HHsearch alignment for GI: 254780766 and conserved domain: PRK10762
>PRK10762 D-ribose transporter ATP binding protein; Provisional.
Probab=98.36 E-value=2.4e-06 Score=60.60 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=65.1
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCC
Q ss_conf 312205899999999999999999870899789980122015989999999997417---98099980696785432126
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNET 361 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~ 361 (375)
T Consensus 140 ~~LSgG~kQrv~iA~aL~---------~~p~lliLDEPt~~Ld~~~~~~l~~~l~~l~~~g~til~isH~l~~~~~~~dr 210 (501)
T PRK10762 140 GELSIGDQQMVEIAKVLS---------FESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDD 210 (501)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC
T ss_conf 458999999999999984---------59987753587557887888999998878774484147751425766421464
Q ss_pred EEEEEECCCEEEE
Q ss_conf 0079972896895
Q gi|254780766|r 362 AKFMRISNHQALC 374 (375)
Q Consensus 362 ~~~~~i~~g~~~~ 374 (375)
T Consensus 211 --v~vl~~G~iv~ 221 (501)
T PRK10762 211 --VTVLRDGQFIG 221 (501)
T ss_pred --CEEECCCEEEE
T ss_conf --11312781897