HHsearch alignment for GI: 254780765 and conserved domain: COG1209
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].
Probab=99.57 E-value=1.4e-13 Score=105.01 Aligned_cols=218 Identities=16% Similarity=0.214 Sum_probs=152.6
Q ss_pred EEEECCCCCCCC-C-----CCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCC---CHHHHC---CCCCCCCCCCCCCC
Q ss_conf 998177678889-8-----85000006722668999999967998699986833---000100---01222222222234
Q gi|254780765|r 12 VIIPARLNSMRF-P-----KKILADINGLPMILHTAIRARKANIGRVIVAVDDT---KINEIV---LQAGFESVMTHTSH 79 (268)
Q Consensus 12 ~iIpAR~~S~Rl-p-----~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd~---~I~~~~---~~~g~~~i~t~~~~ 79 (268)
T Consensus 3 giILAgG~GTRL~PlT~~~~KqLlpV~~KPmi~y~l~~L~~aGI~dI~II~~~~~~~~~~~llGdgs~~gv~itY~~Q~~ 82 (286)
T COG1209 3 GVILAGGSGTRLRPLTRVVPKQLLPVYDKPMIYYPLETLMLAGIRDILIVVGPEDKPTFKELLGDGSDFGVDITYAVQPE 82 (286)
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 27963767544332313677533211686215857999997598569999668850566633367100386369996589
Q ss_pred CCCCHHHHHHHHHHCCCCC-CCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEE-EECC
Q ss_conf 5652048999974223345-2100001522101000001223332101344321111112201100375443146-5145
Q gi|254780765|r 80 QSGSDRIFEALNIIDSDKK-SQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIV-VASP 157 (268)
Q Consensus 80 ~~GTdRi~ea~~~l~~~~~-~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi-~~~~ 157 (268)
T Consensus 83 p~G---lA~Av~~a~~fv~~~~f~l~L-GDNi~~~--~l~~~~~~~~~~~~ga~i~~~~V~dP~rfG------V~e~d~~ 150 (286)
T COG1209 83 PDG---LAHAVLIAEDFVGDDDFVLYL-GDNIFQD--GLSELLEHFAEEGSGATILLYEVDDPSRYG------VVEFDED 150 (286)
T ss_pred CCC---HHHHHHHHHHHCCCCCEEEEE-CCCEECC--CHHHHHHHHHCCCCCCEEEEEECCCCCCCE------EEEECCC
T ss_conf 876---899999888645898659992-6844105--779999998524899489999848953044------8998689
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCC---CCHHHCCHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 4442001111035777531112235201355200233333207998---2111208447989978962669984588887
Q gi|254780765|r 158 SENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPS---VLEQRESLEQLRALEARMRIDVKIVQSNAMS 234 (268)
Q Consensus 158 ~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t---~lE~~E~lEqLR~leng~~I~~~~~~~~~~~ 234 (268)
T Consensus 151 ~-----~v~--~l~EKP~~P~SNlAvtGlY~~d~~Vf~~~~~ikPS~RGElEITd~i~~--~i~~G~~~~~~~~~G~WlD 221 (286)
T COG1209 151 G-----KVI--GLEEKPKEPKSNLAVTGLYFYDPSVFEAIKQIKPSARGELEITDAIDL--YIEKGYLVVAILIRGWWLD 221 (286)
T ss_pred C-----CEE--EEEECCCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCCEEEHHHHHH--HHHCCCEEEEEECCCEEEE
T ss_conf 9-----687--767889999876268899970858999987189887785675288999--9976968889871516886
Q ss_pred CCCHHHHHHHHHHHHC
Q ss_conf 6899999999999730
Q gi|254780765|r 235 VDTTNDLEKVRTLIPH 250 (268)
Q Consensus 235 IDt~~Dl~~v~~il~~ 250 (268)
T Consensus 222 tGt~~slleA~~~i~~ 237 (286)
T COG1209 222 TGTPESLLEANNFVRT 237 (286)
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 3870128999999988