ferrooxydans PV-1]
Length = 801
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
A+ +R LY P + +A + G + E G W F +GW
Sbjct: 27 ALADIGDRLEVLENNAVLYAGPSSTASHLASLNAGEQMVEMERQGGWVFVSLKRSGNQGW 86
Query: 179 IKKQKI 184
I +++
Sbjct: 87 ILSRQV 92
>gi|163938796|ref|YP_001643680.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|163860993|gb|ABY42052.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 530
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 16/115 (13%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
GP + V + VEV +E + W +I +G W +
Sbjct: 225 GPSLTSGVSENQHDPQM-VEVKEERDGWIKIATSNGDK-W-------------TPLVEKT 269
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + ++ + I E SG W W+ K ++
Sbjct: 270 EAIKEGFTTYAGASHTAKVLGTYGAQQVTVIEE-SGSWIRIRTTSGFQWVDKNQL 323
>gi|331091979|ref|ZP_08340811.1| hypothetical protein HMPREF9477_01454 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402878|gb|EGG82445.1| hypothetical protein HMPREF9477_01454 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 343
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +++Y D S + KV ++ I E W + D G+IK +
Sbjct: 70 QKALVNTDGEMSIYAAADENSEVAGKVYRNTVVHIEETGEMWSKVSSGDVVGYIKNDNL 128
>gi|228957302|ref|ZP_04119064.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228802388|gb|EEM49243.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 548
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|158520869|ref|YP_001528739.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
gi|158509695|gb|ABW66662.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
Length = 356
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 19/136 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-TY 81
+ + I L + + ++H ++ + + R PG+
Sbjct: 4 KRAGISFLPFLLCIGLCMGIAHAGDVQMGEV--------TTEVKLRRSPGLNGQ--WMET 53
Query: 82 LTKGLPVEVVKEYENWRQI---RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G V + +E +W Q+ ++ G GW K + I +T P+ ++
Sbjct: 54 LAAGQKVIITQETNDWYQVVYEKERYGYKGWAYKKYVK-----ITENAAPETAFPLERSI 108
Query: 139 YKKPDIQSIIVAKVEP 154
P + +E
Sbjct: 109 ATGPTPGVAAKSALEA 124
>gi|20386502|gb|AAM21685.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386504|gb|AAM21686.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386506|gb|AAM21687.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386512|gb|AAM21690.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386514|gb|AAM21691.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386516|gb|AAM21692.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 219
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 75 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 133
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 134 KVASTPVAPTQEVKKETTTQQAAPAAETKTEV 165
>gi|65318312|ref|ZP_00391271.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis
str. A2012]
Length = 427
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 117 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 161
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 162 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 215
>gi|114603383|ref|XP_527118.2| PREDICTED: SH3 and PX domain-containing protein 2B [Pan
troglodytes]
Length = 910
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+G+ V+++++ ++ W + + GW+ + L G+ + Y +Y
Sbjct: 173 ARGIVVDIIEKNDSRWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY 231
Query: 142 PDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 232 -TARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 274
>gi|332703787|ref|ZP_08423875.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553936|gb|EGJ50980.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 223
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V+ K R GP + + ++ + G ++VV+ W ++ ++ T G++ +
Sbjct: 28 YYVSDKF-EITLRSGPTLQHKIL-RMVPTGSRLDVVQNDGEWALVK-WNETEGYVQTRFI 84
Query: 116 SGK-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ + IV +K + + D +
Sbjct: 85 TTELPKEIVIKTLQKRTEQLEQKTSQASDQSGKL 118
>gi|253999444|ref|YP_003051507.1| SH3 type 3 domain-containing protein [Methylovorus sp. SIP3-4]
gi|253986123|gb|ACT50980.1| SH3 type 3 domain protein [Methylovorus sp. SIP3-4]
Length = 169
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
NL K+P + K+ G + I G W GW++
Sbjct: 31 NLRKEPYNDAKTSGKLVRGDKVDILSKQGAWLQIKTSKASGWVR 74
>gi|146298486|ref|YP_001193077.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
gi|146152904|gb|ABQ03758.1| BatE-like protein [Flavobacterium johnsoniae UW101]
Length = 248
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEK-----KPLPRFVTIKASRANSRIGP 71
Y ++ I+ +A++ +L IL + +P F + R P
Sbjct: 146 YFSQLTLTKRIYFIAMFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSE----VRSEP 201
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + L +G V V++ W++I DG GWI+ + +
Sbjct: 202 QKAGSAI-ILLHEGAKVYVMETVGKWKKIELTDGQEGWIDATTI 244
>gi|13470441|ref|NP_102009.1| hypothetical protein mll0148 [Mesorhizobium loti MAFF303099]
gi|14021182|dbj|BAB47795.1| mll0148 [Mesorhizobium loti MAFF303099]
Length = 105
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ + +P+ S ++ ++ G + I + G W + GW
Sbjct: 50 FLAVRTRPNSSSRMIGQLFNGDHVEIFDRRGNWYQVEIGGSTGWA 94
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 3/99 (3%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF-VTIKASRANSRIGPGIMYT 76
L +++ T+A ++ A ++ E R+ + + R P
Sbjct: 3 FRAFLPAAMLVTVAGFWLGASTPGVAQYCEGTVHGLSGRYNLATGSGFLAVRTRPNSSSR 62
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ L G VE+ NW Q+ G+ GW N L
Sbjct: 63 MIGQ-LFNGDHVEIFDRRGNWYQVE-IGGSTGWANARWL 99
>gi|16273495|ref|NP_439747.1| hypothetical protein HI1605 [Haemophilus influenzae Rd KW20]
gi|1176108|sp|P44272|Y1605_HAEIN RecName: Full=Uncharacterized protein HI_1605; Flags: Precursor
gi|1574447|gb|AAC23249.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 203
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V+ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLDRQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|20386522|gb|AAM21695.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386524|gb|AAM21696.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386526|gb|AAM21697.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 76 SVSATWLNVRTGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 134
Query: 118 K 118
K
Sbjct: 135 K 135
>gi|326202805|ref|ZP_08192672.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325986882|gb|EGD47711.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 306
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
V+V+ + +W +I DGT GW+ +S S + +Y +
Sbjct: 73 VKVISQESSWAKIMMLDGTTGWVKSKYISRDTSCVTDGRINNKIVVTAKTVYVYTGTLND 132
Query: 148 IVAK-VEPG-VLLTIRECSGEWCFGYNLDTEGWIK 180
I K V G L +I + + + +GW++
Sbjct: 133 IKYKQVVLGTELYSINKTKTGYDVLLPDNKKGWVE 167
>gi|229150859|ref|ZP_04279071.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
gi|228632648|gb|EEK89265.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
Length = 359
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY----ENWRQI 100
EK P I + N R GPG Y+V+ L +G +V E NW +
Sbjct: 204 EKPTVTVTPSNGVAYIDGTNVNLRKGPGTNYSVI-RKLKQGEAYKVFAESNGPNGNWLNL 262
Query: 101 RDFDGTIGWINK 112
G W+
Sbjct: 263 ----GGEQWVKY 270
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 118 KRSAIVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPG----VLLTIRECSGEWCFGYN 172
K + V+P N + +NL K P ++ K++ G V +G W
Sbjct: 205 KPTVTVTPSNGVAYIDGTNVNLRKGPGTNYSVIRKLKQGEAYKVFAESNGPNGNWLNL-- 262
Query: 173 LDTEGWIK 180
E W+K
Sbjct: 263 -GGEQWVK 269
>gi|301166216|emb|CBW25791.1| putative lipoprotein [Bacteriovorax marinus SJ]
Length = 152
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+I I+ + LA+ E + TIK N R G ++ + + L K
Sbjct: 1 MIMKKLIFALILGFLAIQFETQAAC--------TIKYKS-NLR-GDATTHSSIVSALPKY 50
Query: 86 LPVEVVKEYENWRQIRDFDGT--IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
P+ ++++ +W +++ G GW+ SLL + P +K+
Sbjct: 51 TPLIILEKNGDWFKVK---GMKFEGWLFHSLLDENLECMSVKDTANAFCPTKNEQHKRA 106
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 22/64 (34%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
AI NL S IV+ + L I E +G+W + EGW+
Sbjct: 16 AIQFETQAACTIKYKSNLRGDATTHSSIVSALPKYTPLIILEKNGDWFKVKGMKFEGWLF 75
Query: 181 KQKI 184
+
Sbjct: 76 HSLL 79
>gi|260771905|ref|ZP_05880823.1| arylsulfatase [Vibrio metschnikovii CIP 69.14]
gi|260613197|gb|EEX38398.1| arylsulfatase [Vibrio metschnikovii CIP 69.14]
Length = 202
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 19/133 (14%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ F L AL+ ++ + +K GP + ++ + + G
Sbjct: 4 LICMVLFSLLAAPALAQDRYVADKLFT-----------YMHSGPSNQFRIIGS-IDAGEK 51
Query: 88 VEVVK--EYENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYKK 141
V+++ + + QI D G GWI ++ + S V K N +
Sbjct: 52 VKLLNTNKETGYSQIVDERGRNGWIESRFVTREVSMAVRLPLLEKELKEVKNQLANARQN 111
Query: 142 PD-IQSIIVAKVE 153
D ++ +V +E
Sbjct: 112 ADSEKAGLVDSLE 124
>gi|224498949|ref|ZP_03667298.1| hypothetical protein LmonF1_04298 [Listeria monocytogenes Finland
1988]
Length = 367
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKTIGWVNSDAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW +
Sbjct: 309 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSRAD 353
>gi|163781941|ref|ZP_02176941.1| General secretion pathway protein, ATPase [Hydrogenivirga sp.
128-5-R1-1]
gi|159883161|gb|EDP76665.1| General secretion pathway protein, ATPase [Hydrogenivirga sp.
128-5-R1-1]
Length = 397
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD----TEG 177
+ R + +N+ + PD S +V + G L + E E W D EG
Sbjct: 330 IKAGERVVVSVPMLNMREAPDPNSSVVYILREGDELRVLEEGPETWVKVLFSDGDVEVEG 389
Query: 178 WI 179
W+
Sbjct: 390 WV 391
>gi|304396859|ref|ZP_07378739.1| SH3 domain protein [Pantoea sp. aB]
gi|308188138|ref|YP_003932269.1| hypothetical protein Pvag_2660 [Pantoea vagans C9-1]
gi|304355655|gb|EFM20022.1| SH3 domain protein [Pantoea sp. aB]
gi|308058648|gb|ADO10820.1| Uncharacterized protein ygiM precursor [Pantoea vagans C9-1]
Length = 206
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 56 RFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWIN 111
R+V+ + R GPG + ++ L G V++++ ++ QIRD +G WI
Sbjct: 26 RYVS---DELSTWVRSGPGDQFRLLGK-LNAGEEVQLLQTNNDTHYGQIRDSEGRTTWIP 81
Query: 112 KSLLSGKRS 120
S LS S
Sbjct: 82 LSQLSANPS 90
>gi|168204370|ref|ZP_02630375.1| probable enterotoxin [Clostridium perfringens E str. JGS1987]
gi|170663919|gb|EDT16602.1| probable enterotoxin [Clostridium perfringens E str. JGS1987]
Length = 914
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +NL K+P I + I+ ++ + I G W +G++
Sbjct: 121 TKVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVY 171
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 15/103 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN------ 111
VT ++ N R P I ++ L V ++ + +W +I +G G++
Sbjct: 120 VTKVSTVLNLRKEPRIGAEIINRLLN-NTKVNILGKQGSWYKIEL-NGQKGYVYGMFLNE 177
Query: 112 -------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+S K+S++ ++ + + +K ++
Sbjct: 178 GTMKENSSKTISNKKSSVKKEAKKEVVSGAKAKVAQKQREEAK 220
>gi|152978748|ref|YP_001344377.1| SH3 type 3 domain-containing protein [Actinobacillus succinogenes
130Z]
gi|150840471|gb|ABR74442.1| SH3 type 3 domain protein [Actinobacillus succinogenes 130Z]
Length = 203
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + G V V+ E + IRD WI S L+ S+
Sbjct: 36 LRKGAGDNFKIAGA-IQAGEQVTVLNRQEKYSLIRDSRNREAWILNSELTSSPSS 89
>gi|320119743|gb|ADW15970.1| invasion associated protein [Listeria monocytogenes]
Length = 210
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 66 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 124
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 125 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 156
>gi|315305366|ref|ZP_07875250.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
gi|313626269|gb|EFR95518.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
Length = 508
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 36/149 (24%)
Query: 68 RIGPGIMYTVVCT----------------YLTKGLPV--EVVKEYENWRQIRDFDGTIGW 109
++ P ++ T Y L V E + +W IR+ + IGW
Sbjct: 200 KVAPNKTQEIIWTTPYNTAKSEKIDTLANYENHNLEVSWEAKTKKGHWYFIRENNKDIGW 259
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYIN--LYKKPDIQSIIVAKVEPGVLLTIRECSGE- 166
IN + L+ T +N +Y+ P + + + G + + +
Sbjct: 260 INSNALTLSYHQQEEENVNLTKYVDDLNGHIYRLPSPE----KQFDKGTIASYDRKALHA 315
Query: 167 ----------WCFGYNLDTE-GWIKKQKI 184
W +TE GW++ K+
Sbjct: 316 NKKITRDGYAWLKLSVGNTEIGWVRADKL 344
>gi|309790526|ref|ZP_07685084.1| cell wall hydrolase/autolysin [Oscillochloris trichoides DG6]
gi|308227442|gb|EFO81112.1| cell wall hydrolase/autolysin [Oscillochloris trichoides DG6]
Length = 348
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+G + ++ + + + + + P+ ++ + +EPG + +
Sbjct: 249 AEGILTYLAQRDPHDSAALLPPELPNLRVSADGAVMRVAPNDEARRITNLEPGQRIFALD 308
Query: 163 CSGEWCFGYNLDT---EGWIKKQKI 184
W + D GW++ ++
Sbjct: 309 QRDGWYQIFARDYPSAPGWVRADQV 333
>gi|251788434|ref|YP_003003155.1| putative signal transduction protein [Dickeya zeae Ech1591]
gi|247537055|gb|ACT05676.1| SH3 domain protein [Dickeya zeae Ech1591]
Length = 207
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 13/127 (10%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++ F + I A + + EK + + +R GPG Y ++ T
Sbjct: 1 MMNKLSFFLVTILGLSAALSLHAEEKRYISDELVTY----------ARSGPGNQYRIIGT 50
Query: 81 YLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G V ++ + + QIRD WI LS S + +
Sbjct: 51 -LNAGEAVTLISVNDSAGYAQIRDDKDRSSWIPLDQLSPTPSLKTRVPELENQVKTLTDK 109
Query: 139 YKKPDIQ 145
D +
Sbjct: 110 LNGVDQE 116
>gi|212695990|ref|ZP_03304118.1| hypothetical protein ANHYDRO_00523 [Anaerococcus hydrogenalis DSM
7454]
gi|212677113|gb|EEB36720.1| hypothetical protein ANHYDRO_00523 [Anaerococcus hydrogenalis DSM
7454]
Length = 131
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLL 115
S N R GP + + + V+++ E E+ W +I ++G G++ LL
Sbjct: 71 TKSTINLRRGPSTNEDNIISSIPGNSQVKLLSEEEDENGEMWSRI-FYEGQEGYVRSDLL 129
>gi|119898070|ref|YP_933283.1| N-acetylmuramoyl-L-alanine amidase [Azoarcus sp. BH72]
gi|119670483|emb|CAL94396.1| N-acetylmuramoyl-L-alanine amidase [Azoarcus sp. BH72]
Length = 286
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR- 101
S + V + R N R G G Y V LTK + V++ W +
Sbjct: 203 SRAVGRDSDIEMVEAVYVAVPRLNIREGAGTGYRPVREPLTKHTRLVVIQRSGGWINVEV 262
Query: 102 DFDGT-IGWINKSLLSGKR 119
D G GW+
Sbjct: 263 DGPGQVKGWVWGEYTRSSP 281
>gi|301052548|ref|YP_003790759.1| N-acetylmuramoyl-L-alanine amidase family 3 protein [Bacillus
anthracis CI]
gi|300374717|gb|ADK03621.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus cereus
biovar anthracis str. CI]
Length = 529
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|300119279|ref|ZP_07056973.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus SJ1]
gi|298723387|gb|EFI64135.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus SJ1]
Length = 529
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+K S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETIHEGFTTYEKASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|47224228|emb|CAG09074.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1834
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 142 PDIQSIIVA--KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + A + G +++ + +WC G T+GW K ++
Sbjct: 934 PSTAEAVTALLSLSQGDTVSVLQQREDWCLGQLNGTQGWFPKDRV 978
>gi|291561753|emb|CBL40552.1| Bacterial SH3 domain [butyrate-producing bacterium SS3/4]
Length = 269
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ +N+ K+P + + K++PG + +R+ W E ++ K+
Sbjct: 205 TASGSSYKTTTTLNVRKEPSTDADRIGKLDPGASVEYLRDHDDTWAVIKYNGQEAYVAKE 264
Query: 183 KI 184
+
Sbjct: 265 FL 266
>gi|290474852|ref|YP_003467732.1| hypothetical protein XBJ1_1826 [Xenorhabdus bovienii SS-2004]
gi|289174165|emb|CBJ80952.1| putative membrane protein [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKS 113
R+V+ A R GP + ++ + L G V ++ + Q++D G I WI +
Sbjct: 26 RYVS-DELSAYIRSGPSNQHRIMGS-LNSGEEVILLSSNSENGYSQVKDSKGRISWILTN 83
Query: 114 LLSGKRS 120
LS S
Sbjct: 84 ELSTIPS 90
>gi|229114522|ref|ZP_04243938.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-3]
gi|228668976|gb|EEL24402.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-3]
Length = 588
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
I + N R G G+ Y VV KG +V+ + W +I+ + W+
Sbjct: 317 ITGTSVNVRSGAGVNYGVV-RIAKKGEKYKVLSIKDGWYEIKKGE----WVKY 364
>gi|229180796|ref|ZP_04308133.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
gi|229191806|ref|ZP_04318780.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
gi|228591680|gb|EEK49525.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
gi|228602633|gb|EEK60117.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
Length = 269
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R GP +V+ L KG +V + NW + G WI
Sbjct: 141 VNLRSGPSTENSVI-RKLQKGEAYKVWGKLGNWLYL----GDNQWIYY 183
>gi|20386508|gb|AAM21688.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386510|gb|AAM21689.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 219
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I DG G++N L+
Sbjct: 75 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTD 133
Query: 118 K-RSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 134 KVASTPVAPTQEVKKETTIQQAAPAAETKTEV 165
>gi|328947152|ref|YP_004364489.1| SH3 type 3 domain protein [Treponema succinifaciens DSM 2489]
gi|328447476|gb|AEB13192.1| SH3 type 3 domain protein [Treponema succinifaciens DSM 2489]
Length = 460
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
P+ + ++ G +++I +G W + + DT GW+ + ++
Sbjct: 414 PEKTAPTGVTIQAGSVVSIIRTAGGWMYIRHNDTYGWVSAENVY 457
>gi|299537272|ref|ZP_07050575.1| lytic transglycosylase, catalytic [Lysinibacillus fusiformis ZC1]
gi|298727513|gb|EFI68085.1| lytic transglycosylase, catalytic [Lysinibacillus fusiformis ZC1]
Length = 499
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 13/70 (18%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-----------NWRQIRDFDGT 106
V+ + R P + T L KG V + +E W ++ DGT
Sbjct: 242 VSATTN-VTVRTRPTTDSPSMGT-LRKGEIVTITGHFEYEAVSTKKNHFVWYPVKRNDGT 299
Query: 107 IGWINKSLLS 116
G++ S L+
Sbjct: 300 EGYVASSYLN 309
>gi|29378435|gb|AAO83919.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 37.3 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R G G+ +++ T + G V V E W +I G G++N L+
Sbjct: 56 SVSATWLNVRSGAGVDNSII-TSIKGGTKVTVETTESNGWHKITYNXGKTGFVNGKYLTD 114
Query: 118 KR-SAIVSPWNRKTNNPIYINLYKKPDIQSII 148
K S V+P + ++ +
Sbjct: 115 KAVSTPVAPTQEVKKETTTQQAAPAAETKTEV 146
>gi|313622766|gb|EFR93105.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL J1-023]
Length = 367
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 19/105 (18%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT------NNPIYINLYKKP 142
+ V E W Q++D +IGWIN + + + +P N K +Y P
Sbjct: 249 KAVTEKGTWYQLQDQGKSIGWINSNAV----TIFYTPQNEKNMKLDKYVTDSDQKIYAYP 304
Query: 143 -DIQSIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GW 178
+ S +V + G + I + W + D + GW
Sbjct: 305 VEDNSKVVVDLNDYLGQEVDIDRRADVKNEYWYRIKSDDGKIIGW 349
>gi|308069336|ref|YP_003870941.1| hypothetical protein PPE_02575 [Paenibacillus polymyxa E681]
gi|305858615|gb|ADM70403.1| Hypothetical protein PPE_02575 [Paenibacillus polymyxa E681]
Length = 201
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K L SL F++A+ ++ + + ++P +K N R GPG Y V
Sbjct: 1 MLKSLVRSLSFSIALIIFVVLLQTPAITNAELAREPKTSVYDVKIGGLNVRTGPGFAYPV 60
Query: 78 V 78
+
Sbjct: 61 I 61
>gi|228913577|ref|ZP_04077205.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229120527|ref|ZP_04249773.1| Uncharacterized cell wall amidase [Bacillus cereus 95/8201]
gi|228662943|gb|EEL18537.1| Uncharacterized cell wall amidase [Bacillus cereus 95/8201]
gi|228845988|gb|EEM91011.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 529
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|196035078|ref|ZP_03102484.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
W]
gi|218902104|ref|YP_002449938.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH820]
gi|195992142|gb|EDX56104.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
W]
gi|218536759|gb|ACK89157.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH820]
Length = 529
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|228926065|ref|ZP_04089144.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228944632|ref|ZP_04107002.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228815092|gb|EEM61343.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228833603|gb|EEM79161.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 529
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|261367663|ref|ZP_05980546.1| bacterial SH3 domain protein [Subdoligranulum variabile DSM 15176]
gi|282570455|gb|EFB75990.1| bacterial SH3 domain protein [Subdoligranulum variabile DSM 15176]
Length = 172
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 115 LSGKRSAIVSPWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCF 169
LS + + + + + +NL P VA++ G +T + + W
Sbjct: 95 LSEQPTTVYAEGEQPAFTVTPDSNMNLRAGPGTDFDKVAQIPAGTAVTALGTNADETWVV 154
Query: 170 GYNLDTEGWIKKQKI 184
GW+ K+ +
Sbjct: 155 VQYEGQYGWLAKEYL 169
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQ 99
++ + P F S N R GPG + V + G V + E W
Sbjct: 96 SEQPTTVYAEGEQPAFTVTPDSNMNLRAGPGTDFDKV-AQIPAGTAVTALGTNADETWV- 153
Query: 100 IRDFDGTIGWINKSLLSG 117
+ ++G GW+ K L+
Sbjct: 154 VVQYEGQYGWLAKEYLNA 171
>gi|163757203|ref|ZP_02164303.1| lipoprotein; possible cell wall-associated hydrolase [Kordia
algicida OT-1]
gi|161322832|gb|EDP94181.1| lipoprotein; possible cell wall-associated hydrolase [Kordia
algicida OT-1]
Length = 248
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQK 183
+ L +P S +V++V G + E +W EGWI ++
Sbjct: 11 VPLRAEPSDMSELVSQVLYGEHFKVLEQRKKWSRIRIAFDKYEGWIDNKQ 60
>gi|329963585|ref|ZP_08301064.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328528574|gb|EGF55545.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 277
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + + F + + S +K + + + R P L
Sbjct: 185 TGFIAGIVFLIFVVLSNVFASQQKSELTNRNS---AIVLSPSVTVRSTPS-ESGTSLFIL 240
Query: 83 TKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
+G VE+ W++IR DG +GW+ + +
Sbjct: 241 HEGHKVEIKDNSMREWKEIRLEDGKVGWVPSATI 274
>gi|187779286|ref|ZP_02995759.1| hypothetical protein CLOSPO_02882 [Clostridium sporogenes ATCC
15579]
gi|187772911|gb|EDU36713.1| hypothetical protein CLOSPO_02882 [Clostridium sporogenes ATCC
15579]
Length = 396
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 83 TKGLPVEVV-KEYENWRQIRDFDGTIGWINKSLLSGKRSA--IVSPWNRKTNNPIYINLY 139
KG ++V+ W +++ DG GW+N + S S I S L
Sbjct: 114 KKGQIIQVINGSVTGWWKVKTPDGYYGWVNSANTSRNSSGKLIASSNVSAYFTADIAPLQ 173
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + V+PG + + W D GWI
Sbjct: 174 Q--------IKVVQPGEQIKAIDSRTGWWMIAENDRLGWI 205
>gi|290891776|ref|ZP_06554773.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
gi|290558370|gb|EFD91887.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
Length = 508
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 20/120 (16%)
Query: 81 YLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI--VSPWNRKTNNPIYI 136
Y + L + E E W IR+ + IGW+N S L+ + K + +
Sbjct: 229 YTGRNLEISWEAKTEKGLWYFIRENNEDIGWVNSSALNISYHQKEDENVQLTKYVDDLNA 288
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----------WCFGYNLDTE-GWIKKQKI 184
++Y+ P+ + + + G + + + W GW++ K+
Sbjct: 289 HIYRLPNPE----KQFDNGTIAKYDRKALQADKKITRGGYAWFRLSEGGETIGWVRADKL 344
>gi|229151893|ref|ZP_04280091.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
gi|228631598|gb|EEK88229.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
Length = 338
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLL--SGKRS 120
N R GP +V+ L KG +V + NW + G W+ S + +G
Sbjct: 209 VNLRSGPSADNSVI-RKLQKGEAYKVWGKLGNWLNL----GGNQWVYYDSSYIRYNGTDV 263
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ + R + + Y+ P Q VA
Sbjct: 264 STIITGKRVISKVDNLRFYESPSWQDKDVA 293
>gi|255533086|ref|YP_003093458.1| NLP/P60 protein [Pedobacter heparinus DSM 2366]
gi|255346070|gb|ACU05396.1| NLP/P60 protein [Pedobacter heparinus DSM 2366]
Length = 260
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
L +P ++ I +++ G + I E + +W F N EGW+ +++
Sbjct: 13 AALRAEPSDKAEIASQLLFGDQVEILEQTDKWLFIRNAYDGYEGWVDFKQL 63
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLS 116
R P + L G VE++++ + W IR+ +DG GW++ L
Sbjct: 15 LRAEPSDKAEIASQLLF-GDQVEILEQTDKWLFIRNAYDGYEGWVDFKQLG 64
>gi|119775807|ref|YP_928547.1| SH3 domain-containing protein [Shewanella amazonensis SB2B]
gi|119768307|gb|ABM00878.1| SH3 domain protein [Shewanella amazonensis SB2B]
Length = 200
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
F + + LPR+++ GPG + ++ + + G V
Sbjct: 1 MFRPLFLAGALLLSPALLAENLPRYIS-DDIYIYLHNGPGNEFRILGS-INAGTQVSFTG 58
Query: 93 EY-ENWRQIRDFDGTIGWINKSLLSGKRS 120
+ ++ +I D G GW+ LS +S
Sbjct: 59 KTSGDFSEIVDHRGREGWVRTDALSSGKS 87
>gi|329124005|ref|ZP_08252552.1| hypothetical protein HMPREF9095_1770 [Haemophilus aegyptius ATCC
11116]
gi|327467430|gb|EGF12928.1| hypothetical protein HMPREF9095_1770 [Haemophilus aegyptius ATCC
11116]
Length = 203
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|317152976|ref|YP_004121024.1| SH3 type 3 domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943227|gb|ADU62278.1| SH3 type 3 domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 472
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 11/120 (9%)
Query: 66 NSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTI-------GWINKSLLSG 117
N R L G V + + W + + T G+ N L
Sbjct: 36 NLRS--ARSAQSQWVGSLHPGQKVRISFMKDGWVAVFEPGETRADEAFAVGYSNVKFLLP 93
Query: 118 KRS-AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K + W P +N+ + S +V +E + + G+W ++ D
Sbjct: 94 KPTRVEPETWGELMVTPRTLNIRDGASVGSRLVGNLEAMERVKVDFPEGDWIMVFHPDAT 153
>gi|145641756|ref|ZP_01797332.1| hypothetical protein CGSHiR3021_02354 [Haemophilus influenzae
R3021]
gi|145273570|gb|EDK13440.1| hypothetical protein CGSHiR3021_02354 [Haemophilus influenzae
22.4-21]
Length = 203
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|330448766|ref|ZP_08312413.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492957|dbj|GAA06910.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 205
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 14/99 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + L I +AP+ + I + GPG Y ++ +
Sbjct: 1 MKYLISLCLLICAAVAPVANAEQVRYISDNLFT-----------YMHSGPGTQYRIIGS- 48
Query: 82 LTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLSGK 118
+ G V ++ + + QI D G GW++ +S +
Sbjct: 49 VDAGTKVTLLSSNKAAGFTQITDDRGRSGWVDSKFVSNE 87
>gi|251798374|ref|YP_003013105.1| SpoIID/LytB domain protein [Paenibacillus sp. JDR-2]
gi|247546000|gb|ACT03019.1| SpoIID/LytB domain protein [Paenibacillus sp. JDR-2]
Length = 701
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII--VAKVE 153
NW ++ + G+I + LL+ + T N + K P ++ + V +V
Sbjct: 450 NWYRVVLPNNQTGYIREDLLTDSGQTNAAGVKLMTVNTDASKVRKNPKVEDTVALVGQVN 509
Query: 154 PGVLLTIRE 162
G ++ + +
Sbjct: 510 KGTVVAVLD 518
>gi|257125057|ref|YP_003163171.1| SH3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257048996|gb|ACV38180.1| SH3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 230
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLL 115
P + KG V+ Y +W I D+ + G+I+KS +
Sbjct: 182 PETDAPI-WGKAEKGQEFMVINRYGDWYYIIYDYPASTGYIHKSQV 226
>gi|145637481|ref|ZP_01793139.1| hypothetical protein CGSHiHH_03932 [Haemophilus influenzae PittHH]
gi|145269287|gb|EDK09232.1| hypothetical protein CGSHiHH_03932 [Haemophilus influenzae PittHH]
Length = 203
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|30261032|ref|NP_843409.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Ames]
gi|47526184|ref|YP_017533.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183875|ref|YP_027127.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Sterne]
gi|165871934|ref|ZP_02216576.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0488]
gi|167635887|ref|ZP_02394195.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0442]
gi|167638916|ref|ZP_02397190.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0193]
gi|170687580|ref|ZP_02878796.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0465]
gi|170708255|ref|ZP_02898700.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0389]
gi|177653886|ref|ZP_02935958.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0174]
gi|190566638|ref|ZP_03019555.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis Tsiankovskii-I]
gi|227816237|ref|YP_002816246.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CDC 684]
gi|229603159|ref|YP_002865468.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0248]
gi|254682909|ref|ZP_05146770.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CNEVA-9066]
gi|254725695|ref|ZP_05187477.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A1055]
gi|254734322|ref|ZP_05192035.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Western North America USA6153]
gi|254740030|ref|ZP_05197722.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Kruger B]
gi|254753369|ref|ZP_05205405.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Vollum]
gi|254758468|ref|ZP_05210495.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Australia 94]
gi|30254646|gb|AAP24895.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus anthracis
str. Ames]
gi|47501332|gb|AAT30008.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. 'Ames Ancestor']
gi|49177802|gb|AAT53178.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus anthracis
str. Sterne]
gi|164712365|gb|EDR17900.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0488]
gi|167513046|gb|EDR88418.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0193]
gi|167528704|gb|EDR91463.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0442]
gi|170126776|gb|EDS95658.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0389]
gi|170668393|gb|EDT19140.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0465]
gi|172081114|gb|EDT66191.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0174]
gi|190562190|gb|EDV16158.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis Tsiankovskii-I]
gi|227005284|gb|ACP15027.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CDC 684]
gi|229267567|gb|ACQ49204.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0248]
Length = 529
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEEFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|323435905|ref|ZP_01048924.2| NlpC/P60 family protein [Dokdonia donghaensis MED134]
gi|321496220|gb|EAQ40158.2| NlpC/P60 family protein [Dokdonia donghaensis MED134]
Length = 249
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQK 183
+ + +P S +V +V G + E +W + EGWI ++
Sbjct: 11 VPMRAEPSDPSELVNQVLYGEHFKVVEQRKKWSRIKLSHDKYEGWIDNKQ 60
>gi|319897273|ref|YP_004135468.1| hypothetical protein HIBPF10060 [Haemophilus influenzae F3031]
gi|317432777|emb|CBY81142.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 203
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|196037265|ref|ZP_03104576.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196031507|gb|EDX70103.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 349
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SL 114
I N R GP +V+ L KG +V + NW + G WI
Sbjct: 216 IDGQNVNLRSGPSTSNSVI-RKLQKGESYKVWGKLGNWLNL----GGNQWIYYDSSYIRY 270
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKP 142
SG+ +++V R + +N Y +P
Sbjct: 271 NSGQDASVV--GKRVESKVNSLNYYDRP 296
>gi|284802650|ref|YP_003414515.1| hypothetical protein LM5578_2406 [Listeria monocytogenes 08-5578]
gi|284995792|ref|YP_003417560.1| hypothetical protein LM5923_2357 [Listeria monocytogenes 08-5923]
gi|284058212|gb|ADB69153.1| hypothetical protein LM5578_2406 [Listeria monocytogenes 08-5578]
gi|284061259|gb|ADB72198.1| hypothetical protein LM5923_2357 [Listeria monocytogenes 08-5923]
Length = 375
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + K +Y P +
Sbjct: 257 KAVTEKGTWYQLQDQGKTIGWVNSDAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 316
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 317 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 361
>gi|194678792|ref|XP_601330.4| PREDICTED: SH3 multiple domains 1 [Bos taurus]
Length = 699
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 165 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 223
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 224 VQPYASQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 270
>gi|293596607|ref|ZP_05262776.2| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|293590758|gb|EFF99092.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 381
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + K +Y P +
Sbjct: 263 KAVTEKGTWYQLQDQGKTIGWVNSDAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 322
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 323 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 367
>gi|254826908|ref|ZP_05231595.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|254831360|ref|ZP_05236015.1| hypothetical protein Lmon1_08377 [Listeria monocytogenes 10403S]
gi|254899095|ref|ZP_05259019.1| hypothetical protein LmonJ_04764 [Listeria monocytogenes J0161]
gi|254937091|ref|ZP_05268788.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|255025639|ref|ZP_05297625.1| hypothetical protein LmonocytFSL_03585 [Listeria monocytogenes FSL
J2-003]
gi|258599288|gb|EEW12613.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|258609693|gb|EEW22301.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
Length = 367
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + K +Y P +
Sbjct: 249 KAVTEKGTWYQLQDQGKTIGWVNSDAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 308
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 309 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 353
>gi|311271801|ref|XP_001926932.2| PREDICTED: SH3 and PX domain-containing protein 2A [Sus scrofa]
Length = 1020
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 102 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 160
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 161 VQPYASQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 207
>gi|237795077|ref|YP_002862629.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
gi|229263358|gb|ACQ54391.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
Length = 250
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N P +N+ +K S I+ + G + + G+W Y G++ + +
Sbjct: 195 NTPSGVNIREKKSTSSKILGALPNGSKVQLYRKEGDWIHIYYPPHGGYVYGKYV 248
>gi|30021791|ref|NP_833422.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|29897347|gb|AAP10623.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
Length = 351
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+IV +NL P ++ ++ K++ G + + G+W
Sbjct: 208 SIVEANGVGNIEGYNVNLRSGPSAKNKVIRKLQKGETYKVGKKVGDW 254
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 41 ALSHEKEIFEKKPLPRFVT------IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+++ + + E LP V I+ N R GP V+ L KG +V K+
Sbjct: 193 SVAVDAKPQESNDLPSIVEANGVGNIEGYNVNLRSGPSAKNKVI-RKLQKGETYKVGKKV 251
Query: 95 ENWRQIRDFDGTIGWINK 112
+W I G+ WI
Sbjct: 252 GDWLDI----GSNQWIYY 265
>gi|160878882|ref|YP_001557850.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160427548|gb|ABX41111.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 419
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N Y+N+ S IV K+ G + + W + EG+I + +Y
Sbjct: 88 SNTEDYVNIRSSWSTDSDIVGKLYRGAMAQVLVKGQIWTKIKSGSVEGYILNDYL--VY- 144
Query: 190 GE 191
E
Sbjct: 145 DE 146
>gi|84502959|ref|ZP_01001061.1| hypothetical protein OB2597_04023 [Oceanicola batsensis HTCC2597]
gi|84388704|gb|EAQ01575.1| hypothetical protein OB2597_04023 [Oceanicola batsensis HTCC2597]
Length = 216
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL PD + I+ + ++++++C G WC T GW +
Sbjct: 24 DATATTDLNLRDLPDPRGEILDVIPGEAMVSVQQCVEGGAWCKVDYDGTVGWAYSPYL 81
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLP-VEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ N R P ++ + + V+ E W ++ D+DGT+GW L+
Sbjct: 27 ATTDLNLRDLPDPRGEILDVIPGEAMVSVQQCVEGGAWCKV-DYDGTVGWAYSPYLTASL 85
Query: 119 ---RSAIVSPWNRKTNNPIYIN 137
+ + +NR + +N
Sbjct: 86 ESEPTVVYQNFNRLDVETVDVN 107
>gi|260425318|ref|ZP_05779298.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
gi|260423258|gb|EEX16508.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
Length = 303
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 11/89 (12%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
GT S ++G AIVS +N+ P + + ++ G +
Sbjct: 145 PGGTEITAAGSSVAGGDMAIVSGLQAGD----LLNVRAGPGTGNRVTGQLADGDNVRRVG 200
Query: 163 CS----GEWCFGYNLD---TEGWIKKQKI 184
C EWC + GW+ + +
Sbjct: 201 CQMVGSTEWCEIEMMTDMRERGWVAARYL 229
>gi|68249805|ref|YP_248917.1| hypothetical protein NTHI1437 [Haemophilus influenzae 86-028NP]
gi|145633005|ref|ZP_01788737.1| hypothetical protein CGSHi3655_05569 [Haemophilus influenzae 3655]
gi|145635113|ref|ZP_01790819.1| hypothetical protein CGSHiAA_03138 [Haemophilus influenzae PittAA]
gi|148826130|ref|YP_001290883.1| hypothetical protein CGSHiEE_05675 [Haemophilus influenzae PittEE]
gi|229844785|ref|ZP_04464923.1| hypothetical protein CGSHi6P18H1_01081 [Haemophilus influenzae
6P18H1]
gi|229846290|ref|ZP_04466402.1| hypothetical protein CGSHi7P49H1_05583 [Haemophilus influenzae
7P49H1]
gi|68058004|gb|AAX88257.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144986231|gb|EDJ92810.1| hypothetical protein CGSHi3655_05569 [Haemophilus influenzae 3655]
gi|145267721|gb|EDK07719.1| hypothetical protein CGSHiAA_03138 [Haemophilus influenzae PittAA]
gi|148716290|gb|ABQ98500.1| hypothetical protein CGSHiEE_05675 [Haemophilus influenzae PittEE]
gi|229811294|gb|EEP47011.1| hypothetical protein CGSHi7P49H1_05583 [Haemophilus influenzae
7P49H1]
gi|229812166|gb|EEP47857.1| hypothetical protein CGSHi6P18H1_01081 [Haemophilus influenzae
6P18H1]
Length = 203
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNREAWILNSDLSSTPSS 89
>gi|168204814|ref|ZP_02630819.1| endolysin [Clostridium perfringens E str. JGS1987]
gi|170663528|gb|EDT16211.1| endolysin [Clostridium perfringens E str. JGS1987]
Length = 419
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 93 EYENWRQIR----DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
W +I D + + G++ G+++ N + + K P
Sbjct: 320 RTNGWLRITFYRADGNPSDGYVRYE---GEQTERFYKKGEVVNVRTSLTVRKGPGTNYSN 376
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +EP + I E GEW +G
Sbjct: 377 IGSLEPNENVDILEMIGEWYHVEYNTNKG 405
>gi|260494356|ref|ZP_05814487.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260198502|gb|EEW96018.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 400
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 57 FVTIKASRANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS 113
++ IKA +N R P + TY +K +E V+ N W D +GT G+I S
Sbjct: 68 YIFIKARVSNLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAAS 127
Query: 114 LLSGK 118
