HHsearch results for GI: 254780765 and protein with PDBid: 1i52_A
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP), isoprenoid biosynthesys; HET: CTP; 1.50A {Escherichia coli K12} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 1h3m_A
Probab=99.91 E-value=1.2e-23 Score=166.49 Aligned_cols=221 Identities=12% Similarity=0.134 Sum_probs=141.0
Q ss_pred CCCCCCEEEEEECCCCCCCCCC---CEECCCCCCCHHHHHHHHHHHC-CCCEEEEECCC--CCHHHHCCCCCCCCCCCCC
Q ss_conf 7555656999817767888988---5000006722668999999967-99869998683--3000100012222222222
Q gi|254780765|r 4 QHIKEKVLVIIPARLNSMRFPK---KILADINGLPMILHTAIRARKA-NIGRVIVAVDD--TKINEIVLQAGFESVMTHT 77 (268)
Q Consensus 4 ~~~~~ki~~iIpAR~~S~Rlp~---K~L~~i~gkplI~~v~~~a~~s-~~~~viVaTdd--~~I~~~~~~~g~~~i~t~~ 77 (268)
++-+++|+|||||++.|+||+. |+|++++|+|||+|+++++.++ .+++|+|+++. ..+.+........+....+
T Consensus 2 ~~~~M~i~AIILAaG~gtRm~~~~PK~l~~l~gkplI~~~i~~l~~~~~i~~IiVv~~~~~~~~~~~~~~~~~~i~~~~~ 81 (236)
T 1i52_A 2 ATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDG 81 (236)
T ss_dssp ---CCCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGGSGGGGCTTEEEEEC
T ss_pred CCCCCCEEEEEECCCCCEECCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECC
T ss_conf 97878628999789766008889896161799988999999999708897779872272578888876403764315438
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECC
Q ss_conf 34565204899997422334521000015221010000012233321013443211111122011003754431465145
Q gi|254780765|r 78 SHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASP 157 (268)
Q Consensus 78 ~~~~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~ 157 (268)
. ..+++.+..++..+. +.++|+..+||.||+++++++.++..+.+...+.+. ..+..+. ++.+....
T Consensus 82 ~-~~~~~sv~~~~~~~~---d~~~vl~~~~~~p~i~~~~~~~l~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~ 148 (236)
T 1i52_A 82 G-DERADSVLAGLKAAG---DAQWVLVHDAARPCLHQDDLARLLALSETSRTGGIL-AAPVRDT--------MKRAEPGK 148 (236)
T ss_dssp C-SSHHHHHHHHHHTST---TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCEEE-EEECCSC--------EEEECTTS
T ss_pred C-CCCHHHHHHHHHHCC---CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEE-ECCCCCE--------EEEEECCC
T ss_conf 8-632089999998648---998899726768679999999999999755886896-2255411--------35880353
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHC-CCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf 444200111103577753111223520135520023333320-7998211120844798997896266998458888768
Q gi|254780765|r 158 SENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQ-LSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVD 236 (268)
Q Consensus 158 ~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~-l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~ID 236 (268)
+. .. + ......++...+.++|+++.|..... ......+.....+ -+..+|++++++..+...+.|+
T Consensus 149 ~~-----i~---~---~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~tD~~~--l~~~~g~kv~~v~~~~~n~kIt 215 (236)
T 1i52_A 149 NA-----IA---H---TVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEAS--ALEYCGFHPQLVEGRADNIKVT 215 (236)
T ss_dssp SS-----EE---E---EECCTTCEEEEEEEEEEHHHHHHHHHHHHHTTCCCCSHHH--HHHHTTCCCEEEECCTTCCCCC
T ss_pred CC-----CC---C---CCCCHHHHEECCCEEECHHHHHHHHHHHHHCCCCCCHHHH--HHHHCCCCEEEEECCCHHCCCC
T ss_conf 22-----44---4---5473022100366376299999999999855998750999--9997799659997580004889
Q ss_pred CHHHHHHHHHHHHC
Q ss_conf 99999999999730
Q gi|254780765|r 237 TTNDLEKVRTLIPH 250 (268)
Q Consensus 237 t~~Dl~~v~~il~~ 250 (268)
||+||+.||.+|++
T Consensus 216 tpeDl~~Ae~~L~~ 229 (236)
T 1i52_A 216 RPEDLALAEFYLTR 229 (236)
T ss_dssp SHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHH
T ss_conf 99999999999987