HHsearch alignment for GI: 254780765 and conserved domain: cd02508
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=99.15 E-value=7e-10 Score=81.94 Aligned_cols=173 Identities=16% Similarity=0.160 Sum_probs=107.3
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCC-CHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC---C-------CCC
Q ss_conf 998177678889-------88500000672-266899999996799869998683--300010001---2-------222
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGL-PMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ---A-------GFE 71 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gk-plI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~---~-------g~~ 71 (268)
T Consensus 1 AvIlagG~GtRL~pLT~~~P-Kp~lpi~gk~~iId~~l~~l~~~Gi~~i~i~~~y~~~~i~~hl~~g~~~~~~~~~~gi~ 79 (200)
T cd02508 1 AIILAGGEGTRLSPLTKKRA-KPAVPFGGRYRLIDFPLSNMVNSGIRNVGVLTQYKSRSLNDHLGSGKEWDLDRKNGGLF 79 (200)
T ss_pred CEEECCCCCCCCHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf 98957888863625447997-41308899162079999988767976799834535899999985640125765668589
Q ss_pred CCCC----CCCCCCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 2222----22345652-048999974223345210000152210100000122333210134432111111220110037
Q gi|254780765|r 72 SVMT----HTSHQSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDD 146 (268)
Q Consensus 72 ~i~t----~~~~~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d 146 (268)
T Consensus 80 i~~~~~~~~~~~~~Gt~~~i~~~~~~l~~~-~~~~~lv~ngD~--l~~~D~~~~l~~H~~~~a~~Ti~-~~--------- 146 (200)
T cd02508 80 ILPPQQRKGGDWYRGTADAIYQNLDYIERS-DPEYVLILSGDH--IYNMDYREMLDFHIESGADITVV-YK--------- 146 (200)
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCEEEEECCCE--EEECCHHHHHHHHHHCCCCEEEE-EE---------
T ss_conf 963133368765534789999999987217-887299976997--87069999999998769998999-98---------
Q ss_pred CCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHH-HHHCCCEEEE
Q ss_conf 544314651454442001111035777531112235201355200233333207998211120844798-9978962669
Q gi|254780765|r 147 PNIVKIVVASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLR-ALEARMRIDV 225 (268)
Q Consensus 147 ~n~vKvi~~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR-~leng~~I~~ 225 (268)
T Consensus 147 ------i-----------------------------n~GiYi~~~~~l~~~l~~~~~~~~~d~~~d~ip~l~~~-~~v~~ 190 (200)
T cd02508 147 ------A-----------------------------SMGIYIFSKDLLIELLEEDAADGSHDFGKDIIPAMLKK-LKIYA 190 (200)
T ss_pred ------E-----------------------------ECEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC-CCEEE
T ss_conf ------5-----------------------------04899980899999998632467675589999999603-98899
Q ss_pred EEECCCCCC
Q ss_conf 984588887
Q gi|254780765|r 226 KIVQSNAMS 234 (268)
Q Consensus 226 ~~~~~~~~~ 234 (268)
T Consensus 191 y~~~gyw~D 199 (200)
T cd02508 191 YEFNGYWAD 199 (200)
T ss_pred EECCCEEEC
T ss_conf 966885749