+
Sbjct: 128 QTEKR 132
>gi|256845715|ref|ZP_05551173.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294785039|ref|ZP_06750327.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|256719274|gb|EEU32829.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294486753|gb|EFG34115.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 400
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 57 FVTIKASRANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS 113
++ IKA +N R P + TY +K +E V+ N W D +GT G+I S
Sbjct: 68 YIFIKARVSNLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAAS 127
Query: 114 LLSGK 118
+
Sbjct: 128 QTEKR 132
>gi|256028140|ref|ZP_05441974.1| hypothetical protein PrD11_09126 [Fusobacterium sp. D11]
gi|289766077|ref|ZP_06525455.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289717632|gb|EFD81644.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 400
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 57 FVTIKASRANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS 113
++ IKA +N R P + TY +K +E V+ N W D +GT G+I S
Sbjct: 68 YIFIKARVSNLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAAS 127
Query: 114 LLSGK 118
+
Sbjct: 128 QTEKR 132
>gi|229195223|ref|ZP_04321997.1| Uncharacterized cell wall amidase [Bacillus cereus m1293]
gi|228588249|gb|EEK46293.1| Uncharacterized cell wall amidase [Bacillus cereus m1293]
Length = 529
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQMVVVKEQRADGWLKIVTSKGEK-W-------------TPLTEKTE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 265 TINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|90580761|ref|ZP_01236564.1| hypothetical protein VAS14_08060 [Vibrio angustum S14]
gi|90438029|gb|EAS63217.1| hypothetical protein VAS14_08060 [Vibrio angustum S14]
Length = 205
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 19/141 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + L I +API + + I + GPG Y ++ +
Sbjct: 1 MKYLISLCLLICAAIAPIANATQVRYISDNLFT-----------YMHSGPGTQYRIIGS- 48
Query: 82 LTKGLPVEVVK--EYENWRQIRDFDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPI 134
+ G + ++ + + Q+ D G GW++ +S +R + + +
Sbjct: 49 IDAGSKITLINTNKAAGFSQVTDDRGRSGWVDSKFVSTEIGLKERVPALQTELTEVKAKL 108
Query: 135 YINLYKKPDIQSIIVAKVEPG 155
L + + +
Sbjct: 109 AEALTSSDSQNAGLKNTLAQR 129
>gi|227500459|ref|ZP_03930521.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227217522|gb|EEI82841.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 139
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 6/110 (5%)
Query: 81 YLTKGLPVE-VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
Y K + VE V + E+ ++ + K+ + ++ A +K N+
Sbjct: 26 YQAKNIQVESVFDKKEDPKKAEKSNEDKKAEEKTEVKKQKPAKEENKKKKFRTRGTTNMR 85
Query: 140 KKPDIQSIIVAKVEPG-----VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+ + PG L + +W G+I+K +
Sbjct: 86 SEPNTVEDNILVAVPGGSEFEALEETKGEDADWIKLTFEGNTGFIRKDML 135
>gi|196046948|ref|ZP_03114168.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB108]
gi|196022177|gb|EDX60864.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB108]
Length = 529
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|324324938|gb|ADY20198.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 529
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQMVVVKEQRADGWLKIVTSKGEK-W-------------TPLTEKTE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 265 TINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|254295235|ref|YP_003061258.1| hypothetical protein Hbal_2890 [Hirschia baltica ATCC 49814]
gi|254043766|gb|ACT60561.1| hypothetical protein Hbal_2890 [Hirschia baltica ATCC 49814]
Length = 401
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 22/80 (27%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGE-------------------WC 168
K +N+ PD + I+ ++EP L I C+G+ WC
Sbjct: 316 KVRAGDMLNVRSAPDSTARILFQLEPDHKHLRIFRCTGDTALNEVLTSLENETIIQKTWC 375
Query: 169 FGYNLDT--EGWIKKQKIWG 186
+LD GW+ ++G
Sbjct: 376 EISDLDLVKRGWVNAYFLYG 395
>gi|229089957|ref|ZP_04221210.1| Uncharacterized cell wall amidase [Bacillus cereus Rock3-42]
gi|228693372|gb|EEL47080.1| Uncharacterized cell wall amidase [Bacillus cereus Rock3-42]
Length = 529
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|52426366|ref|YP_089503.1| hypothetical protein MS2311 [Mannheimia succiniciproducens MBEL55E]
gi|52308418|gb|AAU38918.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 205
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
++ L F+ +L LS + E ++VT + R G G + + + G
Sbjct: 2 IMQKLIKLFFSGILLTLSIQAAQAET----QYVTENLNT-YLRKGAGDNFKIAGA-IQAG 55
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
V V+ E + IRD WI + L+ S+
Sbjct: 56 EAVSVLDRKEKYSLIRDSKNREAWILTAELTDTPSS 91
>gi|332667478|ref|YP_004450266.1| NLP/P60 protein [Haliscomenobacter hydrossis DSM 1100]
gi|332336292|gb|AEE53393.1| NLP/P60 protein [Haliscomenobacter hydrossis DSM 1100]
Length = 281
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKIWGIYPGE 191
+ + P +S + +++ G + + E G +WC + GW++ +I I P E
Sbjct: 9 VPVRHTPSQRSEMSSQLLFGETVEVLEEKGKQWCKIRASCDNFIGWVESNQIKAITPSE 67
>gi|121720174|ref|XP_001276785.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119404997|gb|EAW15359.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 250
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
P++ALS I P I N R GPG Y VV +Y KG V +V +
Sbjct: 1 MLYLPLVALSFAASIPLVSAYP----ITGDGVNCRSGPGTSYKVVKSY-PKGHQVSIVCQ 55
Query: 94 YENWRQIRDFDGTIGW 109
D G W
Sbjct: 56 ATG----TDVKGDSLW 67
>gi|52144424|ref|YP_082404.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
gi|51977893|gb|AAU19443.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
Length = 529
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV ++ + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVTEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + T+ E SG W W+ K ++
Sbjct: 264 ETINEGFTTYETASHSSKVLGTYNAQTV-TVMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|300772545|ref|ZP_07082415.1| dipeptidyl peptidase VI [Sphingobacterium spiritivorum ATCC 33861]
gi|300760848|gb|EFK57674.1| dipeptidyl peptidase VI [Sphingobacterium spiritivorum ATCC 33861]
Length = 409
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 60/156 (38%), Gaps = 15/156 (9%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L P +++ + + AN R P + L G V+++
Sbjct: 90 VSVTLLPDASVADKPAGVVNLSV----------ANLRTKPEHSAEMASQVL-LGAQVDIL 138
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN---NPIYINLYKKPDIQSII 148
++ + ++R +G I W+ S + + ++ W + Y Y ++Q
Sbjct: 139 QKIKGDYRVRTAEGYIAWVPTSSVVAVTNEELNDWKKAKKIIFTDEYGKSYATANMQGQQ 198
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQK 183
V+ + G +L + SG + D + +++K++
Sbjct: 199 VSDLVYGDMLILNGESGNFYAVTYPDKRKAYVRKEQ 234
>gi|229030958|ref|ZP_04186974.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH1271]
gi|228730305|gb|EEL81269.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH1271]
Length = 591
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G GI + V + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINIRSGAGIEHPTV-RKASNGDRYKVLAVKNGWYKV----GNGEWIFYN 398
>gi|220933734|ref|YP_002512633.1| hypothetical protein Tgr7_0549 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995044|gb|ACL71646.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
GPG Y V L G ++ W ++R G GW++++ + +
Sbjct: 42 LHTGPGRGYPV-FHVLESGDKALILMRRTEWFKVRGESGVEGWVDRAQMERTLT 94
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 8/83 (9%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ +S ++ P+ + L+ P + +E G I
Sbjct: 7 VSAWTVSALLGLLLWLPGTLLAEPVRVQVVEPFLELHTGPGRGYPVFHVLESGDKALILM 66
Query: 163 CSGEWCFGYNL-DTEGWIKKQKI 184
EW EGW+ + ++
Sbjct: 67 RRTEWFKVRGESGVEGWVDRAQM 89
>gi|86130942|ref|ZP_01049541.1| hypothetical protein MED134_08481 [Dokdonia donghaensis MED134]
gi|85818353|gb|EAQ39513.1| hypothetical protein MED134_08481 [Dokdonia donghaensis MED134]
Length = 170
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 83 TKGLPVEVVKEYENWRQI--RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G +++ ++ ++ D D W+ K L + + +NLY
Sbjct: 63 EAGYILQITGVENDFFKVSFEDLDFKNVWVRKGTL---------GLVTRNYDNKNLNLYD 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFG----YNLDTEGWIK 180
KP++ S I + +E ++ + +W + GW++
Sbjct: 114 KPNLDSSISSVLEKEQIVRVLNVCNKWAYVETINEGKTKRGWLQ 157
>gi|13472275|ref|NP_103842.1| hypothetical protein mlr2516 [Mesorhizobium loti MAFF303099]
gi|14023020|dbj|BAB49628.1| mlr2516 [Mesorhizobium loti MAFF303099]
Length = 331
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLD--TEGWIKKQKI 184
+N+ KP A++ G + C+ WC + + GW + +
Sbjct: 58 DDLLNIRAKPSAMGKTEARLAAGASVRNLGCNDIDGHPWCKVESDNPKASGWAPARYL 115
>gi|163750908|ref|ZP_02158141.1| hypothetical protein KT99_09054 [Shewanella benthica KT99]
gi|161329332|gb|EDQ00329.1| hypothetical protein KT99_09054 [Shewanella benthica KT99]
Length = 191
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKS 113
P +++ GPG + ++ + + G + ++ E ++ +I D G GW+ +
Sbjct: 23 PGYIS-DNVYLYLHGGPGTQFRILGS-VEAGQAISLLGETQGDYTKIIDHKGREGWVEEK 80
Query: 114 LLSGKRSA 121
+++ ++S
Sbjct: 81 MVTRQKSF 88
>gi|84498288|ref|ZP_00997085.1| putative amidase [Janibacter sp. HTCC2649]
gi|84381788|gb|EAP97671.1| putative amidase [Janibacter sp. HTCC2649]
Length = 634
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 35/116 (30%), Gaps = 15/116 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC----------TYLTKGLPVEVVKEY 94
E +P P F T + + R P + G V+
Sbjct: 439 ATETQPGRPCPSFGT---NYVDVRTAPSDSAPLAWGSSDLVSDRDARAVAGHKFYVMGRQ 495
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+W ++ +DG+ WI + + + S + +Y + ++ A
Sbjct: 496 GDWLKVW-WDGSAAWIKSPK-GDQANVVPSQGEVVEPVRPSVPVYARAYPEASAYA 549
>gi|77361185|ref|YP_340760.1| hypothetical protein PSHAa2262 [Pseudoalteromonas haloplanktis
TAC125]
gi|76876096|emb|CAI87318.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 201
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L ++ + + + E + I R G Y ++ + + G
Sbjct: 5 CLLWLFLTASTFASQAEEAQTAAPTNAKTAYIIDNLYTFMRSGASKNYRLLGS-IDAGTQ 63
Query: 88 VEVVK-EYENWRQIRDFDGTIGWINKSLLSGK 118
+ ++ E + +++D GW+ ++
Sbjct: 64 LTLLSSEENGFLKVKDDKDREGWVEAKYITQT 95
>gi|53713706|ref|YP_099698.1| hypothetical protein BF2415 [Bacteroides fragilis YCH46]
gi|265764030|ref|ZP_06092598.1| BatE [Bacteroides sp. 2_1_16]
gi|52216571|dbj|BAD49164.1| conserved hypothetical protein BatE [Bacteroides fragilis YCH46]
gi|263256638|gb|EEZ27984.1| BatE [Bacteroides sp. 2_1_16]
Length = 278
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F I F + ++A + E+ I + R P L +G
Sbjct: 188 FIAGIIFLIVVVMANVFASKQKEELLNRDTAIIMSPSVTVRSTPSEN-GTSLFILHEGHK 246
Query: 88 VEVVKE-YENWRQIRDFDGTIGWI 110
V + + ++W++IR DG +GW+
Sbjct: 247 VNIKDDSMKDWKEIRLEDGKVGWV 270
>gi|95928741|ref|ZP_01311487.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95135086|gb|EAT16739.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 357
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 10/69 (14%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG----- 170
SG R+ + + L P+ S I+ K++ G L+ + W
Sbjct: 284 SGIRT-----DTLRIVTVNNLRLRASPNKNSSIINKLQLGQLVMVISKKKNWIEIQYTCS 338
Query: 171 YNLDTEGWI 179
+GW+
Sbjct: 339 DTEIYQGWV 347
>gi|255013872|ref|ZP_05285998.1| hypothetical protein B2_08187 [Bacteroides sp. 2_1_7]
Length = 255
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F L + F + + A + + + + A + P T + L +G
Sbjct: 166 FYLGVLFIIMVVFANIFASDQKAEMINRKHAIVFAPTVTVKSSPDASGTDLFV-LHEGTN 224
Query: 88 VEVVKEYENWRQIRDFDGTIGWI 110
V V W +I DG +GW+
Sbjct: 225 VTVKSTLGEWSEIELEDGNVGWM 247
>gi|60681977|ref|YP_212121.1| aerotolerance-related exported protein [Bacteroides fragilis NCTC
9343]
gi|60493411|emb|CAH08197.1| aerotolerance-related exported protein [Bacteroides fragilis NCTC
9343]
Length = 278
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F I F + ++A + E+ I + R P L +G
Sbjct: 188 FIAGIIFLIVVVMANVFASKQKEELLNRDTAIIMSPSVTVRSTPSEN-GTSLFILHEGHK 246
Query: 88 VEVVKE-YENWRQIRDFDGTIGWI 110
V + + ++W++IR DG +GW+
Sbjct: 247 VNIKDDSMKDWKEIRLEDGKVGWV 270
>gi|326938652|gb|AEA14548.1| S-layer protein/N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 535
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 226 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 323
>gi|304382533|ref|ZP_07365028.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304336364|gb|EFM02605.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 854
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
+ P + + + G VE+ W IR DG GWI+ S L
Sbjct: 799 PSVTLKKTPSKVSSDLFVIHE-GTKVEIEDGTMAQWYMIRLADGREGWISASSL 851
>gi|260460754|ref|ZP_05809004.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033331|gb|EEW34592.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 105
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ + +P+ S ++ ++ G I + G W T GW
Sbjct: 50 FLAVRTRPNSSSRMIGQLFNGDHTEIFDRRGNWYQVEIGGTTGWA 94
>gi|228938150|ref|ZP_04100768.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971025|ref|ZP_04131662.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977629|ref|ZP_04138019.1| Uncharacterized cell wall amidase [Bacillus thuringiensis Bt407]
gi|228782099|gb|EEM30287.1| Uncharacterized cell wall amidase [Bacillus thuringiensis Bt407]
gi|228788834|gb|EEM36776.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821508|gb|EEM67515.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 548
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|229042754|ref|ZP_04190493.1| Uncharacterized cell wall amidase [Bacillus cereus AH676]
gi|228726588|gb|EEL77806.1| Uncharacterized cell wall amidase [Bacillus cereus AH676]
Length = 548
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|229149223|ref|ZP_04277463.1| Uncharacterized cell wall amidase [Bacillus cereus m1550]
gi|228634253|gb|EEK90842.1| Uncharacterized cell wall amidase [Bacillus cereus m1550]
Length = 548
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|115525757|ref|YP_782668.1| NLP/P60 family lipoprotein [Rhodopseudomonas palustris BisA53]
gi|115519704|gb|ABJ07688.1| NLP/P60 protein [Rhodopseudomonas palustris BisA53]
Length = 279
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 2/86 (2%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-- 168
KSL +A L + P + + + G +T+ E +W
Sbjct: 15 AKSLEGQVDAARFIAGEDCEIVDAIAPLRQAPSPDAPLETEALRGERVTVYERRDDWAWG 74
Query: 169 FGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ G++ + + P K
Sbjct: 75 QLNSDGYVGYLPVDALGAVGPAPTHK 100
>gi|228906632|ref|ZP_04070507.1| Uncharacterized cell wall amidase [Bacillus thuringiensis IBL 200]
gi|228853015|gb|EEM97794.1| Uncharacterized cell wall amidase [Bacillus thuringiensis IBL 200]
Length = 551
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I +G W +
Sbjct: 242 PSLSSGISANQHNPQM-VEIKEERDGWIKIGTSNGDK-W-------------TPLVEKTE 286
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 287 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 339
>gi|118588760|ref|ZP_01546168.1| hypothetical protein SIAM614_18679 [Stappia aggregata IAM 12614]
gi|118438746|gb|EAV45379.1| hypothetical protein SIAM614_18679 [Stappia aggregata IAM 12614]
Length = 482
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 116 SGKRSAIVSPWNRKTNNPI-----YINLYKKPDIQSIIVAKVEPGVLLTIRECS------ 164
S R W + P +N PD+ ++ + G L++ C
Sbjct: 375 SDNRLVSSGGWLSENGGPSGRVKSNVNFRSSPDVGGQVLGMLPAGATLSLTGCMIRGDKV 434
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G W G GW+ + +
Sbjct: 435 GIWYQGQFEGQTGWVSARYV 454
>gi|291548684|emb|CBL24946.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Ruminococcus torques L2-14]
Length = 364
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 22/56 (39%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N Y + + D S V K+ + E W + + EG++ + ++
Sbjct: 80 SNTGDYTYIRSEADENSEWVGKLYSDSAAVVLEYLDGWTKIRSGNAEGYVPTETLF 135
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 90 VVKEY-ENWRQIRDFDGTIGWINKSLL-----SGKRSAIVSPWNRKTNNPIYINLYKKPD 143
VV EY + W +IR G++ L + RS + N T +N+ K
Sbjct: 109 VVLEYLDGWTKIR-SGNAEGYVPTETLFTGEEARSRSDEYTNEN-VTVTADCLNVRKGHG 166
Query: 144 IQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWI 179
+ ++ ++ G L + W + GW+
Sbjct: 167 TDTTVLTQIGQGEEYLVTADPVDGWYPIQVGEVNGWV 203
>gi|126660998|ref|ZP_01732084.1| hypothetical protein CY0110_15200 [Cyanothece sp. CCY0110]
gi|126617697|gb|EAZ88480.1| hypothetical protein CY0110_15200 [Cyanothece sp. CCY0110]
Length = 92
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-------WRQIRDFDGTIGWINKSL 114
R N R GPG Y V T + G V V W++I +++G GW+
Sbjct: 32 GGRLNVRTGPGTNYRSV-TQVPNGTTVPVFDRASGQDGQSYTWQRI-NYNGVQGWVRSDY 89
Query: 115 L 115
+
Sbjct: 90 V 90
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYNLDTEGWIKK 181
++ +N+ P V +V G + + + + W +GW++
Sbjct: 28 TNSSGGRLNVRTGPGTNYRSVTQVPNGTTVPVFDRASGQDGQSYTWQRINYNGVQGWVRS 87
Query: 182 QKI 184
+
Sbjct: 88 DYV 90
>gi|255505708|ref|ZP_05347701.3| prophage LambdaSa04, mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase family protein
[Bryantella formatexigens DSM 14469]
gi|255266219|gb|EET59424.1| prophage LambdaSa04, mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase family protein
[Bryantella formatexigens DSM 14469]
Length = 486
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-TIGWINKS 113
P V I N R GPG Y + +G+ +V+E +G T GW
Sbjct: 421 PYEVKIDIDNLNIRTGPGTNYAKTGSMTGRGI-FTIVEEASG-------EGSTSGW--GR 470
Query: 114 LLSG 117
LLSG
Sbjct: 471 LLSG 474
>gi|49475986|ref|YP_034027.1| hypothetical protein BH12900 [Bartonella henselae str. Houston-1]
gi|49238794|emb|CAF28064.1| hypothetical protein BH12900 [Bartonella henselae str. Houston-1]
Length = 208
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKK 181
+ + L P +A G + I C + WC GW
Sbjct: 29 AVTKIARVASGQVVLRIGPATAYRAIAIAPTGAKVQINGCLSNKAWCSLSYNGKVGWASA 88
Query: 182 QKI 184
+ +
Sbjct: 89 RYL 91
>gi|168204437|ref|ZP_02630442.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
gi|170663920|gb|EDT16603.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
Length = 342
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVRTFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDAGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|288928460|ref|ZP_06422307.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331294|gb|EFC69878.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 847
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+LY + R + K+ I A+ F L+ I A+ + + K+ I A AN
Sbjct: 742 LLYFFNSRIPVRKVGFGCSI-AFAVLFVLSIIFAMYQKSALTSKEG----AIIMAPAANL 796
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
+ P I L +G V++ + W ++ DG GWI ++ +
Sbjct: 797 KKTP-IRSGADEAVLHEGTRVDIADRSIKGWLGVKLADGREGWIEQNTV 844
>gi|229097365|ref|ZP_04228327.1| Polysugar degrading enzyme [Bacillus cereus Rock3-29]
gi|228686176|gb|EEL40092.1| Polysugar degrading enzyme [Bacillus cereus Rock3-29]
Length = 333
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + ++ +V L + + W++K
Sbjct: 149 AILYINPSEKQKVL-EVSYNTRLPLLSEDSISYRVLLPNGQKAWLRKN 195
>gi|299145613|ref|ZP_07038681.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
gi|298516104|gb|EFI39985.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
Length = 277
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + KI S I L + + E + + + + R P
Sbjct: 179 QIMLKKIGFISGIILLIVTVCSNLFASQQKEHLVNRSEAI-----VMNPSVTVRSTPS-E 232
Query: 75 YTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
L +G V V + W++IR DG +GW+ S +
Sbjct: 233 SGTSLFILHEGRKVSVKDNSMKEWKEIRLEDGKVGWVPASAI 274
>gi|293371590|ref|ZP_06618004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292633435|gb|EFF52004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 277
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + KI S I L + + E + + + + R P
Sbjct: 179 QIMLKKIGFISGIILLIVTVCSNLFASQQKEHLVNRSEAI-----VMNPSVTVRSTPS-E 232
Query: 75 YTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
L +G V V + W++IR DG +GW+ S +
Sbjct: 233 SGTSLFILHEGRKVSVKDNSMKEWKEIRLEDGKVGWVPASAI 274
>gi|260170235|ref|ZP_05756647.1| hypothetical protein BacD2_00045 [Bacteroides sp. D2]
gi|315918598|ref|ZP_07914838.1| BatE [Bacteroides sp. D2]
gi|313692473|gb|EFS29308.1| BatE [Bacteroides sp. D2]
Length = 277
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + KI S I L + + E + + + + R P
Sbjct: 179 QIMLKKIGFISGIILLIVTVCSNLFASQQKEHLVNRSEAI-----VMNPSVTVRSTPS-E 232
Query: 75 YTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
L +G V V + W++IR DG +GW+ S +
Sbjct: 233 SGTSLFILHEGRKVSVKDNSMKEWKEIRLEDGKVGWVPASAI 274
>gi|160882766|ref|ZP_02063769.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
gi|237720672|ref|ZP_04551153.1| BatE [Bacteroides sp. 2_2_4]
gi|156111790|gb|EDO13535.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
gi|229449507|gb|EEO55298.1| BatE [Bacteroides sp. 2_2_4]
Length = 277
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + KI S I L + + E + + + + R P
Sbjct: 179 QIMLKKIGFISGIILLIVTVCSNLFASQQKEHLVNRSEAI-----VMNPSVTVRSTPS-E 232
Query: 75 YTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
L +G V V + W++IR DG +GW+ S +
Sbjct: 233 SGTSLFILHEGRKVSVKDNSMKEWKEIRLEDGKVGWVPASAI 274
>gi|323137781|ref|ZP_08072857.1| NLP/P60 protein [Methylocystis sp. ATCC 49242]
gi|322397078|gb|EFX99603.1| NLP/P60 protein [Methylocystis sp. ATCC 49242]
Length = 283
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTI-RECSGE-WCFGYNLDTEGWIKKQKIW 185
+++ ++P + I +V G +T+ E G W GWI +W
Sbjct: 43 VDMRREPRPDASIDTQVLFGERVTVYDELEGWAWAQLSRDGYVGWIAANTLW 94
>gi|304407534|ref|ZP_07389186.1| SpoIID/LytB domain protein [Paenibacillus curdlanolyticus YK9]
gi|304343485|gb|EFM09327.1| SpoIID/LytB domain protein [Paenibacillus curdlanolyticus YK9]
Length = 694
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII--VAKVE 153
NW ++ G G++ + LLS + +N+ + P + + V K+
Sbjct: 448 NWYRVVLPTGESGFVREDLLSDTGKVNPVGARIFATSAEGVNVRQTPIVNEALASVGKLP 507
Query: 154 PG----VLLTIRECSG-EWC 168
G V+ ++ E + W
Sbjct: 508 KGTNVVVIDSVVESNNMNWV 527
>gi|167760270|ref|ZP_02432397.1| hypothetical protein CLOSCI_02643 [Clostridium scindens ATCC 35704]
gi|167662153|gb|EDS06283.1| hypothetical protein CLOSCI_02643 [Clostridium scindens ATCC 35704]
Length = 300
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +P S V K+ P I GEW + G++ I
Sbjct: 83 IRSEPTTDSEWVGKLYPDYAAKIIGPVGEWTQVQSGSVTGYVYSDYI 129
>gi|75762707|ref|ZP_00742543.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228899559|ref|ZP_04063815.1| Uncharacterized cell wall amidase [Bacillus thuringiensis IBL 4222]
gi|74489810|gb|EAO53190.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228860149|gb|EEN04553.1| Uncharacterized cell wall amidase [Bacillus thuringiensis IBL 4222]
Length = 548
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHSAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|332716306|ref|YP_004443772.1| hypothetical protein AGROH133_11681 [Agrobacterium sp. H13-3]
gi|325062991|gb|ADY66681.1| hypothetical protein AGROH133_11681 [Agrobacterium sp. H13-3]
Length = 267
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G LT+ C + WC + GW+ + I
Sbjct: 33 VNMRSGPSTAYPAVVVIPVGAPLTVHGCLSDTPWCDVSFVSGRGWVAGRYI 83
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R GP Y V + G P+ V + W + G GW+ +
Sbjct: 33 VNMRSGPSTAYPAV-VVIPVGAPLTVHGCLSDTPWCDVSFVSG-RGWVAGRYI 83
>gi|260593417|ref|ZP_05858875.1| conserved hypothetical protein [Prevotella veroralis F0319]
gi|260534693|gb|EEX17310.1| conserved hypothetical protein [Prevotella veroralis F0319]
Length = 157
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTY------LTKGLPVEVVKEYENWRQIRDFDGT 106
V I RIGPG Y + Y ++KG + + Y NW ++ DG
Sbjct: 92 VVINGVGVRMRIGPGKEYGFLQYYNGKAYTVSKGTSLPFLGAYGNWYKVLFEDGE 146
>gi|312948782|gb|ADR29609.1| hypothetical protein NRG857_21005 [Escherichia coli O83:H1 str. NRG
857C]
Length = 483
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTI---GWINKSLL 115
I R P M+ V L K PV V+ + + W I+ G GW+N+S
Sbjct: 420 ITGENVRLRNRPS-MHGDVLVTLQKYTPVIVIDKSDRKWLYIQLSLGDQKIYGWVNRSYT 478
Query: 116 SGKRS 120
Sbjct: 479 KALNH 483
>gi|222035904|emb|CAP78649.1| hypothetical protein LF82_700 [Escherichia coli LF82]
Length = 482
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTI---GWINKSLL 115
I R P M+ V L K PV V+ + + W I+ G GW+N+S
Sbjct: 419 ITGENVRLRNRPS-MHGDVLVTLQKYTPVIVIDKSDRKWLYIQLSLGDQKIYGWVNRSYT 477
Query: 116 SGKRS 120
Sbjct: 478 KALNH 482
>gi|160932998|ref|ZP_02080387.1| hypothetical protein CLOLEP_01840 [Clostridium leptum DSM 753]
gi|156868072|gb|EDO61444.1| hypothetical protein CLOLEP_01840 [Clostridium leptum DSM 753]
Length = 857
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V S N R P + VV + + V ++ E W QI G G+++
Sbjct: 798 VVDAGSSLNVRKAPSVNADVVGSLYKDDI-VTIISETSGWYQIVTSTGVSGYVSA 851
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGWIKK 181
+ +N+ K P + + +V + ++TI + W + G++
Sbjct: 792 TQKGKVVVDAGSSLNVRKAPSVNADVVGSLYKDDIVTIISETSGWYQIVTSTGVSGYVSA 851
Query: 182 QKI 184
+ I
Sbjct: 852 EYI 854
>gi|315125920|ref|YP_004067923.1| hypothetical protein PSM_A0824 [Pseudoalteromonas sp. SM9913]
gi|315014434|gb|ADT67772.1| hypothetical protein PSM_A0824 [Pseudoalteromonas sp. SM9913]
Length = 201
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KE 93
AP ++ + E + I R G Y ++ + + G + ++ E
Sbjct: 12 TAAPFMSQAEEAQSTPPTNAKTAYIIDNLYTFMRSGASKDYRLLGS-IDAGTQLTLLSDE 70
Query: 94 YENWRQIRDFDGTIGWINKSLLSGK 118
+ +++D GW+ +S
Sbjct: 71 QNGFIKVKDDKDREGWVEAKFISES 95
>gi|154419945|ref|XP_001582988.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121917227|gb|EAY22002.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 219
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
P+ I A N R GP + Y+++ + L + V++ E W +I+
Sbjct: 18 PQAGRITADVLNIRDGPSVGYSIIGS-LDQNQVVQLYDEIGGWHKIK 63
>gi|119489106|ref|ZP_01622012.1| hypothetical protein L8106_22426 [Lyngbya sp. PCC 8106]
gi|119454855|gb|EAW35999.1| hypothetical protein L8106_22426 [Lyngbya sp. PCC 8106]
Length = 2399
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 10/84 (11%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC------- 163
++ L+ S S N+ I +NL + P ++ + G LTI E
Sbjct: 2160 HQWKLNLPNSGGSSTKTGYVNSSIGLNLRRDPSTNQAKISTLPNGTKLTILEKVTGQPYY 2219
Query: 164 ---SGEWCFGYNLDTEGWIKKQKI 184
+W +T G++ +
Sbjct: 2220 PGNRTDWYKVKVGNTVGYVAAAYV 2243
>gi|118593385|ref|ZP_01550769.1| hypothetical protein SIAM614_00722 [Stappia aggregata IAM 12614]
gi|118434063|gb|EAV40720.1| hypothetical protein SIAM614_00722 [Stappia aggregata IAM 12614]
Length = 210
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 121 AIVSPWNRKTNNPIYI---NLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDT 175
A ++P + T + + N+ P + ++ + + + C+ WC
Sbjct: 5 AALTPGHASTETAVTVSALNMRAGPSTRYPVINVLTGNASVKVFGCTAAATWCDVGFGYK 64
Query: 176 EGWIKKQKI 184
GW+ + +
Sbjct: 65 RGWVSARYL 73
>gi|325279029|ref|YP_004251571.1| NLP/P60 protein [Odoribacter splanchnicus DSM 20712]
gi|324310838|gb|ADY31391.1| NLP/P60 protein [Odoribacter splanchnicus DSM 20712]
Length = 263
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQ 182
+ + + +S +V+++ G + I E +W + + EGWI ++
Sbjct: 11 VPMRSEKSERSEMVSQILFGEVFEILEVDEKWVYVRMLHDRYEGWIDRK 59
>gi|229108491|ref|ZP_04238108.1| Uncharacterized cell wall amidase [Bacillus cereus Rock1-15]
gi|229126313|ref|ZP_04255331.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-Cer4]
gi|228657305|gb|EEL13125.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-Cer4]
gi|228675118|gb|EEL30345.1| Uncharacterized cell wall amidase [Bacillus cereus Rock1-15]
Length = 543
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|229143606|ref|ZP_04272030.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-ST24]
gi|228639863|gb|EEK96269.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-ST24]
Length = 543
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 239 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|226325564|ref|ZP_03801082.1| hypothetical protein COPCOM_03369 [Coprococcus comes ATCC 27758]
gi|225206047|gb|EEG88401.1| hypothetical protein COPCOM_03369 [Coprococcus comes ATCC 27758]
Length = 281
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +P +S V K+ PG I GEW + D G++K + I
Sbjct: 60 VRSEPTKESEYVGKLYPGYAAKITGPVGEWTAVESGDVTGYVKTEYI 106
>gi|225389443|ref|ZP_03759167.1| hypothetical protein CLOSTASPAR_03191 [Clostridium asparagiforme
DSM 15981]
gi|225044490|gb|EEG54736.1| hypothetical protein CLOSTASPAR_03191 [Clostridium asparagiforme
DSM 15981]
Length = 721
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWINK 112
T+KA+ N R G G Y+ V L+ G V + E W QI+ + G+ G +
Sbjct: 42 ATVKAATLNVRSGAGTNYSAVGK-LSSGQSVTIRGEQTGTDGNKWYQIQ-YTGSDGTVKT 99
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE---PGVLLTIRECSGEW 167
+S I + ++ Y+N P+ + ++ P + + +W
Sbjct: 100 GYVSSVYIKIPVSYTTDSDFEAYLNSQGFPESYKEGLRQLHAQYPNWVFRSLKTGLDW 157
>gi|150016528|ref|YP_001308782.1| SH3 type 3 domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149902993|gb|ABR33826.1| SH3, type 3 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 228
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
V + AS N R GPG ++ G + + ++Y NW
Sbjct: 170 VKVTASALNVRDGPGTDNNIIGVAYN-GEQLIIFRQYGNW 208
>gi|296447480|ref|ZP_06889404.1| NLP/P60 protein [Methylosinus trichosporium OB3b]
gi|296255018|gb|EFH02121.1| NLP/P60 protein [Methylosinus trichosporium OB3b]
Length = 281
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKK 181
R ++ K+P + + + G ++T+ + W GW+
Sbjct: 31 VEGRRMQVKEGVADVKKEPRPDARLDTQALYGEIVTVYDEEEGWAWAQLERDSYVGWLPA 90
Query: 182 QKIW 185
+W
Sbjct: 91 NLLW 94
>gi|228909072|ref|ZP_04072901.1| S-layer y domain ribonuclease [Bacillus thuringiensis IBL 200]
gi|228850580|gb|EEM95405.1| S-layer y domain ribonuclease [Bacillus thuringiensis IBL 200]
Length = 944
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
++T++++ P + + G +EV+ + W Q++ + G +G++ +S+
Sbjct: 133 WITLRSAVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVK-YQGEVGYVRIFESV 191
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + L + +W
Sbjct: 192 VIGESPVRSWDVTKEATNLSHFMIAEYHKDPEKYFPPNIQKKFDKQLDSDLALLANGLKW 251
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 252 IDQLKEALYLDNKQGWVQEEGKW 274
>gi|229171663|ref|ZP_04299238.1| Uncharacterized cell wall amidase [Bacillus cereus MM3]
gi|228611809|gb|EEK69056.1| Uncharacterized cell wall amidase [Bacillus cereus MM3]
Length = 540
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
++ + GWI +++ K + Y + S ++AK E ++
Sbjct: 246 KVVVKEERDGWI--KIVTSKGEKWTPLKEKTEVINEGFTTYAEASHSSKVLAKREAQKVV 303
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
I E W W+ K ++
Sbjct: 304 VIEE-KDSWIRIRTNSGFQWVDKNQL 328
>gi|227537167|ref|ZP_03967216.1| possible peptidoglycan-binding LysM [Sphingobacterium spiritivorum
ATCC 33300]
gi|300772997|ref|ZP_07082866.1| peptidoglycan-binding LysM [Sphingobacterium spiritivorum ATCC
33861]
gi|227242882|gb|EEI92897.1| possible peptidoglycan-binding LysM [Sphingobacterium spiritivorum
ATCC 33300]
gi|300759168|gb|EFK55995.1| peptidoglycan-binding LysM [Sphingobacterium spiritivorum ATCC
33861]
Length = 139
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL 115
S N R GPG +V KG + ++ + + W +R D G+ L
Sbjct: 84 SNLNIRKGPGTDQPIVGK-AAKGEIITLISKANDQWWLVRTKDNEEGYCYAQYL 136
>gi|254478352|ref|ZP_05091731.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035710|gb|EEB76405.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 591
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKK 181
V+ +NLY+ PD+ S IV ++ G++ + G++ + G++
Sbjct: 156 VNDTQAFIKTKGVVNLYQSPDLNSPIVGTLQAGMIHEVVNQVGDFYYIVAQRFGYGYVYA 215
Query: 182 QKIWGIYPGEVFK 194
+ E+FK
Sbjct: 216 NDV------ELFK 222
>gi|254449996|ref|ZP_05063433.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
gi|198264402|gb|EDY88672.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ +P S I+ ++ P L + + W + + GW+ + +
Sbjct: 3 ADVASDDVLNIRAEPAASSEIIGELGPDTLNVEVLRTLDGWGYVGAGERSGWVSMRFL 60
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
N R P ++ L VEV++ + W + + + GW++ L+
Sbjct: 9 DVLNIRAEPAASSEIIGELGPDTLNVEVLRTLDGWGYVGAGERS-GWVSMRFLAPNP 64
>gi|325996525|gb|ADZ51930.1| hypothetical protein hp2018_1213 [Helicobacter pylori 2018]
Length = 191
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ KKPL V + S N R P I ++ + L K V+V++ +W +I
Sbjct: 118 TPTTSTMGKKPLEYKVAV--SGVNVRAFPSIKGKIIGSLL-KDKSVKVLEIQNDWAEIEF 174
Query: 103 FDGTIGWINKSLLSG 117
T G++ LL
Sbjct: 175 SHETKGYVFLKLLKK 189
>gi|228919725|ref|ZP_04083087.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840079|gb|EEM85358.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 548
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|229177421|ref|ZP_04304803.1| Uncharacterized cell wall amidase [Bacillus cereus 172560W]
gi|228606053|gb|EEK63492.1| Uncharacterized cell wall amidase [Bacillus cereus 172560W]
Length = 548
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|229189091|ref|ZP_04316118.1| Uncharacterized cell wall amidase [Bacillus cereus ATCC 10876]
gi|228594394|gb|EEK52186.1| Uncharacterized cell wall amidase [Bacillus cereus ATCC 10876]
Length = 548
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|218230815|ref|YP_002365673.1| S-layer protein [Bacillus cereus B4264]
gi|218158772|gb|ACK58764.1| S-layer protein [Bacillus cereus B4264]
Length = 535
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 226 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 323
>gi|168212703|ref|ZP_02638328.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
gi|170715674|gb|EDT27856.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
Length = 342
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDDGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|168209089|ref|ZP_02634714.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
gi|170712969|gb|EDT25151.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
Length = 342
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDDGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|218895935|ref|YP_002444346.1| S-layer protein [Bacillus cereus G9842]
gi|218544881|gb|ACK97275.1| S-layer protein [Bacillus cereus G9842]
Length = 535
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 226 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 323
>gi|30019057|ref|NP_830688.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
gi|29894599|gb|AAP07889.1| S-layer protein / N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
Length = 530
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 226 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + T+ E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQV-TVIEENGSWIRIRMGAGFQWVNKNQL 323
>gi|296501617|ref|YP_003663317.1| S-layer protein/N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
gi|296322669|gb|ADH05597.1| S-layer protein/N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
Length = 530
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + VE+ +E + W +I +G W +
Sbjct: 226 PSLSSGISANQHNP-QTVEIKEERDGWIKIATSNGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + T+ E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQV-TVIEENGSWIRIRMGAGFQWVNKNQL 323
>gi|299821427|ref|ZP_07053315.1| invasion associated protein p60 [Listeria grayi DSM 20601]
gi|299817092|gb|EFI84328.1| invasion associated protein p60 [Listeria grayi DSM 20601]
Length = 513
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R P ++ T L G V+V E W +I +G G++N LS
Sbjct: 81 SVSATWLNVRHAPDANEKIL-TSLKGGTVVKVESSEANGWNKISFDNGKTGYVNGKYLSD 139
Query: 118 KRSAIVSPWNRKTNNPIY 135
+ A T+
Sbjct: 140 AKVAAPVVTKAVTHKAEA 157
>gi|206968414|ref|ZP_03229370.1| S-layer protein [Bacillus cereus AH1134]
gi|206737334|gb|EDZ54481.1| S-layer protein [Bacillus cereus AH1134]
Length = 535
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 226 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 323
>gi|258410996|ref|ZP_05681276.1| cell wall amidase lytH [Staphylococcus aureus A9763]
gi|257840146|gb|EEV64610.1| cell wall amidase lytH [Staphylococcus aureus A9763]
Length = 291
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKS 113
R GP Y V+ + KG + + + W ++ D WI
Sbjct: 54 LRTGPNAAYPVIYK-VEKGDHFKKIGKVGKWIEVEDTSSNEKSWIAGW 100
>gi|126273155|ref|XP_001369016.1| PREDICTED: similar to SH3 multiple domains 1 isoform 2 [Monodelphis
domestica]
Length = 1105
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLESQNGTRDDSEINTSKAGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 292
>gi|148262748|ref|YP_001229454.1| hypothetical protein Gura_0669 [Geobacter uraniireducens Rf4]
gi|146396248|gb|ABQ24881.1| hypothetical protein Gura_0669 [Geobacter uraniireducens Rf4]
Length = 156
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + AK+ LLTI SG+W G + K I
Sbjct: 43 APVKAKIRYNDLLTIISRSGDWYKVSFKGVNGCVHKSAI 81
>gi|315038669|ref|YP_004032237.1| phage endopeptidase [Lactobacillus amylovorus GRL 1112]
gi|312276802|gb|ADQ59442.1| phage endopeptidase [Lactobacillus amylovorus GRL 1112]
Length = 1158
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFG 170
+ K + NR T + I +Y +P + V G I + + W
Sbjct: 597 TRKPDSPEKIINRITKDKGKIEMYSEPSKGAAENWSVPAGQPFDITKSAQGADGKTWYQI 656
Query: 171 YNLDTEGWIKKQ 182
GWI
Sbjct: 657 TYAGHTGWIPSD 668
>gi|225570090|ref|ZP_03779115.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
gi|225161560|gb|EEG74179.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
Length = 556
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+K R G+ V+ L KG V V++ +NW+++R +G IG++ S L
Sbjct: 145 AAVKKDT-QVRYQGGVKSPVLSE-LKKGGEVTVIENEDNWKKVRTKNGFIGYVKNSALKD 202
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+R IV W T + + + ++S ++++++ G +T+ E W
Sbjct: 131 ERVVIVGDWGEHTVAAVKKDTQVRYQGGVKSPVLSELKKGGEVTVIENEDNWKKVRTKNG 190
Query: 175 TEGWIKKQKI 184
G++K +
Sbjct: 191 FIGYVKNSAL 200
>gi|166033055|ref|ZP_02235884.1| hypothetical protein DORFOR_02777 [Dorea formicigenerans ATCC
27755]
gi|166027412|gb|EDR46169.1| hypothetical protein DORFOR_02777 [Dorea formicigenerans ATCC
27755]
Length = 303
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +P QS V K+ PG I GEW + G++ Q I
Sbjct: 83 IRSEPTKQSEWVGKLYPGYAAKIVGPVGEWTKIESGSVTGYVYSQYI 129
>gi|119383155|ref|YP_914211.1| SH3 type 3 domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119372922|gb|ABL68515.1| SH3, type 3 domain protein [Paracoccus denitrificans PD1222]
Length = 206
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 134 IYINLYKKPDIQSIIVAKVE---PGVLLTIRECSGEWCFGYNLDTEGWI------KKQKI 184
+N+ + PD Q+ I+ ++ GV L R+ SG+W +T GW+ + +
Sbjct: 36 DKLNVREAPDGQAKIIGRLASTAKGVELLDRDASGKWGLVNVGETTGWVALRFLKPQATV 95
Query: 185 W 185
W
Sbjct: 96 W 96
>gi|266621661|ref|ZP_06114596.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288866665|gb|EFC98963.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 326
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWI 179
A +P KT +N+ +P ++ ++ PG V+ ++ +W + ++
Sbjct: 242 ATEAPMIYKTTATPNLNVRAEPSTTGAVLGRLAPGTVVDFVQTYDQQWSVIMFEGKQAYV 301
Query: 180 KKQKI 184
Q +
Sbjct: 302 SSQYL 306
>gi|198276561|ref|ZP_03209092.1| hypothetical protein BACPLE_02756 [Bacteroides plebeius DSM 17135]
gi|198270649|gb|EDY94919.1| hypothetical protein BACPLE_02756 [Bacteroides plebeius DSM 17135]
