HHsearch alignment for GI: 254780765 and conserved domain: COG1207
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].
Probab=99.88 E-value=2.2e-21 Score=153.73 Aligned_cols=226 Identities=21% Similarity=0.298 Sum_probs=155.0
Q ss_pred CEEEEEEC-----CCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCC--CHHHHCCCC-CCCCCCCCCCCC
Q ss_conf 56999817-----7678889885000006722668999999967998699986833--000100012-222222222345
Q gi|254780765|r 9 KVLVIIPA-----RLNSMRFPKKILADINGLPMILHTAIRARKANIGRVIVAVDDT--KINEIVLQA-GFESVMTHTSHQ 80 (268)
Q Consensus 9 ki~~iIpA-----R~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd~--~I~~~~~~~-g~~~i~t~~~~~ 80 (268)
T Consensus 2 ~~~~vILAAGkGTRMkS~-lP-KVLH~vaGkpMl~hVi~~a~~l~~~~i~vVvGh~ae~V~~~~~~~~~v~~v~Q~--eq 77 (460)
T COG1207 2 SLSAVILAAGKGTRMKSD-LP-KVLHPVAGKPMLEHVIDAARALGPDDIVVVVGHGAEQVREALAERDDVEFVLQE--EQ 77 (460)
T ss_pred CCEEEEEECCCCCCCCCC-CC-CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEC--CC
T ss_conf 616999944887534579-84-111001680089999998762686618999868778999875635473399962--55
Q ss_pred CCCH-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC----C-CCCCEEEE
Q ss_conf 6520-4899997422334521000015221010000012233321013443211111122011003----7-54431465
Q gi|254780765|r 81 SGSD-RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPD----D-PNIVKIVV 154 (268)
Q Consensus 81 ~GTd-Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~----d-~n~vKvi~ 154 (268)
T Consensus 78 lGTgHAV~~a~~~l~~~~~g~-vLVl~GD~PLit~~TL~~L~~~~~~~~~~~tvLt~~~~dP~GYGRIvr~~~g~V~~IV 156 (460)
T COG1207 78 LGTGHAVLQALPALADDYDGD-VLVLYGDVPLITAETLEELLAAHPAHGAAATVLTAELDDPTGYGRIVRDGNGEVTAIV 156 (460)
T ss_pred CCHHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEE
T ss_conf 873899996667640478973-8999699666789999999986340377559999873899875469993998699999
Q ss_pred ECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCC-H-HHHHHH-HCCCEEEEEEECC-
Q ss_conf 14544420011110357775311122352013552002333332079982111208-4-479899-7896266998458-
Q gi|254780765|r 155 ASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRES-L-EQLRAL-EARMRIDVKIVQS- 230 (268)
Q Consensus 155 ~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~-l-EqLR~l-eng~~I~~~~~~~- 230 (268)
T Consensus 157 E~KDA~~e------ek~I~ei-------NtGiy~f~~~~L~~~L~~l~nnNaqgEYYLTDvI~i~~~~g~~V~a~~~~d~ 223 (460)
T COG1207 157 EEKDASEE------EKQIKEI-------NTGIYAFDGAALLRALPKLSNNNAQGEYYLTDVIAIARNEGEKVRAVHVDDE 223 (460)
T ss_pred ECCCCCHH------HHCCCEE-------EEEEEEECHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCH
T ss_conf 74789978------9508388-------2068998679999999872566655748689999999857976999966966
Q ss_pred -CCCCCCCHHHHHHHHHHHHCCH
Q ss_conf -8887689999999999973072
Q gi|254780765|r 231 -NAMSVDTTNDLEKVRTLIPHDH 252 (268)
Q Consensus 231 -~~~~IDt~~Dl~~v~~il~~~~ 252 (268)
T Consensus 224 ~E~~GVN~R~qLa~~e~~~q~r~ 246 (460)
T COG1207 224 EEVLGVNDRVQLAEAERIMQRRI 246 (460)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 88627674999999999999999