HHsearch alignment for GI: 254780766 and conserved domain: PRK11607
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional.
Probab=98.37 E-value=3.4e-06 Score=59.63 Aligned_cols=79 Identities=22% Similarity=0.217 Sum_probs=63.5
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHH----HCCCCEEEEECCHHHHHHHHC
Q ss_conf 3122058999999999999999998708997899801220159899999999974----179809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVT----DIGSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~----~~~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 148 ~~LSGGqrQRVaiArAL~---------~~P~lLllDEPts~LD~~~r~~l~~~l~~l~~~~g~Tii~VTHD~~eA~~laD 218 (377)
T PRK11607 148 HQLSGGQRQRVALARSLA---------KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG 218 (377)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCC
T ss_conf 578986878999999874---------49978996487544799999999999999999739999999989999998699
Q ss_pred CEEEEEECCCEEEE
Q ss_conf 60079972896895
Q gi|254780766|r 361 TAKFMRISNHQALC 374 (375)
Q Consensus 361 ~~~~~~i~~g~~~~ 374 (375)
T Consensus 219 r--I~Vm~~G~Ivq 230 (377)
T PRK11607 219 R--IAIMNRGKFVQ 230 (377)
T ss_pred E--EEEEECCEEEE
T ss_conf 9--99998999999