HHsearch results for GI: 254780765 and protein with PDBid: 3okr_A

>3okr_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TB structural genomics consortium, TBSGC, tryptophan synthes 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase; 2.40A {Mycobacterium tuberculosis}
Probab=99.93  E-value=1.1e-24  Score=173.06  Aligned_cols=218  Identities=17%  Similarity=0.171  Sum_probs=143.3

Q ss_pred             CCCCEEEEEECCCCCCCCC---CCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             5565699981776788898---850000067226689999999679-986999868330001000122222222223456
Q gi|254780765|r    6 IKEKVLVIIPARLNSMRFP---KKILADINGLPMILHTAIRARKAN-IGRVIVAVDDTKINEIVLQAGFESVMTHTSHQS   81 (268)
Q Consensus         6 ~~~ki~~iIpAR~~S~Rlp---~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~   81 (268)
                      .+++|+|||||++.|+||.   .|+|++|+|+|||+|+++++++++ ++.|+|+++.+.+.......+-.+.+.    ..
T Consensus         4 ~~~~v~AIILAaG~GtRm~s~~pK~l~~i~gkpli~~~l~~~~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~v----~g   79 (231)
T 3okr_A            4 EAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIV----AG   79 (231)
T ss_dssp             --CCEEEEEECC----------CGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGGGCEEE----EC
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEE----CC
T ss_conf             88958999935888801897989416089986899999999974376026850240567887641014513795----38


Q ss_pred             CCHH---HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC-CCCEEEEECC
Q ss_conf             5204---89999742233452100001522101000001223332101344321111112201100375-4431465145
Q gi|254780765|r   82 GSDR---IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDP-NIVKIVVASP  157 (268)
Q Consensus        82 GTdR---i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~-n~vKvi~~~~  157 (268)
                      |++|   ++.++..+....+.++|+.++||.||++++++++++..+.+.. +.+.++.+..+.....+. +.+.-+.   
T Consensus        80 g~~r~~s~~~~l~~~~~~~~~~~vli~d~~~P~i~~~~i~~l~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~v~~~~---  155 (231)
T 3okr_A           80 GSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGY-AAVVPVLPLSDTIKAVDANGVVLGTP---  155 (231)
T ss_dssp             CSSHHHHHHHHHHTTC---CCSEEEECCTTCTTCCHHHHHHHHHHHHTTC-SEEEEEECCSSEEEEECTTSBEEECC---
T ss_pred             CCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCEEEECCCCEEEECC---
T ss_conf             84341668878999851257677998236676445999999999998558-71378642267089976998388224---


Q ss_pred             CCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHH-HHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             4442001111035777531112235201355200233333207998211120844-798997896266998458888768
Q gi|254780765|r  158 SENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLE-QLRALEARMRIDVKIVQSNAMSVD  236 (268)
Q Consensus       158 ~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lE-qLR~leng~~I~~~~~~~~~~~ID  236 (268)
                                        ++..++...+-++|+.+.|.+........++..|-.| .-.+..+|.++.++..+...+.|+
T Consensus       156 ------------------~r~~~~~~~tp~~f~~~~l~~~~~~~~~~~~~~~~TD~~~l~~~~g~~v~~v~g~~~N~KIt  217 (231)
T 3okr_A          156 ------------------ERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKIT  217 (231)
T ss_dssp             ------------------TTSCEEEECSCEEEEHHHHHHHTC----------CCCHHHHHHHTTCCCEEEECCGGGCCCC
T ss_pred             ------------------CHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf             ------------------67763666467313299999999985553048986729999997799769997480006859


Q ss_pred             CHHHHHHHHHHHH
Q ss_conf             9999999999973
Q gi|254780765|r  237 TTNDLEKVRTLIP  249 (268)
Q Consensus       237 t~~Dl~~v~~il~  249 (268)
                      ||+||+.||++|+
T Consensus       218 tpeDL~~ae~ilk  230 (231)
T 3okr_A          218 TKLDLLLAQAIVR  230 (231)
T ss_dssp             SHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHC
T ss_conf             9999999999868