HHsearch alignment for GI: 254780766 and conserved domain: COG3840
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism].
Probab=98.07 E-value=3.6e-05 Score=52.93 Aligned_cols=78 Identities=22% Similarity=0.292 Sum_probs=59.9
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHCC
Q ss_conf 12205899999999999999999870899789980122015989999999997417----98099980696785432126
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNET 361 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~~ 361 (375)
T Consensus 129 ~LSGGqRQRvALARcl---------vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~ 199 (231)
T COG3840 129 ELSGGQRQRVALARCL---------VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADR 199 (231)
T ss_pred CCCCHHHHHHHHHHHH---------HCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHC
T ss_conf 2474077899999988---------0268757754811331978899999999999884287799995788899976520
Q ss_pred EEEEEECCCEEEE
Q ss_conf 0079972896895
Q gi|254780766|r 362 AKFMRISNHQALC 374 (375)
Q Consensus 362 ~~~~~i~~g~~~~ 374 (375)
T Consensus 200 --~~~l~~Gri~~ 210 (231)
T COG3840 200 --VVFLDNGRIAA 210 (231)
T ss_pred --EEEEECCEEEE
T ss_conf --69985777876