HHsearch alignment for GI: 254780766 and conserved domain: COG1196

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning].
Probab=99.88  E-value=1.5e-21  Score=159.90  Aligned_cols=141  Identities=23%  Similarity=0.393  Sum_probs=102.8

Q ss_pred             EEEEEEEEECCCCHHH-EEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC---CCCCCCHHHHHHCCCCC-----EEEE
Q ss_conf             1899999922325455-3673279879998689986444899999972886---66678736887489832-----0589
Q gi|254780766|r    5 IKIKFLNISEFRNYAS-LRLVFDAQHTIFVGDNGVGKTNILEAISFLSPGR---GFRRASYADVTRIGSPS-----FFST   75 (375)
Q Consensus         5 M~i~~l~i~nFR~~~~-~~i~f~~~~n~i~G~NG~GKT~iLEAI~~l~~gk---sfR~~~~~~li~~~~~~-----~~~~   75 (375)
T Consensus         1 m~lk~i~l~gFKSF~~~~~i~f~~~~t~IvGPNGSGKSNI~DAi~fVLG~~s~k~lRa~~~~DlIf~g~~~r~~~~~A~V   80 (1163)
T COG1196           1 MYLKRIELKGFKSFADPTEINFSPGFTAIVGPNGSGKSNIVDAIRFVLGEQSAKNLRASKMSDLIFAGSGNRKPANYAEV   80 (1163)
T ss_pred             CCEEEEEEECCEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCCCCCCCCCEEEE
T ss_conf             91379998785624783686169996168899988668899999998389502110425726675188987888770389


Q ss_pred             EEEECCCCC-----CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE---------ECCHHHCCCCCCHHHH
Q ss_conf             888628532-----00266753002466333211257743332101233345202---------1001100126872341
Q gi|254780766|r   76 FARVEGMEG-----LADISIKLETRDDRSVRCLQINDVVIRVVDELNKHLRISWL---------VPSMDRIFSGLSMERR  141 (375)
Q Consensus        76 ~~~~~~~~~-----~~~~~~~~~~~~~~~~k~~~~n~~~~~~~~~l~~~l~~v~~---------~p~~~~li~~~p~~RR  141 (375)
T Consensus        81 ~l~fdN~d~~~~~~~~ei~v~Rri~r~g~-S~Y~INg~~~~~-~dI~~l~~~~gi~~~~~~iV~QG~V~~i~~~kp~err  158 (1163)
T COG1196          81 ELTFDNSDNTLPLEYEEISVTRRIYRDGE-SEYYINGEKVRL-KDIQDLLADSGIGKESYSIVSQGKVEEIINAKPEERR  158 (1163)
T ss_pred             EEEEECCCCCCCCCCCEEEEEEEEEECCC-EEEEECCCEEEH-HHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCHHHHH
T ss_conf             99986788767777763899999997797-389988907409-9999999875999888635454518999759989999


Q ss_pred             HHCCCC
Q ss_conf             210100
Q gi|254780766|r  142 RFLDRM  147 (375)
Q Consensus       142 ~flD~~  147 (375)
T Consensus       159 ~iiEEa  164 (1163)
T COG1196         159 KLIEEA  164 (1163)
T ss_pred             HHHHHH
T ss_conf             999999