Length = 216
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L++ F P + S + ++ +P + V I N R P TV+ + G
Sbjct: 4 VFLSLMFAACPGIFFSLNAQGYK---IPEKVVVITKQNVNVRQAPQASSTVL-EKASSGA 59
Query: 87 PVEVVKEYENWRQIRD 102
E V + +W +++D
Sbjct: 60 MYEFVSQQGSWYEVKD 75
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
P +N+ + P S ++ K G + G W
Sbjct: 27 IPEKVVVITKQNVNVRQAPQASSTVLEKASSGAMYEFVSQQGSWYEVK 74
>gi|109900151|ref|YP_663406.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
gi|109702432|gb|ABG42352.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
Length = 199
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 9/129 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC- 79
+L+ L F L I A + + + ++++ GPG Y ++
Sbjct: 1 MLKRFLFSVTCALFLLPSIQASAQQSQGET-----QYIS-DDLFTFLHSGPGRNYRILGS 54
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA--IVSPWNRKTNNPIYIN 137
+ V N+ +I D GW++ +S ++S +V ++ + N
Sbjct: 55 VVAGSEVTVLQTDSDSNYVEIVDDKDRTGWVDGEFVSPQKSLRELVPGLQQQLADATQSN 114
Query: 138 LYKKPDIQS 146
++ + S
Sbjct: 115 NAQQDENDS 123
>gi|332291970|ref|YP_004430579.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170056|gb|AEE19311.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 254
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 19 PKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ +SL+ LA++ L A + +I + P F A + + P +
Sbjct: 162 RALFVSSLVSLLLAVFSILFAYSAFA---KISKDNPAIVF----AKESQVKGEPTLSSQE 214
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
L +G V V++ +NW++I DG GWI
Sbjct: 215 AFL-LHEGTKVMVLETVDNWKKILLVDGRTGWI 246
>gi|110799035|ref|YP_694826.1| glycosy hydrolase family protein [Clostridium perfringens ATCC
13124]
gi|110673682|gb|ABG82669.1| glycosyl hydrolase, family 25 [Clostridium perfringens ATCC 13124]
Length = 342
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDDGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|18309364|ref|NP_561298.1| autolytic lysozyme [Clostridium perfringens str. 13]
gi|20141459|sp|P26836|LYS_CLOPE RecName: Full=Probable autolytic lysozyme; AltName:
Full=1,4-beta-N-acetylmuramidase; AltName:
Full=Autolysin
gi|18144040|dbj|BAB80088.1| probable autolytic lysozyme [Clostridium perfringens str. 13]
Length = 342
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDDGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|47095777|ref|ZP_00233383.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|47015920|gb|EAL06847.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
Length = 178
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ V E W Q++D TIGW+N + + K +Y P +
Sbjct: 60 KAVTEKGTWYQLQDQGKTIGWVNSDAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDN 119
Query: 146 SIIVAKVEP--GVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V + G L I + W + D + GW K
Sbjct: 120 SKVVTNLNDYLGKELDIDRRADVKNEYWYRIKSDDGKVIGWSKAD 164
>gi|332884784|gb|EGK05040.1| hypothetical protein HMPREF9456_03193 [Dysgonomonas mossii DSM
22836]
Length = 280
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
I ++ S ++ + + + + PDI S + + G ++I + W
Sbjct: 202 IFANVFSFRQKSRLEYRDTAVVMAASAPMVSSPDINSKELTVLHAGTKVSITKEDRNWLE 261
Query: 170 GYNLDTE-GWIKKQKI 184
+ GWI++ K+
Sbjct: 262 VEIDNGTVGWIQRDKL 277
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ F I F + I A + + A+ A P I + L G
Sbjct: 189 IAFYTGIVFIIVVIFANVFSFRQKSRLEYRDTAVVMAASAPMVSSPDINSKELTV-LHAG 247
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + KE NW ++ +GT+GWI + L
Sbjct: 248 TKVSITKEDRNWLEVEIDNGTVGWIQRDKL 277
>gi|299140488|ref|ZP_07033626.1| aerotolerance-related exported protein [Prevotella oris C735]
gi|298577454|gb|EFI49322.1| aerotolerance-related exported protein [Prevotella oris C735]
Length = 255
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+F L+I F + + + P V++K + +V + +G
Sbjct: 173 LLFVLSILFAIQQKMDFENRNGAIIIVPT---VSLKKTPV--------KNSVDVVVVHEG 221
Query: 86 LPVEVVKE-YENWRQIRDFDGTIGWINKS 113
V ++ W +R DG GW++ S
Sbjct: 222 TKVNIIDRGIRGWYNVRLSDGHEGWLSVS 250
>gi|332975917|gb|EGK12793.1| NLP/P60 family protein [Desmospora sp. 8437]
Length = 303
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 17/112 (15%)
Query: 85 GLPVEVVKEYENWRQIR--------DFDGTIGWINKSLLSGKRSA----IVSPWNRKTNN 132
G PV+V++E E W ++ D G GWI S L+ R SP+ T +
Sbjct: 59 GAPVQVMEEREGWVRVCVPGQFTPKDSGGYPGWIPASQLTFDREYHQAWETSPFAWVTAD 118
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L +++ + ++ + E G+ G I +++
Sbjct: 119 RSRLLLDSGEEVELSFMTRLP-----QVGERDGDVIVRTPGGETGRIPAEEV 165
>gi|153854360|ref|ZP_01995659.1| hypothetical protein DORLON_01654 [Dorea longicatena DSM 13814]
gi|149753135|gb|EDM63066.1| hypothetical protein DORLON_01654 [Dorea longicatena DSM 13814]
Length = 311
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +P +S V K+ P I GEW + + G++ + I
Sbjct: 83 IRSEPTTESEWVGKLYPDYAAKIIGPVGEWTKVQSGNVTGYVYSEYI 129
>gi|168216531|ref|ZP_02642156.1| glycosyl hydrolase, family 25 [Clostridium perfringens NCTC 8239]
gi|182381280|gb|EDT78759.1| glycosyl hydrolase, family 25 [Clostridium perfringens NCTC 8239]
Length = 342
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A ++ G + I + W G++K +
Sbjct: 301 AIIDDGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|153009892|ref|YP_001371107.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561780|gb|ABS15278.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 167
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + + + G LT+R C+ WC T GW + +
Sbjct: 29 TNLNIRTGPGTRYATLGSIPSGAPLTVRGCTSGYGWCQVSYGPTYGWASSRYL 81
>gi|317051450|ref|YP_004112566.1| hypothetical protein Selin_1275 [Desulfurispirillum indicum S5]
gi|316946534|gb|ADU66010.1| protein of unknown function DUF1058 [Desulfurispirillum indicum S5]
Length = 159
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 27/72 (37%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SL++ + + + L ++P + ++ G + + E G W
Sbjct: 7 SLMAVLAMGMAAMASTMYVQSREAPLMQEPSFGAAVLGTFTQGREVRVLETQGTWHRVQA 66
Query: 173 LDTEGWIKKQKI 184
+ +GW+ + +
Sbjct: 67 EEQQGWMSRLAL 78
Score = 34.6 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 48/134 (35%), Gaps = 18/134 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ ++ +A+ +A + + +++ A P V+ T+
Sbjct: 1 MKKGVLSLMAVLAMGMAAMAST--------------MYVQSREAPLMQEPSFGAAVLGTF 46
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+G V V++ W +++ + GW+++ L+ + ++ ++
Sbjct: 47 T-QGREVRVLETQGTWHRVQ-AEEQQGWMSRLALTSNPPLGRVGVIGAGEERLEDSVRRR 104
Query: 142 PDIQSIIVAKVEPG 155
+++ A G
Sbjct: 105 --TSAVVTAGAARG 116
>gi|255505701|ref|ZP_05347631.3| glycosyl hydrolase, family 18 [Bryantella formatexigens DSM 14469]
gi|255266378|gb|EET59583.1| glycosyl hydrolase, family 18 [Bryantella formatexigens DSM 14469]
Length = 589
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYIN--LYKKPDIQSIIVAKVEPGVLLTIRECSGEWC-FGYNLD 174
+R I + W KT I N L + I+S I+ +++ ++T+ E +W
Sbjct: 180 ERIVITNEWGEKTLATIRKNGKLRYQGGIKSPILRELQKNEVVTVLEPMEDWTGVLTQDG 239
Query: 175 TEGWIKKQKI 184
G+I+ ++
Sbjct: 240 YFGYIQNDRL 249
>gi|330983677|gb|EGH81780.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 280
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+VT+K+S N R P V L G V +W + T+G+I+KSL++
Sbjct: 146 YVTLKSS--NVRAAPSANADKVG-GLQAGTEFNAVGSTGDWILVGRKGVTVGYISKSLVA 202
Query: 117 GKRSAIVSPWNRKTNNPIYI--------NLYKKPDIQSIIVA 150
K A+ + I + +L P + I A
Sbjct: 203 PKAVAVAKVKPSVNLDDISVASAETRGFDLDSVPTTSASIAA 244
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 118 KRSAIV--SPWNRKTNNPIYI----NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
KR+A V +P + P N+ P + V ++ G +G+W
Sbjct: 128 KRTAKVQAAPSLKLIQAPYVTLKSSNVRAAPSANADKVGGLQAGTEFNAVGSTGDWILVG 187
Query: 172 NLDTE-GWIKKQKI 184
G+I K +
Sbjct: 188 RKGVTVGYISKSLV 201
>gi|226228854|ref|YP_002762960.1| hypothetical protein GAU_3448 [Gemmatimonas aurantiaca T-27]
gi|226092045|dbj|BAH40490.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLS 116
VT ++S N R GPG ++ V ++ Y W IR + G+ + L+
Sbjct: 80 VTTESSNLNIRKGPGTDQPIIGKAAHHSE-VTLLSRYNSEWALIRSANNEEGYCSLKYLT 138
Query: 117 G 117
Sbjct: 139 A 139
>gi|224052767|ref|XP_002193780.1| PREDICTED: SH3 and PX domains 2A [Taeniopygia guttata]
Length = 1080
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 188 LQAGEVVDVIEKNESGWWFVSTAE-EQGWVPATYLESQNGTRDDSDINTSKFGEEEKYVT 246
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + + GV + + + + W + L EGW +
Sbjct: 247 IQPYASQGKDEIG-FKKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 293
>gi|319902113|ref|YP_004161841.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
helcogenes P 36-108]
gi|319417144|gb|ADV44255.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
helcogenes P 36-108]
Length = 277
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
+ P L +G VE+ + W++IR DG +GW++ S +
Sbjct: 221 SPSVTVHSTPS-DSGTSLFILHEGHKVEIKDDSMREWKEIRLEDGKVGWVSSSAI 274
>gi|182625318|ref|ZP_02953092.1| N-acetylmuramoyl-L-alanine amidase domain protein [Clostridium
perfringens D str. JGS1721]
gi|177909476|gb|EDT71923.1| N-acetylmuramoyl-L-alanine amidase domain protein [Clostridium
perfringens D str. JGS1721]
Length = 415
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 93 EYENWRQIR----DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
W ++ D + + G++ +R + N + + K P
Sbjct: 315 RTNGWLRVTFYRADGNPSDGYVRYEGEQKER---FYKKGKVVNVRTSLTVRKGPGTNYSN 371
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDT----EGWIKKQKI 184
+ +EP + I E W + G++ ++ I
Sbjct: 372 IGSLEPNEKVDILEKVEGWYYIEYNARNERKRGYVSEKYI 411
>gi|217958501|ref|YP_002337049.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH187]
gi|229137716|ref|ZP_04266319.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-ST26]
gi|217068200|gb|ACJ82450.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH187]
gi|228645691|gb|EEL01922.1| Uncharacterized cell wall amidase [Bacillus cereus BDRD-ST26]
Length = 529
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQMVVVKEQRADGWLKIVTSKGEK-W-------------TPLTEKTE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 265 TINQDFTAYELASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|329889505|ref|ZP_08267848.1| hypothetical protein BDIM_11910 [Brevundimonas diminuta ATCC 11568]
gi|328844806|gb|EGF94370.1| hypothetical protein BDIM_11910 [Brevundimonas diminuta ATCC 11568]
Length = 229
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
S R GPG Y + L+ G P W QI GW+N ++
Sbjct: 177 ATSNLRIRSGPGTQYRQAGS-LSAGQPFTATGSQGEWVQI----AGGGWVNARYVA 227
>gi|311070105|ref|YP_003975028.1| hypothetical protein BATR1942_15890 [Bacillus atrophaeus 1942]
gi|310870622|gb|ADP34097.1| hypothetical protein BATR1942_15890 [Bacillus atrophaeus 1942]
Length = 178
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 27/184 (14%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALS--HEKEIFEKK--------PLPRFVTIKASRANS 67
M + + +FTLA A L S K+ + P+ ++ + A N
Sbjct: 1 MKRTAKTLSVFTLAAGVTAASALGASPLQAKQPMKAVSIDDLYSYPIDSYL-VSAEALNV 59
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R L G ++++ +W ++ +G G+++ + +
Sbjct: 60 RTKASASSAKA-DTLHLGDSLKMISFSNADWAKVHYKNGKTGFVS--------THYIVKE 110
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSG----EWCFGYNLDTEGWIK 180
N+Y +S V L + +G +W F G+IK
Sbjct: 111 ATTVKTTTKTNVYASAAGKSTASLPANTSVSFLGWNKTKNGGFDYDWVFVDYGGKTGYIK 170
Query: 181 KQKI 184
+ +
Sbjct: 171 TKDL 174
>gi|301156042|emb|CBW15513.1| predicted signal transduction protein (SH3 domain) [Haemophilus
parainfluenzae T3T1]
Length = 202
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + G V V+ + + IRD WI S LS S+
Sbjct: 36 LRKGAGDQFKIAGA-IQSGEAVTVLGQEGKYTLIRDNKNREAWILTSELSSTPSS 89
>gi|260432037|ref|ZP_05786008.1| NLP/P60 family protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415865|gb|EEX09124.1| NLP/P60 family protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 245
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 88 VEVVKEYENWRQI-RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
++V ++ W ++ D DG GW+ L A W T+ Y +PDI+S
Sbjct: 31 LDVTEQSGGWCRVASDKDGYQGWLRADQLGPDVPATHWIWAPATHA------YSEPDIKS 84
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + +R + G+I +
Sbjct: 85 PDRVSLSFGSRIVVRSQQDRFVETEL----GFIPAAHV 118
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
NR ++L + P + ++ G L + E SG WC +GW++ ++
Sbjct: 2 NRARVIRPVVDLLRNP--KGPRDRQLLYGDGLDVTEQSGGWCRVASDKDGYQGWLRADQL 59
>gi|240142045|ref|YP_002966555.1| hypothetical protein MexAM1_META2p0345 [Methylobacterium extorquens
AM1]
gi|240011989|gb|ACS43214.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 110
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDTEG 177
A S + +N+ + P + IV + P + RE G W F + EG
Sbjct: 25 HAQSSMRVVGVASNDVLNVREYPSPGARIVGIIPPDGRGVVPNRERVGNWIFVSHRRVEG 84
Query: 178 WIKKQKI 184
W+ ++ +
Sbjct: 85 WVDRRYV 91
>gi|301310435|ref|ZP_07216374.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
gi|300832009|gb|EFK62640.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
Length = 267
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F L I F + + A + ++ + + A + P T + L +G
Sbjct: 178 FYLGILFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFV-LHEGTN 236
Query: 88 VEVVKEYENWRQIRDFDGTIGWI 110
V V W +I DG +GW+
Sbjct: 237 VTVKSTLGEWSEIELEDGNVGWM 259
>gi|262381902|ref|ZP_06075040.1| BatE protein [Bacteroides sp. 2_1_33B]
gi|262297079|gb|EEY85009.1| BatE protein [Bacteroides sp. 2_1_33B]
Length = 253
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F L I F + + A + ++ + + A + P T + L +G
Sbjct: 164 FYLGILFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFV-LHEGTN 222
Query: 88 VEVVKEYENWRQIRDFDGTIGWI 110
V V W +I DG +GW+
Sbjct: 223 VTVKSTLGEWSEIELEDGNVGWM 245
>gi|254756803|ref|ZP_05208832.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Australia 94]
Length = 125
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 17/129 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R G G Y V+ L KG EV + W + G WI + + +
Sbjct: 1 INLRKGLGTGYGVI-RQLGKGESYEVWGQSNGWLNL----GGNQWIYNDSSYIRYTGEST 55
Query: 125 PWNRK---------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
P + + T + + K P IV V G W
Sbjct: 56 PTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNV---GG 112
Query: 176 EGWIKKQKI 184
+ W+ + +
Sbjct: 113 DQWVSGEYV 121
>gi|169342910|ref|ZP_02863939.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
gi|169298819|gb|EDS80893.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
Length = 342
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V Y W I + G+++ + + A N ++N+ ++ S +V
Sbjct: 248 VDSNYLGWYLIE-YKNITGYVSSKYVEKFQMATT------YNVSDFLNVRERGTTDSKVV 300
Query: 150 AKVEPGVLLTIRECSGE---WCFGYNL-DTEGWIKKQKI 184
A + G + I + W G++K +
Sbjct: 301 AIINAGEIFRIDWVDSDYIGWYRITTKYGKNGFVKADFV 339
>gi|170741529|ref|YP_001770184.1| SH3 type 3 domain-containing protein [Methylobacterium sp. 4-46]
gi|168195803|gb|ACA17750.1| SH3 type 3 domain protein [Methylobacterium sp. 4-46]
Length = 104
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDTEG 177
A + T +N+ + P ++ IV + P + E +G W F EG
Sbjct: 21 HAQQTLRVIDTAPNDVLNVREYPTAEARIVGVIPPNGRGIVPTGEVNGNWIFVRYRKVEG 80
Query: 178 WIKKQKIWGIYP 189
W+ ++ +YP
Sbjct: 81 WVSRRF---VYP 89
>gi|126732878|ref|ZP_01748669.1| hypothetical protein SSE37_18407 [Sagittula stellata E-37]
gi|126706654|gb|EBA05728.1| hypothetical protein SSE37_18407 [Sagittula stellata E-37]
Length = 194
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEW 167
W + ++ + +N+ P Q+ IV + P + G W
Sbjct: 4 WTAVAAVAQDGTLPALHRVTGVAADDVLNVRAGPSAQTEIVGTLAPDATGVGVVRTEGGW 63
Query: 168 CFGYNLDTEGWI 179
+ GW
Sbjct: 64 GLVNAGERAGWA 75
>gi|126291462|ref|XP_001380540.1| PREDICTED: similar to SH3 and PX domains 2B [Monodelphis domestica]
Length = 1063
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + D GW+ + L G+ + Y +Y
Sbjct: 328 GQVVDIIEKNESGWWFVSTAD-EQGWVPATCLEGQDGGQDEFSLQPEEEEKYTVIYPYAA 386
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 387 RDQDEI-NLERGAMVEVIQKNLEGWWKIRFQGKEGWAPASYL 427
>gi|299822526|ref|ZP_07054412.1| possible N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM
20601]
gi|299816055|gb|EFI83293.1| possible N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM
20601]
Length = 726
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)
Query: 81 YLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLL------SGKRSAIVSPWNRKTNN 132
Y + L + E + NW QI++ T+GWI+K L + K++ V+ + N
Sbjct: 443 YSNRDLKIIREATTKRGNWAQIQEGSKTLGWISKGSLTYLDKITSKKTLKVNAKVKAQKN 502
Query: 133 PIYINLYKKPDIQSIIVAKV------EPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
Q+ A + E V+ SG W + GW+ K +
Sbjct: 503 DSVYTQVYNTTSQAKKAANLSSYNGKEVQVVSEAITKSGTWSQIKSGSKTLGWVSKAHL 561
>gi|152976109|ref|YP_001375626.1| 3D domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152024861|gb|ABS22631.1| 3D domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ T L +E + W Q ++G ++ S L+ K
Sbjct: 87 VTANALNVRAGMSASSEILGTLKKDDL-IETTNQIQNGWLQFH-YNGKTAYVYASFLTEK 144
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V ++ + + +V
Sbjct: 145 APVKVVTPVKEKAPVKQVQTKAQVVQSKPVV 175
>gi|228943352|ref|ZP_04105804.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975733|ref|ZP_04136270.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228784009|gb|EEM32051.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228816332|gb|EEM62505.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 300
Score = 36.5 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
N R GP +V+ L KG +V + NW G WI +
Sbjct: 172 VNLRSGPSTENSVI-RKLQKGEAYKVWNKLGNWLHF----GGNQWIYYN 215
>gi|229065264|ref|ZP_04200545.1| S-layer y domain ribonuclease [Bacillus cereus AH603]
gi|228716028|gb|EEL67762.1| S-layer y domain ribonuclease [Bacillus cereus AH603]
Length = 478
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW--INKSL 114
++T++++ P + + + G +EV+ + W Q++ + G IG+ + +S+
Sbjct: 113 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVK-YQGEIGYVRVLESV 171
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + L + +W
Sbjct: 172 IIGESPVRSWDVAKEATNLSHFMITEYHKDPEKYFPPNIQKKFDKQLDSDLNVLANGLQW 231
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW++++ W
Sbjct: 232 IDQLKEALYLDNKQGWVQEEGKW 254
>gi|254515170|ref|ZP_05127231.1| hypothetical protein NOR53_803 [gamma proteobacterium NOR5-3]
gi|219677413|gb|EED33778.1| hypothetical protein NOR53_803 [gamma proteobacterium NOR5-3]
Length = 214
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 18/97 (18%)
Query: 56 RFVTIKASRANS--RIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIG 108
R+++ GPG Y L K +P + E NW ++ GT G
Sbjct: 15 RYIS---DEVFVVLHAGPGSNYR--W--LGKLIPGTQLVEKRRSTDGNWAEVATSRGTEG 67
Query: 109 WINKSLLSGKRSAIV----SPWNRKTNNPIYINLYKK 141
W+ LS + A V + L
Sbjct: 68 WVQAEYLSTEPPAQVRLPAVVRQLEEAQQESAALRSS 104
>gi|149633044|ref|XP_001507279.1| PREDICTED: similar to SH3 and PX domains 2B [Ornithorhynchus
anatinus]
Length = 907
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + DG GW+ + L G+ A + Y +Y
Sbjct: 187 GQLVDIIEKNESGWWFVSTADGQ-GWVPATCLEGQDGAQEELALQPEEEEKYTVIYPYTA 245
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ ++ G + + + + W EGW +
Sbjct: 246 RDQDEIS-LDRGATVEVMQKNLEGWWKIRYQGKEGWAPASYL 286
>gi|78043845|ref|YP_361316.1| hypothetical protein CHY_2523 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995960|gb|ABB14859.1| hypothetical protein CHY_2523 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 1245
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 8/60 (13%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--------LDTEGWIKKQKIW 185
NL P + I+A ++ G + G W G+I W
Sbjct: 1180 TKTNLRVAPQANAKILAVLKKGYKMRYLGREGVWNKVRVSIWSNGGYKTYTGYIYDPNFW 1239
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ + V + ++ N R+ P ++ L KG + + W ++R
Sbjct: 1171 VGQMVQLTYTKTNLRVAPQANAKILAV-LKKGYKMRYLGREGVWNKVR 1217
>gi|4838142|gb|AAD30862.1|AF116251_5 BatE [Bacteroides fragilis]
gi|301163415|emb|CBW22966.1| aerotolerance-related exported protein [Bacteroides fragilis 638R]
Length = 278
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
I F + ++A + E+ I + R P L +G V +
Sbjct: 192 IIFLIVVVMANVFASKQKEELLNRDTAIIMSPSVTVRSTPSEN-GTSLFILHEGHKVNIK 250
Query: 92 KE-YENWRQIRDFDGTIGWI 110
+ ++W++IR DG +GW+
Sbjct: 251 DDSMKDWKEIRLEDGKVGWV 270
>gi|253565654|ref|ZP_04843109.1| BatE [Bacteroides sp. 3_2_5]
gi|251945933|gb|EES86340.1| BatE [Bacteroides sp. 3_2_5]
Length = 278
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
I F + ++A + E+ I + R P L +G V +
Sbjct: 192 IIFLIVVVMANVFASKQKEELLNRDTAIIMSPSVTVRSTPSEN-GTSLFILHEGHKVNIK 250
Query: 92 KE-YENWRQIRDFDGTIGWI 110
+ ++W++IR DG +GW+
Sbjct: 251 DDSMKDWKEIRLEDGKVGWV 270
>gi|169836803|ref|ZP_02869991.1| hypothetical protein cdivTM_06807 [candidate division TM7
single-cell isolate TM7a]
Length = 65
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
++ K AN R P ++ + G ++ + +Y +W + D +
Sbjct: 1 MSSKDGYANLREKPTTNSKIISK-MDNGTVMKYITKYGDWYYVFDVE 46
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ Y NL +KP S I++K++ G ++ G+W +
Sbjct: 2 SSKDGYANLREKPTTNSKIISKMDNGTVMKYITKYGDWYYV 42
>gi|228951379|ref|ZP_04113488.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228808316|gb|EEM54826.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 535
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 226 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 270
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E G W W+ K ++
Sbjct: 271 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-KGSWIRIRMGAGFQWVNKNQL 323
>gi|229068556|ref|ZP_04201857.1| Uncharacterized cell wall amidase [Bacillus cereus F65185]
gi|228714698|gb|EEL66572.1| Uncharacterized cell wall amidase [Bacillus cereus F65185]
Length = 552
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 243 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 287
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S I+ + I E +G W W+ K ++
Sbjct: 288 VINEGFTTYAEASSSSKIMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 340
>gi|327265228|ref|XP_003217410.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Anolis
carolinensis]
Length = 906
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
L G V+++++ E W + D GW+ + L + + + Y+ +Y
Sbjct: 172 LCAGQVVDIIEKNESGWWFVSTLD-EQGWVPATCLEVQDGVQDEFSMQPEDEETYMVIYP 230
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ I + + W EGW +
Sbjct: 231 Y-TARDQDEMNLEKGAVVEIIQKNLEGWWKIRYQGQEGWAPASYL 274
>gi|291521161|emb|CBK79454.1| Rhs family protein [Coprococcus catus GD/7]
Length = 2241
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 42/143 (29%), Gaps = 19/143 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-KEYEN----WRQIRDFDGTI---GWI 110
T+ + N R G Y + KG + +Y++ W IR G++
Sbjct: 982 TVNEDKVNIRAAAGTAYQAL-VMAPKGTSATIHGADYDSDGSIWYAIRAKISNKIYDGYM 1040
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---- 166
+ L+ S V R +NL + G + I+ + +
Sbjct: 1041 KGTYLNLSISGAV-VTVRGVVAADNLNLRAGAGTGYSAKTMMAAGTTVGIKGAAKDSSGT 1099
Query: 167 -WCFG----YNLDTEGWIKKQKI 184
W +G+ +
Sbjct: 1100 KWYRLAFTKNGTQYDGYASADYV 1122
>gi|254557682|ref|YP_003064099.1| muramidase [Lactobacillus plantarum JDM1]
gi|254046609|gb|ACT63402.1| muramidase [Lactobacillus plantarum JDM1]
Length = 611
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 46/163 (28%), Gaps = 19/163 (11%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK---ASRANSRIGPGIMYTVVCTYL 82
L T AI++ P + R V+ N R P + VV TY
Sbjct: 447 LASTGAIHYVALPSTVSIPSTSTYTPTNPMRNVSGTYTFTENTNIRTAPSLSAPVVGTYY 506
Query: 83 TKG---LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+V E W Q G ++ S S + + + + N+
Sbjct: 507 PGDSVTYTGQVNAEGYIWLQYLSGSGNTRYVAMSGTSAQYN--TNNISGTFTFTQQTNIR 564
Query: 140 KKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDTEGWIK 180
P + IV PG V+ W++
Sbjct: 565 TAPSTSASIVGVYYPGDSVIYN--------AQITADGYT-WLQ 598
>gi|119581836|gb|EAW61432.1| SH3 and PX domains 2B, isoform CRA_b [Homo sapiens]
Length = 430
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|304405007|ref|ZP_07386667.1| peptidase M14 carboxypeptidase A [Paenibacillus curdlanolyticus
YK9]
gi|304345886|gb|EFM11720.1| peptidase M14 carboxypeptidase A [Paenibacillus curdlanolyticus
YK9]
Length = 571
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 5/95 (5%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSL-LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ +W +I+ G+ WIN L+G I P I L++ P I
Sbjct: 403 LRTKGDWVEIKVPGGSR-WINAKYTLTGPFDPITEPTVIADQA---IPLFQSPLDAKPIQ 458
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G+ L + E W W+K +
Sbjct: 459 KTLAAGIALPVIEKWKTWLLVKTPSGSYWVKASSV 493
>gi|303242490|ref|ZP_07328970.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
gi|302589958|gb|EFL59726.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
Length = 583
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 67 SRIGPGIMYTVVCTYLTKGLP--------VEVVKEYENWRQIRDFDGTIGWINKSLL 115
R G I Y ++ + + V EY+ W ++R +DG IG+I K +
Sbjct: 174 IRKGHTIRYPII---RKLDMNSANSVEKEMRVFGEYDKWYKVRTWDGAIGYIEKRFV 227
>gi|323698288|ref|ZP_08110200.1| SH3 type 3 domain protein [Desulfovibrio sp. ND132]
gi|323458220|gb|EGB14085.1| SH3 type 3 domain protein [Desulfovibrio desulfuricans ND132]
Length = 476
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 11/114 (9%)
Query: 66 NSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQI-----RDFDGTI--GWINKSLLSG 117
N R G L G V V E + W I D G+ N L+
Sbjct: 35 NLRDG--RSPKAEWIGSLYAGQKVRVAHEKDGWVAIYEPAATDPSEAKAAGYSNAKFLTS 92
Query: 118 KRSAI-VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
R PW + +N+ +P+++ V +E G + I +W
Sbjct: 93 TRDRYEPKPWGELVRSSTKLNIRSEPNVRGTKVRTLEAGEPVLIDFPEDDWTMV 146
>gi|152977457|ref|YP_001376974.1| cell wall hydrolase/autolysin [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026209|gb|ABS23979.1| cell wall hydrolase/autolysin [Bacillus cytotoxicus NVH 391-98]
Length = 538
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V K + W +I G W + L KR AI S +
Sbjct: 223 PSLSSGITANQHAPQIIVVKEKRADGWLKIVTNKGDK-W---TPLQEKREAIHSTFTT-- 276
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y++ S ++ P + I E G W W+ K ++
Sbjct: 277 --------YQEASHSSKVLGTYAPQTVTVIEE-KGSWIRIRTNAGFQWVDKNQL 321
>gi|229000931|ref|ZP_04160393.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228758815|gb|EEM07897.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 349
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS- 116
I+ + N R GP Y+V+ L K +V E + W + G W+ S +
Sbjct: 204 IEGNNVNLRKGPDASYSVI-RQLNKPESYKVWGEKDGWLNL----GGNQWVYNNPSYIKF 258
Query: 117 -GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
K S R + + Y P Q VA
Sbjct: 259 EKKESVNPIVGKRVVSKVDNLRFYDSPSWQDKDVA 293
>gi|148691807|gb|EDL23754.1| RIKEN cDNA G431001E03, isoform CRA_a [Mus musculus]
Length = 820
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 124 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 181
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 182 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 223
>gi|321254458|ref|XP_003193080.1| protein kinase regulator [Cryptococcus gattii WM276]
gi|317459549|gb|ADV21293.1| protein kinase regulator, putative [Cryptococcus gattii WM276]
Length = 699
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 82 LTKGLPVEVVKEYENWRQI-RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
L +G V V K+Y +W + R+ G GW+ + GK S +S R+ +
Sbjct: 611 LKEGEKVRVYKKYCHWSYVIRNDTGERGWVPAWFV-GKTSITISAGLREAETAVKPKPSS 669
Query: 141 KPDIQ 145
P
Sbjct: 670 GPKPT 674
>gi|302387622|ref|YP_003823444.1| cell wall hydrolase/autolysin [Clostridium saccharolyticum WM1]
gi|302198250|gb|ADL05821.1| cell wall hydrolase/autolysin [Clostridium saccharolyticum WM1]
Length = 379
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ AP A + E V + S+ N R P ++ T L KG ++
Sbjct: 80 AVTMETAPAFAAADET-----------VYVTGSQVNIRKFPSSQGAILGT-LEKGASLKR 127
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSG----KRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+NW ++ + +I+ +S + + +P I + P Q+
Sbjct: 128 TGYSDNWSRVI-YKDKECYISTQYVSKDKPAQETVTDAPAVSGNGTGKLIAI--DPGHQA 184
Query: 147 IIVAKVEP 154
++ EP
Sbjct: 185 KGNSEKEP 192
>gi|297538414|ref|YP_003674183.1| SH3 type 3 domain-containing protein [Methylotenera sp. 301]
gi|297257761|gb|ADI29606.1| SH3 type 3 domain protein [Methylotenera sp. 301]
Length = 171
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 17/43 (39%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +P + + + G L I G W + + GW++
Sbjct: 36 IRFEPFADAKVTGTLNRGDSLEIISKKGAWLQVKSKKSAGWVR 78
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
R P V T L +G +E++ + W Q++ + GW+ LLS KR
Sbjct: 36 IRFEPFADAKVTGT-LNRGDSLEIISKKGAWLQVK-SKKSAGWV--RLLSVKR 84
>gi|260426285|ref|ZP_05780264.1| putative hypothetical Gifsy-1 prophage protein [Citreicella sp.
SE45]
gi|260420777|gb|EEX14028.1| putative hypothetical Gifsy-1 prophage protein [Citreicella sp.
SE45]
Length = 224
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----W 97
S + P+ R + A+ N R GPG + V+ L G V+ + + W
Sbjct: 145 SGAAGQAPEAPVARVAGVAANDLLNVRSGPGTEHGVIGA-LANGDQVKRLGCENHGGSEW 203
Query: 98 RQIRDFDG--TIGWINKSLL 115
I GW+N L
Sbjct: 204 CMIEMMTDMHQRGWVNGRYL 223
>gi|156379232|ref|XP_001631362.1| predicted protein [Nematostella vectensis]
gi|156218401|gb|EDO39299.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V+V+++ E+ D DG +GW+ S L + S ++ + Y+
Sbjct: 24 LRAGNVVDVIQKNEHGWWFVDLDGELGWVPASYLEPRDG--TSEFDDPEHVIYYVIGEYN 81
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
D S + K E + + + W + GW +
Sbjct: 82 KDDDSEVSLK-EGETVEVLEQSEDGWWLVRTQNFSVGWAPSNYL 124
>gi|326792038|ref|YP_004309859.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326542802|gb|ADZ84661.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 272
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 57 FVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ ++K + N+ G G V +++ E+ I T +++K+L
Sbjct: 25 YGSLKQDVQVNTEAG-------EQLVKAAGQGVSILEVDEHNYLINIQGNTNQYVSKNL- 76
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T L ++P + ++ ++ ++ + E E+ D+
Sbjct: 77 ------VEIAGVITTTLSDETKLREEPTGEGALLTYLKANTMVMVLEKQNEFYKVKVDDS 130
Query: 176 EGWIKKQKI 184
G+I K ++
Sbjct: 131 VGYIYKGQL 139
>gi|93099936|gb|AAI15765.1| Sh3pxd2b protein [Mus musculus]
Length = 647
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|332248200|ref|XP_003273250.1| PREDICTED: SH3 and PX domain-containing protein 2B [Nomascus
leucogenys]
Length = 803
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 168 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 225
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 226 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 267
>gi|206975618|ref|ZP_03236530.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
H3081.97]
gi|222094647|ref|YP_002528707.1| N-acetylmuramoyl-l-alanine amidase, family 3 [Bacillus cereus Q1]
gi|206746080|gb|EDZ57475.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
H3081.97]
gi|221238705|gb|ACM11415.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus cereus Q1]
Length = 530
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + V + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQMVVVKEQRADGWLKIVTSKGEK-W-------------TPLTEKTE 264
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 265 TINQDFTAYELASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|148691808|gb|EDL23755.1| RIKEN cDNA G431001E03, isoform CRA_b [Mus musculus]
Length = 447
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 152 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 209
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 210 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 251
>gi|109079767|ref|XP_001095586.1| PREDICTED: SH3 and PX domain-containing protein 2B [Macaca mulatta]
Length = 909
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|93099911|gb|AAI15712.1| Sh3pxd2b protein [Mus musculus]
Length = 647
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|148658051|ref|YP_001278256.1| SH3 type 3 domain-containing protein [Roseiflexus sp. RS-1]
gi|148570161|gb|ABQ92306.1| SH3, type 3 domain protein [Roseiflexus sp. RS-1]
Length = 270
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 44 HEKEIFEKKPLPRFVTIKA---SRANSRIGPGIM-YTVVCTYLTKGLPVEVVKEYEN--W 97
P+P +++ + N R P + V + +G V+++ +N W
Sbjct: 169 TSTATPTYPPVPIVSSLRGTVTNPGNVRADPNVSASPVD--RVNQGEEVQLLGRSDNGRW 226
Query: 98 RQIRDFDGTIGWINKSLLS 116
+ G GW++ +LLS
Sbjct: 227 YLVLTVRGVAGWVSAALLS 245
>gi|89075909|ref|ZP_01162284.1| hypothetical protein SKA34_18022 [Photobacterium sp. SKA34]
gi|89048350|gb|EAR53928.1| hypothetical protein SKA34_18022 [Photobacterium sp. SKA34]
Length = 205
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 19/141 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + L I + P+ + + I + GPG Y ++ +
Sbjct: 1 MKYLISLCLLICAVITPVANAAQVRYISDNLFT-----------YMHSGPGTQYRIIGS- 48
Query: 82 LTKGLPVEVV--KEYENWRQIRDFDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPI 134
+ G + ++ + + QI D G GW++ +S +R + + +
Sbjct: 49 IDAGSKITLINTNKAAGFSQITDDRGRNGWVDSKFVSTEIGLKERVPALQTELTEVKAKL 108
Query: 135 YINLYKKPDIQSIIVAKVEPG 155
L + + +
Sbjct: 109 AEALTSSDSQNAGLKNTLAQR 129
>gi|332708003|ref|ZP_08428001.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
gi|332353228|gb|EGJ32770.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
Length = 591
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
+R GP Y+ + T L KG V + +W ++ D+ WI + K + +++
Sbjct: 238 ARTGPSTSYSRL-TPLPKGTRAAVTGKQGDWLRL-DY---GAWIRQ-----KETKVIAGA 287
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ I + P I+ +E V +++++
Sbjct: 288 TPPKSIIRSITSRQVPGAT-EILFPLEIPVPVSVQQSD 324
>gi|291567650|dbj|BAI89922.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1482
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 12/108 (11%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDG 105
+ P+ R V+ +A A + + Y G P + + Y+ WR++RD G
Sbjct: 520 QALPIWREVSDRAGEA------TTLNNIGGVYRAIGQPQQALTYYQQALPIWREVRDRAG 573
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ + AI P T + + ++ ++ A +
Sbjct: 574 EATTLHN--IGAVYHAIGQPQEALTYFQQALPIRQEVSDRAGEAATLN 619
>gi|223461423|gb|AAI41307.1| SH3 and PX domains 2B [Mus musculus]
Length = 908
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|153853665|ref|ZP_01995045.1| hypothetical protein DORLON_01036 [Dorea longicatena DSM 13814]
gi|149753820|gb|EDM63751.1| hypothetical protein DORLON_01036 [Dorea longicatena DSM 13814]
Length = 575
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+K + R G+ V+ K V +++ ENW++IR +G IG++ + L
Sbjct: 164 ATVKKNT-QVRYQGGVKSPVLAELKKKDE-VTIIESEENWKKIRTKEGVIGYVKNNTLKN 221
Query: 118 K 118
+
Sbjct: 222 E 222
>gi|26354430|dbj|BAC40843.1| unnamed protein product [Mus musculus]
Length = 471
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|63055065|ref|NP_796338.2| SH3 and PX domain-containing protein 2B [Mus musculus]
gi|162416033|sp|A2AAY5|SPD2B_MOUSE RecName: Full=SH3 and PX domain-containing protein 2B; AltName:
Full=Factor for adipocyte differentiation 49; AltName:
Full=Tyrosine kinase substrate with four SH3 domains
gi|123276288|emb|CAM22517.1| SH3 and PX domains 2B [Mus musculus]
Length = 908
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|74140592|dbj|BAE42425.1| unnamed protein product [Mus musculus]
Length = 910
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|268607874|ref|ZP_06141605.1| cell wall hydrolase/autolysin [Ruminococcus flavefaciens FD-1]
Length = 245
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 19/53 (35%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
W T + +N+ P + ++ K+ G + I + W G+
Sbjct: 185 WGTVTTDGSNLNIRSYPSLSGTVIGKIPDGAQVMINGETNGWYVVNYNGVIGY 237
>gi|229028691|ref|ZP_04184803.1| Uncharacterized cell wall amidase [Bacillus cereus AH1271]
gi|228732625|gb|EEL83495.1| Uncharacterized cell wall amidase [Bacillus cereus AH1271]
Length = 529
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVKEQRADGWLKIVTSKGEK-W-------------TPLTEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 264 ETINQDFTAYETASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|229134509|ref|ZP_04263321.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
gi|228648954|gb|EEL04977.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
Length = 203
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKRS 120
N R GP +V+ L KG +V + NW + G WI + +G+++
Sbjct: 75 VNLRSGPSTSNSVI-RQLGKGESYKVWGKLGNWLNL----GGNQWIYYNPSYIRYNGEQT 129
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ V+ R + + Y VA
Sbjct: 130 SSVAGK-RVVSKVDNLRFYDSASWSDKDVA 158
>gi|211925505|dbj|BAG81976.1| FAD49 [Mus musculus]
Length = 910
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|332877621|ref|ZP_08445365.1| NlpC/P60 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684470|gb|EGJ57323.1| NlpC/P60 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 262
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
+ + PD + +V ++ G LL + E W +TEGW+ +I
Sbjct: 18 VPVRLAPDEGAEMVTQLLFGELLQVLEKHNSWSYIRLLFDNTEGWVDNNQI 68
>gi|303235663|ref|ZP_07322270.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
gi|302484110|gb|EFL47098.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
Length = 858
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+ + L F ++F L I ++S K +K I AS A + P
Sbjct: 760 TVGRRKLGFFAGLFFLLVFIFSISFAKTQRNEKTNKNQAIIVASIATVKTHPDGKSDNAT 819
Query: 80 TYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWI 110
T L +G VE++ + WR IR D GWI
Sbjct: 820 T-LHEGTKVEIIDRSLKEWRGIRLPDDKKGWI 850
>gi|116334021|ref|YP_795548.1| cell wall-associated hydrolase [Lactobacillus brevis ATCC 367]
gi|116099368|gb|ABJ64517.1| Cell wall-associated hydrolase [Lactobacillus brevis ATCC 367]
Length = 296
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
Query: 95 ENWRQI--------RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
NW + ++ G GW+ S L+ + + P + L D
Sbjct: 71 GNWAHVFVKRQANRQERRGYPGWVPLSQLTTQDEELAYPTTTVRLVQLTTPLL---DDDR 127
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V + G +LT +W +GWI Q
Sbjct: 128 QPVMDLPMGTILTTVAQDADWIQVVTPLGKGWITAQA 164
>gi|304440226|ref|ZP_07400116.1| glycoside hydrolase family 18 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371275|gb|EFM24891.1| glycoside hydrolase family 18 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 549
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--- 115
T+K N R + +V L + V E ++ ++R DG G+I K LL
Sbjct: 158 TLKGQGTNLREEASLQSPIV-KNLQGNEEILVFGEEGDFYKVRIKDGYKGYIKKDLLEVD 216
Query: 116 --SGKRSAIVSPWNRKTNNPIYIN 137
SGK S I + P+ +
Sbjct: 217 FGSGKFSTIKDTVTTEAKRPLNLT 240
>gi|296193644|ref|XP_002744622.1| PREDICTED: SH3 and PX domain-containing protein 2B [Callithrix
jacchus]
Length = 909
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|47564408|ref|ZP_00235453.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47558560|gb|EAL16883.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 591
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + + + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGAGLEHQTI-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|298375544|ref|ZP_06985501.1| tetratricopeptide repeat containing protein [Bacteroides sp.
