HHsearch alignment for GI: 254780765 and conserved domain: cd06422
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=99.58 E-value=4.2e-14 Score=108.27 Aligned_cols=207 Identities=19% Similarity=0.215 Sum_probs=123.7
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC--CCCCCCCCCC-CC
Q ss_conf 998177678889-------88500000672266899999996799869998683--300010001--2222222222-34
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ--AGFESVMTHT-SH 79 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~--~g~~~i~t~~-~~ 79 (268)
T Consensus 2 AvIlAgG~GtRl~plT~~~P-Kpllpv~~kpii~~~i~~l~~~gi~~iii~~~y~~~~i~~~~~~~~~~~~i~~~~e~~~ 80 (221)
T cd06422 2 AMILAAGLGTRMRPLTDTRP-KPLVPVAGKPLIDHALDRLAAAGIRRIVVNTHHLADQIEAHLGDSRFGLRITISDEPDE 80 (221)
T ss_pred EEEECCCCCCCCCHHHCCCC-HHEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 89988847668874457998-02379999899999999999829967998325327889998722557873799740332
Q ss_pred CCCCH-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCC
Q ss_conf 56520-48999974223345210000152210100000122333210134432111111220110037544314651454
Q gi|254780765|r 80 QSGSD-RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPS 158 (268)
Q Consensus 80 ~~GTd-Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~ 158 (268)
T Consensus 81 ~lGT~~ai~~a~~~~~~----d~flv~~gD~-l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~~~~~~ 151 (221)
T cd06422 81 LLETGGGIKKALPLLGD----EPFLVVNGDI-LWD-GDLAPLLLLHAWRMDALLLLLPLVRNPGH-N--GVGDFSLDADG 151 (221)
T ss_pred CCCCCHHHHHHHHHCCC----CCEEEEECCE-EEC-CCHHHHHHHHHHHCCCCEEEEEEECCCCC-C--CCCEEEECCCE
T ss_conf 36650588888863499----8689980675-781-89899999999706897799998678765-5--75379876865
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCH
Q ss_conf 44200111103577753111223520135520023333320799821112084479899789626699845888876899
Q gi|254780765|r 159 ENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVDTT 238 (268)
Q Consensus 159 ~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~ 238 (268)
T Consensus 152 -----~i~---~~--~~~~~~~~~~~G~yif~~~if~~i---~~~~~~~~d~~~~--li~~~-~v~~~~~~g~w~DiGtp 215 (221)
T cd06422 152 -----RLR---RG--GGGAVAPFTFTGIQILSPELFAGI---PPGKFSLNPLWDR--AIAAG-RLFGLVYDGLWFDVGTP 215 (221)
T ss_pred -----EEE---EC--CCCCCCEEEEEEEEEEEHHHHHHC---CCCCCCHHHHHHH--HHHCC-CEEEEECCCEEEECCCH
T ss_conf -----899---77--888774278877999818999547---8887755899999--99669-84999729979949999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780765|r 239 NDLEKV 244 (268)
Q Consensus 239 ~Dl~~v 244 (268)
T Consensus 216 e~~~~A 221 (221)
T cd06422 216 ERLLAA 221 (221)
T ss_pred HHHHHC
T ss_conf 999749