HHsearch alignment for GI: 254780766 and conserved domain: COG4988

>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].

Probab=97.79  E-value=0.00022  Score=47.82  Aligned_cols=78  Identities=17%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCEE
Q ss_conf             12205899999999999999999870899789980122015989999999997417--9809998069678543212600
Q gi|254780766|r  286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETAK  363 (375)
Q Consensus       286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~~  363 (375)
T Consensus       456 ~LSgGQ~QRlaLARA---------ll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~---~D~  523 (559)
T COG4988         456 GLSGGQAQRLALARA---------LLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD---ADR  523 (559)
T ss_pred             CCCHHHHHHHHHHHH---------HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHC---CCE
T ss_conf             778999999999998---------55888889854875679876799999999999727869999767377854---998


Q ss_pred             EEEECCCEEEEC
Q ss_conf             799728968959
Q gi|254780766|r  364 FMRISNHQALCI  375 (375)
Q Consensus       364 ~~~i~~g~~~~~  375 (375)
T Consensus       524 I~vld~G~l~~~  535 (559)
T COG4988         524 IVVLDNGRLVEQ  535 (559)
T ss_pred             EEEECCCCEECC
T ss_conf             999648833225