3_1_19]
gi|298268044|gb|EFI09700.1| tetratricopeptide repeat containing protein [Bacteroides sp.
3_1_19]
Length = 255
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F L + F + + A + ++ + + A + P T + L +G
Sbjct: 166 FYLGVLFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFV-LHEGTN 224
Query: 88 VEVVKEYENWRQIRDFDGTIGWI 110
V V W +I DG +GW+
Sbjct: 225 VTVKSTLGEWSEIELEDGNVGWM 247
>gi|150007599|ref|YP_001302342.1| hypothetical protein BDI_0952 [Parabacteroides distasonis ATCC
8503]
gi|256839786|ref|ZP_05545295.1| BatE protein [Parabacteroides sp. D13]
gi|149936023|gb|ABR42720.1| BatE, TRP domain containing protein [Parabacteroides distasonis
ATCC 8503]
gi|256738716|gb|EEU52041.1| BatE protein [Parabacteroides sp. D13]
Length = 255
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F L + F + + A + ++ + + A + P T + L +G
Sbjct: 166 FYLGVLFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFV-LHEGTN 224
Query: 88 VEVVKEYENWRQIRDFDGTIGWI 110
V V W +I DG +GW+
Sbjct: 225 VTVKSTLGEWSEIELEDGNVGWM 247
>gi|119510204|ref|ZP_01629342.1| N-acetylmuramoyl-L-alanine amidase [Nodularia spumigena CCY9414]
gi|119465154|gb|EAW46053.1| N-acetylmuramoyl-L-alanine amidase [Nodularia spumigena CCY9414]
Length = 557
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GP Y+ + T L KG V W ++ D+ GWIN + + ++
Sbjct: 210 RTGPSTDYSRL-TPLPKGTQASVTGSEGEWLRL-DY---GGWINS-----QETRVLPGAI 259
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + P IV ++ V +++++
Sbjct: 260 PPRTTIRSVGYRRLPSAT-EIVFPLQVPVPVSVQQSDN 296
>gi|29655310|ref|NP_821002.1| hypothetical protein CBU_2029 [Coxiella burnetii RSA 493]
gi|154707464|ref|YP_001425434.1| hypothetical protein CBUD_2130 [Coxiella burnetii Dugway 5J108-111]
gi|161830390|ref|YP_001595949.1| hypothetical protein COXBURSA331_A0054 [Coxiella burnetii RSA 331]
gi|212213489|ref|YP_002304425.1| hypothetical protein CbuG_2039 [Coxiella burnetii CbuG_Q212]
gi|29542582|gb|AAO91516.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|154356750|gb|ABS78212.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
gi|161762257|gb|ABX77899.1| hypothetical protein COXBURSA331_A0054 [Coxiella burnetii RSA 331]
gi|212011899|gb|ACJ19280.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 210
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--N 172
LSG S + + + +NLY+KP + I+ K+ P L W
Sbjct: 15 LSG--SITYATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPR 72
Query: 173 LDTEGWIKKQK 183
GW+ + +
Sbjct: 73 NGEVGWVNRDQ 83
>gi|327267503|ref|XP_003218540.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Anolis
carolinensis]
Length = 1062
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L SG R ++ Y+
Sbjct: 172 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLESQSGVRDDSEINMSKGGEEEKYVT 230
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + + GV + + + + W + L EGW +
Sbjct: 231 IQPYTSQGKDEIG-FDKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 277
>gi|196249429|ref|ZP_03148127.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. G11MC16]
gi|196211186|gb|EDY05947.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. G11MC16]
Length = 719
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 37/138 (26%)
Query: 55 PRFVT-----------IKASRANSRIGPGIM----------YTVVCTYLTKGLPVEVVKE 93
P +V+ I+ S N R P + Y L V+ +
Sbjct: 382 PAYVSSSYIKVYTRGFIQGSGVNLRTTPDLKTDENIYEQVGYGTAFLLLDSN----VIGD 437
Query: 94 --YEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
N W +I + +++ SL+ +N+ S I
Sbjct: 438 PFQGNTKWYKI-LYKNKELYVHSSLVR-------LDGKVGVVTADVLNVRANKSTNSHIY 489
Query: 150 AKVEPGVLLTIRECSGEW 167
K+ G +TI E +W
Sbjct: 490 GKLYKGAEVTILEEGSDW 507
>gi|168333561|ref|ZP_02691826.1| NLP/P60 [Epulopiscium sp. 'N.t. morphotype B']
Length = 224
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
N R+ P + +V T T V+++ + W QI + + W++ + +
Sbjct: 39 VNIRMSPNLNANIVDTVSTSD--VKILGQNNGWYQIVFAE-DVAWVSSTYVD 87
>gi|138896736|ref|YP_001127189.1| S-layer protein / peptidoglycanendo-beta-N-acetylglucosaminidase
[Geobacillus thermodenitrificans NG80-2]
gi|134268249|gb|ABO68444.1| S-layer protein / Peptidoglycanendo-beta-N-acetylglucosaminidase
[Geobacillus thermodenitrificans NG80-2]
Length = 628
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 44 HEKEIFEKKPLPRF--VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----- 96
+ +K + R+ + N R+ P ++ V Y PV VV
Sbjct: 541 QADQFLGRKDIGRYKVMVTNTESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGY 600
Query: 97 -WRQIR-DFDGTIGWINKSLLS 116
W +I D +I LLS
Sbjct: 601 VWYEIVPDLPTQKAYIRGDLLS 622
>gi|119912968|ref|XP_596546.3| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|297487542|ref|XP_002696316.1| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|296475909|gb|DAA18024.1| SH3-domain kinase binding protein 1-like [Bos taurus]
Length = 886
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 155 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 212
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 213 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 254
>gi|313201466|ref|YP_004040124.1| sh3 type 3 domain-containing protein [Methylovorus sp. MP688]
gi|312440782|gb|ADQ84888.1| SH3 type 3 domain protein [Methylovorus sp. MP688]
Length = 169
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L K+P + K+ G + I G W GW++
Sbjct: 32 LRKEPYNDAKTSGKLVRGDKVDILSKQGAWLQVKTSKASGWVR 74
>gi|189465627|ref|ZP_03014412.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
17393]
gi|189437901|gb|EDV06886.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
17393]
Length = 279
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L SL + +I+ + F I F + ILA + + +
Sbjct: 169 LLASLYFFFFSKQIVWKKIGFIAGIVFLVLVILANVFAFQQKNELLNRNSAIVLTPSVTV 228
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKS 113
R P L +G VE+ W++IR DG +GW+ S
Sbjct: 229 RSTPS-ESGTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPAS 274
>gi|299132294|ref|ZP_07025489.1| NLP/P60 protein [Afipia sp. 1NLS2]
gi|298592431|gb|EFI52631.1| NLP/P60 protein [Afipia sp. 1NLS2]
Length = 285
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEGWIKKQKI 184
+ +P + ++ + G +TI + GE W GW+ + +
Sbjct: 41 DALAPVRCEPSHNATLLTQALKGERVTIYDRDGEGWAWGQLNADGYVGWMPESAL 95
>gi|67920610|ref|ZP_00514130.1| hypothetical protein CwatDRAFT_6433 [Crocosphaera watsonii WH 8501]
gi|67858094|gb|EAM53333.1| hypothetical protein CwatDRAFT_6433 [Crocosphaera watsonii WH 8501]
Length = 209
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 30/99 (30%), Gaps = 17/99 (17%)
Query: 103 FDGTIGWINKSLLS--GKRSAIVS----PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
DG ++ S G+ A+V+ + INL P + S P
Sbjct: 103 PDGAKLYVYWDTSSSYGQPPALVANPRVATLTTRDARTQINLRTAPTVYSRANGYGLPKD 162
Query: 157 LLTIREC---------SGEWCFGYN--LDTEGWIKKQKI 184
+ I EC WC GWI+ I
Sbjct: 163 EVHILECVIDQDTVGSELNWCRVRFLQSGAIGWIRSDFI 201
>gi|228963980|ref|ZP_04125111.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228795710|gb|EEM43186.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 421
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + VE+ +E + W +I G W +
Sbjct: 239 PSLSSGISANQHNPQM-VEIKEERDGWIKIATSKGDK-W-------------TPLVEKTE 283
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S ++ + I E +G W W+ K ++
Sbjct: 284 VINEGFTTYAEASSSSKVMGTHNAQQVTVIEE-NGSWIRIRMGAGFQWVNKNQL 336
>gi|46446116|ref|YP_007481.1| hypothetical protein pc0482 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399757|emb|CAF23206.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 431
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 14/116 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I ++ R+ P V+ Y L V + E E++ + G++ ++ +
Sbjct: 61 ITKNKVRLRLHPTYDGYVLREYNQNDLLV-INGETEDFYTAQPPKDIKGFVFRTYI---- 115
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNL 173
+N+ +PD++S ++A++ G V I + +W
Sbjct: 116 -------LDNIVEGSRVNVRLQPDLESPVIAQLNSGDKVEGVISSTNNKWLEITIP 164
>gi|16080650|ref|NP_391478.1| hypothetical protein BSU35970 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311552|ref|ZP_03593399.1| hypothetical protein Bsubs1_19456 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315879|ref|ZP_03597684.1| hypothetical protein BsubsN3_19372 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320792|ref|ZP_03602086.1| hypothetical protein BsubsJ_19325 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325078|ref|ZP_03606372.1| hypothetical protein BsubsS_19486 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81637750|sp|P96729|YWSB_BACSU RecName: Full=Cell wall-binding protein ywsB; Flags: Precursor
gi|1894756|emb|CAB07460.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2636122|emb|CAB15614.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
Length = 178
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 17/139 (12%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWIN 111
P+ ++ + A N R P L G ++++ +W +++ +G G+++
Sbjct: 46 PIDSYL-VSAEALNVRTKPSASSQKA-DTLHLGDSLKLISFSNADWAKVKYKNGKTGFVS 103
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSG---- 165
+ + +Y D +SI + V L + G
Sbjct: 104 --------THYIVKAATTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKGGFDF 155
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W F T G++K + +
Sbjct: 156 DWVFVDYGGTTGYMKTKDL 174
>gi|324327203|gb|ADY22463.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 591
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + +V + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGSGLEHHIV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|228986357|ref|ZP_04146494.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228773384|gb|EEM21813.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 576
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + +V + G +V+ W ++ G WI +
Sbjct: 335 VNGDGINVRSGSGLEHHIV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 383
>gi|229197386|ref|ZP_04324113.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1293]
gi|228586010|gb|EEK44101.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1293]
Length = 591
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + +V + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGSGLEHHIV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|197302166|ref|ZP_03167225.1| hypothetical protein RUMLAC_00892 [Ruminococcus lactaris ATCC
29176]
gi|197298597|gb|EDY33138.1| hypothetical protein RUMLAC_00892 [Ruminococcus lactaris ATCC
29176]
Length = 610
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 26/152 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI-----RDF-----DGTI 107
++ + N R ++ L G V VV + + ++ D+ +G
Sbjct: 104 ASVVRDKINERFYWDSNEQILLYTLPSG-NVSVVADTNEYTEVNEQKSVDYTILKMEGDK 162
Query: 108 GWINKSLL------------SGKRSAIVSPWNRKTNN--PIYINLYKKPDIQSIIVAKVE 153
+I + R I + W K + + ++S ++ V+
Sbjct: 163 VYIALPFIQTYTNMEYKVYQDPNRIVITTDWGEKETAVVKGDTQIRYQGGVKSPVLTDVK 222
Query: 154 PGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+T+ E +W G++K K+
Sbjct: 223 KNDKVTVLEDEDDWQKVATADGFIGYLKSSKL 254
>gi|206974719|ref|ZP_03235635.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus H3081.97]
gi|217960687|ref|YP_002339251.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH187]
gi|222096743|ref|YP_002530800.1| N-acetylmuramoyl-l-alanine amidase and s-layer protein fusion
[Bacillus cereus Q1]
gi|229139891|ref|ZP_04268456.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST26]
gi|206747362|gb|EDZ58753.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus H3081.97]
gi|217064794|gb|ACJ79044.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH187]
gi|221240801|gb|ACM13511.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus Q1]
gi|228643556|gb|EEK99822.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST26]
Length = 591
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + +V + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGSGLEHHIV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|94499325|ref|ZP_01305863.1| SH3 domain protein [Oceanobacter sp. RED65]
gi|94428957|gb|EAT13929.1| SH3 domain protein [Oceanobacter sp. RED65]
Length = 231
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAI 122
N R GP + ++ L G ++ ++E E+ + ++ G GW+ L K A
Sbjct: 42 INLRTGPSNEFRII-KTLKSGSHLQFIEESEDGKFTKVTTDQGLEGWVPTRFLQDKPIAF 100
>gi|165918258|ref|ZP_02218344.1| hypothetical protein COXBURSA334_2196 [Coxiella burnetii RSA 334]
gi|165918118|gb|EDR36722.1| hypothetical protein COXBURSA334_2196 [Coxiella burnetii RSA 334]
Length = 210
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--N 172
LSG S + + + +NLY+KP + I+ K+ P L W
Sbjct: 15 LSG--SITYATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPR 72
Query: 173 LDTEGWIKKQK 183
GW+ + +
Sbjct: 73 NGEVGWVNRDQ 83
>gi|16330213|ref|NP_440941.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|1652701|dbj|BAA17621.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
Length = 591
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ + + + +R GPG Y+ + T L +G V + +W ++ D+ GWI
Sbjct: 232 PQVIVVTSQTGVARTGPGTDYSRL-TPLPQGSQASVTGQDGDWLRL-DY---GGWIKA 284
>gi|317473797|ref|ZP_07933078.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316910054|gb|EFV31727.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 173
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---------YNL 173
++ + +N+ P + S IV K+ ++ + G+W F
Sbjct: 97 TISNTQRRVSANVLNVRSSPSVNSSIVGKLNYSDVVEVYGLHGDWAFVKYRYMDSYYKVN 156
Query: 174 DTEGWIKKQKI 184
EG++ + +
Sbjct: 157 TLEGYVSTKYL 167
>gi|313636782|gb|EFS02429.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL S4-171]
Length = 280
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ + W ++D +GWIN ++ + + K +Y P +
Sbjct: 162 KATTKQGTWYNLQDQGKQVGWINSKAVNIFYTPNNETNAKLDKYVTDSDQKIYALPVEDN 221
Query: 146 SIIVAKVE--PGVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V+ + G L I + W + D + GW K
Sbjct: 222 SRVVSALNDYKGKELDIDRRADVKNEYWYRVKSDDGKIIGWSKAS 266
>gi|313632280|gb|EFR99334.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL N1-067]
Length = 366
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ + W ++D +GWIN ++ + + K +Y P +
Sbjct: 248 KATTKQGTWYNLQDQGKQVGWINSKAVNIFYTPNNETNAKLDKYVTDSDQKIYALPVEDN 307
Query: 146 SIIVAKVE--PGVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V+ + G L I + W + D + GW K
Sbjct: 308 SRVVSALNDYKGKELDIDRRADVKNEYWYRVKSDDGKIIGWSKAS 352
>gi|289435544|ref|YP_003465416.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171788|emb|CBH28334.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 374
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYKKP-DIQ 145
+ + W ++D +GWIN ++ + + K +Y P +
Sbjct: 256 KATTKQGTWYNLQDQGKQVGWINSKAVNIFYTPNNETNAKLDKYVTDSDQKIYALPVEDN 315
Query: 146 SIIVAKVE--PGVLLTIREC----SGEWCFGYNLDTE--GWIKKQ 182
S +V+ + G L I + W + D + GW K
Sbjct: 316 SRVVSALNDYKGKELDIDRRADVKNEYWYRVKSDDGKIIGWSKAS 360
>gi|63055059|ref|NP_001017995.1| SH3 and PX domain-containing protein 2B [Homo sapiens]
gi|229463023|sp|A1X283|SPD2B_HUMAN RecName: Full=SH3 and PX domain-containing protein 2B; AltName:
Full=Adapter protein HOFI; AltName: Full=Factor for
adipocyte differentiation 49; AltName: Full=Tyrosine
kinase substrate with four SH3 domains
gi|162317618|gb|AAI56243.1| SH3 and PX domains 2B [synthetic construct]
gi|162318770|gb|AAI57117.1| SH3 and PX domains 2B [synthetic construct]
gi|211925507|dbj|BAG81977.1| FAD49 [Homo sapiens]
Length = 911
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|294673504|ref|YP_003574120.1| BatD/BatE protein [Prevotella ruminicola 23]
gi|294473760|gb|ADE83149.1| putative BatD/BatE protein [Prevotella ruminicola 23]
Length = 853
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++Y R ++ K+ I L ++ + ++ ++ + + + A
Sbjct: 748 LVYLFSARVWVQKLGFFGGIALLVVFVFSNFFAWQQRQQLLYRQGAI-----VIAPSVAV 802
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKS 113
+ P L +G V + +NWR++R DG GW+
Sbjct: 803 KSTPAQN-GTDLFILHEGTKVVITDSSMKNWREVRLADGKKGWLESK 848
>gi|325678419|ref|ZP_08158039.1| SH3 domain protein [Ruminococcus albus 8]
gi|324109920|gb|EGC04116.1| SH3 domain protein [Ruminococcus albus 8]
Length = 322
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
++L K PD S ++ ++ + + C+ + W + + G+ + G P
Sbjct: 106 AEPVSLRKTPDKSSEVLEVIDADERVVVDGCTDDGVWYSVRHGEVTGFAAAENFTGKSP 164
>gi|159027723|emb|CAO89592.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 598
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
E I + LP I A +R GPG Y+ + T L +G V + +W ++ D
Sbjct: 226 QGEINIISDQNLPVIEIIAAQGV-ARTGPGSDYSRL-TPLPQGTKARVTGKEGDWLRL-D 282
Query: 103 FDGTIGWINKS 113
+ GWI +
Sbjct: 283 Y---GGWILER 290
>gi|74132096|gb|AAZ99795.1| adaptor protein HOFI [Homo sapiens]
Length = 911
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 233
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 234 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|332828713|gb|EGK01405.1| hypothetical protein HMPREF9455_02238 [Dysgonomonas gadei ATCC
BAA-286]
Length = 274
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 4/107 (3%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
L +Y+ I +A+ + + +K E + I A A+
Sbjct: 169 LSVFFFSRYVSMKKTAFYIGIVALVIVILANVFSFGQKNKIEHRDT---AVIMAGSASVV 225
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
P I + L G V + KE NW +I +G++GWI + L
Sbjct: 226 SSPDINSKELFI-LHSGTKVYITKEDRNWLEIEIDNGSVGWIQRDKL 271
>gi|229061277|ref|ZP_04198626.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH603]
gi|228718002|gb|EEL69644.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH603]
Length = 329
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 10/74 (13%)
Query: 42 LSHEKEIFEKKPLPRFVT-----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+S ++ + +P VT I+ N R GPG Y+ + L K V E +
Sbjct: 171 VSVPEKPSKPVEVPTAVTDGIAIIEGDNVNLRKGPGTSYSKI-RQLNKPETYIVWGEKDG 229
Query: 97 WRQIRDFDGTIGWI 110
W + G WI
Sbjct: 230 WLNL----GGEQWI 239
>gi|37523573|ref|NP_926950.1| hypothetical protein gll4004 [Gloeobacter violaceus PCC 7421]
gi|35214578|dbj|BAC91945.1| gll4004 [Gloeobacter violaceus PCC 7421]
Length = 313
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG--YNLDTEGWIK--KQKIW 185
+L +PD S +V++ PG L + SG+ W GWI + +W
Sbjct: 63 TDLRAEPDAGSELVSQALPGDTLKVLARSGDGRWYQILREWDGYVGWIPAERAVLW 118
>gi|302669641|ref|YP_003829601.1| chitinase Chi18A [Butyrivibrio proteoclasticus B316]
gi|302394114|gb|ADL33019.1| chitinase Chi18A [Butyrivibrio proteoclasticus B316]
Length = 567
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+I R+ G+ ++ L KG V V++E ENW +++ D IG++ LS
Sbjct: 172 ASINKDT-QLRLRGGVKSEIL-IDLAKGDTVTVLEELENWTKVKSSDSYIGYVENKRLSD 229
Query: 118 KRS 120
+
Sbjct: 230 ITT 232
>gi|296328017|ref|ZP_06870552.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154973|gb|EFG95755.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 400
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 57 FVTIKASRANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKS 113
++ IKA +N R P + TY +K +E +K N W +D +G G+I S
Sbjct: 68 YIFIKARVSNLREKPDPDSQIVGKYTYDSKLKLLEKIKYQGNLWYLAQDQNGVKGYIAAS 127
Query: 114 LLSGKR 119
+
Sbjct: 128 QTEKRN 133
>gi|163798185|ref|ZP_02192119.1| hypothetical protein BAL199_00165 [alpha proteobacterium BAL199]
gi|159176522|gb|EDP61102.1| hypothetical protein BAL199_00165 [alpha proteobacterium BAL199]
Length = 766
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKV--EPGVLLTIRECSGEWCFGYNLDTEGWIK 180
V + NL +P + + E V T + G W + W+
Sbjct: 354 VVDLDDSYVTVKTANLRAEPSTDAAKAGTLPAETLVQATAKLADGSWVRVAHAGGTAWVW 413
Query: 181 KQKIWGIYPGE 191
+ + GE
Sbjct: 414 APLVAPVDAGE 424
>gi|153206882|ref|ZP_01945700.1| hypothetical protein A35_A2155 [Coxiella burnetii 'MSU Goat Q177']
gi|212219537|ref|YP_002306324.1| hypothetical protein CbuK_2081 [Coxiella burnetii CbuK_Q154]
gi|120576955|gb|EAX33579.1| hypothetical protein A35_A2155 [Coxiella burnetii 'MSU Goat Q177']
gi|212013799|gb|ACJ21179.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 210
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--N 172
LSG S + + + +NLY+KP + I+ K+ P L W
Sbjct: 15 LSG--SITYATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPR 72
Query: 173 LDTEGWIKKQK 183
GW+ + +
Sbjct: 73 NGEVGWVNRDQ 83
>gi|148977032|ref|ZP_01813678.1| SH3 domain protein [Vibrionales bacterium SWAT-3]
gi|145963692|gb|EDK28953.1| SH3 domain protein [Vibrionales bacterium SWAT-3]
Length = 223
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 19/110 (17%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDF----DG---TIGWINKSLLSGKRSAIVSPWNRKTNNP 133
YL KG VEV+++ +W +I D+ +G T W++ S LS I N++ +
Sbjct: 88 YLYKGEKVEVLEKQGDWGRISDYIVLKEGGSQTAEWVSMSGLSNDEVIISEKENKEILDS 147
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTI---RECSGEWCFGYNLDTEGWIK 180
+ + + + + EC + GW+K
Sbjct: 148 YLVK-----SDDLKLYKETFRNSVAKLISEGECEPS----DFEELGGWVK 188
>gi|226227482|ref|YP_002761588.1| hypothetical protein GAU_2076 [Gemmatimonas aurantiaca T-27]
gi|226090673|dbj|BAH39118.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 237
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 21/69 (30%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S+++ + S ++N+ +V ++P + W
Sbjct: 155 SSMVANGLTTADSIQWTPAVARTWVNVRSDASRGGEVVGVIKPASRAMLGTDRAGWRQVR 214
Query: 172 NLDTEGWIK 180
D GW+
Sbjct: 215 LSDVTGWVD 223
>gi|121998667|ref|YP_001003454.1| hypothetical protein Hhal_1888 [Halorhodospira halophila SL1]
gi|121590072|gb|ABM62652.1| protein of unknown function DUF1058 [Halorhodospira halophila SL1]
Length = 160
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+Y + + + +V +V G L G W + EGW+ +
Sbjct: 35 EVYAEASLDAEVVRRVPRGTELEQLASEGVWYRVRHDGEEGWVSR 79
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ +G +E + W ++R DG GW+++ +++ +
Sbjct: 50 VPRGTELEQLASEGVWYRVR-HDGEEGWVSRLVVATQP 86
>gi|297156636|gb|ADI06348.1| hypothetical protein SBI_03227 [Streptomyces bingchenggensis BCW-1]
Length = 89
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 62 ASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWR--QIR--DFDGTIGWINKSLLS 116
+ N R GPG YT + Y E + W ++ G GW+ SLL+
Sbjct: 27 SEAVNLRSGPGTSYTSLGVLYKGTDFT-EYCTKDYKWSYGKVTSGANKGKKGWVKYSLLN 85
>gi|260582188|ref|ZP_05849982.1| SH3 domain-containing protein [Haemophilus influenzae NT127]
gi|260094820|gb|EEW78714.1| SH3 domain-containing protein [Haemophilus influenzae NT127]
Length = 203
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G G + + + + G V V++ + IRD WI S LS S+
Sbjct: 36 LRRGAGEQFKIAGS-IQAGEAVNVLERQGKYTLIRDNKNRAAWILNSDLSSTPSS 89
>gi|255034309|ref|YP_003084930.1| SH3 type 3 domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254947065|gb|ACT91765.1| SH3 type 3 domain protein [Dyadobacter fermentans DSM 18053]
Length = 127
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
R++ I + R GPG + V+ + + G + + W ++ D +G
Sbjct: 64 RYIVIARNGLRLREGPGTQFEVIGS-MRPGQVIFATITIDGWARV-DVEGDG 113
>gi|225017831|ref|ZP_03707023.1| hypothetical protein CLOSTMETH_01765 [Clostridium methylpentosum
DSM 5476]
gi|224949343|gb|EEG30552.1| hypothetical protein CLOSTMETH_01765 [Clostridium methylpentosum
DSM 5476]
Length = 60
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 136 INLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + +PD + I+ + G L+ I E G+W D G+
Sbjct: 1 MRVRTQPDTSDSANIIRLLNAGNLVDILERRGDWLAVRAGDHIGYAHAS 49
>gi|16799489|ref|NP_469757.1| hypothetical protein lin0412 [Listeria innocua Clip11262]
gi|16412841|emb|CAC95645.1| lin0412 [Listeria innocua Clip11262]
Length = 227
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 7/97 (7%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + F L +L L + + N R V+
Sbjct: 5 AARRKIFFALIALMISFSVLFLPTNSASAATT----YKMTTTADVNVRTADNTSGKVIGF 60
Query: 81 YLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLLS 116
Y KG V + NW + ++G +G+++ L+
Sbjct: 61 Y-KKGTTVTFTAKTKNNWYKTT-YNGKVGYVSGKCLT 95
>gi|330503194|ref|YP_004380063.1| hypothetical protein MDS_2280 [Pseudomonas mendocina NK-01]
gi|328917480|gb|AEB58311.1| hypothetical protein MDS_2280 [Pseudomonas mendocina NK-01]
Length = 267
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQKIWGI 187
L+++PD S A + G + + + W +G W+ + +G+
Sbjct: 214 LHQRPDEASRTRAYLIEGDVCEVLDQQQNWLLIRYASRKGPLERWVSLDEAYGL 267
>gi|317054838|ref|YP_004103305.1| cell wall hydrolase SleB [Ruminococcus albus 7]
gi|315447107|gb|ADU20671.1| cell wall hydrolase SleB [Ruminococcus albus 7]
Length = 364
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+NL +P + + ++ + + C+ + W + + +G+ + G P
Sbjct: 158 VNLRAEPSKSAEALEVLDTDTRVVVDGCTDDGVWYSVRHGEIKGYAMAEYFTGKKPD 214
>gi|126733287|ref|ZP_01749034.1| hypothetical protein RCCS2_04009 [Roseobacter sp. CCS2]
gi|126716153|gb|EBA13017.1| hypothetical protein RCCS2_04009 [Roseobacter sp. CCS2]
Length = 203
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 22/74 (29%), Gaps = 4/74 (5%)
Query: 109 WINKSLLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVE---PGVLLTIRECS 164
W + + + + +N+ P+ + ++ + V +
Sbjct: 12 WAHATYADQTDPPLPALYAVTGVAADDVLNVRAAPNGSAAVIGTLAHDAKDVEVVTLSRE 71
Query: 165 GEWCFGYNLDTEGW 178
G W ++ GW
Sbjct: 72 GRWARVNTGESAGW 85
>gi|295697029|ref|YP_003590267.1| NLP/P60 protein [Bacillus tusciae DSM 2912]
gi|295412631|gb|ADG07123.1| NLP/P60 protein [Bacillus tusciae DSM 2912]
Length = 291
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 9/86 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ +A + P+ +V+ R P V L G
Sbjct: 207 AAPVTDSPGSTVASAPSGATDRVTPVKGWVS-------VRSAPSTSAPKVAV-LHLGESA 258
Query: 89 EVVKEYENW-RQIRDFDGTIGWINKS 113
E + +W ++R DGT+G++ S
Sbjct: 259 ERLATVNDWWYKVRLSDGTVGYLTSS 284
>gi|91762657|ref|ZP_01264622.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718459|gb|EAS85109.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 248
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
N+YKKP+ S + +++ G I + W + G+IK
Sbjct: 8 KKPLSNIYKKPNAFSEVTSQILYGEKFKIISKNKNWIKIKVSFDNYTGYIK 58
>gi|71082919|ref|YP_265638.1| hypothetical protein SAR11_0214 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062032|gb|AAZ21035.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
N+YKKP+ S + +++ G I + W + G+IK
Sbjct: 8 KKPLSNIYKKPNAFSEVTSQILYGEKFKIISKNKNWIKIKVSFDNYTGYIK 58
>gi|78224507|ref|YP_386254.1| putative lipoprotein [Geobacter metallireducens GS-15]
gi|78195762|gb|ABB33529.1| lipoprotein, putative [Geobacter metallireducens GS-15]
Length = 148
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY- 171
S + I + T Y+N+ +P VA + G + + G W
Sbjct: 68 PQASVTVTTIPLVPGKITPRQKYVNVRPEPSTGKKPVAVLSGGKYVEVLGREGTWVKIRW 127
Query: 172 ---NLDTEGWIKKQKIWGIYP 189
EGW+ + + + P
Sbjct: 128 TRGKKAHEGWVAGKFVDTVTP 148
>gi|240851040|ref|YP_002972440.1| SH3-domain protein [Bartonella grahamii as4aup]
gi|240268163|gb|ACS51751.1| SH3-domain protein [Bartonella grahamii as4aup]
Length = 210
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 13/135 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K ++ + A+ + A E + + + + R GP Y
Sbjct: 1 MLRKKFLSTTMILWALGASGVAVTASHAEAGTIAGTV----ARVASGQVSLRTGPATAYK 56
Query: 77 VVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
V+ T + G V++ N W + + G +GW + ++ P T P+
Sbjct: 57 VI-TMVPMGAKVQIYGCLSNKTWCSL-GYHGKVGWASARYVNVNN----VPTVAFTKMPV 110
Query: 135 YIN-LYKKPDIQSII 148
N + K P ++ ++
Sbjct: 111 KPNAMRKSPKVKQVV 125
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
++L P ++ V G + I C + WC GW
Sbjct: 32 TIAGTVARVASGQVSLRTGPATAYKVITMVPMGAKVQIYGCLSNKTWCSLGYHGKVGWAS 91
Query: 181 KQKI 184
+ +
Sbjct: 92 ARYV 95
>gi|229014440|ref|ZP_04171558.1| Teichoic acids export ATP-binding protein tagH [Bacillus mycoides
DSM 2048]
gi|228746790|gb|EEL96675.1| Teichoic acids export ATP-binding protein tagH [Bacillus mycoides
DSM 2048]
Length = 542
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE------NWRQIRDFDGTIGW 109
R+V +++ R P + VV T ++ G P V ++ + NW + +G GW
Sbjct: 344 RYV--NSAKGRVRGTPTLDGQVVGT-ISFGTPFVVKEQQKEMGSDINWLKFTLGNGEEGW 400
Query: 110 INKSLLSGKRSAIVSPWN 127
I++S++ P+
Sbjct: 401 ISESIVKSIPYNQTIPYE 418
>gi|218131122|ref|ZP_03459926.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697]
gi|317477000|ref|ZP_07936242.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
gi|217986642|gb|EEC52976.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697]
gi|316906793|gb|EFV28505.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
Length = 281
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 2/109 (1%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L S L +I+ F I F +L+ E + I +
Sbjct: 171 LLISFSLFFLFKQIVWKKSGFIAGIVFLFLVVLSNIFASEQKSELVNRNKAIILSPSVTV 230
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
R P L +G +EV W++IR DG +GW+ S +
Sbjct: 231 RSTPS-ESGTSLFILHEGHKIEVKDNSMREWKEIRLEDGKVGWVPTSAI 278
>gi|158423850|ref|YP_001525142.1| hypothetical protein AZC_2226 [Azorhizobium caulinodans ORS 571]
gi|158330739|dbj|BAF88224.1| unknown protein [Azorhizobium caulinodans ORS 571]
Length = 165
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ V ++ G + + C+ WC + ++ +
Sbjct: 30 AKRNATVRGGPYTKAPPVGQITNGAPVEVLGCASGWCQLAWPG-QAYVPANCV 81
>gi|229100513|ref|ZP_04231368.1| S-layer y domain ribonuclease [Bacillus cereus Rock3-29]
gi|228682895|gb|EEL36918.1| S-layer y domain ribonuclease [Bacillus cereus Rock3-29]
Length = 946
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW--INKSL 114
++T++++ P + + G +EV+ + W Q++ + G IG+ + +S+
Sbjct: 133 WITLRSTVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVK-YQGEIGYVRVLESV 191
Query: 115 L---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII----VAKVEPGVLLTIRECSGEW 167
+ S RS V+ ++ + +K P+ + + +W
Sbjct: 192 VIGESPVRSWDVTKEATNLSHFMITEYHKDPEKYFPPNIQKKFDKQLDSDAALLANGLKW 251
Query: 168 C-----FGYNLDTEGWIKKQKIW 185
Y + +GW+++ W
Sbjct: 252 IDQLKEALYLDNQKGWVQEAGKW 274
>gi|157693984|ref|YP_001488446.1| beta-N-acetylhexosaminidase [Bacillus pumilus SAFR-032]
gi|157682742|gb|ABV63886.1| beta-N-acetylhexosaminidase [Bacillus pumilus SAFR-032]
Length = 876
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 23/120 (19%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A+ + GP + + V + ++ ++ + S
Sbjct: 576 TATAVKIKNGP--------MVMQTNYNLTVNEMVNKQMKVSPQTDGAAYVYAPYVDAATS 627
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ N +N+ PD S IVA++ G + G W GW
Sbjct: 628 TV---------NTDGLNVRSTPDSSSASNIVAQLNKGAKVKQLGKEGNWIKISL----GW 674
>gi|314967149|gb|EFT11248.1| NlpC/P60 family protein [Propionibacterium acnes HL082PA2]
gi|315093871|gb|EFT65847.1| NlpC/P60 family protein [Propionibacterium acnes HL060PA1]
gi|327325816|gb|EGE67608.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL103PA1]
Length = 388
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS--- 116
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 117 GKRSAIVSPWNRKTNNP---IYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
K S +P + + +NL + + + V G L + W +
Sbjct: 179 AKPSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|166368835|ref|YP_001661108.1| N-acetylmuramoyl-L-alanine amidase [Microcystis aeruginosa
NIES-843]
gi|166091208|dbj|BAG05916.1| N-acetylmuramoyl-L-alanine amidase [Microcystis aeruginosa
NIES-843]
Length = 598
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
E I + LP I A +R GPG Y+ + T L +G V + +W ++ D
Sbjct: 226 QGEINIISDQNLPVIEIIVAEGV-ARTGPGSDYSRL-TPLPQGTKARVTGKEGDWLRL-D 282
Query: 103 FDGTIGWINKS 113
+ GWI +
Sbjct: 283 Y---GGWILER 290
>gi|255065364|ref|ZP_05317219.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
gi|255050189|gb|EET45653.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
Length = 244
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 136 INLYKKPDIQSIIVAKVEPG----VLLTIRECS----GEWCFGYNLDTEGWIKKQKI 184
+NL P I ++ V +++ G V+ C+ G W G++ +
Sbjct: 176 LNLRGGPSISAVSVTQLKDGQQLQVVAETNACTNANGGCWVKVQVGGLTGYVSNAYL 232
>gi|282898422|ref|ZP_06306413.1| Cell wall hydrolase/autolysin [Raphidiopsis brookii D9]
gi|281196953|gb|EFA71858.1| Cell wall hydrolase/autolysin [Raphidiopsis brookii D9]
Length = 543
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R GP Y+ T L KG V + + +W ++ D+ W+N+
Sbjct: 224 RTGPSTDYS-RMTPLPKGTRVMITGQEGDWFRL-DY---GAWVNRK 264
>gi|154484566|ref|ZP_02027014.1| hypothetical protein EUBVEN_02280 [Eubacterium ventriosum ATCC
27560]
gi|149734414|gb|EDM50331.1| hypothetical protein EUBVEN_02280 [Eubacterium ventriosum ATCC
27560]
Length = 451
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 27/56 (48%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ + +Y+K D +S +V G + I + ++ + G++KK+ +
Sbjct: 89 EDDSDEMVEIYEKDDEKSKVVGIGVDGSYVKILKKGKKFYQIKSKKITGYVKKENV 144
>gi|329954842|ref|ZP_08295859.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328526946|gb|EGF53957.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 280
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
F I F + +L+ E + I + R P T + L +G
Sbjct: 190 FIAGIVFLIFVVLSNVFASEQKTELMNRNNAIILSPSVTVRSTPSESGTSLFV-LHEGHK 248
Query: 88 VEVVK-EYENWRQIRDFDGTIGWINKSLL 115
+E+ W++IR DG +GW+ S +
Sbjct: 249 IEIKDNSMREWKEIRLEDGKVGWVPASAI 277
>gi|282855301|ref|ZP_06264633.1| NlpC/P60 family protein [Propionibacterium acnes J139]
gi|282581889|gb|EFB87274.1| NlpC/P60 family protein [Propionibacterium acnes J139]
gi|314983043|gb|EFT27135.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA3]
gi|315091615|gb|EFT63591.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA4]
Length = 388
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS--- 116
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 117 GKRSAIVSPWNRKTNNP---IYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
K S +P + + +NL + + + V G L + W +
Sbjct: 179 AKPSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|298290160|ref|YP_003692099.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296926671|gb|ADH87480.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 224
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+NL P V V G +T C WC GW+ I +Y G
Sbjct: 31 VNLRAGPSTVYPAVTVVPTGAAITTFGCVSGYSWCDIGFGPYRGWVAASYIQVVYRG 87
>gi|168178483|ref|ZP_02613147.1| bacteriocin [Clostridium botulinum NCTC 2916]
gi|226948341|ref|YP_002803432.1| bacteriocin [Clostridium botulinum A2 str. Kyoto]
gi|182670545|gb|EDT82519.1| bacteriocin [Clostridium botulinum NCTC 2916]
gi|226843365|gb|ACO86031.1| bacteriocin [Clostridium botulinum A2 str. Kyoto]
Length = 117
Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF-------EKKPLPRFVTI---- 60
+ +K + ++ ++ T ++ F A + + E P+ R +
Sbjct: 1 MKSKKILSLVMSLCVLGTSSMLFTSNVKAATNDKVVPVVTTNKGEETPPIQRIAGVVRVT 60
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSL 114
S AN R GPG Y+ V T G ++ + W +I + G WI+ S+
Sbjct: 61 AKSGANVRSGPGTNYSKVGT-ANYGAELQYAGQSKNGWYKIM-YRGGYAWISSSV 113
>gi|119581839|gb|EAW61435.1| SH3 and PX domains 2B, isoform CRA_e [Homo sapiens]
Length = 292
Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 38 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 95
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 96 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 137
>gi|314924023|gb|EFS87854.1| NlpC/P60 family protein [Propionibacterium acnes HL001PA1]
Length = 388
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS--- 116
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 117 GKRSAIVSPWNRKTNNP---IYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
