HHsearch alignment for GI: 254780765 and conserved domain: COG1207

>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].
Probab=99.88  E-value=2.2e-21  Score=153.73  Aligned_cols=226  Identities=21%  Similarity=0.298  Sum_probs=155.0

Q ss_pred             CEEEEEEC-----CCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCC--CHHHHCCCC-CCCCCCCCCCCC
Q ss_conf             56999817-----7678889885000006722668999999967998699986833--000100012-222222222345
Q gi|254780765|r    9 KVLVIIPA-----RLNSMRFPKKILADINGLPMILHTAIRARKANIGRVIVAVDDT--KINEIVLQA-GFESVMTHTSHQ   80 (268)
Q Consensus         9 ki~~iIpA-----R~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd~--~I~~~~~~~-g~~~i~t~~~~~   80 (268)
T Consensus         2 ~~~~vILAAGkGTRMkS~-lP-KVLH~vaGkpMl~hVi~~a~~l~~~~i~vVvGh~ae~V~~~~~~~~~v~~v~Q~--eq   77 (460)
T COG1207           2 SLSAVILAAGKGTRMKSD-LP-KVLHPVAGKPMLEHVIDAARALGPDDIVVVVGHGAEQVREALAERDDVEFVLQE--EQ   77 (460)
T ss_pred             CCEEEEEECCCCCCCCCC-CC-CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEC--CC
T ss_conf             616999944887534579-84-111001680089999998762686618999868778999875635473399962--55


Q ss_pred             CCCH-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC----C-CCCCEEEE
Q ss_conf             6520-4899997422334521000015221010000012233321013443211111122011003----7-54431465
Q gi|254780765|r   81 SGSD-RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPD----D-PNIVKIVV  154 (268)
Q Consensus        81 ~GTd-Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~----d-~n~vKvi~  154 (268)
T Consensus        78 lGTgHAV~~a~~~l~~~~~g~-vLVl~GD~PLit~~TL~~L~~~~~~~~~~~tvLt~~~~dP~GYGRIvr~~~g~V~~IV  156 (460)
T COG1207          78 LGTGHAVLQALPALADDYDGD-VLVLYGDVPLITAETLEELLAAHPAHGAAATVLTAELDDPTGYGRIVRDGNGEVTAIV  156 (460)
T ss_pred             CCHHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEE
T ss_conf             873899996667640478973-8999699666789999999986340377559999873899875469993998699999


Q ss_pred             ECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCC-H-HHHHHH-HCCCEEEEEEECC-
Q ss_conf             14544420011110357775311122352013552002333332079982111208-4-479899-7896266998458-
Q gi|254780765|r  155 ASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRES-L-EQLRAL-EARMRIDVKIVQS-  230 (268)
Q Consensus       155 ~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~-l-EqLR~l-eng~~I~~~~~~~-  230 (268)
T Consensus       157 E~KDA~~e------ek~I~ei-------NtGiy~f~~~~L~~~L~~l~nnNaqgEYYLTDvI~i~~~~g~~V~a~~~~d~  223 (460)
T COG1207         157 EEKDASEE------EKQIKEI-------NTGIYAFDGAALLRALPKLSNNNAQGEYYLTDVIAIARNEGEKVRAVHVDDE  223 (460)
T ss_pred             ECCCCCHH------HHCCCEE-------EEEEEEECHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             74789978------9508388-------2068998679999999872566655748689999999857976999966966


Q ss_pred             -CCCCCCCHHHHHHHHHHHHCCH
Q ss_conf             -8887689999999999973072
Q gi|254780765|r  231 -NAMSVDTTNDLEKVRTLIPHDH  252 (268)
Q Consensus       231 -~~~~IDt~~Dl~~v~~il~~~~  252 (268)
T Consensus       224 ~E~~GVN~R~qLa~~e~~~q~r~  246 (460)
T COG1207         224 EEVLGVNDRVQLAEAERIMQRRI  246 (460)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             88627674999999999999999