HHsearch alignment for GI: 254780765 and conserved domain: cd02540
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=99.90 E-value=1.7e-22 Score=160.75 Aligned_cols=213 Identities=21% Similarity=0.316 Sum_probs=146.0
Q ss_pred EEEECCCCCCCC----CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECC--CCCHHHHCCCCCCCCCCCCCCCCCCC-H
Q ss_conf 998177678889----8850000067226689999999679986999868--33000100012222222222345652-0
Q gi|254780765|r 12 VIIPARLNSMRF----PKKILADINGLPMILHTAIRARKANIGRVIVAVD--DTKINEIVLQAGFESVMTHTSHQSGS-D 84 (268)
Q Consensus 12 ~iIpAR~~S~Rl----p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTd--d~~I~~~~~~~g~~~i~t~~~~~~GT-d 84 (268)
T Consensus 1 AvIlAaG~GtRl~~~~P-Kpllpi~~kpii~~ii~~l~~~gi~~i~iv~~~~~e~i~~~~~~~~i~~v~--Q~~~lGta~ 77 (229)
T cd02540 1 AVILAAGKGTRMKSDLP-KVLHPLAGKPMLEHVLDAARALGPDRIVVVVGHGAEQVKKALANPNVEFVL--QEEQLGTGH 77 (229)
T ss_pred CEEECCCCCCCCCCCCC-CCCCEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEEE--ECCCCCCHH
T ss_conf 98946878757998978-415189987999999999997699759963576899999875438726998--068897378
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHH
Q ss_conf 48999974223345210000152210100000122333210134432111111220110037544314651454442001
Q gi|254780765|r 85 RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFR 164 (268)
Q Consensus 85 Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~~~ 164 (268)
T Consensus 78 Av~~a~~~i~~~~--~~~lVl~gD~pli~~~~l~~l~~~~~~~~~~~ti~~~~~~~p~~YG-----~v~~d~~g-----~ 145 (229)
T cd02540 78 AVKQALPALKDFE--GDVLVLYGDVPLITPETLQRLLEAHREAGADVTVLTAELEDPTGYG-----RIIRDGNG-----K 145 (229)
T ss_pred HHHHHHHHCCCCC--CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC-----EEEECCCC-----C
T ss_conf 9999987445888--7299995896453678899999999965996699998604876786-----79988999-----7
Q ss_pred HHHCC--CCCCCCCCCCCCCCEEEEEEEHHHHHHH-HCCCCCC----CHHHCCHHHHHHHHCCCEEEEEEECC--CCCCC
Q ss_conf 11103--5777531112235201355200233333-2079982----11120844798997896266998458--88876
Q gi|254780765|r 165 ALYFT--RTKTPHGTGPFYQHLGIYAYRREALKRF-TQLSPSV----LEQRESLEQLRALEARMRIDVKIVQS--NAMSV 235 (268)
Q Consensus 165 alyfs--R~~ip~~~~~~~~hvGIy~f~~~~L~~~-~~l~~t~----lE~~E~lEqLR~leng~~I~~~~~~~--~~~~I 235 (268)
T Consensus 146 v~~ivEkk~~~~~~~~~~~~n~GiYif~~~~l~~~l~~l~~~~~~gE~~ltD~i~--~~i~~g~kv~~~~~~~~~~~~Gi 223 (229)
T cd02540 146 VLRIVEEKDATEEEKAIREVNAGIYAFDAEFLFEALPKLTNNNAQGEYYLTDIIA--LAVADGLKVAAVLADDEEEVLGV 223 (229)
T ss_pred EEEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCCCCCCCEEEHHHHHH--HHHHCCCCEEEEEECCHHHEECC
T ss_conf 8999988787654345432222799985999999998479876688788999999--99988991899992887661378
Q ss_pred CCHHHH
Q ss_conf 899999
Q gi|254780765|r 236 DTTNDL 241 (268)
Q Consensus 236 Dt~~Dl 241 (268)
T Consensus 224 n~~~dl 229 (229)
T cd02540 224 NDRVQL 229 (229)
T ss_pred CCHHHC
T ss_conf 897879