K S +P + + +NL + + + V G L + W +
Sbjct: 179 AKPSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|119581837|gb|EAW61433.1| SH3 and PX domains 2B, isoform CRA_c [Homo sapiens]
Length = 773
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 38 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 95
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 96 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 137
>gi|121607248|ref|YP_995055.1| type II and III secretion system protein [Verminephrobacter
eiseniae EF01-2]
gi|121551888|gb|ABM56037.1| type II and III secretion system protein [Verminephrobacter
eiseniae EF01-2]
Length = 714
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIW 185
+ L PDI + ++ ++ G LL + ++ GW++ Q ++
Sbjct: 659 ALALRVAPDINAPVLQRLAQGSLLEVLPQAPQAQFSAVQVDGRRGWVETQWLF 711
>gi|303242294|ref|ZP_07328780.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
gi|302590133|gb|EFL59895.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
Length = 4812
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 15/80 (18%)
Query: 60 IKASRANSRIGPGIM---YTVVCTY---LTKGLPVEVVKEYEN---------WRQIRDFD 104
+ AS N R P Y L++G V++ N W +++ +
Sbjct: 2239 VTASTLNFRQAPPNKEEVYPTDWDVICGLSEGTIVDLTDNMYNIMRWSNGSEWYEVKTLN 2298
Query: 105 GTIGWINKSLLSGKRSAIVS 124
GW++K LS ++
Sbjct: 2299 NKTGWVSKRYLSEVPGVQIT 2318
>gi|229190948|ref|ZP_04317939.1| Polysugar degrading enzyme [Bacillus cereus ATCC 10876]
gi|228592616|gb|EEK50444.1| Polysugar degrading enzyme [Bacillus cereus ATCC 10876]
Length = 333
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + W ++ R+ +G GWI + L+ + A +
Sbjct: 89 GQEVTVIDKKGEWVKVLVHGQPTPRNEEGYPGWIPEKQLTYNQEFADKTNEPFVLITKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + WI+K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWIRKN 195
>gi|322806114|emb|CBZ03682.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 115
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
WIN L GK I N P + + +K S I+ + G + +
Sbjct: 45 NNNSWIN---LDGKTGTI--------NTPSGVFIREKKSTSSRILGALPNGSKVQLYRKE 93
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + I
Sbjct: 94 GDWMHIYYPPHGGYVYAKYI 113
>gi|319781999|ref|YP_004141475.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167887|gb|ADV11425.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 280
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLD--- 174
+V + + + + A++ G ++T C+ +WC +
Sbjct: 22 LVISVVTGLAPDDLLKVRTTASPVATVEARLSSGDMVTNLGCNDINGYKWCKVESTGKEK 81
Query: 175 TEGWIKKQKI 184
GW + +
Sbjct: 82 LSGWAPARYL 91
>gi|307637921|gb|ADN80371.1| hypothetical protein hp908_1249 [Helicobacter pylori 908]
Length = 68
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
KKPL V + S N R P I ++ + L K V+V++ +W +I T G++
Sbjct: 3 KKPLEYKVAV--SGVNVRAFPSIKGKIIGSLL-KDKSVKVLEIQNDWAEIEFSHETKGYV 59
Query: 111 NKSLLSG 117
LL
Sbjct: 60 FLKLLKK 66
>gi|302384771|ref|YP_003820593.1| glycoside hydrolase family 18 [Clostridium saccharolyticum WM1]
gi|302195399|gb|ADL02970.1| glycoside hydrolase family 18 [Clostridium saccharolyticum WM1]
Length = 553
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + + N R+ G+ +V T+++ G + V++ E W ++R DG +G++ + L
Sbjct: 165 VVSQKGNVRVKGGVKSPIV-TWISPGSQLTVLESMEKWDKVRTQDGFVGYVERKRLGEVT 223
Query: 120 SAI 122
S +
Sbjct: 224 SEV 226
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYI--NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
KR I + W+ + + N+ K ++S IV + PG LT+ E +W
Sbjct: 150 KRVFINNNWDAQKKAVVSQKGNVRVKGGVKSPIVTWISPGSQLTVLESMEKWDKVRTQDG 209
Query: 175 TEGWIKKQKI 184
G+++++++
Sbjct: 210 FVGYVERKRL 219
>gi|295092479|emb|CBK78586.1| Predicted glycosyl hydrolase [Clostridium cf. saccharolyticum K10]
Length = 568
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R R+ + ++ G V V++ + W +I DG IG++ L RS +
Sbjct: 168 GRVKVRVEADVKSPILTECYR-GDSVTVLETTDEWVKIATADGHIGYVKNRKLKNLRSVV 226
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLD 174
KR I + W+ + + + + D++S I+ + G +T+ E + EW
Sbjct: 150 KRVFIENDWDGTPTADVRGRVKVRVEADVKSPILTECYRGDSVTVLETTDEWVKIATADG 209
Query: 175 TEGWIKKQKI 184
G++K +K+
Sbjct: 210 HIGYVKNRKL 219
>gi|229156886|ref|ZP_04284967.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 4342]
gi|228626376|gb|EEK83122.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 4342]
Length = 591
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ N R G G+ + +V + G +V+ W ++ G WI +
Sbjct: 350 VNGDGINVRSGSGLEHYIV-RKASNGDRYKVLAVKNGWYKV----GNDEWIFYN 398
>gi|283796644|ref|ZP_06345797.1| putative variant SH3 domain protein [Clostridium sp. M62/1]
gi|291076067|gb|EFE13431.1| putative variant SH3 domain protein [Clostridium sp. M62/1]
Length = 568
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
R R+ + ++ G V V++ + W +I DG IG++ L RS +
Sbjct: 168 GRVKVRVEADVKSPILTECYR-GDSVTVLETTDEWVKIATADGHIGYVKNRKLKNLRSVV 226
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLD 174
KR I + W+ + + + + D++S I+ + G +T+ E + EW
Sbjct: 150 KRVFIENDWDGTPTADVRGRVKVRVEADVKSPILTECYRGDSVTVLETTDEWVKIATADG 209
Query: 175 TEGWIKKQKI 184
G++K +K+
Sbjct: 210 HIGYVKNRKL 219
>gi|118477889|ref|YP_895040.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|225864461|ref|YP_002749839.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
gi|118417114|gb|ABK85533.1| possible N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis
str. Al Hakam]
gi|225789104|gb|ACO29321.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
Length = 172
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI----NKSLLSGKRS 120
N R GPG Y+ + L K V E + W + G W+ + LS K +
Sbjct: 41 VNLRKGPGTSYSKI-RQLNKPESYVVWAEKDGWLNL----GDEQWVKDDPSYVKLSKKST 95
Query: 121 A-IVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
R + + Y P ++ VA
Sbjct: 96 VDSSIVGKRVVSKVNNLRFYDAPSWRNKDVA 126
>gi|321313141|ref|YP_004205428.1| hypothetical protein BSn5_08905 [Bacillus subtilis BSn5]
gi|320019415|gb|ADV94401.1| hypothetical protein BSn5_08905 [Bacillus subtilis BSn5]
Length = 178
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 17/139 (12%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWIN 111
P+ ++ + A N R P L G ++++ +W +++ +G G+++
Sbjct: 46 PIDSYL-VSAEALNVRTKPSASSQKA-DTLHLGDSLKLISFSNADWAKVKYKNGKTGFVS 103
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSG---- 165
+ + +Y D +SI + V L + G
Sbjct: 104 --------THYIVKAATTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKGGFDF 155
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W F G++K + +
Sbjct: 156 DWVFVDYGGATGYMKTKDL 174
>gi|255531389|ref|YP_003091761.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
gi|255344373|gb|ACU03699.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
Length = 257
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
A+ + GP + G V + W + +G GWI S +
Sbjct: 205 ADVKSGPDAKQKTLFVIHA-GTKVSIKANNNGWINVVLSNGNSGWIAASDV 254
>gi|220679247|emb|CAX14383.1| novel protein (zgc:64011) [Danio rerio]
Length = 628
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYINLYK 140
KG V+V+ + W ++++ G++ +++L G+R P + P +++
Sbjct: 500 KGDMVQVIDKSGQWWKVKNSRNEEGYVPQNVLEPVDGER-----PPQQNMRGPPSLDMKS 554
Query: 141 KPDI 144
+P+
Sbjct: 555 RPEE 558
>gi|119581838|gb|EAW61434.1| SH3 and PX domains 2B, isoform CRA_d [Homo sapiens]
Length = 770
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 35 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 92
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 93 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 134
>gi|146305149|ref|YP_001185614.1| glycoside hydrolase family protein [Pseudomonas mendocina ymp]
gi|145573350|gb|ABP82882.1| glycoside hydrolase, family 19 [Pseudomonas mendocina ymp]
Length = 1054
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 103 FDGTIGWINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
GT GW+ ++ L+ A + T + + + ++ I+ + G L +
Sbjct: 252 PAGTEGWVYEAELTDNTVADKATDTESELTLSHQGVRVRREGKGNGTIIGVLPRGATLKV 311
Query: 161 RE-CSGEWCFG-YNLDTEG 177
E +C +D G
Sbjct: 312 GEKQRSGYCKVLEVMDYRG 330
>gi|229184708|ref|ZP_04311908.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
gi|228598812|gb|EEK56432.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
Length = 152
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI----NKSLLSGKRS 120
N R GPG Y+ + L K V E + W + G W+ + LS K +
Sbjct: 21 VNLRKGPGTSYSKI-RQLNKPESYVVWAEKDGWLNL----GDEQWVKDDPSYVKLSKKST 75
Query: 121 A-IVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
R + + Y P ++ VA
Sbjct: 76 VDSSIVGKRVVSKVNNLRFYDAPSWRNKDVA 106
>gi|188532577|ref|YP_001906374.1| putative signal transduction protein [Erwinia tasmaniensis Et1/99]
gi|188027619|emb|CAO95469.1| Conserved hypothetical protein YgiM [Erwinia tasmaniensis Et1/99]
Length = 206
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRS 120
R GPG Y +V T L G VE+++ +N + QIRD G W+ + LS S
Sbjct: 37 RSGPGNDYRLVGT-LNAGEEVELLQTNDNTKYGQIRDKQGRTTWLPLAQLSEIPS 90
>gi|310826211|ref|YP_003958568.1| hypothetical protein ELI_0589 [Eubacterium limosum KIST612]
gi|308737945|gb|ADO35605.1| hypothetical protein ELI_0589 [Eubacterium limosum KIST612]
Length = 484
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWI 179
+ + K +++ + S ++ + PG + C W + ++
Sbjct: 194 VEIKAADEKVWATDTVHVRESYTTDSNVLGDLAPGNEITRTGVCENGWSRVNYNGKDAFV 253
Query: 180 KKQKI 184
Q +
Sbjct: 254 YSQYL 258
>gi|154505658|ref|ZP_02042396.1| hypothetical protein RUMGNA_03197 [Ruminococcus gnavus ATCC 29149]
gi|153794097|gb|EDN76517.1| hypothetical protein RUMGNA_03197 [Ruminococcus gnavus ATCC 29149]
Length = 645
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R G+ ++ T + K V V+++ + W+++R DG IG++ + L
Sbjct: 242 VRFQGGVKSPIL-TEVKKSEKVTVIEDEDGWKKVRTSDGFIGYVQTNSL 289
>gi|327404410|ref|YP_004345248.1| NLP/P60 protein [Fluviicola taffensis DSM 16823]
gi|327319918|gb|AEA44410.1| NLP/P60 protein [Fluviicola taffensis DSM 16823]
Length = 251
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF-DGTIGWINKSLLSGKR 119
KAS A R +V L G VE+ + +NW +IR F DG GW++ L R
Sbjct: 9 KASIAPVRAEASDRSELVTQLLF-GELVEITEVQDNWLKIRSFMDGYEGWMDPKQLQDLR 67
>gi|119581835|gb|EAW61431.1| SH3 and PX domains 2B, isoform CRA_a [Homo sapiens]
Length = 289
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 35 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 92
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 93 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 134
>gi|238855766|ref|ZP_04646060.1| gametolysin [Lactobacillus jensenii 269-3]
gi|282933840|ref|ZP_06339189.1| putative N-acetylmuramidase [Lactobacillus jensenii 208-1]
gi|238831610|gb|EEQ23953.1| gametolysin [Lactobacillus jensenii 269-3]
gi|281302050|gb|EFA94303.1| putative N-acetylmuramidase [Lactobacillus jensenii 208-1]
Length = 453
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 16/91 (17%)
Query: 108 GWINKSLLSGKRS----AIVSPWNRKTNNPIYINLYKKP-----DIQSIIVAKVEPG--- 155
GWIN SLL+G + + N +Y + S +V ++ G
Sbjct: 255 GWINGSLLTGSSTQATTTEKAGTTTDAGNAAIKVVYTSAIAEWKNPGSGVVGYLQKGTTQ 314
Query: 156 -VLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
V+ I+ W + + W+ + ++
Sbjct: 315 TVVGKIQVNGAWWYKLSSGN---WVPGEYVY 342
>gi|260464040|ref|ZP_05812235.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259030211|gb|EEW31492.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 297
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLD--TEGWIKKQKI 184
+N+ KP A++ G + C+ WC + + GW + +
Sbjct: 46 DDLLNIRAKPSPIGKTEARLAGGASVRNLGCNDIDGHPWCKVESDNPKATGWAPARYL 103
>gi|254507476|ref|ZP_05119610.1| SH3 domain protein [Vibrio parahaemolyticus 16]
gi|219549546|gb|EED26537.1| SH3 domain protein [Vibrio parahaemolyticus 16]
Length = 203
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIV- 123
GP Y ++ + + G V+++ + QI+D G GW+ ++ + S +
Sbjct: 33 MHSGPSNQYRIIGS-IDAGDKVKLLSTDRATGYSQIQDDRGRKGWVESKFVTSQESMALR 91
Query: 124 ---SPWNRKTNNPIYINLYKKPDIQ 145
N D +
Sbjct: 92 LPKLEKELAETKERLANARSTSDQE 116
>gi|163847241|ref|YP_001635285.1| restriction endonuclease [Chloroflexus aurantiacus J-10-fl]
gi|222525082|ref|YP_002569553.1| restriction endonuclease [Chloroflexus sp. Y-400-fl]
gi|163668530|gb|ABY34896.1| restriction endonuclease [Chloroflexus aurantiacus J-10-fl]
gi|222448961|gb|ACM53227.1| restriction endonuclease [Chloroflexus sp. Y-400-fl]
Length = 351
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A + + + LP T+ + N R+ P + TV+ + G V +
Sbjct: 252 ATPTVMRQDVQPTRPVPTVRPTDLPALATV-FNGGNVRLAPNLRGTVI-DQIHAGEAVTL 309
Query: 91 VKE--YENWRQIRDFDGTIGWINKSLLS 116
+ W ++ + T GW+++SLL+
Sbjct: 310 LGRSPDGEWLRMINLRQTEGWVHRSLLT 337
>gi|319655123|ref|ZP_08009169.1| hypothetical protein HMPREF1013_05792 [Bacillus sp. 2_A_57_CT2]
gi|317393189|gb|EFV73981.1| hypothetical protein HMPREF1013_05792 [Bacillus sp. 2_A_57_CT2]
Length = 167
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 27/94 (28%), Gaps = 6/94 (6%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
E W + D GWI ++ KT + K IV VE
Sbjct: 6 EVWYR-ADLGTVQGWIKETAFQAVTLPPAPETGSKTVMIDKAPVRKGATDSYSIVTYVEK 64
Query: 155 GVLLTIRECSGE-----WCFGYNLDTEGWIKKQK 183
+ I + W +GWIK+
Sbjct: 65 NQKVNIIDSFKNANGEVWYRADLGTVQGWIKETA 98
>gi|224539995|ref|ZP_03680534.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518385|gb|EEF87490.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
DSM 14838]
Length = 279
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L SL + +I+ + F I F + +LA + + +
Sbjct: 169 LLASLYFFFFSKQIVWKKIGFIAGIVFLVLVLLANVFAFQQKNELLNRNNAIVLTPSVTV 228
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKS 113
R P L +G VE+ W++IR DG +GW+ S
Sbjct: 229 RSTPS-ESGTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPAS 274
>gi|325261078|ref|ZP_08127816.1| putative cell wall hydrolase [Clostridium sp. D5]
gi|324032532|gb|EGB93809.1| putative cell wall hydrolase [Clostridium sp. D5]
Length = 714
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYNLDTEGWIKK 181
V + +N+ + D + IV ++ L + + + EW + + D G++ K
Sbjct: 369 VVDKKYALTSIGLLNVREGKDTNTRIVGTLKAESLCYVLADENEEWVYIESGDVRGFVNK 428
Query: 182 QKI 184
+ +
Sbjct: 429 KYL 431
>gi|49476960|ref|YP_035139.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328516|gb|AAT59162.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 540
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 29/114 (25%), Gaps = 16/114 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + V V +E + W +I G W +
Sbjct: 231 PSLSSGITDLQHEP-QKVVVKEERDGWIKIVTSKGEK-W-------------TPLKEKTE 275
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y + S +V K + I E W W+ K ++
Sbjct: 276 VINEGFTTYAEASHSSKVVGKYGAQTVTVIEE-KDSWIRIRTNSGFQWVDKNQL 328
>gi|116619275|ref|YP_821431.1| hypothetical protein Acid_0131 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222437|gb|ABJ81146.1| conserved hypothetical protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 420
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 13/151 (8%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + I ++I L I + K +P+ + + R + VV T
Sbjct: 1 MSSGSITRVSIALILLLIFSGC-AKGPPAARPIGE-AFVGPATLKIRSDIPLQSPVVTT- 57
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----------SGKRSAIVSPWNRKTN 131
+ G +E+++ + ++R G GW ++ L A P
Sbjct: 58 VKHGDRLEILQTKRRFLRVRTPHGAEGWTDERQLLAASDMAALRELAARAAKMPSQGVAT 117
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+N++ +P + S +++ + +
Sbjct: 118 TYATLNIHTQPAVSSPSFLQLKENERFDVLQ 148
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
PV+ + W IR G GW+ L+S
Sbjct: 218 PVKAAPRLDGWSLIRAAGGQSGWVLTRLVS 247
>gi|302671486|ref|YP_003831446.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302395959|gb|ADL34864.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 428
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
EVV E ++ + + G N ++ + S K + L K +S +
Sbjct: 331 EVVGEETT--EVDNSENEDGDQNTQSADASQTTVKSSDTGKMQVSDTVRLRKSQSTESEV 388
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ + G + + E + W G+IK + +
Sbjct: 389 LEMIYSGSTVNVVEQYASGWAKVEYNKKTGYIKSEFL 425
>gi|226226017|ref|YP_002760123.1| NlpC/P60 family protein [Gemmatimonas aurantiaca T-27]
gi|226089208|dbj|BAH37653.1| NlpC/P60 family protein [Gemmatimonas aurantiaca T-27]
Length = 245
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
G VEV+ +W Q+R DG GW + L+
Sbjct: 24 AGEVVEVIDGRGDWVQVRGIDGYEGWTHVGYLTPS 58
>gi|149634568|ref|XP_001512205.1| PREDICTED: similar to SH3 multiple domains 1 [Ornithorhynchus
anatinus]
Length = 1081
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 170 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLESQNGTRDDSDINTSKAGEEEKYVT 228
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + + W + L EGW +
Sbjct: 229 IQPYTSQSKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 275
>gi|119477916|ref|XP_001259306.1| NlpC/P60-like cell-wall peptidase, putative [Neosartorya fischeri
NRRL 181]
gi|119407460|gb|EAW17409.1| NlpC/P60-like cell-wall peptidase, putative [Neosartorya fischeri
NRRL 181]
Length = 282
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 9/73 (12%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
I+A I P I N R GPG + VV +Y KG V +V +
Sbjct: 36 LSIVAACLAAIIPSVSAYP----ITGDGVNCRSGPGTNHPVVKSY-PKGHDVSIVCQAPG 90
Query: 97 WRQIRDFDGTIGW 109
D G W
Sbjct: 91 ----TDVKGDKLW 99
>gi|259416450|ref|ZP_05740370.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Silicibacter sp.
TrichCH4B]
gi|259347889|gb|EEW59666.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Silicibacter sp.
TrichCH4B]
Length = 289
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE----YENWRQIRDFDGTIGWINKSL 114
+ N R P V+ + G PV V++ +W Q+ + G GWI S
Sbjct: 222 SSNGDTLNMRRWPSFNPNVI-AKIPDGTPVPVLRRGTFAGRDWLQV-FYAGQEGWIVASY 279
>gi|197103436|ref|YP_002128814.1| hypothetical protein PHZ_p0297 [Phenylobacterium zucineum HLK1]
gi|196480712|gb|ACG80239.1| hypothetical protein PHZ_p0297 [Phenylobacterium zucineum HLK1]
Length = 518
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE------GWIKKQKI 184
L PD ++ + + P L + E W D GWI ++++
Sbjct: 460 LRSAPDAKAPAIRAIYPDQPLRVLEAGEAWAKVEAFDYASDRPLIGWISRRRL 512
>gi|172058731|ref|YP_001815191.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171991252|gb|ACB62174.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 227
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 19/56 (33%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + P ++ IV KV G T + SG W ++ Q
Sbjct: 33 TKVKITDSGLRVRTGPSTKASIVGKVNAGQTFTYKGKSGSWTKISYGGKTRYVSTQ 88
>gi|210614133|ref|ZP_03290069.1| hypothetical protein CLONEX_02282 [Clostridium nexile DSM 1787]
gi|210150834|gb|EEA81842.1| hypothetical protein CLONEX_02282 [Clostridium nexile DSM 1787]
Length = 312
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ Y+ + +P S V K+ + GEW + + G++K + I
Sbjct: 72 TQVEEGSYLFVRTEPSQDSEWVGKLYEADAAKVVGPVGEWTQIESGNVTGYVKTEYI 128
>gi|229916413|ref|YP_002885059.1| 3D domain protein [Exiguobacterium sp. AT1b]
gi|229467842|gb|ACQ69614.1| 3D domain protein [Exiguobacterium sp. AT1b]
Length = 200
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+Y + + ++ K+ L G W GW+ + +
Sbjct: 42 MVYAEGKSNARVIGKIAASDRLQRTGSRGAWIRVNYKGKAGWVPTKNL 89
>gi|313898168|ref|ZP_07831707.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. HGF2]
gi|312957196|gb|EFR38825.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. HGF2]
Length = 317
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWIN 111
V I + N R GPG Y + KG+ +V+E + W +++ GWI+
Sbjct: 256 VQIDIANLNIRKGPGTNYGKTGQFTGKGI-FTIVQEAKGEGATLWGKLK---SGAGWIS 310
>gi|315658098|ref|ZP_07910970.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus lugdunensis
M23590]
gi|315496427|gb|EFU84750.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus lugdunensis
M23590]
Length = 291
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWIK 180
L P+ ++ KV+ G T +G+W N GWI
Sbjct: 53 ELRTGPNAAYPVIEKVDKGEGFTKINQTGKWIEVQNRQETKKGWIA 98
>gi|289550603|ref|YP_003471507.1| methicillin resistance/N-acetylmuramoyl-L-alanine amidase
domain-containing protein, LytH [Staphylococcus
lugdunensis HKU09-01]
gi|289180135|gb|ADC87380.1| methicillin resistance/N-acetylmuramoyl-L-alanine amidase
domain-containing protein, LytH [Staphylococcus
lugdunensis HKU09-01]
Length = 291
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWIK 180
L P+ ++ KV+ G T +G+W N GWI
Sbjct: 53 ELRTGPNAAYPVIEKVDKGEGFTKINQTGKWIEVQNRQETKKGWIA 98
>gi|224534340|ref|ZP_03674918.1| conserved hypothetical protein [Borrelia spielmanii A14S]
gi|224514442|gb|EEF84758.1| conserved hypothetical protein [Borrelia spielmanii A14S]
Length = 667
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 10/110 (9%)
Query: 16 KYMPKILQNSLIFTL--AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ K L+ +IF L A+ F + E++ IK + P
Sbjct: 566 RFLAKNLKKIIIFLLFSAVCFTIFETYYFYSEQQSEVGI-------IKGDLVSLYKVPD- 617
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
++ +L V ++ +++ I G GW++K+ + R ++
Sbjct: 618 NFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGWVHKNFVVSLRDNLI 667
>gi|210614128|ref|ZP_03290064.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
gi|210150829|gb|EEA81837.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
Length = 623
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R T+K R G+ + K V V++ +W+++R DG IG+I K+ L
Sbjct: 210 RTATVKKDT-QVRYRGGVKSPYLTEVSKKD-KVTVIENEGDWKKVRTEDGYIGYIKKNCL 267
Query: 116 SGKR 119
++
Sbjct: 268 KNEK 271
>gi|218903971|ref|YP_002451805.1| NLP/P60 family protein [Bacillus cereus AH820]
gi|218535950|gb|ACK88348.1| NLP/P60 family protein [Bacillus cereus AH820]
Length = 333
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV E +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDEKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|221125132|ref|XP_002158214.1| PREDICTED: similar to SH3 multiple domains 1 [Hydra magnipapillata]
Length = 493
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 82 LTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V++++EN W + + GW S L SG + ++ K I
Sbjct: 175 LAIGDVVDVIEKHENGWWFVSL-EDEQGWAPGSYLEPVSGSKDSMEESVYGKEEKFICTK 233
Query: 138 LYK--KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-----NLDTEGWIKKQKI 184
YK +PD S+ + V+ + +CS W + +G++ +
Sbjct: 234 PYKALQPDELSLALG----DVVFVLGKCSDGWWNVRLKSDLEKNYDGFVPAVHL 283
>gi|51244493|ref|YP_064377.1| hypothetical protein DP0641 [Desulfotalea psychrophila LSv54]
gi|50875530|emb|CAG35370.1| hypothetical membrane protein (BatE) [Desulfotalea psychrophila
LSv54]
Length = 241
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ S LAI + LS E + P +V ++ SR N I P
Sbjct: 142 KMSRKKALAIICSSVIAMLLSSEATAISYQQWPIYVLVEESR-NLLISPFENAASAGLIK 200
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
G+ + V K Y + I D + GW+ L R+ I+ P +
Sbjct: 201 EGGM-ILVHKRYGKYSYIEDKNDQGGWVKSKAL---RAVILDPAS 241
>gi|47564848|ref|ZP_00235892.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
G9241]
gi|47558221|gb|EAL16545.1| surface-layer N-acetylmuramoyl-L-alanine amidase, [Bacillus cereus
G9241]
Length = 529
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVKEQRADGWLKIVTSKGEK-W-------------TPLKEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 264 ETINQDFTAYELASHSSKVLGTYNAQTV-TIMEESGSWIRIRVGAGFQWVDKNQL 317
>gi|332884049|gb|EGK04329.1| hypothetical protein HMPREF9456_01357 [Dysgonomonas mossii DSM
22836]
Length = 401
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGW---INKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G P+ ++++ + W +I+ DG I W IN ++ + + + Y
Sbjct: 134 GTPIRILQK-DGWSRIQTPDGYIAWTQEINYHPMTRTEFEDWNSAKKIIFTDYFGFAYSA 192
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
PD QS V+ + +L G++ + +I K +
Sbjct: 193 PDTQSQTVSDLVSCNILKKEGEVGDFYKVSYPDGRKAYILKSQ 235
>gi|290892450|ref|ZP_06555444.1| NLP/P60 family protein [Listeria monocytogenes FSL J2-071]
gi|290558016|gb|EFD91536.1| NLP/P60 family protein [Listeria monocytogenes FSL J2-071]
Length = 230
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 12/99 (12%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
KI + ++ P S + + N R V+
Sbjct: 11 RKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRTADNTKGKVI 61
Query: 79 CTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
Y KG V + NW + ++G +G+++ L+
Sbjct: 62 GFY-KKGTTVTFTAKTNNNWYKTT-YNGKVGYVSGKCLT 98
>gi|226949691|ref|YP_002804782.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842387|gb|ACO85053.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 253
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ WIN L G+ I N P +N+ +K S I+ + + +
Sbjct: 182 NNNNSWIN---LDGRTGTI--------NTPSGVNVREKKSTSSRILGALPNSSKVNLYRK 230
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G+W Y G++ + +
Sbjct: 231 EGDWIHIYYPPHGGYVYAKYV 251
>gi|224531605|ref|ZP_03672237.1| conserved hypothetical protein [Borrelia valaisiana VS116]
gi|224511070|gb|EEF81476.1| conserved hypothetical protein [Borrelia valaisiana VS116]
Length = 668
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 16 KYMPKILQNSLIFTL--AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ K L+ +IF L A+ F + E++ IK + P
Sbjct: 567 RFLAKNLKKIIIFLLFSAVCFTMFETYYFYSEQQSEVGI-------IKGDLVSLYKVPD- 618
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ +L V ++ +++ I G GWI+K+ +
Sbjct: 619 NFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGWIHKNFV 660
>gi|217965516|ref|YP_002351194.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|217334786|gb|ACK40580.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|307569930|emb|CAR83109.1| NLP/P60 domain protein [Listeria monocytogenes L99]
Length = 227
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 12/99 (12%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
KI + ++ P S + + N R V+
Sbjct: 8 RKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRTADNTKGKVI 58
Query: 79 CTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS 116
Y KG V + NW + ++G +G+++ L+
Sbjct: 59 GFY-KKGTTVTFTAKTNNNWYKTT-YNGKVGYVSGKCLT 95
>gi|149275881|ref|ZP_01882026.1| lipoprotein; possible cell wall-associated hydrolase [Pedobacter
sp. BAL39]
gi|149233309|gb|EDM38683.1| lipoprotein; possible cell wall-associated hydrolase [Pedobacter
sp. BAL39]
Length = 258
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLS 116
R+ +V L G V V+ WRQ+R+ +DG GW++ L+
Sbjct: 15 LRVSASDRAEIVSQLLF-GEHVMVIGRDAQWRQVRNVYDGYEGWVDFKQLA 64
>gi|309812311|ref|ZP_07706066.1| aldose 1-epimerase [Dermacoccus sp. Ellin185]
gi|308433616|gb|EFP57493.1| aldose 1-epimerase [Dermacoccus sp. Ellin185]
Length = 364
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 9/113 (7%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ TLA+ + L+H + P+P V + P + G
Sbjct: 1 MITLAMAVEGFTLTILAHGADNPNDAPVPYAVGVTNDE-----QPTLPSGTQWHIRASGY 55
Query: 87 PVEVVKEYENWRQIRDFDGTI---GWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+V+ R +R DG G+ ++ R +++PW + Y
Sbjct: 56 EATIVEVGGGLRALR-HDGEDIVHGYAEDTMADASRGHVLAPWPNRIAGGRYA 107
>gi|282858827|ref|ZP_06267972.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
gi|282588396|gb|EFB93556.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
Length = 861
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
F + + + P + G VE++ + + W ++ DG GWI K L
Sbjct: 800 FAIVTSPSVVVKTAPDAAASKAFIIHE-GTKVEILDKSMDQWWEVTLEDGRRGWIEKGLT 858
>gi|86148792|ref|ZP_01067060.1| SH3 domain protein [Vibrio sp. MED222]
gi|85833411|gb|EAQ51601.1| SH3 domain protein [Vibrio sp. MED222]
Length = 200
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 67 SRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
GP + ++ + + + + Q++D G GW+ +S K S +
Sbjct: 30 MHSGPNNTFRIIGSIDAGEKITYLQTNKSTGYTQVQDSRGRKGWVESKFVSTKESMALRM 89
Query: 126 ----WNRKTNNPIYINLYKKPDIQSIIVA 150
N + D + +A
Sbjct: 90 PKLEKELSEVKGKLANARQSADSEKAGLA 118
>gi|291614767|ref|YP_003524924.1| SH3 type 3 domain protein [Sideroxydans lithotrophicus ES-1]
gi|291584879|gb|ADE12537.1| SH3 type 3 domain protein [Sideroxydans lithotrophicus ES-1]
Length = 166
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 115 LSGKRSAIV-------SPWNRKTNNPIYIN-LYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
++G R+ +V + W ++ + L +P + V + G ++I G
Sbjct: 3 IAGIRTIVVCALLCAQTAWAAESGTLLKAEELKAEPYRDAKTVKALAAGEKVSILGKQGG 62
Query: 167 WCFGYNLDTEGWIK 180
W GW+
Sbjct: 63 WFKVKTGKGNGWVH 76
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 19/130 (14%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ + I T+ + L A + E +KA + P V
Sbjct: 1 MKIAGIRTIVVCALLCAQTAWAAESGTL----------LKAEE--LKAEPYRDAKTV-KA 47
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L G V ++ + W +++ G GW++ +LS ++ + + + + L
Sbjct: 48 LAAGEKVSILGKQGGWFKVKTGKGN-GWVH--MLSVRKGDVPKGASASSG---LLALSSG 101
Query: 142 PDIQSIIVAK 151
+VA
Sbjct: 102 RAGTGKVVAT 111
>gi|168070973|ref|XP_001787008.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162659954|gb|EDQ48178.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
E + +PLP KA N GPG + V+ G
Sbjct: 254 EVIAQDGEPLPSSARYKADTVNV--GPGQRFDVIWIARKPG 292
>gi|149689696|ref|XP_001497955.1| PREDICTED: SH3 and PX domains 2A isoform 2 [Equus caballus]
Length = 1100
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|88799628|ref|ZP_01115204.1| hypothetical protein MED297_04562 [Reinekea sp. MED297]
gi|88777713|gb|EAR08912.1| hypothetical protein MED297_04562 [Reinekea sp. MED297]
Length = 390
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPG--VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++P++ S ++ K+ G V + G W G+ + +
Sbjct: 332 TASILNVREQPNVGSDVIIKLAEGDRVWAYPQAAEGLWMQVRVDGLTGYASSRFL 386
>gi|161019621|gb|ABX56142.1| putative alanine amidase [Bacillus phage bg2]
Length = 311
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 34/131 (25%), Gaps = 14/131 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL- 115
V + A N R P ++V Y + + W + G W + + L
Sbjct: 182 VRVTADVLNLRNQPSTNGSIVGKIYKGQDYKFWAIS--NGWYNL----GGNQWASGTYLQ 235
Query: 116 ---SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
G + +N+ ++ ++ + W
Sbjct: 236 VISGGTPQPPKAVTGIAYITGYNVNMRTGAGTGYSVIRQLNAPESYKVWGMKDGWLNL-- 293
Query: 173 LDTEGWIKKQK 183
+ WIK
Sbjct: 294 -GGDQWIKNDS 303
>gi|260429244|ref|ZP_05783221.1| SH3, type 3 domain protein [Citreicella sp. SE45]
gi|260419867|gb|EEX13120.1| SH3, type 3 domain protein [Citreicella sp. SE45]
Length = 204
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ PD + ++ + P V +T G W + GW +
Sbjct: 30 TGVAAGDVLNVRTAPDAAADVIGALAPNQQNVEVTASNDDGNWGRVNIGEGTGWASLSFL 89
>gi|51598431|ref|YP_072619.1| hypothetical protein BG0169 [Borrelia garinii PBi]
gi|51573002|gb|AAU07027.1| hypothetical protein BG0169 [Borrelia garinii PBi]
Length = 683
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 16 KYMPKILQNSLIFTL--AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K++ K L+ +IF L AI F + E++ IK + P
Sbjct: 582 KFLAKNLKKIIIFLLFSAICFTMFETYYFYSEQQSEVGI-------IKGDLVSLYKVPD- 633
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ +L V ++ +++ I G GWI+K+ +
Sbjct: 634 NFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGWIHKNFV 675
>gi|315650928|ref|ZP_07903969.1| N-acetylmuramoyl-L-alanine amidase [Eubacterium saburreum DSM 3986]
gi|315486842|gb|EFU77183.1| N-acetylmuramoyl-L-alanine amidase [Eubacterium saburreum DSM 3986]
Length = 293
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
+ K +N+ P ++A + GV + + W + ++
Sbjct: 228 TVATTKYVTTSKLNVRSSPSKDGDLLATLNVGVTVDYVGAQDSSWAIINYNGGQAYVASA 287
Query: 183 KI 184
I
Sbjct: 288 YI 289
>gi|229008551|ref|ZP_04165975.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228752715|gb|EEM02319.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 338
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS--GKRS 120
N R GPG Y+V+ L K +V E + W + G W+ S + K
Sbjct: 209 VNLRKGPGASYSVI-RQLNKSESYKVWGEKDGWLNL----GRNQWVYNNPSYIKFEKKEP 263
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
R + + Y P Q VA
Sbjct: 264 VNPIVGKRVVSKVDNLRFYDSPSWQDKDVA 293
>gi|168186014|ref|ZP_02620649.1| bacterial SH3 domain family [Clostridium botulinum C str. Eklund]
gi|169296034|gb|EDS78167.1| bacterial SH3 domain family [Clostridium botulinum C str. Eklund]
Length = 224
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ KP Q + ++ G + + + C W Y G++ I
Sbjct: 174 VRDKPGTQGNKIGSLQKGSRVKLFKNCGNGWYEIYYGAHGGYVSADYI 221
>gi|332291580|ref|YP_004430189.1| Peptidase M23 [Krokinobacter diaphorus 4H-3-7-5]
gi|332169666|gb|AEE18921.1| Peptidase M23 [Krokinobacter diaphorus 4H-3-7-5]
Length = 381
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
R+ P + T K V ++++ NW +R D G++ K+ + S
Sbjct: 328 MRLSPTSTSEKIGTLKRKDT-VLLLEKTGNWFHVRAHDSLQGYLYKTAIKSIPS 380
>gi|225849712|ref|YP_002729946.1| SH3 domain family protein [Persephonella marina EX-H1]
gi|225644894|gb|ACO03080.1| bacterial SH3 domain family protein [Persephonella marina EX-H1]
Length = 204
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRA------NSRIGPGIMYTVVCTYLTKGLPVEVV 91
P++ ++ + P +IK +A N R P + V+ + +
Sbjct: 99 PVMEDQTDQISLQDTAKPE-ESIKPLKAVSTVWLNLRENPRLDSEVLTVINKGDSVLVID 157
Query: 92 KEYENWRQI---RDFDGTIGWINKSLL 115
+ + +W+++ +D GW++ L
Sbjct: 158 QRFNHWKKVIYIKDDQVYTGWVDDRYL 184
>gi|163848515|ref|YP_001636559.1| SH3 type 3 domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526449|ref|YP_002570920.1| SH3 type 3 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669804|gb|ABY36170.1| SH3 type 3 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222450328|gb|ACM54594.1| SH3 type 3 domain protein [Chloroflexus sp. Y-400-fl]
Length = 351
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 43 SHEKEIFEKKPLPR--FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK---EYEN- 96
+ + R V+ + N R+ PG V L G VE++ E +
Sbjct: 270 APPTAAPTGLAVGRRATVSSEIPALNVRVEPGTNAAVR-VALAPGTEVEIIAGPVERDGL 328
Query: 97 -WRQIRDFDGTIGWINKSLL 115
W Q+R G GW LL
Sbjct: 329 TWWQVR-SAGIEGWCAGELL 347
>gi|313159211|gb|EFR58584.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
Length = 272
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ PD S + + G ++TI +WC +GW++
Sbjct: 222 VKSSPDKSSTDLFVLHEGTVVTITNRLDDWCEVVIADGKKGWLE 265
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 11/86 (12%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
L+ L +F L + + V + AS A + P T + L +G
Sbjct: 191 LLCMLTTWFALGERREMLDDTSA---------VVMTASTA-VKSSPDKSSTDLFV-LHEG 239
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWIN 111
V + ++W ++ DG GW+
Sbjct: 240 TVVTITNRLDDWCEVVIADGKKGWLE 265
>gi|158333282|ref|YP_001514454.1| hypothetical protein AM1_0052 [Acaryochloris marina MBIC11017]
gi|158303523|gb|ABW25140.1| hypothetical protein AM1_0052 [Acaryochloris marina MBIC11017]
Length = 87
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWI 110
SR N R P Y G V+V+ W + G GWI
Sbjct: 22 GSRVNVRSAPSTSSYSP-HYGLVGDRVQVINSTTGNDGYYWYYVEFPSGARGWI 74
>gi|126732857|ref|ZP_01748648.1| hypothetical protein SSE37_18302 [Sagittula stellata E-37]
gi|126706633|gb|EBA05707.1| hypothetical protein SSE37_18302 [Sagittula stellata E-37]
Length = 102
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 6/63 (9%), Positives = 22/63 (34%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFG---YNLDTEGWIKK 181
+ + + P +++ + G ++ + +C WC + G++ +
Sbjct: 37 GVEGDDMLKMREGPGTGYVVIVGLPNGTVVRVLDCQRTGATKWCEVGLDRAMGLRGFVSQ 96
Query: 182 QKI 184
+
Sbjct: 97 AYL 99
>gi|329928546|ref|ZP_08282413.1| copper amine oxidase N-terminal domain protein [Paenibacillus sp.
