RPSBLAST alignment of GI: 254780765 and protein with PDBid: 1vic

>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* Length = 262
 Score =  142 bits (359), Expect = 6e-35
 Identities = 87/251 (34%), Positives = 132/251 (52%), Gaps = 12/251 (4%)

Query: 9   KVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKANIGRVIVAVDDTKINEIVLQA 68
              VIIPAR  S R P K LADI G PMI H   +A ++   RVI+A D+  + ++    
Sbjct: 2   SFTVIIPARFASSRLPGKPLADIKGKPMIQHVFEKALQSGASRVIIATDNENVADVAKSF 61

Query: 69  GFESVMTHTSHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPI 128
           G E  MT  +H SG++R+ E +  +     ++IIVN+Q D P I P I+  V   L    
Sbjct: 62  GAEVCMTSVNHNSGTERLAEVVEKLA-IPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 120

Query: 129 VDIGTLGTRIHGSTDPDDPNIVKIVVA----------SPSENGCFRALYFTRTKTPHGTG 178
           V++ +L  +IH + +  +PN VK++            S       + +     +    + 
Sbjct: 121 VNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSD 180

Query: 179 PFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSN-AMSVDT 237
            + +H+GIYAYR   +K++ Q +P+ LE  E LEQLR L    RI V++ +   A+ VDT
Sbjct: 181 AYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDT 240

Query: 238 TNDLEKVRTLI 248
             DLEKVR ++
Sbjct: 241 AEDLEKVRAIL 251