HHsearch alignment for GI: 254780766 and conserved domain: COG3950

>COG3950 Predicted ATP-binding protein involved in virulence [General function prediction only].

Probab=99.84  E-value=4.1e-20  Score=150.46  Aligned_cols=95  Identities=17%  Similarity=0.216  Sum_probs=68.6

Q ss_pred             CCCCCHHHHHCCCHHHHHHHHHHHHH----HHH-HHHHHCC--CCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEE
Q ss_conf             24551023312205899999999999----999-9998708--99789980122015989999999997417--980999
Q gi|254780766|r  277 YCDKAITIAHGSTGEQKVVLVGIFLA----HAR-LISNTTG--FAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFM  347 (375)
Q Consensus       277 ~~~~~~~~~~~S~Gqqk~~~l~l~La----~~~-~~~~~~~--~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~i  347 (375)
T Consensus       252 ~~~geI~ls~lSdg~Rt~~Alvadiarr~v~LNp~Lsd~la~~tpgivLiDeIdlflhP~WQQqi~qkL~saFp~IQfIv  331 (440)
T COG3950         252 GNGGEIPLSELSDGPRTKFALVADIARRCVVLNPYLSDALAKLTPGIVLIDEIDLFLHPKWQQQINQKLLSAFPEIQFIV  331 (440)
T ss_pred             CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCHHHHHHH
T ss_conf             77771010330311488999999998889636821126544489866974220110288899999999986443450023


Q ss_pred             EECCHHHHHHHH-CCEEEEEECCCE
Q ss_conf             806967854321-260079972896
Q gi|254780766|r  348 TGTDKSVFDSLN-ETAKFMRISNHQ  371 (375)
Q Consensus       348 Tt~~~~~~~~~~-~~~~~~~i~~g~  371 (375)
T Consensus       332 stHsP~vlsTv~~esIrlln~~~gd  356 (440)
T COG3950         332 STHSPFVLSTVNGESIRLLNLSSGD  356 (440)
T ss_pred             HCCCCEEEEECCCCEEEEEECCCCC
T ss_conf             3388658983162206874115766