HGF5]
gi|328937662|gb|EGG34071.1| copper amine oxidase N-terminal domain protein [Paenibacillus sp.
HGF5]
Length = 585
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
AI + L + + +S IV + G L + W F G++
Sbjct: 180 AIQLAKAAPGKPEDTVALRESGEKKSPIVLDMPAGERLRVWREEEGWLFVQADNGYTGYV 239
Query: 180 KKQKI 184
K++I
Sbjct: 240 LKEQI 244
>gi|313622265|gb|EFR92769.1| GW repeat-containing surface protein [Listeria innocua FSL J1-023]
Length = 510
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 81 YLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYI 136
Y + L + E E W IR+ + IGW+N S LS ++ + K + +
Sbjct: 231 YTNRNLEISWEAKTEKGLWYFIRENNKDIGWVNSSALTLSYHQNNDENVDTTKYVDDLNA 290
Query: 137 NLYKKPDI----QSIIVAKVEPGVLLTIRECSGE---WCFGY-NLDTEGWIKKQKI 184
++Y+ P + +AK + L T ++ + + W + GW++ K+
Sbjct: 291 HIYRLPSPEQQFDNGTIAKYDRKALHTDKKITRDGYAWFRLSESSKVIGWVRSDKL 346
>gi|302389190|ref|YP_003825011.1| NLP/P60 protein [Thermosediminibacter oceani DSM 16646]
gi|302199818|gb|ADL07388.1| NLP/P60 protein [Thermosediminibacter oceani DSM 16646]
Length = 383
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 22/131 (16%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTK-GLPVEVVKEYENWRQIRDFDGTIGWINKS-- 113
+ +K N + PG + G VE+ +E W ++R DG +GW + S
Sbjct: 110 YGVVKVPVLNLGMEPGKAEGKGTVTQARMGDVVELFEEKHGWYRVRMEDGYLGWADGSKL 169
Query: 114 ----------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
LSG+ + +VS ++ + G L +
Sbjct: 170 WIADKPSLSGYLSGRFALVVSKKTVPLLGIGGGRVFDGD---------LVQGTTLPLISI 220
Query: 164 SGEWCFGYNLD 174
G+W
Sbjct: 221 EGDWARLMLPG 231
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIW 185
V + G ++ + E W GW K+W
Sbjct: 133 VTQARMGDVVELFEEKHGWYRVRMEDGYLGWADGSKLW 170
>gi|256831577|ref|YP_003160304.1| Peptidase M23 [Jonesia denitrificans DSM 20603]
gi|256685108|gb|ACV08001.1| Peptidase M23 [Jonesia denitrificans DSM 20603]
Length = 424
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 39/142 (27%), Gaps = 16/142 (11%)
Query: 49 FEKKPLPRFVT-----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRD 102
K +PR T A + R L G ++++ + W ++
Sbjct: 283 PTKAAVPRATTKVRYYSAAKKVVLRSKASSTSAKK-RTLASGTRMKLISVKKNGWAKVT- 340
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
GT GW+ V +++ + V + ++
Sbjct: 341 VSGTTGWL--------PPKTVRLIDKRHRITTPTTMRTTAWANGKAVTNLAKKKTISPIT 392
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + +GW+ I
Sbjct: 393 SEHGWTYITVGGNKGWVPAAHI 414
>gi|305676189|ref|YP_003867861.1| exported N-acetylglucosaminidase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|219937605|emb|CAJ97392.1| putative endo-beta-N-acetylglucosaminidase [Bacillus subtilis
subsp. spizizenii str. W23]
gi|305414433|gb|ADM39552.1| exported N-acetylglucosaminidase (major autolysin) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 880
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R P ++ T V KG V+++ + W +I +GW N S S +
Sbjct: 634 TVTADVLNIRSTPAVIPTNVIGQFKKGDKVKIISQTNGWAKI-----NLGWRNAS--SDE 686
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
V P N ++ Y K + V +V VL
Sbjct: 687 VVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEVNQKVLA 726
>gi|42523332|ref|NP_968712.1| hypothetical protein Bd1848 [Bdellovibrio bacteriovorus HD100]
gi|39575538|emb|CAE79705.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 470
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
LSG R R + L S +V V G L + EC W +
Sbjct: 86 LSGDRLIRDIQVARFVETRSPVTLLSLNRSDSSLVKSVPGGHQLELLECDDYWARVKERN 145
Query: 175 --TEGWIKKQKI 184
T+GW+ +
Sbjct: 146 STTQGWLPLHLL 157
>gi|301763090|ref|XP_002916977.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Ailuropoda
melanoleuca]
Length = 887
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 153 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-T 210
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 211 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 252
>gi|281351235|gb|EFB26819.1| hypothetical protein PANDA_005112 [Ailuropoda melanoleuca]
Length = 885
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 151 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-T 208
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 209 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 250
>gi|86141038|ref|ZP_01059597.1| peptidase [Leeuwenhoekiella blandensis MED217]
gi|85832980|gb|EAQ51429.1| peptidase [Leeuwenhoekiella blandensis MED217]
Length = 376
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TI ++AN R + K V ++ + +W I ++++SL+
Sbjct: 318 TITTAQANLRSSASAKSQKIGALARKDT-VRLLGKSADWLHIETSAAQRAFVHQSLVKA 375
>gi|229060521|ref|ZP_04197882.1| Polysugar degrading enzyme [Bacillus cereus AH603]
gi|228718765|gb|EEL70389.1| Polysugar degrading enzyme [Bacillus cereus AH603]
Length = 333
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLSGKRSAI-VSPWNRKTNNPIY 135
G V V+ + +W ++ R+ +G GW+ + L+ + + +
Sbjct: 89 GQEVTVIDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFVDKTNEPFVLITKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+Y P + + +V L + + W++K
Sbjct: 149 AIVYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|260664749|ref|ZP_05865600.1| muramidase [Lactobacillus jensenii SJ-7A-US]
gi|260561232|gb|EEX27205.1| muramidase [Lactobacillus jensenii SJ-7A-US]
Length = 717
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 16/91 (17%)
Query: 108 GWINKSLLSGKRS----AIVSPWNRKTNNPIYINLYKKP-----DIQSIIVAKVEPG--- 155
GWIN SLL+G + + N +Y + S +V ++ G
Sbjct: 255 GWINGSLLTGSSTQATTTEKAGTTTDAGNAAIKVVYTSAIAEWKNPGSGVVGYLQKGTTQ 314
Query: 156 -VLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
V+ I+ W + + W+ + ++
Sbjct: 315 TVVGKIQVNGAWWYKLSSGN---WVPGEYVY 342
>gi|15806378|ref|NP_295084.1| endopeptidase-like protein [Deinococcus radiodurans R1]
gi|6459116|gb|AAF10933.1|AE001982_7 endopeptidase-related protein [Deinococcus radiodurans R1]
Length = 312
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
+L PD ++ V++ PG L GEW + GW+++Q++
Sbjct: 65 ARAQARTSLRAAPDARATQVSEALPGEALERLADEGEWAWVRTPHDGYLGWVRQQEV 121
>gi|300775915|ref|ZP_07085775.1| polysugar degrading enzyme [Chryseobacterium gleum ATCC 35910]
gi|300505465|gb|EFK36603.1| polysugar degrading enzyme [Chryseobacterium gleum ATCC 35910]
Length = 238
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
N+ + + ++ IV ++ G I E W + EGW+ +++
Sbjct: 2 NKGICIVTVAPVRAENSDRAEIVTEILFGESADILEVDKNWTKIKMHYDGYEGWMDTKQL 61
>gi|266723|sp|Q01835|P60_LISGR RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149667|gb|AAA25285.1| extracellular protein [Listeria grayi]
Length = 511
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R P ++ + + + V+V E W +I +G G++N LS
Sbjct: 82 SVSATWLNVRHAPDANEKILTSLKGRTV-VKVESSEANGWNKISFDNGKTGYVNGKYLSD 140
Query: 118 KRSAIVSPWNRKTNNPIY 135
+ A T+
Sbjct: 141 AKVAAPVVTKAVTHKAEA 158
>gi|229151059|ref|ZP_04279269.1| Polysugar degrading enzyme [Bacillus cereus m1550]
gi|228632436|gb|EEK89055.1| Polysugar degrading enzyme [Bacillus cereus m1550]
Length = 333
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVIDKKGEWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLITKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + WI+K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWIRKN 195
>gi|225386377|ref|ZP_03756141.1| hypothetical protein CLOSTASPAR_00121 [Clostridium asparagiforme
DSM 15981]
gi|225047514|gb|EEG57760.1| hypothetical protein CLOSTASPAR_00121 [Clostridium asparagiforme
DSM 15981]
Length = 560
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNR--KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
KR I + WN K L + ++S I+ V G LT+ + +W
Sbjct: 154 KRVFIDTLWNPVPKAQAKRDGKLRARGGVKSPIITDVAKGDRLTVLDAMEKWSKVRTEDG 213
Query: 175 TEGWIKKQKI 184
G+I+ +++
Sbjct: 214 YMGYIENRRL 223
>gi|301054374|ref|YP_003792585.1| cell wall-associated hydrolase [Bacillus anthracis CI]
gi|300376543|gb|ADK05447.1| cell wall-associated hydrolase [Bacillus cereus biovar anthracis
str. CI]
Length = 333
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GWI + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWIPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|228953181|ref|ZP_04115237.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229070324|ref|ZP_04203572.1| Polysugar degrading enzyme [Bacillus cereus F65185]
gi|228712807|gb|EEL64734.1| Polysugar degrading enzyme [Bacillus cereus F65185]
gi|228806506|gb|EEM53069.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 333
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVIDKKGEWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLITKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + WI+K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWIRKN 195
>gi|254449131|ref|ZP_05062582.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
gi|198261245|gb|EDY85539.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
Length = 171
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R P + + +G V V+K WR++ G GW+ L +
Sbjct: 27 LRSKPIFNSG--GSRIDQGTAVSVIKSDGVWRKVSAPGGKTGWLPSYELRQSAGVVT--- 81
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAK-----VEPGVLLTIR 161
+K + + + + S + + VE GV+ TI
Sbjct: 82 QKKDGSVLGMLIRS----TSRLFGRSASEDVEQGVVATIG 117
>gi|301756230|ref|XP_002913947.1| PREDICTED: LOW QUALITY PROTEIN: SH3 and PX domain-containing
protein 2A-like [Ailuropoda melanoleuca]
Length = 1103
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|260889555|ref|ZP_05900818.1| putative enterotoxin, EntB [Leptotrichia hofstadii F0254]
gi|260860966|gb|EEX75466.1| putative enterotoxin, EntB [Leptotrichia hofstadii F0254]
Length = 160
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGK 118
N R P T+ T L G V + + ++W I+ G+I + ++ K
Sbjct: 108 NIREKPTTKSTIK-TKLKTGQTVYAISKTDDDWYYIKYNGNQYGYIYSNQVAKK 160
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPI-YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S+LS SAI T++ IN+ + S +V + G +L E SGEW
Sbjct: 12 ASILSMGFSAISMGAAFVTSSKDNAINIRQSATTDSKVVETITNGHILESNEKSGEWHKV 71
Query: 171 YN------LDTEGWIKKQKI 184
G+I ++
Sbjct: 72 TYYNDAIKKSFTGYIHNSQL 91
>gi|153816412|ref|ZP_01969080.1| hypothetical protein RUMTOR_02665 [Ruminococcus torques ATCC 27756]
gi|145846247|gb|EDK23165.1| hypothetical protein RUMTOR_02665 [Ruminococcus torques ATCC 27756]
Length = 652
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+IK R G+ V+ T + K V V+++ +W ++ DG IG++ + L+
Sbjct: 241 ASIKRDT-QVRYQGGVKSPVL-TEVKKSDKVTVLEDENDWMKVATKDGFIGYVKTNALNS 298
Query: 118 KRSAIVS-----PWNRKTNNPIYINLY----KKPDIQSIIVAKVE--PG------VLLTI 160
+VS P + IN+ D S I+ + G ++
Sbjct: 299 VEKELVSRDYEEPEYTNISENYTINMAWHNVSNADANSYILETIASTKGLNTIAPTWFSL 358
Query: 161 RECSGEWCFGYNLDTEGWIKKQ--KIWGIYPG 190
+ G + D + + ++W +
Sbjct: 359 ADTEGNITSLADADYVNYAHQSNLEVWAVLRD 390
>gi|109735007|gb|AAI18023.1| Sh3pxd2a protein [Mus musculus]
Length = 810
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|297687328|ref|XP_002821167.1| PREDICTED: SH3 and PX domain-containing protein 2A-like isoform 1
[Pongo abelii]
Length = 1105
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|182413598|ref|YP_001818664.1| oxidoreductase domain-containing protein [Opitutus terrae PB90-1]
gi|177840812|gb|ACB75064.1| oxidoreductase domain protein [Opitutus terrae PB90-1]
Length = 360
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYP 189
N +P ++ ++ GV+ I C +W GW + + G P
Sbjct: 123 NNRARP-ESYAMMDYLQQGVIGRINSCQAKWIRRTGIPGFGGWFTTKAMSGGGP 175
>gi|114632680|ref|XP_508015.2| PREDICTED: SH3 and PX domain-containing protein 2A [Pan
troglodytes]
Length = 1105
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|55957186|emb|CAI13961.1| SH3 and PX domains 2A [Homo sapiens]
gi|56462539|emb|CAI15351.1| SH3 and PX domains 2A [Homo sapiens]
Length = 1059
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 141 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 199
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 200 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 246
>gi|16080631|ref|NP_391459.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus subtilis subsp. subtilis str. 168]
gi|221311532|ref|ZP_03593379.1| N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315859|ref|ZP_03597664.1| N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221320772|ref|ZP_03602066.1| N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221325058|ref|ZP_03606352.1| N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus
subtilis subsp. subtilis str. SMY]
gi|729969|sp|P39848|LYTD_BACSU RecName: Full=Beta-N-acetylglucosaminidase; AltName: Full=Cell
wall-associated polypeptide 90; Short=CWBP90; Flags:
Precursor
gi|476093|gb|AAA67857.1| N-acetylglucosaminidase [Bacillus subtilis subsp. subtilis str.
168]
gi|1129074|dbj|BAA08089.1| beta-N-acetylglucosaminidase [Bacillus subtilis]
gi|2636104|emb|CAB15595.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus subtilis subsp. subtilis str. 168]
Length = 880
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R P + T V KG V+V+ + W +I +GW N S S +
Sbjct: 634 TVTADVLNIRSTPEVSPTNVIGQFKKGDKVKVIGQINGWAKI-----NLGWRNAS--SDE 686
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
V P N ++ Y K + V +V VL
Sbjct: 687 VVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEVNQKVLA 726
>gi|260436841|ref|NP_001158189.1| SH3 and PX domain-containing protein 2A isoform 2 [Mus musculus]
Length = 1096
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|126650731|ref|ZP_01722947.1| pipeptidyl-peptidase VI [Bacillus sp. B14905]
gi|126592396|gb|EAZ86414.1| pipeptidyl-peptidase VI [Bacillus sp. B14905]
Length = 276
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGY-NLDTEGWIKKQKI 184
+ + NL+ KPD S ++ +V G+ + I +C +W + +G+ +K +
Sbjct: 1 MKSIVTAMIANLHAKPDETSELIDEVLYGMTVDILTDCHEDWVYVQTAYRYKGYCQKADL 60
>gi|313888511|ref|ZP_07822178.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845540|gb|EFR32934.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 544
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S R ++ L KG + V +E + ++R +G G++ K L
Sbjct: 158 TTSETLLRESASKRSPII-KKLPKGEELYVYEEKGKFYKVRMPEGYAGYVLKKDLDENFE 216
Query: 121 AIVSPWNRKTNNPIYINL 138
+ K + INL
Sbjct: 217 KVSLKSTSKNTSDGPINL 234
>gi|253991025|ref|YP_003042381.1| signal transduction protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782475|emb|CAQ85639.1| similar to putative exported protein ygim of escherichia coli
[Photorhabdus asymbiotica]
Length = 206
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L + F L S + EK R+V+ + GPG Y + T L G V
Sbjct: 4 LPLLFTALLSLGFSLAAQAEEK----RYVS-DELSTYTHAGPGNKYRIAGT-LNAGDEVT 57
Query: 90 VVK--EYENWRQIRDFDGTIGWINKSLLSGKRS 120
++ N+ +++D G I W+ + LS K S
Sbjct: 58 LININRDSNYAEVKDDKGRIVWLPVNQLSNKPS 90
>gi|332212738|ref|XP_003255476.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 1
[Nomascus leucogenys]
Length = 1105
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|55749544|ref|NP_055446.2| SH3 and PX domain-containing protein 2A [Homo sapiens]
gi|119570010|gb|EAW49625.1| SH3 and PX domains 2A, isoform CRA_c [Homo sapiens]
gi|148922014|gb|AAI46310.1| SH3 and PX domains 2A [synthetic construct]
gi|162317708|gb|AAI56573.1| SH3 and PX domains 2A [synthetic construct]
Length = 1105
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|197116845|ref|YP_002137272.1| hypothetical protein Gbem_0447 [Geobacter bemidjiensis Bem]
gi|197086205|gb|ACH37476.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 167
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
G + VV+ W ++R +G GW+ +S
Sbjct: 50 GAELTVVEGAGRWLKVRSANGKEGWVYAGRVSDT 83
>gi|149655|gb|AAA25279.1| p60-related protein [Listeria grayi]
Length = 512
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSG 117
++ A+ N R P ++ + + + V+V E W +I +G G++N LS
Sbjct: 83 SVSATWLNVRHAPDANEKILTSLKGRTV-VKVESSEANGWNKISFDNGKTGYVNGKYLSD 141
Query: 118 KRSAIVSPWNRKTNNPIY 135
+ A T+
Sbjct: 142 AKVAAPVVTKAVTHKAEA 159
>gi|152974547|ref|YP_001374064.1| cell wall hydrolase/autolysin [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023299|gb|ABS21069.1| cell wall hydrolase/autolysin [Bacillus cytotoxicus NVH 391-98]
Length = 527
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + +EV + + W +I G W +
Sbjct: 219 PSLSSGITSNQHKPQI-IEVKEQRKDGWMKIVTSTGDK-W-------------TPLHEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y++ +S I+ K P + TI E SG+W W+ K+++
Sbjct: 264 EYIGESFTTYQEASHKSTILGKYGPQTV-TIMEESGDWIRIRTNAGFQWLDKKQL 317
>gi|228985945|ref|ZP_04146092.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773801|gb|EEM22220.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 333
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDAISYRVLLPNGQKAWLRKH 195
>gi|167767988|ref|ZP_02440041.1| hypothetical protein CLOSS21_02531 [Clostridium sp. SS2/1]
gi|167710317|gb|EDS20896.1| hypothetical protein CLOSS21_02531 [Clostridium sp. SS2/1]
gi|291560991|emb|CBL39791.1| Bacterial SH3 domain./N-acetylmuramoyl-L-alanine amidase
[butyrate-producing bacterium SSC/2]
Length = 264
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 5/61 (8%), Positives = 21/61 (34%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + + + + ++ S I+ K+ + + + W G+ +
Sbjct: 202 TAYAKVVTKSDPLMIRQSANVSSKIIGKIPKKSKVEVLKKGSTWTKVKYKSVTGYSATRY 261
Query: 184 I 184
+
Sbjct: 262 L 262
>gi|73954039|ref|XP_546237.2| PREDICTED: similar to neutrophil cytosolic factor 1 [Canis
familiaris]
Length = 884
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 157 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-T 214
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 215 ARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 256
>gi|295314804|gb|ADF97552.1| PlyM27 [uncultured phage]
Length = 177
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
V + A N R G GI Y + KG+ +V + W +++ GWIN
Sbjct: 121 VRVTADSLNYRAGAGIKYKINGAITDKGV-YTIVDQTNGWGKLK---SGAGWIN 170
>gi|291404771|ref|XP_002718755.1| PREDICTED: SH3 multiple domains 1 isoform 2 [Oryctolagus cuniculus]
Length = 1091
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 187 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDISTSKTGEEEKYVT 245
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 246 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|229163372|ref|ZP_04291324.1| hypothetical protein bcere0009_41380 [Bacillus cereus R309803]
gi|228620153|gb|EEK77027.1| hypothetical protein bcere0009_41380 [Bacillus cereus R309803]
Length = 216
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 77 VVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
V YL + + V+ + W ++R DG IGWI+ +++
Sbjct: 173 VELVYLEENVQVQDSDNQQRTWLKVRLPDGNIGWISGAIV 212
>gi|237716509|ref|ZP_04546990.1| BatE [Bacteroides sp. D1]
gi|262408107|ref|ZP_06084655.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645102|ref|ZP_06722828.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|294809503|ref|ZP_06768206.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|298484183|ref|ZP_07002349.1| aerotolerance-related exported protein [Bacteroides sp. D22]
gi|229444156|gb|EEO49947.1| BatE [Bacteroides sp. D1]
gi|262354915|gb|EEZ04007.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639608|gb|EFF57900.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|294443321|gb|EFG12085.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|298269687|gb|EFI11282.1| aerotolerance-related exported protein [Bacteroides sp. D22]
Length = 277
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
I L + + E + + + + R P L +G
Sbjct: 191 IVFLIVTICSNLFASQQKEHLVNRNEAI-----VMNPSVTVRSTPS-ESGTSLFILHEGR 244
Query: 87 PVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
V V + W++IR DG +GW+ S +
Sbjct: 245 KVNVKDNSMKEWKEIRLEDGKVGWVPASAI 274
>gi|254465307|ref|ZP_05078718.1| SH3, type 3 domain protein [Rhodobacterales bacterium Y4I]
gi|206686215|gb|EDZ46697.1| SH3, type 3 domain protein [Rhodobacterales bacterium Y4I]
Length = 214
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTEGWIK 180
+N+ P + I+ + P GV + + SG W + + GW
Sbjct: 31 AGVAADDVLNIRSTPSASAEIIGTLAPDQAGVEVVAADSSGAWGLVNSGERSGWAA 86
>gi|254495394|ref|ZP_05108318.1| NlpC/P60 family protein [Polaribacter sp. MED152]
gi|85819749|gb|EAQ40906.1| NlpC/P60 family protein [Polaribacter sp. MED152]
Length = 394
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R P + T G+ ++V+ + ++ +I+ DG I W++K +
Sbjct: 108 SVLNIRSAP-KHSAELGTQGLLGMSLKVLDKEGDFFRIQTPDGYISWVDKGGIYRMNKGE 166
Query: 123 VSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGW 178
W+ +Y D+ IV+ + G +L D +G+
Sbjct: 167 FDYWSNAKKIIYTNTAGFVYDNIDLNKSIVSDITLGGVLKYISEDKNTYEVEYPDKRKGF 226
Query: 179 IKKQK 183
IKK++
Sbjct: 227 IKKEE 231
>gi|229080037|ref|ZP_04212566.1| Polysugar degrading enzyme [Bacillus cereus Rock4-2]
gi|228703269|gb|EEL55726.1| Polysugar degrading enzyme [Bacillus cereus Rock4-2]
Length = 333
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVIDKKGEWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLITRPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + WI+K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWIRKN 195
>gi|55957188|emb|CAI13963.1| SH3 and PX domains 2A [Homo sapiens]
gi|119570007|gb|EAW49622.1| SH3 and PX domains 2A, isoform CRA_a [Homo sapiens]
gi|168278613|dbj|BAG11186.1| SH3 and PX domain-containing protein 2A [synthetic construct]
Length = 940
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 22 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 80
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 81 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 127
>gi|310815240|ref|YP_003963204.1| SH3 type 3 domain-containing protein [Ketogulonicigenium vulgare
Y25]
gi|308753975|gb|ADO41904.1| SH3 type 3 domain-containing protein [Ketogulonicigenium vulgare
Y25]
Length = 98
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGY---NLDTE 176
+ R + L P ++ ++ + G L ++C WC
Sbjct: 28 TTTVRGVGQNDLLKLRAGPSLEYAVILGLPDGTRLRRQDCVTELGQRWCRVSLAAAPGIH 87
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 88 GYVSADYL 95
>gi|303241313|ref|ZP_07327818.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
cellulolyticus CD2]
gi|302591152|gb|EFL60895.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
cellulolyticus CD2]
Length = 504
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F+ + A GP + V YL V V + W ++ GT G+I+ S+
Sbjct: 202 FMGYTSGNATLSSGPSLNVAPVG-YLKPWTEVSVTGKTGTWYNVKTAKGT-GYIHSSVT 258
>gi|298290275|ref|YP_003692214.1| NLP/P60 protein [Starkeya novella DSM 506]
gi|296926786|gb|ADH87595.1| NLP/P60 protein [Starkeya novella DSM 506]
Length = 288
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEGWIKKQKI 184
+ K+PD + +V + G +T+ E + E W GW+ + +
Sbjct: 47 APMRKEPDPSAPLVTEALFGESVTVYEMTIEGWAWGQIDADGYVGWLPAEAL 98
>gi|291387824|ref|XP_002710251.1| PREDICTED: SH3 and PX domains 2B [Oryctolagus cuniculus]
Length = 897
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 169 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSMQSEEEEKYTVIYPY-T 226
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ ++ G ++ + + + W EGW +
Sbjct: 227 ARDQDEMNLDRGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 268
>gi|282877520|ref|ZP_06286338.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
gi|281300344|gb|EFA92695.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
Length = 870
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 2/100 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ P ++ + F F++ I + + + A + P
Sbjct: 769 FGPNVMLRKIGFYGGCLFFVLFIFCNFFAYQQKYNLQNRKAAIVIAPSVAVKKTPANGSA 828
Query: 77 VVCTYLTKGLPVEVVKE-YENWRQIRDFDGTIGWINKSLL 115
G V++ + +WR IR DG GW+ +
Sbjct: 829 DEFVIHE-GTKVDITDKGLNDWRGIRLADGREGWLRTRQI 867
>gi|302876754|ref|YP_003845387.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307687434|ref|ZP_07629880.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302579611|gb|ADL53623.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 488
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGW 109
P V + S N R GPG Y Y+ KG+ +V+E + W +++ GW
Sbjct: 425 PYLVKVSISDLNIRKGPGTNYA-RTKYIPKGV-YTIVEESDGKGATKWGKLK---SGAGW 479
Query: 110 IN 111
I+
Sbjct: 480 IS 481
>gi|229035419|ref|ZP_04189321.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
gi|228727912|gb|EEL78986.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
Length = 354
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Query: 40 LALSHEKEIFEKKPLPRFVT-----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ +S ++ + +P VT I+ N R GPG Y+ + L K V E
Sbjct: 194 VDVSVPEKPSKPAEVPTAVTDGIAYIEGYNVNLRKGPGTSYSKI-RQLNKPETYVVWAEK 252
Query: 95 ENWRQIRDFDGTIGWI----NKSLLSGKRSA-IVSPWNRKTNNPIYINLYKKPD-IQSII 148
+ W + G W+ + S K + R + + Y P +
Sbjct: 253 DGWLNL----GGEQWVKNDPSYVKFSKKSTVDSSIVGKRVVSKVDNLRFYDAPSWQDKDV 308
Query: 149 VAKVEPG 155
V V+ G
Sbjct: 309 VGSVDTG 315
>gi|89054004|ref|YP_509455.1| hypothetical protein Jann_1513 [Jannaschia sp. CCS1]
gi|88863553|gb|ABD54430.1| hypothetical protein Jann_1513 [Jannaschia sp. CCS1]
Length = 199
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKP--LPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ + + + + A F P +P + + N R GPG+ + + + L
Sbjct: 93 FVQGVQLTCTVFAVTAPGDNGGGFAAVPLNIPAY----SYGGNLRSGPGMQFGTLGS-LP 147
Query: 84 KGLPVEVVKEYE------NWRQIRDFDGTIGW 109
+G + +++E W +R F+G +
Sbjct: 148 EGTTITIIEETGIYMGDHQWFGVRLFNGQTAY 179
>gi|317502461|ref|ZP_07960624.1| hypothetical protein HMPREF1026_02569 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089287|ref|ZP_08338189.1| hypothetical protein HMPREF1025_01772 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896146|gb|EFV18254.1| hypothetical protein HMPREF1026_02569 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405839|gb|EGG85368.1| hypothetical protein HMPREF1025_01772 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 652
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+IK R G+ V+ T + K V V+++ +W ++ DG IG++ + L+
Sbjct: 241 ASIKRDT-QVRYQGGVKSPVL-TEVKKSDKVTVLEDENDWMKVATKDGFIGYVKTNALNS 298
Query: 118 KRSAIVS-----PWNRKTNNPIYINLY----KKPDIQSIIVAKVE--PG------VLLTI 160
+VS P + IN+ D S I+ + G ++
Sbjct: 299 VEKELVSRDYEEPEYTNISENYTINMAWHNVSNADANSYILETIASTKGLNTIAPTWFSL 358
Query: 161 RECSGEWCFGYNLDTEGWIKKQ--KIWGIYPG 190
+ G + D + + ++W +
Sbjct: 359 ADTEGNITSLADADYVNYAHQSNLEVWAVLRD 390
>gi|169836059|ref|ZP_02869247.1| possible internalin protein [candidate division TM7 single-cell
isolate TM7a]
Length = 432
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 57 FV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT-----IGWI 110
FV + K + N R + +++ L + VE + ++WR + ++ G+I
Sbjct: 368 FVTSSKENTVNVRESNDLDSSIIYK-LANNIEVEEISNEKDWRYVYFYNKDGGYYMKGYI 426
Query: 111 NKSLL 115
+KS L
Sbjct: 427 HKSQL 431
>gi|255693876|ref|ZP_05417551.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
17565]
gi|260620305|gb|EEX43176.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
17565]
Length = 278
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S I L I + E + + + + R P L +
Sbjct: 190 SGIIFLIITICANLFASEQKEHLVIRNEAI-----VMNPSVTVRSTPS-ESGTSLFILHE 243
Query: 85 GLPVEVVK-EYENWRQIRDFDGTIGWINKSLL 115
G V + + W++IR DG +GW+ S +
Sbjct: 244 GRKVSIKDNSMKEWKEIRLEDGKVGWVPASAI 275
>gi|315102733|gb|EFT74709.1| NlpC/P60 family protein [Propionibacterium acnes HL046PA1]
Length = 388
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|108763410|ref|YP_633797.1| putative batE protein [Myxococcus xanthus DK 1622]
gi|108467290|gb|ABF92475.1| putative batE protein [Myxococcus xanthus DK 1622]
Length = 236
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + + + + ++ + F +A L + + V + + +R P
Sbjct: 132 VLLWRLLGRGRRTAVGVLAVLLFAVAVPSGLLVATHAYVGASVHEAVVLAPTLV-ARELP 190
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ + GL V +++E + +IR +G GW
Sbjct: 191 QPGARSIFE-VHAGLKVRLLEETGRFVRIRLPNGLEGW 227
>gi|229103453|ref|ZP_04234135.1| Polysugar degrading enzyme [Bacillus cereus Rock3-28]
gi|229116359|ref|ZP_04245749.1| Polysugar degrading enzyme [Bacillus cereus Rock1-3]
gi|228667191|gb|EEL22643.1| Polysugar degrading enzyme [Bacillus cereus Rock1-3]
gi|228679949|gb|EEL34144.1| Polysugar degrading enzyme [Bacillus cereus Rock3-28]
Length = 333
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKQKAL-EVSYNTRLPLLSEDSISYRVLLPNGQKAWLRKN 195
>gi|221045354|dbj|BAH14354.1| unnamed protein product [Homo sapiens]
Length = 982
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 64 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 123 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 169
>gi|193786440|dbj|BAG51723.1| unnamed protein product [Homo sapiens]
Length = 1054
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 136 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 194
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 195 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 241
>gi|121714084|ref|XP_001274653.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus clavatus
NRRL 1]
gi|119402806|gb|EAW13227.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus clavatus
NRRL 1]
Length = 242
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
I P+ I N R GPG + VV +Y KG V++V + D
Sbjct: 8 AASIAAILPVVSAYPITGDTVNCRSGPGTSHAVVKSY-KKGEDVKIVCQAPG----TDVK 62
Query: 105 GTIGW 109
G W
Sbjct: 63 GESIW 67
>gi|217960287|ref|YP_002338847.1| NLP/P60 family protein [Bacillus cereus AH187]
gi|222096346|ref|YP_002530403.1| cell wall-associated hydrolase [Bacillus cereus Q1]
gi|229139483|ref|ZP_04268054.1| Polysugar degrading enzyme [Bacillus cereus BDRD-ST26]
gi|217065362|gb|ACJ79612.1| NLP/P60 family protein [Bacillus cereus AH187]
gi|221240404|gb|ACM13114.1| cell wall-associated hydrolase [Bacillus cereus Q1]
gi|228644030|gb|EEL00291.1| Polysugar degrading enzyme [Bacillus cereus BDRD-ST26]
Length = 333
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNKPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|152996099|ref|YP_001340934.1| heat shock protein DnaJ domain-containing protein [Marinomonas sp.
MWYL1]
gi|150837023|gb|ABR70999.1| heat shock protein DnaJ domain protein [Marinomonas sp. MWYL1]
Length = 434
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
LY +PD+ S I+ + L + G W GW++ + I
Sbjct: 264 TTLYAEPDVSSAILQTIPIQSDLQSIKSQGNWLTVRYDGMNGWVQAKNI 312
>gi|313793548|gb|EFS41591.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA1]
gi|313802850|gb|EFS44063.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA2]
gi|314963271|gb|EFT07371.1| NlpC/P60 family protein [Propionibacterium acnes HL082PA1]
gi|315079727|gb|EFT51715.1| NlpC/P60 family protein [Propionibacterium acnes HL053PA2]
gi|327452469|gb|EGE99123.1| NlpC/P60 family protein [Propionibacterium acnes HL092PA1]
Length = 388
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|221040202|dbj|BAH11864.1| unnamed protein product [Homo sapiens]
Length = 982
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 64 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 123 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 169
>gi|229154597|ref|ZP_04282714.1| Uncharacterized cell wall amidase [Bacillus cereus ATCC 4342]
gi|228628995|gb|EEK85705.1| Uncharacterized cell wall amidase [Bacillus cereus ATCC 4342]
Length = 529
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVKEQRADGWLKIVTSKGEK-W-------------TPLKEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 264 ETINQDFTAYELASHSSKVLGTYNAQTV-TIMEESGTWIRIRVGAGFQWVDKNQL 317
>gi|330752710|emb|CBL88174.1| NLP/P60 protein, lipoprotein [uncultured Leeuwenhoekiella sp.]
