>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

Probab=95.47 E-value=0.18 Score=29.46 Aligned_cols=193 Identities=19% Similarity=0.160 Sum_probs=99.4 Q ss_pred HHHHHHHHHHHCC-C-CEEEEECC----CC---CHHHHCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHCCCCCCCEEEE Q ss_conf 6689999999679-9-86999868----33---000100012222222222345652--048999974223345210000 Q gi|254780765|r 36 MILHTAIRARKAN-I-GRVIVAVD----DT---KINEIVLQAGFESVMTHTSHQSGS--DRIFEALNIIDSDKKSQIIVN 104 (268) Q Consensus 36 lI~~v~~~a~~s~-~-~~viVaTd----d~---~I~~~~~~~g~~~i~t~~~~~~GT--dRi~ea~~~l~~~~~~d~vV~ 104 (268) T Consensus 13 vi~~~l~sl~~~~Yp~~eIiVvdd~stD~t~~~~v~~~~~~~~~~~~~~~~~~~~g~K~~alN~~l~~~~--~~~e~i~~ 90 (236) T cd06435 13 MVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALERTA--PDAEIIAV 90 (236) T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCC--CCCEEEEE T ss_conf 9999999999579999879999892998158999999998729967999948889970999999999647--98549999 Q ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCC--CCCCCCC Q ss_conf 15221010000012233321013443211111122011003754431465145444200111103577753--1112235 Q gi|254780765|r 105 MQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFRALYFTRTKTPH--GTGPFYQ 182 (268) Q Consensus 105 lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~~~alyfsR~~ip~--~~~~~~~ 182 (268) T Consensus 91 ~DaD~-~~~pd~L~~~v~~f~~p~vg~v~~~~~~~~~~----~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~ 158 (236) T cd06435 91 IDADY-QVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGE----ESLFKRMCYA------EYKGFF-DIGMVSRNERNAIIQ 158 (236) T ss_pred ECCCC-CCCHHHHHHHHHHHCCCCEEEEECCEECCCCC----CCHHHHHHHH------HHHHHH-HHHHHHHHCCCCEEE T ss_conf 76887-77868999999860498768995561314877----6799999999------999999-988988853897476 Q ss_pred CEEEEEEEHHHHHHHHCCCCCCCHHHCCHH-HHHHHHCCCEEEEEEECC-CCCCCCCHHHHHHH Q ss_conf 201355200233333207998211120844-798997896266998458-88876899999999 Q gi|254780765|r 183 HLGIYAYRREALKRFTQLSPSVLEQRESLE-QLRALEARMRIDVKIVQS-NAMSVDTTNDLEKV 244 (268) Q Consensus 183 hvGIy~f~~~~L~~~~~l~~t~lE~~E~lE-qLR~leng~~I~~~~~~~-~~~~IDt~~Dl~~v 244 (268) T Consensus 159 ~G~~~~~Rr~~l~~iGgf~~~~~--~ED~dl~~rl~~~G~~~~y~p~a~~~~~~p~t~~~~~~Q 220 (236) T cd06435 159 HGTMCLIRRSALDDVGGWDEWCI--TEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQ 220 (236) T ss_pred CCEEEEEEHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCEEEECCCCEEEEECCCCHHHHHHH T ss_conf 66468878899998389887775--777999999998599799725777986577889999999

HHsearch alignment for GI: 254780765 and conserved domain: cd06435