RPSBLAST alignment of GI: 254780765 and protein with PDBid: 1i52

>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP), isoprenoid biosynthesys; HET: CTP; 1.50A {Escherichia coli K12} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 1h3m_A Length = 236
 Score = 43.0 bits (100), Expect = 7e-05
 Identities = 32/259 (12%), Positives = 70/259 (27%), Gaps = 31/259 (11%)

Query: 1   MKDQHIKEKVLVIIPARLNSMRFPKKI---LADINGLPMILHTAIRARKANIGRVIVAVD 57
           M   H+   V  ++PA     R   +       I    ++ H+          + +V   
Sbjct: 1   MATTHLD--VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAI 58

Query: 58  DTKINEIVLQAGFESVMTHTSHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEIL 117
               +         +    T    G +R    L  + +   +Q ++   A  P +  + L
Sbjct: 59  SPGDSRFAQLP-LANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDL 117

Query: 118 ASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFRALYFTRTKTPHGT 177
           A +                 +  S       I+   V    +           T   +  
Sbjct: 118 ARL-----------------LALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRN-- 158

Query: 178 GPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQ--SNAMSV 235
              +  L    + RE L          L +  ++    +         ++V+  ++ + V
Sbjct: 159 -GLWHALTPQFFPRELLH---DCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKV 214

Query: 236 DTTNDLEKVRTLIPHDHHK 254
               DL      +    H+
Sbjct: 215 TRPEDLALAEFYLTRTIHQ 233