Length = 249
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + +P Q+ ++ +V G + E +W + EGW+ ++
Sbjct: 11 VPMRSEPAEQAEMINQVLYGEHFKVLEIRKKWSRIRLAHDKYEGWVDNKQ 60
>gi|315083873|gb|EFT55849.1| NlpC/P60 family protein [Propionibacterium acnes HL027PA2]
Length = 388
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|304414237|ref|ZP_07395605.1| hypothetical protein REG_1321 [Candidatus Regiella insecticola
LSR1]
gi|304283451|gb|EFL91847.1| hypothetical protein REG_1321 [Candidatus Regiella insecticola
LSR1]
Length = 206
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
I A+ + + + EK K + GPG Y +V + L G
Sbjct: 6 IVCFAMLIFTISWHSSAEEKRYISDKLITY----------VHSGPGSQYRIVGS-LNVGD 54
Query: 87 PVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
V + V + EN+ QIRD + W+ + LS S
Sbjct: 55 EVTLLSVNQSENYAQIRDAKDRVVWLPLNQLSSSAS 90
>gi|119493854|ref|ZP_01624420.1| hypothetical protein L8106_29200 [Lyngbya sp. PCC 8106]
gi|119452403|gb|EAW33593.1| hypothetical protein L8106_29200 [Lyngbya sp. PCC 8106]
Length = 212
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDG---------TIGWINK 112
S+ N R P + VV L +G V V NW +I DG +GW+N
Sbjct: 139 SKVNIRQNPDLKSEVV-LKLKRGDGVRAVSRRGNWVKIVALVDGFSPNEKFTPFVGWVNN 197
Query: 113 SLLSG 117
++G
Sbjct: 198 RYING 202
>gi|288957091|ref|YP_003447432.1| hypothetical protein AZL_002500 [Azospirillum sp. B510]
gi|288909399|dbj|BAI70888.1| hypothetical protein AZL_002500 [Azospirillum sp. B510]
Length = 150
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
Y +P + +VA + G ++T + +W + G+++ +
Sbjct: 57 TPAYAQPSAGAGVVATLGAGQVVTTLGRVRNSDWVAVKAGSSTGYVRLHLL 107
>gi|225420318|ref|ZP_03762621.1| hypothetical protein CLOSTASPAR_06661 [Clostridium asparagiforme
DSM 15981]
gi|225041135|gb|EEG51381.1| hypothetical protein CLOSTASPAR_06661 [Clostridium asparagiforme
DSM 15981]
Length = 169
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLL 115
I S N R P ++ LTKG V+ VK Y W + ++DG ++ L
Sbjct: 95 ITGSAVNVRKEPSKDARIL-AQLTKGATVDYVKRYSNEWA-VINYDGQEAYVASQYL 149
>gi|217966276|ref|YP_002351954.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes HCC23]
gi|217335546|gb|ACK41340.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes HCC23]
gi|307572119|emb|CAR85298.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes L99]
Length = 508
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 20/120 (16%)
Query: 81 YLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAI--VSPWNRKTNNPIYI 136
Y + L + + W IR+ + IGW+N S L+ + K + +
Sbjct: 229 YTGRNLEISWEAKTGKGLWYFIRENNEDIGWVNSSALNISYHQKEDENVQLTKYVDDLNA 288
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----------WCFGYNLDTE-GWIKKQKI 184
++Y+ P+ + + + G + + + W GW++ K+
Sbjct: 289 HIYRLPNPE----KQFDNGTIAKYDRKALQADKKITRGGYAWFRLSEGGETIGWVRADKL 344
>gi|49479092|ref|YP_036934.1| cell wall-associated hydrolase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49330648|gb|AAT61294.1| cell wall-associated hydrolase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 333
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GWI + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWIPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDMISYRVLLPNGQKAWLRKN 195
>gi|331090196|ref|ZP_08339084.1| hypothetical protein HMPREF1025_02667 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402142|gb|EGG81714.1| hypothetical protein HMPREF1025_02667 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 499
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMY-TVVCTYLTKGLPVEVVKEYE---NWRQIRD 102
+P V + S N R GPG Y + VEV W +++
Sbjct: 427 APAASAGVPFLVKVSISDLNIRKGPGTDYDRTQFIPVGIYTIVEVKSGKGSTAGWGRLK- 485
Query: 103 FDGTIGWIN 111
GWI+
Sbjct: 486 --SGAGWIS 492
>gi|289425645|ref|ZP_06427417.1| NlpC/P60 family protein [Propionibacterium acnes SK187]
gi|289426958|ref|ZP_06428677.1| NlpC/P60 family protein [Propionibacterium acnes J165]
gi|289153946|gb|EFD02639.1| NlpC/P60 family protein [Propionibacterium acnes SK187]
gi|289159780|gb|EFD07965.1| NlpC/P60 family protein [Propionibacterium acnes J165]
gi|313763339|gb|EFS34703.1| NlpC/P60 family protein [Propionibacterium acnes HL013PA1]
gi|313806295|gb|EFS44811.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA2]
gi|313815007|gb|EFS52721.1| NlpC/P60 family protein [Propionibacterium acnes HL059PA1]
gi|313819484|gb|EFS57198.1| NlpC/P60 family protein [Propionibacterium acnes HL046PA2]
gi|313821214|gb|EFS58928.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA1]
gi|313822332|gb|EFS60046.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA2]
gi|313826110|gb|EFS63824.1| NlpC/P60 family protein [Propionibacterium acnes HL063PA1]
gi|313829403|gb|EFS67117.1| NlpC/P60 family protein [Propionibacterium acnes HL063PA2]
gi|313838205|gb|EFS75919.1| NlpC/P60 family protein [Propionibacterium acnes HL086PA1]
gi|314916707|gb|EFS80538.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA4]
gi|314919167|gb|EFS82998.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA1]
gi|314921247|gb|EFS85078.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA3]
gi|314926053|gb|EFS89884.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA3]
gi|314930325|gb|EFS94156.1| NlpC/P60 family protein [Propionibacterium acnes HL067PA1]
gi|314956108|gb|EFT00504.1| NlpC/P60 family protein [Propionibacterium acnes HL027PA1]
gi|314959726|gb|EFT03828.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA1]
gi|314962215|gb|EFT06316.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA2]
gi|314979396|gb|EFT23490.1| NlpC/P60 family protein [Propionibacterium acnes HL072PA2]
gi|314986372|gb|EFT30464.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA2]
gi|314988533|gb|EFT32624.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA3]
gi|315080979|gb|EFT52955.1| NlpC/P60 family protein [Propionibacterium acnes HL078PA1]
gi|315085094|gb|EFT57070.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA3]
gi|315089523|gb|EFT61499.1| NlpC/P60 family protein [Propionibacterium acnes HL072PA1]
gi|315098135|gb|EFT70111.1| NlpC/P60 family protein [Propionibacterium acnes HL059PA2]
gi|315107969|gb|EFT79945.1| NlpC/P60 family protein [Propionibacterium acnes HL030PA1]
gi|315108873|gb|EFT80849.1| NlpC/P60 family protein [Propionibacterium acnes HL030PA2]
gi|327325678|gb|EGE67475.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA3]
gi|327447604|gb|EGE94258.1| NlpC/P60 family protein [Propionibacterium acnes HL013PA2]
gi|327451747|gb|EGE98401.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA3]
gi|327452252|gb|EGE98906.1| NlpC/P60 family protein [Propionibacterium acnes HL083PA2]
gi|328752290|gb|EGF65906.1| NlpC/P60 family protein [Propionibacterium acnes HL025PA2]
gi|328755404|gb|EGF69020.1| NlpC/P60 family protein [Propionibacterium acnes HL020PA1]
gi|328756978|gb|EGF70594.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA1]
gi|332676359|gb|AEE73175.1| putative cell wall-associated hydrolase [Propionibacterium acnes
266]
Length = 388
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|269925690|ref|YP_003322313.1| 3D domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789350|gb|ACZ41491.1| 3D domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 260
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVK-----EYENWRQIR--DFDGTIGWINKSL 114
+ R+GPG+ Y + T + +G V VV + W ++ D G GW
Sbjct: 50 GAGLRVRVGPGLRYDKLTT-MREGQVVTVVAGPIWSDGYGWYKVTGYDSAGNAGWAAGWW 108
Query: 115 L 115
L
Sbjct: 109 L 109
>gi|295131489|ref|YP_003582152.1| NlpC/P60 family protein [Propionibacterium acnes SK137]
gi|291375585|gb|ADD99439.1| NlpC/P60 family protein [Propionibacterium acnes SK137]
gi|313773384|gb|EFS39350.1| NlpC/P60 family protein [Propionibacterium acnes HL074PA1]
gi|313810719|gb|EFS48433.1| NlpC/P60 family protein [Propionibacterium acnes HL083PA1]
gi|313831022|gb|EFS68736.1| NlpC/P60 family protein [Propionibacterium acnes HL007PA1]
gi|313833155|gb|EFS70869.1| NlpC/P60 family protein [Propionibacterium acnes HL056PA1]
gi|314973907|gb|EFT18003.1| NlpC/P60 family protein [Propionibacterium acnes HL053PA1]
gi|314976834|gb|EFT20929.1| NlpC/P60 family protein [Propionibacterium acnes HL045PA1]
gi|314985041|gb|EFT29133.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA1]
gi|315097743|gb|EFT69719.1| NlpC/P60 family protein [Propionibacterium acnes HL038PA1]
gi|327330874|gb|EGE72619.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA2]
gi|327443362|gb|EGE90016.1| NlpC/P60 family protein [Propionibacterium acnes HL043PA2]
gi|327446511|gb|EGE93165.1| NlpC/P60 family protein [Propionibacterium acnes HL043PA1]
gi|328761592|gb|EGF75109.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL099PA1]
Length = 388
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|118593415|ref|ZP_01550799.1| hypothetical protein SIAM614_00872 [Stappia aggregata IAM 12614]
gi|118434093|gb|EAV40750.1| hypothetical protein SIAM614_00872 [Stappia aggregata IAM 12614]
Length = 176
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P +V + +TI C+ + WC GW+ +
Sbjct: 20 TVSNLNMRAGPGTAFPVVNVLPVHAGVTIYGCNVDTSWCDVGFGRGRGWVSASYL 74
>gi|314969817|gb|EFT13915.1| NlpC/P60 family protein [Propionibacterium acnes HL037PA1]
Length = 388
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|313472687|ref|ZP_07813176.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Lactobacillus
jensenii 1153]
gi|239529349|gb|EEQ68350.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Lactobacillus
jensenii 1153]
Length = 651
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 16/91 (17%)
Query: 108 GWINKSLLSGKRS----AIVSPWNRKTNNPIYINLYKKP-----DIQSIIVAKVEPG--- 155
GWIN SLL+G + + N +Y + S +V ++ G
Sbjct: 189 GWINGSLLTGSSTQATTTEKAGTTTDAGNAAIKVVYTSAIAEWKNPGSGVVGYLQKGTTQ 248
Query: 156 -VLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
V+ I+ W + + W+ + ++
Sbjct: 249 TVVGKIQVNGAWWYKLSSGN---WVPGEYVY 276
>gi|225552213|ref|ZP_03773153.1| conserved hypothetical protein [Borrelia sp. SV1]
gi|225371211|gb|EEH00641.1| conserved hypothetical protein [Borrelia sp. SV1]
Length = 667
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 16 KYMPKILQNSLIFTL--AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ K L+ +IF L A+ F + +E++ IK + P
Sbjct: 566 RFLAKNLKKIIIFLLFSAVCFTMFETYYFYYEQQSEVGI-------IKGDLVSLYKVPD- 617
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
++ +L V ++ +++ I G GWI+K+ +
Sbjct: 618 NFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGWIHKNFV 659
>gi|152983449|ref|YP_001352678.1| hypothetical protein mma_0988 [Janthinobacterium sp. Marseille]
gi|151283526|gb|ABR91936.1| Hypothetical protein mma_0988 [Janthinobacterium sp. Marseille]
Length = 387
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ Y N+ + + QS I+ +V+ G + EW G+I + +I
Sbjct: 325 DDPDGYTNVRAQANGQSAIIGRVKSGNSFQTHPQNSEWWKVQVAGGNTGFIHRSRI 380
>gi|149371421|ref|ZP_01890907.1| lipoprotein; possible cell wall-associated hydrolase [unidentified
eubacterium SCB49]
gi|149355559|gb|EDM44118.1| lipoprotein; possible cell wall-associated hydrolase [unidentified
eubacterium SCB49]
Length = 249
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQK 183
+ L +P S +V++V G I E +W EGWI ++
Sbjct: 11 VPLRLEPADTSEMVSQVLYGESFKILEQRKKWSKIRLAFDKYEGWIDNKQ 60
>gi|321313122|ref|YP_004205409.1| exported N-acetylglucosaminidase [Bacillus subtilis BSn5]
gi|320019396|gb|ADV94382.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus subtilis BSn5]
Length = 880
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R P + T V KG V+++ + W +I +GW N S S +
Sbjct: 634 TVTADVLNIRSTPEVSPTNVIGQFKKGDKVKIIGQINGWAKI-----NLGWRNAS--SDE 686
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
V P N ++ Y K + V +V VL
Sbjct: 687 VVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEVNQKVLA 726
>gi|254975587|ref|ZP_05272059.1| hypothetical protein CdifQC_09769 [Clostridium difficile QCD-66c26]
gi|255092975|ref|ZP_05322453.1| hypothetical protein CdifC_10034 [Clostridium difficile CIP 107932]
gi|255314716|ref|ZP_05356299.1| hypothetical protein CdifQCD-7_10227 [Clostridium difficile
QCD-76w55]
gi|255517390|ref|ZP_05385066.1| hypothetical protein CdifQCD-_09811 [Clostridium difficile
QCD-97b34]
gi|255650497|ref|ZP_05397399.1| hypothetical protein CdifQCD_09971 [Clostridium difficile
QCD-37x79]
gi|260683607|ref|YP_003214892.1| hypothetical protein CD196_1871 [Clostridium difficile CD196]
gi|260687267|ref|YP_003218401.1| hypothetical protein CDR20291_1914 [Clostridium difficile R20291]
gi|306520458|ref|ZP_07406805.1| hypothetical protein CdifQ_11511 [Clostridium difficile QCD-32g58]
gi|260209770|emb|CBA63575.1| hypothetical protein CD196_1871 [Clostridium difficile CD196]
gi|260213284|emb|CBE04830.1| hypothetical protein CDR20291_1914 [Clostridium difficile R20291]
Length = 161
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKR 119
+ N R P I ++ + +G V++ W ++ + GW+ L + K
Sbjct: 22 KLNLREKPDIN-SLKLKSIPEGKIVKLKCVDGIWAEVE-SNYDKGWLLYKYLERLSNAKN 79
Query: 120 SAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + NRK N N + + L ++S ++ + G + + G+W
Sbjct: 80 NSNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKVITTIPDGFKVEVCYSVGKWARVNI 139
Query: 173 LD----TEGWIKKQKI 184
G++ Q I
Sbjct: 140 NKNEKRYSGYVYNQYI 155
>gi|254500881|ref|ZP_05113032.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222436952|gb|EEE43631.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 869
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVV--KEYENWRQIRDFDGTIGWINKSLLSG 117
+ + N R GPG + + T + G PVE+ + W + ++G G+++ + L
Sbjct: 16 VTTANVNFRQGPGTGFGSLGT-VPNGTPVELQDCDDTGAWCSVT-YNGQNGFVSGNYLQL 73
Query: 118 KRSAIVSPWNRKTNNPIYINL 138
+ + W R + L
Sbjct: 74 TEAEDTTGWPRTYDTDAGATL 94
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+N + P + V G + +++C G WC G++ +
Sbjct: 17 TTANVNFRQGPGTGFGSLGTVPNGTPVELQDCDDTGAWCSVTYNGQNGFVSGNYL 71
>gi|126699598|ref|YP_001088495.1| hypothetical protein CD1990 [Clostridium difficile 630]
gi|255101121|ref|ZP_05330098.1| hypothetical protein CdifQCD-6_09959 [Clostridium difficile
QCD-63q42]
gi|255306988|ref|ZP_05351159.1| hypothetical protein CdifA_10397 [Clostridium difficile ATCC 43255]
gi|115251035|emb|CAJ68865.1| putative protein with SH3 domain [Clostridium difficile]
Length = 161
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL----SGKR 119
+ N R P I ++ + +G V++ W ++ + GW+ L + K
Sbjct: 22 KLNLREKPDIN-SLKLKSIPEGKIVKLKCVDGIWAEVE-SNYDKGWLLYKYLERLSNAKN 79
Query: 120 SAIVSPWNRKTN-------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + NRK N N + + L ++S ++ + G + + G+W
Sbjct: 80 NSNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKVITTIPDGFKVEVCYSVGKWARVNI 139
Query: 173 LD----TEGWIKKQKI 184
G++ Q I
Sbjct: 140 NKNEKRYSGYVYNQYI 155
>gi|229136659|ref|ZP_04265328.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
gi|228646801|gb|EEL02967.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
Length = 200
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SLLSGKR 119
N R GP V+ L +G +V + NW + G WI SGK
Sbjct: 72 VNLRSGPSTSNVVI-RQLEQGESYKVWGKLGNWLNL----GGNQWIYHDSSYIRYNSGKD 126
Query: 120 SAIVSPWNRKTNNPIYINLYKKP 142
+I+ R + +N Y +P
Sbjct: 127 ESII--GKRVESKVNSLNYYNRP 147
>gi|158338413|ref|YP_001519590.1| N-acetylmuramoyl-L-alanine amidase [Acaryochloris marina MBIC11017]
gi|158308654|gb|ABW30271.1| N-acetylmuramoyl-L-alanine amidase [Acaryochloris marina MBIC11017]
Length = 580
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + + + +R GP Y+ + T L KG + W ++ D+ WI
Sbjct: 228 IEVTSDQGVARTGPSTNYSRL-TPLPKGTQARITGREGEWLRL-DY---GAWIKAK 278
>gi|89891305|ref|ZP_01202811.1| putative cell wall-associated hydrolase (invasion-associated
proteins), NlpC/P60 family [Flavobacteria bacterium
BBFL7]
gi|89516336|gb|EAS18997.1| putative cell wall-associated hydrolase (invasion-associated
proteins), NlpC/P60 family [Flavobacteria bacterium
BBFL7]
Length = 248
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
L + S +V++V G I E +W + EGW+ ++I
Sbjct: 11 APLRLEAKDTSEMVSQVLYGEYFKIIEERKKWVKIRLAHDSYEGWVDIKQI 61
>gi|317498460|ref|ZP_07956755.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894354|gb|EFV16541.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 225
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 24/70 (34%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 28 ASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGNK 87
Query: 176 EGWIKKQKIW 185
G+ K+ ++
Sbjct: 88 TGYALKKYVY 97
>gi|40788251|dbj|BAA24848.2| KIAA0418 [Homo sapiens]
Length = 989
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 71 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 129
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 130 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 176
>gi|118097320|ref|XP_425197.2| PREDICTED: similar to SH3 and PX domains 2B [Gallus gallus]
Length = 845
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L + + Y +Y
Sbjct: 156 GQLVDIIEKNESGWWFVSTSE-EQGWVPATCLEAQDGVQDELSMQPDEEEKYTVIYPY-T 213
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ ++ G ++ + + + W EGW +
Sbjct: 214 ARDQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 255
>gi|50843410|ref|YP_056637.1| putative cell wall-associated hydrolase [Propionibacterium acnes
KPA171202]
gi|50841012|gb|AAT83679.1| putative cell wall-associated hydrolase [Propionibacterium acnes
KPA171202]
Length = 415
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 148 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 205
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 206 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 265
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 266 RGRTLWASSKYL 277
>gi|99078430|ref|YP_611688.1| NLP/P60 [Ruegeria sp. TM1040]
gi|99035568|gb|ABF62426.1| NLP/P60 [Ruegeria sp. TM1040]
Length = 246
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 85 GLPVEVVKEYENWRQIR-DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G VE++ + W +R + DG GW+ + L+ + + + Y K D
Sbjct: 28 GDTVEILATSDGWCHLRAEKDGYQGWVPGTALAEPLT------PTHWVSAPATHAYTKAD 81
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+S + + G + + G + +G++ +
Sbjct: 82 FKSPDLVSLSLGSQVVVSGSEGRFAQTD----QGFVPLAHL 118
>gi|302338810|ref|YP_003804016.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635995|gb|ADK81422.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 131
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 23/115 (20%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEK--EIFEKKPLP---------RFVTIKASRANSRIG 70
++ + L I ++ I S + E LP R+ I +S R G
Sbjct: 1 MRRDFLTLLYIPVFVFGIFLGSCGRSEEPMPNLELPPTPILESRARYAVIISSHLRLRSG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKE----------YENWRQIRDFDGTIGWINKSLL 115
P I V L KG +EVV + W Q+ +DG G++ L
Sbjct: 61 PSIESKVK-ETLWKGSVMEVVGKASSRVVVDNQEGYWYQV-AYDGLQGYVFGGYL 113
>gi|253699112|ref|YP_003020301.1| hypothetical protein GM21_0463 [Geobacter sp. M21]
gi|251773962|gb|ACT16543.1| protein of unknown function DUF1058 [Geobacter sp. M21]
Length = 167
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
G + VV+ W +++ DG GW+ +S
Sbjct: 50 GAELTVVEGAGRWLKVQSADGKEGWVYAGRVSDT 83
>gi|42781934|ref|NP_979181.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
gi|42737858|gb|AAS41789.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
Length = 333
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|221040938|dbj|BAH12146.1| unnamed protein product [Homo sapiens]
Length = 978
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 60 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 118
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 119 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 165
>gi|75758399|ref|ZP_00738522.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74494125|gb|EAO57218.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 327
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 32/140 (22%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----- 112
V I + N R VV + KG + + G W++
Sbjct: 192 VEILVAELNVRESASFDSRVV-KTVKKGETYQTWGLSNGLYNV----GGNQWVSAGPAYV 246
Query: 113 -------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
L+GKR+ I K +N+ KP I+ + G
Sbjct: 247 KFTPAGSSSNGTPEDLAGKRNPI-----GKITTTANLNVRTKPSTDGDIIRTISSGDTWN 301
Query: 160 IRECSGEWCFGYNLDTEGWI 179
I + SG W + +GW+
Sbjct: 302 IYDISGGWARVH----DGWV 317
>gi|294497263|ref|YP_003560963.1| hypothetical protein BMQ_0468 [Bacillus megaterium QM B1551]
gi|294347200|gb|ADE67529.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 337
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 11/109 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ E +W ++ R+ G GW+ L+ KR +
Sbjct: 93 GNKVTVLDEQGDWVKVAVDGQPTSRNELGYPGWMPTKQLTYSKRYEQYAKKPFVMVTAPT 152
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQK 183
LY P ++ + +V L + + + WI +
Sbjct: 153 TYLYHSPSLKKKGI-EVSYNTRLPLLAKSKSAYKVLKPNGKTAWISTKA 200
>gi|229161716|ref|ZP_04289695.1| Polysugar degrading enzyme [Bacillus cereus R309803]
gi|228621683|gb|EEK78530.1| Polysugar degrading enzyme [Bacillus cereus R309803]
Length = 333
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVIDKRGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDAISYRVLLPNGQKAWLRKN 195
>gi|227873769|ref|ZP_03991998.1| glycoside hydrolase family protein [Oribacterium sinus F0268]
gi|227840385|gb|EEJ50786.1| glycoside hydrolase family protein [Oribacterium sinus F0268]
Length = 579
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ A A R+ G+ ++ T + KG V V+++ E W ++ DG IG++ S L
Sbjct: 184 ATLTAKEA-VRVQGGVKSPIL-TDMEKGDKVLVLEKMEKWSKVETKDGFIGYLRNSRLGD 241
Query: 118 K 118
+
Sbjct: 242 E 242
>gi|313813641|gb|EFS51355.1| NlpC/P60 family protein [Propionibacterium acnes HL025PA1]
Length = 388
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 QGRTLWASSKYL 250
>gi|291486144|dbj|BAI87219.1| N-acetylglucosaminidase [Bacillus subtilis subsp. natto BEST195]
Length = 880
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R P + T V KG V+++ + W +I +GW N S S +
Sbjct: 634 TVTADVLNIRSTPEVSPTNVIGQFKKGDKVKIIGQINGWAKI-----NLGWRNAS--SDE 686
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
V P N ++ Y K + V +V VL
Sbjct: 687 VVQYVDPNNFTRDSKYYFQFLKLSQTAGLSVTEVNQKVLA 726
>gi|332212742|ref|XP_003255478.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 3
[Nomascus leucogenys]
Length = 978
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 82 LTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLL---SGKRSAIVSPWNRKTNNPIYIN 137
L G V+V+++ E W + + GW+ + L +G R ++ Y+
Sbjct: 60 LQAGEVVDVIEKNESGWWFVSTSE-EQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 118
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + E GV + + + W + L EGW +
Sbjct: 119 VQPYTSQSKDEIG-FEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 165
>gi|261751372|ref|ZP_05995081.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261741125|gb|EEY29051.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
Length = 247
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 6 VNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 54
>gi|221314949|ref|ZP_03596754.1| hypothetical protein BsubsN3_14632 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319871|ref|ZP_03601165.1| hypothetical protein BsubsJ_14548 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|1934627|gb|AAB80879.1| YraJ [Bacillus subtilis subsp. subtilis str. 168]
gi|2108278|emb|CAA63452.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
Length = 120
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 9/57 (15%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + L +A F + + P N R GPG Y ++
Sbjct: 8 MLSMLTVMIASLFIFSSQALAVQYFTVSTSSGAP---------VNMRSGPGTNYPIM 55
>gi|194219601|ref|XP_001499665.2| PREDICTED: SH3 and PX domains 2B [Equus caballus]
Length = 900
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L G+ + Y +Y
Sbjct: 167 GQVVDIIEKNESGWWFVSTAE-EQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-T 224
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 225 ARDQDEMNLERGAMVEVIQKNLEGWWKIRYQGKEGWAPASYL 266
>gi|326928378|ref|XP_003210357.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Meleagris
gallopavo]
Length = 845
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 85 GLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+++++ E W + + GW+ + L + + Y +Y
Sbjct: 153 GQLVDIIEKNESGWWFVSTSE-EQGWVPATCLEAQDGVQDELSMQPDEEEKYTVIYPY-T 210
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ ++ G ++ + + + W EGW +
Sbjct: 211 ARDQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 252
>gi|307103028|gb|EFN51293.1| hypothetical protein CHLNCDRAFT_141234 [Chlorella variabilis]
Length = 1327
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
G VEV++E + W +RD G G + S L
Sbjct: 1022 GDKVEVLEEADGWMLVRDPGGREGLVPTSYL 1052
>gi|323446939|gb|EGB02933.1| hypothetical protein AURANDRAFT_68433 [Aureococcus anophagefferens]
Length = 561
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E PR + N R P + V L +G V + NW Q+ +G
Sbjct: 32 ARPEPSKFPRDYEVVYDSVNVREAPRLTAKTVGA-LPRGSVVTAARAQGNWVQLEAANGN 90
Query: 107 IG-WI 110
G WI
Sbjct: 91 AGRWI 95
>gi|220928278|ref|YP_002505187.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
gi|219998606|gb|ACL75207.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
Length = 108
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ R K + +++ T+ + L P+ ++ + + VT + S N R GP
Sbjct: 1 MGTRIISRKFILLAVLVTMLVINVLFPLSQVNAQTWVLT-------VTTEGSNLNVRSGP 53
Query: 72 GIMYTVVCTY 81
G Y+V+ +
Sbjct: 54 GTNYSVIGQF 63
>gi|206973575|ref|ZP_03234493.1| NLP/P60 family protein [Bacillus cereus H3081.97]
gi|206747731|gb|EDZ59120.1| NLP/P60 family protein [Bacillus cereus H3081.97]
Length = 333
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|328913642|gb|AEB65238.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus amyloliquefaciens LL3]
Length = 873
Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
T+ A N R P + + L KG V ++ + W ++ ++GW N S
Sbjct: 625 TVTADVLNVRSTPEVSSGNIIGQLKKGDKVSIIGQTNGWAKL-----SMGWRNAS 674
>gi|308175307|ref|YP_003922012.1| N-acetylglucosaminidase [Bacillus amyloliquefaciens DSM 7]
gi|307608171|emb|CBI44542.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus amyloliquefaciens DSM 7]
gi|328555280|gb|AEB25772.1| N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus
amyloliquefaciens TA208]
Length = 881
Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
T+ A N R P + + L KG V ++ + W ++ ++GW N S
Sbjct: 633 TVTADVLNVRSTPEVSSGNIIGQLKKGDKVSIIGQTNGWAKL-----SMGWRNAS 682
>gi|291560932|emb|CBL39732.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 213
Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 24/70 (34%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 16 ASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGNK 75
Query: 176 EGWIKKQKIW 185
G+ K+ ++
Sbjct: 76 TGYALKKYVY 85
>gi|269102488|ref|ZP_06155185.1| hypothetical protein VDA_001914 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162386|gb|EEZ40882.1| hypothetical protein VDA_001914 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 209
Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQ 182
W N+ I +Y +P+ QS ++ K+ L +W + GW+K
Sbjct: 21 VWAANNNDVGNITIYSQPNAQSKVIEKINGDAPLMTIFIDKDWSKVGDPSNGQTGWVKNS 80
Query: 183 KI 184
+
Sbjct: 81 DM 82
>gi|229173499|ref|ZP_04301042.1| Polysugar degrading enzyme [Bacillus cereus MM3]
gi|228609881|gb|EEK67160.1| Polysugar degrading enzyme [Bacillus cereus MM3]
Length = 333
Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|228984087|ref|ZP_04144273.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775615|gb|EEM23995.1| Uncharacterized cell wall amidase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 529
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 17/115 (14%)
Query: 71 PGIMYTVVCTYLTKGLPVEV-VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P + + + VEV + + W +I G W +
Sbjct: 219 PSLSSGITDVQHKPQM-VEVKEQRADGWLKIVTSKGEK-W-------------TPLKEKT 263
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ S ++ + TI E SG W W+ K ++
Sbjct: 264 ETINQDFTAYELASHSSKVLGTYNAQTV-TIMEESGRWIRIRVGAGFQWVDKNQL 317
>gi|225852254|ref|YP_002732487.1| SH3 type 3 domain-containing protein [Brucella melitensis ATCC
23457]
gi|256264239|ref|ZP_05466771.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|225640619|gb|ACO00533.1| SH3 type 3 domain protein [Brucella melitensis ATCC 23457]
gi|263094483|gb|EEZ18305.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326408759|gb|ADZ65824.1| SH3 type 3 domain-containing protein [Brucella melitensis M28]
gi|326538477|gb|ADZ86692.1| SH3 type 3 domain protein [Brucella melitensis M5-90]
Length = 170
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 15/124 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSG 117
I + N R GPG Y V + G PV V W Q+ ++ GW + L+
Sbjct: 26 ISTTNLNVRTGPGTGYAAVGA-IPSGAPVNVRGCTSGYGWCQV-NYGNMFGWASSRYLAM 83
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYNLD 174
+ + I + ++A V G L R G W +
Sbjct: 84 REGSASGYSGDFGQTAALIGI--------PLIAGVAIGAALNDRHDRWDRGYWHRHRHWR 135
Query: 175 TEGW 178
GW
Sbjct: 136 RSGW 139
>gi|30262816|ref|NP_845193.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47528142|ref|YP_019491.1| NLP/P60 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49185665|ref|YP_028917.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|165868719|ref|ZP_02213379.1| NLP/P60 family protein [Bacillus anthracis str. A0488]
gi|167631755|ref|ZP_02390082.1| NLP/P60 family protein [Bacillus anthracis str. A0442]
gi|170685174|ref|ZP_02876398.1| NLP/P60 family protein [Bacillus anthracis str. A0465]
gi|170704876|ref|ZP_02895342.1| NLP/P60 family protein [Bacillus anthracis str. A0389]
gi|177649788|ref|ZP_02932790.1| NLP/P60 family protein [Bacillus anthracis str. A0174]
gi|190565392|ref|ZP_03018312.1| NLP/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|227814339|ref|YP_002814348.1| NLP/P60 family protein [Bacillus anthracis str. CDC 684]
gi|229600622|ref|YP_002867119.1| NLP/P60 family protein [Bacillus anthracis str. A0248]
gi|254685411|ref|ZP_05149271.1| NLP/P60 family protein [Bacillus anthracis str. CNEVA-9066]
gi|254737868|ref|ZP_05195571.1| NLP/P60 family protein [Bacillus anthracis str. Western North
America USA6153]
gi|254742960|ref|ZP_05200645.1| NLP/P60 family protein [Bacillus anthracis str. Kruger B]
gi|254752183|ref|ZP_05204220.1| NLP/P60 family protein [Bacillus anthracis str. Vollum]
gi|254760701|ref|ZP_05212725.1| NLP/P60 family protein [Bacillus anthracis str. Australia 94]
gi|30257449|gb|AAP26679.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47503290|gb|AAT31966.1| NLP/P60 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49179592|gb|AAT54968.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|164715445|gb|EDR20962.1| NLP/P60 family protein [Bacillus anthracis str. A0488]
gi|167532053|gb|EDR94689.1| NLP/P60 family protein [Bacillus anthracis str. A0442]
gi|170130677|gb|EDS99538.1| NLP/P60 family protein [Bacillus anthracis str. A0389]
gi|170670534|gb|EDT21273.1| NLP/P60 family protein [Bacillus anthracis str. A0465]
gi|172084862|gb|EDT69920.1| NLP/P60 family protein [Bacillus anthracis str. A0174]
gi|190563419|gb|EDV17384.1| NLP/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|227005845|gb|ACP15588.1| NLP/P60 family protein [Bacillus anthracis str. CDC 684]
gi|229265030|gb|ACQ46667.1| NLP/P60 family protein [Bacillus anthracis str. A0248]
Length = 333
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|322831347|ref|YP_004211374.1| SH3 domain protein [Rahnella sp. Y9602]
gi|321166548|gb|ADW72247.1| SH3 domain protein [Rahnella sp. Y9602]
Length = 206
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+Q + A+ A + EK + GPG Y +V T
Sbjct: 1 MQKLRLIGFALLGLSMTWGAHADEKRYISDDLITY----------IHSGPGNQYRIVGT- 49
Query: 82 LTKGLPVEV--VKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
L G V + V + + +I D G WI LS S
Sbjct: 50 LNAGEEVTLRSVNDSTKYGEIVDSKGKTAWIPLDQLSNVPS 90
>gi|291556598|emb|CBL33715.1| CHAP domain./Bacterial SH3 domain./Fibronectin type III domain
[Eubacterium siraeum V10Sc8a]
Length = 990
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 16/83 (19%)
Query: 46 KEIFEKKPLPRFVTIKAS---RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WR 98
+ + P P T K + N R GPG Y VV Y G V + ++ + W
Sbjct: 346 RPPYSSNPQPNQETWKVNVSQGVNVRSGPGTNYGVVKAY-PNGTTVTITEKTSSGGYTWG 404
Query: 99 QIRDFDGTIGWI---NKSLLSGK 118
+ D GW+ LSG
Sbjct: 405 KCGD-----GWLVLDYCQYLSGS 422
>gi|229018162|ref|ZP_04175035.1| Polysugar degrading enzyme [Bacillus cereus AH1273]
gi|229024342|ref|ZP_04180798.1| Polysugar degrading enzyme [Bacillus cereus AH1272]
gi|228736969|gb|EEL87508.1| Polysugar degrading enzyme [Bacillus cereus AH1272]
gi|228743087|gb|EEL93214.1| Polysugar degrading enzyme [Bacillus cereus AH1273]
Length = 333
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|167767880|ref|ZP_02439933.1| hypothetical protein CLOSS21_02421 [Clostridium sp. SS2/1]
gi|167710209|gb|EDS20788.1| hypothetical protein CLOSS21_02421 [Clostridium sp. SS2/1]
Length = 225
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 24/70 (34%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 28 ASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGNK 87
Query: 176 EGWIKKQKIW 185
G+ K+ ++
Sbjct: 88 TGYALKKYVY 97
>gi|65320142|ref|ZP_00393101.1| COG0791: Cell wall-associated hydrolases (invasion-associated
proteins) [Bacillus anthracis str. A2012]
Length = 333
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|324326821|gb|ADY22081.1| cell wall-associated hydrolase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 333
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|228915447|ref|ZP_04079036.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844094|gb|EEM89154.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 333
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|221310626|ref|ZP_03592473.1| hypothetical protein Bsubs1_14716 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221324151|ref|ZP_03605445.1| hypothetical protein BsubsS_14687 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767620|ref|NP_390569.2| hypothetical protein BSU26920 [Bacillus subtilis subsp. subtilis
str. 168]
gi|321312202|ref|YP_004204489.1| hypothetical protein BSn5_04160 [Bacillus subtilis BSn5]
gi|238054346|sp|O07934|YRAJ_BACSU RecName: Full=Uncharacterized protein yraJ; Flags: Precursor
gi|225185248|emb|CAB14633.2| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485090|dbj|BAI86165.1| hypothetical protein BSNT_03905 [Bacillus subtilis subsp. natto
BEST195]
gi|320018476|gb|ADV93462.1| hypothetical protein BSn5_04160 [Bacillus subtilis BSn5]
Length = 118
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 9/57 (15%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + L +A F + + P N R GPG Y ++
Sbjct: 6 MLSMLTVMIASLFIFSSQALAVQYFTVSTSSGAP---------VNMRSGPGTNYPIM 53
>gi|52142663|ref|YP_084166.1| cell wall-associated hydrolase [Bacillus cereus E33L]
gi|196032671|ref|ZP_03100085.1| NLP/P60 family protein [Bacillus cereus W]
gi|228946461|ref|ZP_04108779.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229122396|ref|ZP_04251609.1| Polysugar degrading enzyme [Bacillus cereus 95/8201]
gi|51976132|gb|AAU17682.1| cell wall-associated hydrolase [Bacillus cereus E33L]
gi|195995422|gb|EDX59376.1| NLP/P60 family protein [Bacillus cereus W]
gi|228660957|gb|EEL16584.1| Polysugar degrading enzyme [Bacillus cereus 95/8201]
gi|228813209|gb|EEM59512.1| Polysugar degrading enzyme [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 333
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|254722820|ref|ZP_05184608.1| cell wall-associated hydrolase [Bacillus anthracis str. A1055]
Length = 333
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|241889006|ref|ZP_04776310.1| bacterial SH3 domain protein [Gemella haemolysans ATCC 10379]
gi|241864255|gb|EER68633.1| bacterial SH3 domain protein [Gemella haemolysans ATCC 10379]
Length = 302
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 12/73 (16%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CSGEWCFGYNL 173
R+A V P + +NL + S I+ + G +TIR W +
Sbjct: 237 RTAYVKPS-------VGVNLRSDKNDSSRIITSIRGGAAVTIRSLETNSAGEAWAYVDYG 289
Query: 174 DTEGWIKKQKIWG 186
G+I+ I G
Sbjct: 290 SYTGYIRGDLISG 302
>gi|228902793|ref|ZP_04066939.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228856867|gb|EEN01381.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 234
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
VTI A R GPG Y +V + +G + W + G W++ +
Sbjct: 178 VTITADVLRVRTGPGTNYDIV-KKVYRGERYQSWGIQNGWYNV----GGDQWVSGEYV 230
>gi|296444980|ref|ZP_06886941.1| hypothetical protein MettrDRAFT_0657 [Methylosinus trichosporium
OB3b]
gi|296257401|gb|EFH04467.1| hypothetical protein MettrDRAFT_0657 [Methylosinus trichosporium
OB3b]
Length = 112
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ +LL+G SAI P P + + + + P ++ +R G W
Sbjct: 9 VAVALLAGAGSAIAGPRIVTDLAAF----RSGPGVTFMPILAIPPKTVVEVRGHIGGWSR 64
Query: 170 GYNLDTEGWIKKQKI 184
G++ +
Sbjct: 65 VVYAGNVGFVASSLL 79
>gi|294508598|ref|YP_003572657.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
gi|294344927|emb|CBH25705.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
Length = 378
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
S + + R L P + + GVL+ W GW
Sbjct: 310 SYMQAQERRAVVVDKEATLRSAPTDTAPADTTLRSGVLVAPGAERKAWTRVRMQGRTGGW 369
Query: 179 IKKQKI 184
I +
Sbjct: 370 IPSGAL 375
>gi|237709935|ref|ZP_04540416.1| BatE [Bacteroides sp. 9_1_42FAA]
gi|229456028|gb|EEO61749.1| BatE [Bacteroides sp. 9_1_42FAA]
Length = 272
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ +L L + +++ + F AI+F+L ILA E + I A
Sbjct: 162 MILALSLFIFGKRVVLKKIGFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTV 221
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWI 110
+ P L +G V + + W++I+ DG +GW+
Sbjct: 222 KSTPNQS-GTDLFILHEGRKVIIKDNTMKEWKEIKLEDGNVGWV 264
>gi|237725398|ref|ZP_04555879.1| aerotolerance-related protein BatE [Bacteroides sp. D4]
gi|265753587|ref|ZP_06088942.1| BatE protein [Bacteroides sp. 3_1_33FAA]
gi|229436085|gb|EEO46162.1| aerotolerance-related protein BatE [Bacteroides dorei 5_1_36/D4]
gi|263235301|gb|EEZ20825.1| BatE protein [Bacteroides sp. 3_1_33FAA]
Length = 272
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ +L L + +++ + F AI+F+L ILA E + I A
Sbjct: 162 MILALSLFIFGKRVVLKKIGFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTV 221
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVK-EYENWRQIRDFDGTIGWI 110
+ P L +G V + + W++I+ DG +GW+
Sbjct: 222 KSTPNQS-GTDLFILHEGRKVIIKDNTMKEWKEIKLEDGNVGWV 264
>gi|118478200|ref|YP_895351.1| cell wall-associated hydrolase [Bacillus thuringiensis str. Al
Hakam]
gi|196043676|ref|ZP_03110914.1| NLP/P60 family protein [Bacillus cereus 03BB108]
gi|225864823|ref|YP_002750201.1| NLP/P60 family protein [Bacillus cereus 03BB102]
gi|229185064|ref|ZP_04312253.1| Polysugar degrading enzyme [Bacillus cereus BGSC 6E1]
gi|118417425|gb|ABK85844.1| cell wall-associated hydrolase [Bacillus thuringiensis str. Al
Hakam]
gi|196025985|gb|EDX64654.1| NLP/P60 family protein [Bacillus cereus 03BB108]
gi|225788582|gb|ACO28799.1| NLP/P60 family protein [Bacillus cereus 03BB102]
gi|228598424|gb|EEK56055.1| Polysugar degrading enzyme [Bacillus cereus BGSC 6E1]
Length = 333
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|327542235|gb|EGF28724.1| Tetratricopeptide repeat protein [Rhodopirellula baltica WH47]
Length = 964
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT--V 77
S +A++ + LA++ + I + R G + V
Sbjct: 845 ARSAASFFAVMAVFGGVMWWLAITGVSKESTGY-------IVVDQVTVRTGDAESFPALV 897
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ G VE+ + +W IR GW+
Sbjct: 898 EWS-EADGRAVEIAQSRGDWVLIRTPS-ATGWV 928
>gi|315104685|gb|EFT76661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA2]
Length = 343
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI 100
S E+ RF + N R G Y L G + ++ E W +
Sbjct: 57 ASAEQAKRATTYTARFA-LSRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ G W+ ++ + R +N + +
Sbjct: 115 -NYRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRD 154
>gi|228937964|ref|ZP_04100591.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970844|ref|ZP_04131484.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977418|ref|ZP_04137813.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228782395|gb|EEM30578.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228788969|gb|EEM36908.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821755|gb|EEM67756.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938442|gb|AEA14338.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 234
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
VTI A R GPG Y +V + +G + W + G W++ +
Sbjct: 178 VTITADVLRVRTGPGTNYDIV-KKVYRGERYQSWGIQNGWYNV----GGDQWVSGEYV 230
>gi|89053043|ref|YP_508494.1| SH3, type 3 [Jannaschia sp. CCS1]
