HHsearch alignment for GI: 254780766 and conserved domain: COG1196
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning].
Probab=99.88 E-value=1.5e-21 Score=159.90 Aligned_cols=141 Identities=23% Similarity=0.393 Sum_probs=102.8
Q ss_pred EEEEEEEEECCCCHHH-EEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC---CCCCCCHHHHHHCCCCC-----EEEE
Q ss_conf 1899999922325455-3673279879998689986444899999972886---66678736887489832-----0589
Q gi|254780766|r 5 IKIKFLNISEFRNYAS-LRLVFDAQHTIFVGDNGVGKTNILEAISFLSPGR---GFRRASYADVTRIGSPS-----FFST 75 (375)
Q Consensus 5 M~i~~l~i~nFR~~~~-~~i~f~~~~n~i~G~NG~GKT~iLEAI~~l~~gk---sfR~~~~~~li~~~~~~-----~~~~ 75 (375)
T Consensus 1 m~lk~i~l~gFKSF~~~~~i~f~~~~t~IvGPNGSGKSNI~DAi~fVLG~~s~k~lRa~~~~DlIf~g~~~r~~~~~A~V 80 (1163)
T COG1196 1 MYLKRIELKGFKSFADPTEINFSPGFTAIVGPNGSGKSNIVDAIRFVLGEQSAKNLRASKMSDLIFAGSGNRKPANYAEV 80 (1163)
T ss_pred CCEEEEEEECCEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCCCCCCCCCEEEE
T ss_conf 91379998785624783686169996168899988668899999998389502110425726675188987888770389
Q ss_pred EEEECCCCC-----CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE---------ECCHHHCCCCCCHHHH
Q ss_conf 888628532-----00266753002466333211257743332101233345202---------1001100126872341
Q gi|254780766|r 76 FARVEGMEG-----LADISIKLETRDDRSVRCLQINDVVIRVVDELNKHLRISWL---------VPSMDRIFSGLSMERR 141 (375)
Q Consensus 76 ~~~~~~~~~-----~~~~~~~~~~~~~~~~k~~~~n~~~~~~~~~l~~~l~~v~~---------~p~~~~li~~~p~~RR 141 (375)
T Consensus 81 ~l~fdN~d~~~~~~~~ei~v~Rri~r~g~-S~Y~INg~~~~~-~dI~~l~~~~gi~~~~~~iV~QG~V~~i~~~kp~err 158 (1163)
T COG1196 81 ELTFDNSDNTLPLEYEEISVTRRIYRDGE-SEYYINGEKVRL-KDIQDLLADSGIGKESYSIVSQGKVEEIINAKPEERR 158 (1163)
T ss_pred EEEEECCCCCCCCCCCEEEEEEEEEECCC-EEEEECCCEEEH-HHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCHHHHH
T ss_conf 99986788767777763899999997797-389988907409-9999999875999888635454518999759989999
Q ss_pred HHCCCC
Q ss_conf 210100
Q gi|254780766|r 142 RFLDRM 147 (375)
Q Consensus 142 ~flD~~ 147 (375)
T Consensus 159 ~iiEEa 164 (1163)
T COG1196 159 KLIEEA 164 (1163)
T ss_pred HHHHHH
T ss_conf 999999