HHsearch alignment for GI: 254780766 and conserved domain: PRK13537
>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=97.23 E-value=0.00036 Score=46.46 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=25.4
Q ss_pred HHHEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 45536732798-79998689986444899999
Q gi|254780766|r 18 YASLRLVFDAQ-HTIFVGDNGVGKTNILEAIS 48 (375)
Q Consensus 18 ~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~ 48 (375)
T Consensus 21 l~~vs~~V~~Gei~gllGpNGAGKTTli~~l~ 52 (304)
T PRK13537 21 VDGLSFHVQPGECFGLLGPNGAGKTTTLKMLL 52 (304)
T ss_pred ECCEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 83717788699599999998972999999997