HHsearch alignment for GI: 254780766 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=98.25 E-value=1.1e-05 Score=56.44 Aligned_cols=79 Identities=20% Similarity=0.156 Sum_probs=61.9
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHC
Q ss_conf 312205899999999999999999870899789980122015989999999997417----9809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 163 ~eLSGGqqQRVaiARALa---------~~P~iLL~DEP~SALDp~~r~~i~~~l~~L~~~~~~TiifVTHDl~eA~~laD 233 (400)
T PRK10070 163 DELSGGMRQRVGLARALA---------INPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGD 233 (400)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCC
T ss_conf 448999999999999986---------29999997087654598999999999999999859999998999999998699
Q ss_pred CEEEEEECCCEEEE
Q ss_conf 60079972896895
Q gi|254780766|r 361 TAKFMRISNHQALC 374 (375)
Q Consensus 361 ~~~~~~i~~g~~~~ 374 (375)
T Consensus 234 R--IaVM~~G~Ivq 245 (400)
T PRK10070 234 R--IAIMQNGEVVQ 245 (400)
T ss_pred E--EEEEECCEEEE
T ss_conf 9--99998988999