gi|88862592|gb|ABD53469.1| SH3 type 3 [Jannaschia sp. CCS1]
Length = 206
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIR-DFDGTIGWINKSLL 115
+ A+ N R GP ++ L++G VE + E +NW ++R G G++ L
Sbjct: 146 VAATAVNFREGPSTNTAIL-ASLSRGEEVEFLSEAPDNWARLRVVSSGLEGYMAAQFL 202
>gi|18874094|ref|NP_080422.1| epidermal growth factor receptor kinase substrate 8-like protein 1
[Mus musculus]
gi|81901747|sp|Q8R5F8|ES8L1_MOUSE RecName: Full=Epidermal growth factor receptor kinase substrate
8-like protein 1; Short=EPS8-like protein 1; AltName:
Full=Epidermal growth factor receptor pathway substrate
8-related protein 1; Short=EPS8-related protein 1
gi|18655337|gb|AAL76120.1| epidermal growth factor receptor pathway substrate 8 related
protein 1 [Mus musculus]
gi|26386517|dbj|BAB31756.2| unnamed protein product [Mus musculus]
gi|148699290|gb|EDL31237.1| EPS8-like 1 [Mus musculus]
gi|195934763|gb|AAI68397.1| EPS8-like 1 [synthetic construct]
Length = 716
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 504 LEVLDDRRKWWKVRDHQGQEGYVPYNILT 532
>gi|218708447|ref|YP_002416068.1| SH3 domain protein [Vibrio splendidus LGP32]
gi|218321466|emb|CAV17418.1| SH3 domain protein [Vibrio splendidus LGP32]
Length = 203
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 67 SRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
GP + ++ + + + + Q++D G GW+ +S K S +
Sbjct: 33 MHSGPNNTFRIIGSIDAGEKITYLQTNKSTGYTQVQDNRGRKGWVESKFVSTKESMALRM 92
Query: 126 ----WNRKTNNPIYINLYKKPDIQSIIVA 150
N + D + +A
Sbjct: 93 PKLEKELSEVKGKLANARQSADSEKAGLA 121
>gi|170742967|ref|YP_001771622.1| SH3 type 3 domain-containing protein [Methylobacterium sp. 4-46]
gi|168197241|gb|ACA19188.1| SH3 type 3 domain protein [Methylobacterium sp. 4-46]
Length = 93
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWIKKQ 182
+++ + PD + V + L C+ + WC GW +++
Sbjct: 29 DVPPGDSLSIREAPDAAAPAVGRAPWDARLRGFGCTTDTPSGRTWCRVKYGRIVGWARRK 88
Query: 183 KI 184
+
Sbjct: 89 FL 90
>gi|297277908|ref|XP_001086805.2| PREDICTED: EPS8-like 1 isoform 1 [Macaca mulatta]
Length = 654
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 441 LEVLDDRRKWWKVRDPAGQEGYVPYNILT 469
>gi|228904675|ref|ZP_04068735.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228854965|gb|EEM99563.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 234
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
VTI A R GPG Y +V + +G + W + G W++ +
Sbjct: 178 VTITADVLRVRTGPGTNYDIV-KKVYRGERYQSWGIQNGWYNV----GGDQWVSGEYV 230
>gi|120435860|ref|YP_861546.1| NlpC/P60 family protein [Gramella forsetii KT0803]
gi|117578010|emb|CAL66479.1| NlpC/P60 family protein [Gramella forsetii KT0803]
Length = 250
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQK 183
+ L +S + +++ G + E W N E WI K++
Sbjct: 11 VPLRASASHESEMTSQLLYGEYFKVLEERAHWSRIRNVFDGFEAWIDKKQ 60
>gi|51246254|ref|YP_066138.1| hypothetical protein DP2402 [Desulfotalea psychrophila LSv54]
gi|50877291|emb|CAG37131.1| hypothetical protein DP2402 [Desulfotalea psychrophila LSv54]
Length = 233
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 6/123 (4%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
L+++ L ++LS + + P R+V+ N + YTVV ++
Sbjct: 8 ACLSLFITLLLSISLSSQAIAADNSPQSLRYVS-DFLVINLKNRIERPYTVV-DHIKSNA 65
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P+ V+ E + +R D +GW+ K + + + K L + S
Sbjct: 66 PLTVLGERGKYIHVRTADDKVGWVAKQYTT---TKLPKSLIIKNLEEEISQLKQSQPPAS 122
Query: 147 IIV 149
IV
Sbjct: 123 QIV 125
>gi|313813705|gb|EFS51419.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL025PA1]
gi|327335339|gb|EGE77049.1| lipoprotein A family protein [Propionibacterium acnes HL097PA1]
Length = 343
Score = 34.6 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSL 114
RF + N R G Y L G + ++ E W + ++ G W+
Sbjct: 71 RFA-LTRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV-NYRGKTAWVATRY 127
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ + R +N + +
Sbjct: 128 ITKVNRPVGIYAQRGDHNARSKAVQRD 154
>gi|242279723|ref|YP_002991852.1| lipopolysaccharide transport periplasmic protein LptA
[Desulfovibrio salexigens DSM 2638]
gi|242122617|gb|ACS80313.1| lipopolysaccharide transport periplasmic protein LptA
[Desulfovibrio salexigens DSM 2638]
Length = 541
Score = 34.6 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + +N+ +PD +S+IV K+E G +++ + G+W + + +K+
Sbjct: 311 MAPVKTKTMYATAVLNVRSEPDAKSLIVDKLELGEAVSVGQGEGKWYPVFKPGKDNELKR 370
Query: 182 -QKIWGIY 188
++G Y
Sbjct: 371 VGYVFGTY 378
>gi|157823875|ref|NP_001101937.1| epidermal growth factor receptor kinase substrate 8-like protein 1
[Rattus norvegicus]
gi|149016647|gb|EDL75833.1| EPS8-like 1 (predicted) [Rattus norvegicus]
Length = 717
Score = 34.6 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 505 LEVLDDRRKWWKVRDHQGQEGYVPYNILT 533
>gi|226226935|ref|YP_002761041.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226090126|dbj|BAH38571.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 749
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 3/91 (3%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ A + +A S P V ++ A R+ P L G
Sbjct: 654 RVSVGAALMLVGAGVAASAWWGTSALDPHGLAV-VRRPEA-MRVQPAFDANTAG-GLATG 710
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V + E W ++ DG GW+ LS
Sbjct: 711 DIVRLAAVQEQWARVEHADGRFGWVPAERLS 741
>gi|291569686|dbj|BAI91958.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 571
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 23/93 (24%)
Query: 66 NSRIGPGIMYTVVCTY----------LTKGLPVEVVKEYEN---WRQIRDFDGTIGWINK 112
N R GPG ++V + + +G +E N W +I+ T W++
Sbjct: 432 NIRSGPGTNNSIVGSLIPGHSRTFDAVARGTTHWDAREQRNDNRWFRIQ---NTNQWVSA 488
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
S ++G +N+ P
Sbjct: 489 SFITGNP-------LFSGAADTTLNIRSGPGTN 514
>gi|269925694|ref|YP_003322317.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789354|gb|ACZ41495.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
Length = 242
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ L L ++ + + +P + N R GP I Y+++ +
Sbjct: 1 MKLKLFSCALLIALVLSAVPAVSSKAAGVPGQYAYTTTWLNFRTGPSINYSIMRVLPPQA 60
Query: 86 LPVEVVKEYE-NWRQIRDFDGTIGWINK 112
+ Y W ++ +DG G+++
Sbjct: 61 RVYVISGPYNYEWYRVS-YDGLTGYVHG 87
>gi|188585513|ref|YP_001917058.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350200|gb|ACB84470.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 300
Score = 34.6 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKE--------YENWRQIRDFDG-TIGWINKSLLS 116
N R GPG+ +++ + +G +V+ + Y++W +I DF G W+++ ++
Sbjct: 44 NVRSGPGLSNSLI-DQVHQGETYDVLDKQTNESESYYQDWVKI-DFSGYEEAWVSQDYVN 101
>gi|9507358|ref|NP_040451.1| bacteriocin [Plasmid pIP404]
gi|114874|sp|P08696|BCN5_CLOPE RecName: Full=Bacteriocin BCN5
gi|150737|gb|AAA98248.1| bacteriocin [Plasmid pIP404]
gi|150739|gb|AAA98249.1| bacteriocin [Plasmid pIP404]
Length = 890
Score = 34.6 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
N R G G+ YT L +G V +V + +W +I+
Sbjct: 585 NVREGAGL-YTNSIGQLRQGNKVNIVAKNGDWYKIK 619
>gi|289423663|ref|ZP_06425462.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
gi|289155913|gb|EFD04579.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
Length = 352
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-----ENWRQIRDFDGTIGWINKS 113
+I + AN R GP +++ T + +G V V Y W ++ F GT+GWI+ +
Sbjct: 288 SITSGAANVRTGPSKSSSII-TSIDRGSTVYVEDTYVESADRIWCKVS-FGGTVGWISYN 345
Query: 114 LLS 116
++
Sbjct: 346 TMN 348
>gi|149924701|ref|ZP_01913050.1| carboxyl-terminal protease family protein [Plesiocystis pacifica
SIR-1]
gi|149814428|gb|EDM74020.1| carboxyl-terminal protease family protein [Plesiocystis pacifica
SIR-1]
Length = 1043
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ I+LY P + ++A+ E G +G W D + K +
Sbjct: 836 GEGGVSASAQIDLYAGPYEGAPVLARAEAGASFATTGNAGGWYELRLGKDQVAYAKASAL 895
>gi|220930683|ref|YP_002507592.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|220001011|gb|ACL77612.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 277
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLD 174
+ K A++ P I + ++P + + + G L+ + + W
Sbjct: 158 NEKPEAVIKPEKSIKKAKIQTMVNEQPFDNTAGIGSINAGSLVNVTGKTDNGWYQINLNG 217
Query: 175 TEGWIK 180
G+I+
Sbjct: 218 KTGFIQ 223
>gi|314924447|gb|EFS88278.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL001PA1]
Length = 343
Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI 100
S E+ RF + N R G Y L G + ++ E W +
Sbjct: 57 ASAEQAKRATTYTARFA-LSRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ G W+ ++ + R +N + +
Sbjct: 115 -NYRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRD 154
>gi|282854958|ref|ZP_06264292.1| lipoprotein A-like protein [Propionibacterium acnes J139]
gi|282582104|gb|EFB87487.1| lipoprotein A-like protein [Propionibacterium acnes J139]
gi|314967174|gb|EFT11273.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL082PA2]
gi|314981567|gb|EFT25661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA3]
gi|315092330|gb|EFT64306.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA4]
gi|327328748|gb|EGE70508.1| lipoprotein A family protein [Propionibacterium acnes HL103PA1]
Length = 343
Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI 100
S E+ RF + N R G Y L G + ++ E W +
Sbjct: 57 ASAEQAKRATTYTARFA-LSRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ G W+ ++ + R +N + +
Sbjct: 115 -NYRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRD 154
>gi|261409291|ref|YP_003245532.1| glycoside hydrolase family 18 [Paenibacillus sp. Y412MC10]
gi|261285754|gb|ACX67725.1| glycoside hydrolase family 18 [Paenibacillus sp. Y412MC10]
Length = 604
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
AI + L + + +S IV + G + + W F G++
Sbjct: 199 AIQLAKAAPGKPEDTVALRESGEKKSPIVLDMPAGERIRVWREEEGWLFVQADNGYTGYV 258
Query: 180 KKQKI 184
K++I
Sbjct: 259 LKEQI 263
>gi|148539853|ref|NP_573441.2| epidermal growth factor receptor kinase substrate 8-like protein 1
isoform a [Homo sapiens]
gi|296439363|sp|Q8TE68|ES8L1_HUMAN RecName: Full=Epidermal growth factor receptor kinase substrate
8-like protein 1; Short=EPS8-like protein 1; AltName:
Full=Epidermal growth factor receptor pathway substrate
8-related protein 1; Short=EPS8-related protein 1
gi|119592734|gb|EAW72328.1| EPS8-like 1, isoform CRA_a [Homo sapiens]
Length = 723
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 505 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 533
>gi|18655331|gb|AAL76117.1| epidermal growth factor receptor pathway substrate 8 related
protein 1 [Homo sapiens]
Length = 723
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 505 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 533
>gi|163745056|ref|ZP_02152416.1| hypothetical protein OIHEL45_05695 [Oceanibulbus indolifex HEL-45]
gi|161381874|gb|EDQ06283.1| hypothetical protein OIHEL45_05695 [Oceanibulbus indolifex HEL-45]
Length = 202
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA+ F + AL+ + + T N R P ++ ++ +
Sbjct: 3 LLAVLFCFWALPALATQDAWPALYDVSDVAT--DDVLNVRQAPDAGAPIIGSFAPDAEDI 60
Query: 89 EVVKEYEN--WRQIRDFDGTIGWINKSLLSGKR 119
EV++ + W + +G+ GW++ L+
Sbjct: 61 EVIRPDDRYVWGLVNTSEGS-GWVSLRYLARTP 92
>gi|33341720|gb|AAQ15231.1|AF370395_1 PP10566 [Homo sapiens]
Length = 723
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 505 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 533
>gi|22760965|dbj|BAC11399.1| unnamed protein product [Homo sapiens]
Length = 723
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 505 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 533
>gi|327333096|gb|EGE74823.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL097PA1]
Length = 388
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKR 119
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYIRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 120 SAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
+ + NL + + + V G L T + W +
Sbjct: 179 AKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|326790607|ref|YP_004308428.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541371|gb|ADZ83230.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 302
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+KA+ N R P + V L G VEV+ + ++ +I +G+ G+++ + K
Sbjct: 94 TVKATSLNIRSYPDTQKSKVIGSLKGGTNVEVLYKVNDFYKIM-VNGSAGFVSSQYIDCK 152
Query: 119 RSAIVSPWNRKTNNPIYI 136
A +S I +
Sbjct: 153 YGAYISTQPLSNVGEIPV 170
>gi|167516036|ref|XP_001742359.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778983|gb|EDQ92597.1| predicted protein [Monosiga brevicollis MX1]
Length = 288
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Query: 89 EVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
EVV++ +N W + + + GW+ + L + I Y S
Sbjct: 187 EVVEKNDNGWWFVSNDSASQGWVPATFLEPLDGELPLLSIFMHEKYITTAAYA---ASSD 243
Query: 148 IVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
E GV++ + E W GW +
Sbjct: 244 DEIGYEKGVVVRVLEKKLDGWWQVEYQGKVGWTPGTFL 281
>gi|119592736|gb|EAW72330.1| EPS8-like 1, isoform CRA_c [Homo sapiens]
Length = 801
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 583 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 611
>gi|114568981|ref|YP_755661.1| NLP/P60 protein [Maricaulis maris MCS10]
gi|114339443|gb|ABI64723.1| NLP/P60 protein [Maricaulis maris MCS10]
Length = 283
Score = 34.6 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWI 179
V+P + + P + + K PD + + ++ G + + E W GW+
Sbjct: 29 FVTPVDHQVIIP-ALPIRKAPDAGAAMDDQLLAGEIFAVLETRDGWAWGQSRADGYVGWV 87
Query: 180 K 180
+
Sbjct: 88 E 88
>gi|302385115|ref|YP_003820937.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
gi|302195743|gb|ADL03314.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
Length = 230
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEW 167
W++ + A+ + + +++ + + ++++ G + E W
Sbjct: 20 WVSPNEAKAAEIAVETSTTLYAKLDMPVSVRDAANSEGTVLSQAGEGQTYEVVESPKDGW 79
Query: 168 CFGYNLDTEGWIKKQK 183
D +G+I+
Sbjct: 80 IKIKTQDGQGYIQSGS 95
>gi|297705933|ref|XP_002829808.1| PREDICTED: epidermal growth factor receptor kinase substrate 8-like
protein 1-like isoform 1 [Pongo abelii]
Length = 654
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 441 LEVLDDRRKWWKVRDPAGQEGYVPYNILT 469
>gi|228904760|ref|ZP_04068814.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228854774|gb|EEM99378.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 305
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 32/140 (22%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----- 112
V I + N R VV + KG + + G W++
Sbjct: 170 VEILVAELNVRESASFDSRVV-KTVKKGETYQTWGLSNGLYNV----GGNQWVSAGPAYV 224
Query: 113 -------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
L+GKR+ I K +N+ KP I+ + G
Sbjct: 225 KFTPAGSSSNGTPEDLAGKRNPI-----GKITTTANLNVRTKPSTDGDIIRTISSGDTWN 279
Query: 160 IRECSGEWCFGYNLDTEGWI 179
I + SG W + +GW+
Sbjct: 280 IYDISGGWARVH----DGWV 295
>gi|307155253|ref|YP_003890637.1| cell wall hydrolase/autolysin [Cyanothece sp. PCC 7822]
gi|306985481|gb|ADN17362.1| cell wall hydrolase/autolysin [Cyanothece sp. PCC 7822]
Length = 585
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + A+ +R GPG Y+ + T L KG V + +W ++ D+ WI K+
Sbjct: 233 IEVTANSGVTRTGPGTNYSRL-TPLPKGTRATVTGKQGDWLRL-DY---GAWILKA 283
>gi|146277250|ref|YP_001167409.1| hypothetical protein Rsph17025_1203 [Rhodobacter sphaeroides ATCC
17025]
gi|145555491|gb|ABP70104.1| hypothetical protein Rsph17025_1203 [Rhodobacter sphaeroides ATCC
17025]
Length = 107
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNL-------DTEGW 178
N ++++ + P ++ +A+V G L + R+C G+WC D GW
Sbjct: 39 DPNGDGFLSVRRGPGSENAEIARVRNGDALFLDHRKCQGKWCLAEGGVVGGRQTDIRGW 97
>gi|229030531|ref|ZP_04186567.1| Polysugar degrading enzyme [Bacillus cereus AH1271]
gi|228730798|gb|EEL81742.1| Polysugar degrading enzyme [Bacillus cereus AH1271]
Length = 333
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W+++
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTVSYRVLLPNGQKAWLRRN 195
>gi|207270800|ref|YP_002261442.1| gp26 [Listeria phage P40]
gi|204308015|gb|ACI00386.1| gp26 [Listeria phage P40]
Length = 344
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R V+ L V+V+ E W +++ +++ LS +
Sbjct: 231 VNTAHLNIREKASADSKVLGV-LDLNDSVQVISESGGWSKLK-SGNKQVYVSSKYLSKSK 288
Query: 120 S 120
+
Sbjct: 289 T 289
>gi|328883249|emb|CCA56488.1| hypothetical protein SVEN_3202 [Streptomyces venezuelae ATCC
10712]
Length = 107
Score = 34.6 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 10/47 (21%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-----KEYENW 97
R+ R N R GP Y VV + LP+ ++Y W
Sbjct: 28 RYAVAPGYRVNVRSGPSTQYPVV-----RSLPLGATVAISCQKYGEW 69
>gi|317011760|gb|ADU85507.1| hypothetical protein HPSA_07820 [Helicobacter pylori SouthAfrica7]
Length = 391
Score = 34.6 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
RI P T++ + +PV+++ ++++ +I IGW+ K
Sbjct: 343 IRILPTQNSTILGLSKNE-MPVKILGSHDDYYKILTPHEQIGWVKK 387
>gi|310643557|ref|YP_003948315.1| spoiid/lytb domain protein [Paenibacillus polymyxa SC2]
gi|309248507|gb|ADO58074.1| SpoIID/LytB domain protein [Paenibacillus polymyxa SC2]
Length = 697
Score = 34.6 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII--VAKVE 153
W + +G G+I + + ++ T N+ P IQS + VAK +
Sbjct: 445 EWYHVLLSNGKTGYIREDNAKELEGVTEAGLDKITVTAENTNVRPIPQIQSTVTPVAKAQ 504
Query: 154 PG---VLLTIRECSGE--WCF 169
PG ++L SG+ W
Sbjct: 505 PGEEMIVLEKVPQSGDYAWVR 525
>gi|194383922|dbj|BAG59319.1| unnamed protein product [Homo sapiens]
Length = 659
Score = 34.6 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 441 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 469
>gi|315094697|gb|EFT66673.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL060PA1]
Length = 343
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQI 100
S E+ RF + N R G Y L G + ++ E W +
Sbjct: 57 ASAEQAKRATTYTARFA-LSRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ G W+ ++ + R +N + +
Sbjct: 115 -NYRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRD 154
>gi|297277910|ref|XP_002801450.1| PREDICTED: EPS8-like 1 isoform 2 [Macaca mulatta]
Length = 591
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 378 LEVLDDRRKWWKVRDPAGQEGYVPYNILT 406
>gi|77917735|ref|YP_355550.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
gi|77543818|gb|ABA87380.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
Length = 375
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
N R P VV L E + W +R DG G+++K+
Sbjct: 41 NVRERPTTESAVVGKLLR-NQTAEYLDSVPYWYHVRLEDGGTGYVSKA 87
>gi|303247114|ref|ZP_07333389.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302491540|gb|EFL51425.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 123
Score = 34.2 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LD 174
+ N Y++L P + I+A ++ G + + G W +
Sbjct: 53 ATPVVVAPSVVYAQVNTQYLSLRSCPTTKCGIMASLDLGEQVQVLYHQGGWTHVFVPGRG 112
Query: 175 TEGWIKKQKI 184
EGW+ + +
Sbjct: 113 LEGWVATKYL 122
>gi|156743568|ref|YP_001433697.1| SH3 type 3 domain-containing protein [Roseiflexus castenholzii DSM
13941]
gi|156234896|gb|ABU59679.1| SH3 type 3 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 255
Score = 34.2 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 62 ASRANSRIGPGIMY-TVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGK 118
A+ N R P + + + +G V+++ +N W + G GW++ +LL+
Sbjct: 175 ANPGNVRADPNVSATPID--RVNQGEEVQLLGRSDNGRWYLVLTVRGVAGWVSATLLNVP 232
Query: 119 R-SAIVSPWNRKTNNPI 134
+A++ P N P
Sbjct: 233 PETAVLVPVNPDIALPT 249
>gi|322421403|ref|YP_004200626.1| hypothetical protein GM18_3928 [Geobacter sp. M18]
gi|320127790|gb|ADW15350.1| protein of unknown function DUF1058 [Geobacter sp. M18]
Length = 169
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
G + +++ W ++R DG GW+ +S
Sbjct: 52 GAELTLIEGAGRWLKVRTADGKEGWVYAGRVSDT 85
>gi|229197025|ref|ZP_04323763.1| Polysugar degrading enzyme [Bacillus cereus m1293]
gi|228586445|gb|EEK44525.1| Polysugar degrading enzyme [Bacillus cereus m1293]
Length = 333
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKH 195
>gi|156743539|ref|YP_001433668.1| hypothetical protein Rcas_3601 [Roseiflexus castenholzii DSM 13941]
gi|156234867|gb|ABU59650.1| hypothetical protein Rcas_3601 [Roseiflexus castenholzii DSM 13941]
Length = 447
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR--DFDGTI----GWINK---SLL 115
P T G PVEV+ + +W ++R GWI SLL
Sbjct: 374 VYLYSTPDEASTRTGIVAPLGAPVEVLAQRGDWYRVRVALPQNPQVELIGWIPARWVSLL 433
Query: 116 SGKRSAIVSP 125
+++P
Sbjct: 434 KPVPPEVITP 443
>gi|167525637|ref|XP_001747153.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774448|gb|EDQ88077.1| predicted protein [Monosiga brevicollis MX1]
Length = 1328
Score = 34.2 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGW 109
P+EV EY W RD G +GW
Sbjct: 758 YPLEVPMEYGVWYWARDGAGNVGW 781
>gi|327458105|gb|EGF04760.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
Length = 289
Score = 34.2 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSL 114
RF + N R G Y L G + ++ E W + ++ G W+
Sbjct: 71 RFA-LTRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV-NYRGKTAWVATRY 127
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ + R +N + +
Sbjct: 128 ITKMNRPVGIYAQRGDHNARSKAVQRD 154
>gi|221233298|ref|YP_002515734.1| SH3 domain-containing cell surface protein [Caulobacter crescentus
NA1000]
gi|220962470|gb|ACL93826.1| SH3 domain-containing cell surface protein [Caulobacter crescentus
NA1000]
Length = 295
Score = 34.2 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDT-EGWIKKQKI 184
+NL P ++ +V K+ G +G W G+ +
Sbjct: 195 TAASTVNLRAGPSTKTAVVGKLAAGETFDAIGQAPTGGWVLVGRSGFGVGYAAASLV 251
>gi|301300987|ref|ZP_07207150.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851403|gb|EFK79124.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 282
Score = 34.2 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKS 113
G V V+ +W++++ +G +GWI
Sbjct: 64 GDRVTVLSTKYHWKKVKTSEGEVGWIQDW 92
>gi|147677427|ref|YP_001211642.1| hypothetical protein PTH_1092 [Pelotomaculum thermopropionicum SI]
gi|146273524|dbj|BAF59273.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 262
Score = 34.2 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLL 115
N R + VV L G V++V + + W QI +G GW+ + +
Sbjct: 207 NVRSRGSLDGAVVSR-LNAGDLVKIVGKSGDGEWVQIELNNGQTGWVMRKYI 257
>gi|319937951|ref|ZP_08012351.1| hypothetical protein HMPREF9488_03187 [Coprobacillus sp. 29_1]
gi|319806857|gb|EFW03496.1| hypothetical protein HMPREF9488_03187 [Coprobacillus sp. 29_1]
Length = 285
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIR----DFDGTIGWI 110
+C Y+ GLP EV++ + W +IR + GWI
Sbjct: 231 SSNNADICGYIKYGLPFEVIEYHSGWLKIRYKNTLDEMKEGWI 273
>gi|260576831|ref|ZP_05844815.1| hypothetical protein Rsw2DRAFT_2802 [Rhodobacter sp. SW2]
gi|259020974|gb|EEW24286.1| hypothetical protein Rsw2DRAFT_2802 [Rhodobacter sp. SW2]
Length = 327
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 6/58 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WC--FGYNLDTEGWI 179
+N++ P + ++ G L R C WC +GW+
Sbjct: 153 TGLQEGSMLNIHSGPHTRYPVLIGAANGQLAQNRGCRMTGPHRWCSVRFDGSGQQGWV 210
>gi|229012104|ref|ZP_04169283.1| Polysugar degrading enzyme [Bacillus mycoides DSM 2048]
gi|228749192|gb|EEL99038.1| Polysugar degrading enzyme [Bacillus mycoides DSM 2048]
Length = 333
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V V+ + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVIDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEAFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+Y P + + +V L + + W++K
Sbjct: 149 AIVYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKN 195
>gi|146277338|ref|YP_001167497.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides ATCC
17025]
gi|146278146|ref|YP_001168305.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides ATCC
17025]
gi|145555579|gb|ABP70192.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Rhodobacter
sphaeroides ATCC 17025]
gi|145556387|gb|ABP71000.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Rhodobacter
sphaeroides ATCC 17025]
Length = 290
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 55 PRFVTIK--ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE----YENWRQIRDFDGTIG 108
PR V + N R P V + G PV V++ W Q+ + G G
Sbjct: 220 PRMVVVDTSGDSLNLRRWPSFN-PNVLARIPDGTPVPVLRRGTFDGREWLQV-AYGGHEG 277
Query: 109 WINKSLLS 116
WI + +
Sbjct: 278 WIVAAYTA 285
>gi|229156431|ref|ZP_04284523.1| Polysugar degrading enzyme [Bacillus cereus ATCC 4342]
gi|228627037|gb|EEK83772.1| Polysugar degrading enzyme [Bacillus cereus ATCC 4342]
Length = 333
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKH 195
>gi|84394158|ref|ZP_00992890.1| SH3 domain protein [Vibrio splendidus 12B01]
gi|84375217|gb|EAP92132.1| SH3 domain protein [Vibrio splendidus 12B01]
Length = 203
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 67 SRIGPGIMYTVVC-TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
GP + ++ + + + + Q++D G GW+ +S + S +
Sbjct: 33 MHSGPNNTFRIIGSVDAGEKITYLQTNKSTGYTQVQDNRGRKGWVESKFVSTQESMALRM 92
Query: 126 ----WNRKTNNPIYINLYKKPDIQSIIVA 150
N + D + +A
Sbjct: 93 PKLEKELTDVKGKLANARQSADSEKAGLA 121
>gi|58265752|ref|XP_570032.1| protein kinase regulator [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109061|ref|XP_776645.1| hypothetical protein CNBC1380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259325|gb|EAL21998.1| hypothetical protein CNBC1380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226264|gb|AAW42725.1| protein kinase regulator, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|315613882|gb|ADU52543.1| Ste50 [Cryptococcus neoformans var. neoformans]
Length = 700
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 82 LTKGLPVEVVKEYENWRQI-RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
L +G V V K+Y +W + R+ G GW+ + GK S + R+ +
Sbjct: 612 LKEGEKVRVYKKYCHWSYVIRNETGERGWVPAWFV-GKTSITIPVGMREAETAV 664
>gi|47567667|ref|ZP_00238377.1| cell wall-associated hydrolase [Bacillus cereus G9241]
gi|47555644|gb|EAL13985.1| cell wall-associated hydrolase [Bacillus cereus G9241]
Length = 333
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 85 GLPVEVVKEYENWRQI--------RDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIY 135
G V VV + +W ++ R+ +G GW+ + L+ + A +
Sbjct: 89 GQEVTVVDKKGDWVKVLVHGQPTLRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPT 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
LY P + + +V L + + W++K
Sbjct: 149 AILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKH 195
>gi|297705935|ref|XP_002829809.1| PREDICTED: epidermal growth factor receptor kinase substrate 8-like
protein 1-like isoform 2 [Pongo abelii]
Length = 591
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 378 LEVLDDRRKWWKVRDPAGQEGYVPYNILT 406
>gi|325685524|gb|EGD27616.1| dipeptidyl-peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 280
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 84 KGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG + V E + + +++ DG GW++K+ L+ + + + +P Y L KP
Sbjct: 96 KGSLLNVTDELVDGYYKVKLLDGRSGWVSKTALAKR---LDEDDFLWSADPEYFLLQAKP 152
Query: 143 DIQS 146
D +S
Sbjct: 153 DEES 156
>gi|313124422|ref|YP_004034681.1| dipeptidyl-peptidase vi, cysteine peptidase, merops family c40
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280985|gb|ADQ61704.1| Dipeptidyl-peptidase VI, Cysteine peptidase, MEROPS family C40
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 280
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 84 KGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG + V E + + +++ DG GW++K+ L+ + + + +P Y L KP
Sbjct: 96 KGSLLNVTDELVDGYYKVKLLDGRSGWVSKTALAKR---LDEDDFLWSADPEYFLLQAKP 152
Query: 143 DIQS 146
D +S
Sbjct: 153 DEES 156
>gi|161618706|ref|YP_001592593.1| SH3 type 3 domain-containing protein [Brucella canis ATCC 23365]
gi|254693485|ref|ZP_05155313.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|254704063|ref|ZP_05165891.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|260566689|ref|ZP_05837159.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261213743|ref|ZP_05928024.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261754721|ref|ZP_05998430.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|161335517|gb|ABX61822.1| SH3 type 3 domain protein [Brucella canis ATCC 23365]
gi|260156207|gb|EEW91287.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260915350|gb|EEX82211.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261744474|gb|EEY32400.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 170
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 38/118 (32%), Gaps = 15/118 (12%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYE--NWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R GPG Y V + G PV V W Q+ ++ GW + L+ + +
Sbjct: 32 NVRTGPGTGYAAVGA-IPSGAPVNVRGCTSGYGWCQV-NYGNMFGWASSRYLAMREGSAS 89
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYNLDTEGW 178
I + ++A V G L R G W + GW
Sbjct: 90 GYSGDFGQTAALIGI--------PLIAGVAIGAALNDRHDRWDRGYWHRHRHWRRSGW 139
>gi|31789434|gb|AAP58548.1| hypothetical protein [uncultured Acidobacteria bacterium]
Length = 373
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 29/114 (25%)
Query: 82 LTKGLPVEVVK-----------EYENWRQIR--DFDGTIGWINKS------LLSGKRSAI 122
+ +G +E++ + E W ++R D D T GWI +L R
Sbjct: 52 VNRGATIEILDFQDVQDPSDNTKKERWLRVRAQDEDNTEGWIESRNVMLDEVLQSSRKLA 111
Query: 123 VSPWNRKTNNPIYI----NLYKKPD--IQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + NL +PD I+ +++ G I W
Sbjct: 112 EEDANVPAQAAGQLHASSNLRLQPDRSDNENIMMRLDSGSSFDIV----GWKRV 161
>gi|281344130|gb|EFB19714.1| hypothetical protein PANDA_016072 [Ailuropoda melanoleuca]
Length = 675
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 464 LEVLDDRRKWWKVRDQQGQEGYVPYNILT 492
>gi|50843612|ref|YP_056839.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
KPA171202]
gi|289426002|ref|ZP_06427749.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
gi|289427943|ref|ZP_06429647.1| lipoprotein A-like protein [Propionibacterium acnes J165]
gi|295131694|ref|YP_003582357.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|50841214|gb|AAT83881.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
KPA171202]
gi|289153545|gb|EFD02259.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
gi|289158826|gb|EFD07026.1| lipoprotein A-like protein [Propionibacterium acnes J165]
gi|291377050|gb|ADE00905.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|313765634|gb|EFS36998.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL013PA1]
gi|313808349|gb|EFS46816.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA2]
gi|313810700|gb|EFS48414.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL083PA1]
gi|313816578|gb|EFS54292.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL059PA1]
gi|313821110|gb|EFS58824.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA1]
gi|313824034|gb|EFS61748.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA2]
gi|313827221|gb|EFS64935.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL063PA1]
gi|313829657|gb|EFS67371.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL063PA2]
gi|313831478|gb|EFS69192.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL007PA1]
gi|313833473|gb|EFS71187.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL056PA1]
gi|314916618|gb|EFS80449.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA4]
gi|314918921|gb|EFS82752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA1]
gi|314920932|gb|EFS84763.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA3]
gi|314926923|gb|EFS90754.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA3]
gi|314931427|gb|EFS95258.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL067PA1]
gi|314956652|gb|EFT00904.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA1]
gi|314959530|gb|EFT03632.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL002PA1]
gi|314968868|gb|EFT12966.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA1]
gi|314974828|gb|EFT18923.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL053PA1]
gi|314977845|gb|EFT21939.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL045PA1]
gi|314979555|gb|EFT23649.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL072PA2]
gi|314984745|gb|EFT28837.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA1]
gi|314988398|gb|EFT32489.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA2]
gi|314990295|gb|EFT34386.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA3]
gi|315083839|gb|EFT55815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA2]
gi|315087248|gb|EFT59224.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL002PA3]
gi|315089665|gb|EFT61641.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL072PA1]
gi|315095615|gb|EFT67591.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL038PA1]
gi|315100299|gb|EFT72275.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL059PA2]
gi|315102419|gb|EFT74395.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL046PA1]
gi|315107740|gb|EFT79716.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL030PA1]
gi|327326672|gb|EGE68460.1| lipoprotein A family protein [Propionibacterium acnes HL096PA3]
gi|327332934|gb|EGE74666.1| lipoprotein A family protein [Propionibacterium acnes HL096PA2]
gi|327448639|gb|EGE95293.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL043PA1]
gi|327449510|gb|EGE96164.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL013PA2]
gi|327451136|gb|EGE97790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL043PA2]
gi|327455754|gb|EGF02409.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA3]
gi|328757070|gb|EGF70686.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL025PA2]
gi|328757265|gb|EGF70881.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA1]
gi|328757453|gb|EGF71069.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL020PA1]
gi|328761985|gb|EGF75492.1| lipoprotein A family protein [Propionibacterium acnes HL099PA1]
gi|332676558|gb|AEE73374.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
266]
Length = 343
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSL 114
RF + N R G Y L G + ++ E W + ++ G W+
Sbjct: 71 RFA-LTRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV-NYRGKTAWVATRY 127
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ + R +N + +
Sbjct: 128 ITKMNRPVGIYAQRGDHNARSKAVQRD 154
>gi|228933190|ref|ZP_04096046.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826351|gb|EEM72128.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 350
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 40 LALSHEKEIFEKKPLPRFVT-----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ +S + + + +P VT I+ N R GPG Y+ + L K V E
Sbjct: 190 VDVSVPNKPSKPEEVPTAVTDGIAYIEGYNVNLRKGPGTSYSKI-RQLNKPESYVVWAEK 248
Query: 95 ENWRQIRDFDGTIGWI 110
+ W + G WI
Sbjct: 249 DGWLNL----GGEQWI 260
>gi|332857263|ref|XP_512904.3| PREDICTED: EPS8-like 1 [Pan troglodytes]
Length = 583
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 378 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 406
>gi|313793623|gb|EFS41654.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA1]
gi|313802934|gb|EFS44145.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA2]
gi|313839433|gb|EFS77147.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL086PA1]
gi|314964726|gb|EFT08826.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL082PA1]
gi|315082422|gb|EFT54398.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL078PA1]
gi|327455956|gb|EGF02611.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL092PA1]
Length = 343
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSL 114
RF + N R G Y L G + ++ E W + ++ G W+
Sbjct: 71 RFA-LTRVHLNVRSGHSTEYR-RYGLLRPGDKLLIIGEDVRGWTPV-NYRGKTAWVATRY 127
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKK 141
++ + R +N + +
Sbjct: 128 ITKMNRPVGIYAQRGDHNARSKAVQRD 154
>gi|301782015|ref|XP_002926419.1| PREDICTED: epidermal growth factor receptor kinase substrate 8-like
protein 1-like [Ailuropoda melanoleuca]
Length = 710
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 500 LEVLDDRRKWWKVRDQQGQEGYVPYNILT 528
>gi|73947524|ref|XP_541418.2| PREDICTED: similar to epidermal growth factor receptor pathway
substrate 8-like protein 1 isoform a [Canis familiaris]
Length = 686
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 480 LEVLDDRRKWWKVRDQQGQEGYVPYNILT 508
>gi|300811794|ref|ZP_07092265.1| NlpC/P60 family protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497210|gb|EFK32261.1| NlpC/P60 family protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 280
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 84 KGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG + V E + + +++ DG GW++K+ L+ + + + +P Y L KP
Sbjct: 96 KGSLLNVTDELVDGYYKVKLLDGRSGWVSKTALAKR---LDEDDVLWSADPEYFLLQAKP 152
Query: 143 DIQS 146
D +S
Sbjct: 153 DEES 156
>gi|315104090|gb|EFT76066.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA2]
Length = 388
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 10/132 (7%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLS--- 116
+ R G + V L+ G V V + + ++ ++G W+ LS
Sbjct: 121 ATTYVYVRAGHSMQAAKVGV-LSPGEKVGVTGRSAQGFSEVV-YNGVHRWVGSRYLSPTA 178
Query: 117 GKRSAIVSPWNRKTNNP---IYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYN 172
K S +P + + +NL + + V G L + W +
Sbjct: 179 AKPSPKPTPAPKPSKTVYTTANLNLRNGASMSAAAYTSVSRGTALAATGRTTSGWTQITH 238
Query: 173 LDTEGWIKKQKI 184
W + +
Sbjct: 239 RGRTLWASSKYL 250
>gi|148539855|ref|NP_060199.3| epidermal growth factor receptor kinase substrate 8-like protein 1
isoform b [Homo sapiens]
gi|16041765|gb|AAH15763.1| EPS8-like 1 [Homo sapiens]
gi|119592735|gb|EAW72329.1| EPS8-like 1, isoform CRA_b [Homo sapiens]
Length = 596
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 378 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 406
>gi|313616982|gb|EFR89598.1| GW repeat-containing surface protein [Listeria innocua FSL S4-378]
Length = 508
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 81 YLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYI 136
Y + L + E E W IR+ + IGW+N S LS ++ + K + +
Sbjct: 229 YTNRNLEISWEAKTEKGLWYFIRENNKDIGWVNSSALTLSYHQNNDENVDTTKYVDDLNA 288
Query: 137 NLYKKPDI----QSIIVAKVEPGVLLTIRECSGE---WCFGY-NLDTEGWIKKQKI 184
++Y+ P+ + +AK + L ++ + + W + GW++ K+
Sbjct: 289 HIYRLPNPEQQFDNGTIAKYDRKALHADKKITRDGYAWFRLSESSKVIGWVRSDKL 344
>gi|254700861|ref|ZP_05162689.1| SH3 type 3 domain protein [Brucella suis bv. 5 str. 513]
Length = 281
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|229092676|ref|ZP_04223824.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
gi|228690703|gb|EEL44480.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
Length = 342
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Query: 40 LALSHEKEIFEKKPLPRFVT-----IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ +S ++ F+ +P VT I+ N R GPG Y+ + L K V E
Sbjct: 182 VDVSVPEQPFKPSEVPTAVTDGIAYIEGYNVNLRKGPGTSYSKI-RQLNKPESYIVWAEK 240
Query: 95 ENWRQIRDFDGTIGWI 110
+ W + G WI
Sbjct: 241 DGWLNL----GGDQWI 252
>gi|226310655|ref|YP_002770549.1| hypothetical protein BBR47_10680 [Brevibacillus brevis NBRC 100599]
gi|226093603|dbj|BAH42045.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 577
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + ++ IVA++ G ++ + W G+I ++ I
Sbjct: 174 QAKVIAAEEKQAVRTGASHRTPIVAELSAGEVVDVLGKKENWYHVLTASGVGGFISEKSI 233
>gi|225570096|ref|ZP_03779121.1| hypothetical protein CLOHYLEM_06192 [Clostridium hylemonae DSM
15053]
gi|225161566|gb|EEG74185.1| hypothetical protein CLOHYLEM_06192 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +P +S V K+ P + GEW + G++ + I
Sbjct: 83 IRSEPTKESEWVGKLYPDYAAKVIGPVGEWTKIQSGSVTGYVYSEYI 129
>gi|118587927|ref|ZP_01545337.1| hypothetical protein SIAM614_10138 [Stappia aggregata IAM 12614]
gi|118439549|gb|EAV46180.1| hypothetical protein SIAM614_10138 [Stappia aggregata IAM 12614]
Length = 904
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+N + P + V G + + C G WC G++ Q +
Sbjct: 30 TTANVNFRQGPGTNFGSLGTVPSGTQVEMENCDDSGAWCSISYNGQNGFVSGQYL 84
>gi|7020230|dbj|BAA91041.1| unnamed protein product [Homo sapiens]
Length = 596
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+EV+ + W ++RD G G++ ++L+
Sbjct: 378 LEVLDDSRKWWKVRDPAGQEGYVPYNILT 406
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.138 0.447
Lambda K H
0.267 0.0423 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,638,712,712
Number of Sequences: 14124377
Number of extensions: 144524350
Number of successful extensions: 371779
Number of sequences better than 10.0: 3498
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 2528
Number of HSP's that attempted gapping in prelim test: 362244
Number of HSP's gapped (non-prelim): 7562
length of query: 194
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 63
effective length of database: 2,992,500,243
effective search space: 188527515309
effective search space used: 188527515309
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 77 (34.2 bits)