HHsearch results for GI: 254780765 and protein with PDBid: 1i52_A

>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP), isoprenoid biosynthesys; HET: CTP; 1.50A {Escherichia coli K12} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 1h3m_A
Probab=99.91  E-value=1.2e-23  Score=166.49  Aligned_cols=221  Identities=12%  Similarity=0.134  Sum_probs=141.0

Q ss_pred             CCCCCCEEEEEECCCCCCCCCC---CEECCCCCCCHHHHHHHHHHHC-CCCEEEEECCC--CCHHHHCCCCCCCCCCCCC
Q ss_conf             7555656999817767888988---5000006722668999999967-99869998683--3000100012222222222
Q gi|254780765|r    4 QHIKEKVLVIIPARLNSMRFPK---KILADINGLPMILHTAIRARKA-NIGRVIVAVDD--TKINEIVLQAGFESVMTHT   77 (268)
Q Consensus         4 ~~~~~ki~~iIpAR~~S~Rlp~---K~L~~i~gkplI~~v~~~a~~s-~~~~viVaTdd--~~I~~~~~~~g~~~i~t~~   77 (268)
                      ++-+++|+|||||++.|+||+.   |+|++++|+|||+|+++++.++ .+++|+|+++.  ..+.+........+....+
T Consensus         2 ~~~~M~i~AIILAaG~gtRm~~~~PK~l~~l~gkplI~~~i~~l~~~~~i~~IiVv~~~~~~~~~~~~~~~~~~i~~~~~   81 (236)
T 1i52_A            2 ATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDG   81 (236)
T ss_dssp             ---CCCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGGSGGGGCTTEEEEEC
T ss_pred             CCCCCCEEEEEECCCCCEECCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECC
T ss_conf             97878628999789766008889896161799988999999999708897779872272578888876403764315438


Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECC
Q ss_conf             34565204899997422334521000015221010000012233321013443211111122011003754431465145
Q gi|254780765|r   78 SHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASP  157 (268)
Q Consensus        78 ~~~~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~  157 (268)
                      . ..+++.+..++..+.   +.++|+..+||.||+++++++.++..+.+...+.+. ..+..+.        ++.+....
T Consensus        82 ~-~~~~~sv~~~~~~~~---d~~~vl~~~~~~p~i~~~~~~~l~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~  148 (236)
T 1i52_A           82 G-DERADSVLAGLKAAG---DAQWVLVHDAARPCLHQDDLARLLALSETSRTGGIL-AAPVRDT--------MKRAEPGK  148 (236)
T ss_dssp             C-SSHHHHHHHHHHTST---TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCEEE-EEECCSC--------EEEECTTS
T ss_pred             C-CCCHHHHHHHHHHCC---CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEE-ECCCCCE--------EEEEECCC
T ss_conf             8-632089999998648---998899726768679999999999999755886896-2255411--------35880353


Q ss_pred             CCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHC-CCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             444200111103577753111223520135520023333320-7998211120844798997896266998458888768
Q gi|254780765|r  158 SENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQ-LSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVD  236 (268)
Q Consensus       158 ~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~-l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~ID  236 (268)
                      +.     ..   +   ......++...+.++|+++.|..... ......+.....+  -+..+|++++++..+...+.|+
T Consensus       149 ~~-----i~---~---~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~tD~~~--l~~~~g~kv~~v~~~~~n~kIt  215 (236)
T 1i52_A          149 NA-----IA---H---TVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEAS--ALEYCGFHPQLVEGRADNIKVT  215 (236)
T ss_dssp             SS-----EE---E---EECCTTCEEEEEEEEEEHHHHHHHHHHHHHTTCCCCSHHH--HHHHTTCCCEEEECCTTCCCCC
T ss_pred             CC-----CC---C---CCCCHHHHEECCCEEECHHHHHHHHHHHHHCCCCCCHHHH--HHHHCCCCEEEEECCCHHCCCC
T ss_conf             22-----44---4---5473022100366376299999999999855998750999--9997799659997580004889


Q ss_pred             CHHHHHHHHHHHHC
Q ss_conf             99999999999730
Q gi|254780765|r  237 TTNDLEKVRTLIPH  250 (268)
Q Consensus       237 t~~Dl~~v~~il~~  250 (268)
                      ||+||+.||.+|++
T Consensus       216 tpeDl~~Ae~~L~~  229 (236)
T 1i52_A          216 RPEDLALAEFYLTR  229 (236)
T ss_dssp             SHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHH
T ss_conf             99999999999987