HHsearch alignment for GI: 254780766 and conserved domain: COG0410
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].
Probab=96.93 E-value=0.00091 Score=43.81 Aligned_cols=78 Identities=18% Similarity=0.245 Sum_probs=55.3
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHCCCC---EEEEECCHHHHH--HHH
Q ss_conf 312205899999999999999999870899789980122015989999999997417980---999806967854--321
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDIGSQ---IFMTGTDKSVFD--SLN 359 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~~~Q---v~iTt~~~~~~~--~~~ 359 (375)
T Consensus 135 G~LSGGEQQMLAiaRALm---------~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlL-VEQn~~~Al~ia 204 (237)
T COG0410 135 GTLSGGEQQMLAIARALM---------SRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILL-VEQNARFALEIA 204 (237)
T ss_pred CCCCHHHHHHHHHHHHHH---------CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHH
T ss_conf 677819999999999996---------1998899658866768899999999999999748948999-942588998740
Q ss_pred CCEEEEEECCCEEEE
Q ss_conf 260079972896895
Q gi|254780766|r 360 ETAKFMRISNHQALC 374 (375)
Q Consensus 360 ~~~~~~~i~~g~~~~ 374 (375)
T Consensus 205 Dr--~yvle~Griv~ 217 (237)
T COG0410 205 DR--GYVLENGRIVL 217 (237)
T ss_pred CE--EEEEECCEEEE
T ss_conf 87--99986798987