HHsearch alignment for GI: 254780766 and conserved domain: PRK13543
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional.
Probab=98.68 E-value=1.6e-07 Score=68.38 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=61.7
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCC
Q ss_conf 312205899999999999999999870899789980122015989999999997417---98099980696785432126
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNET 361 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~ 361 (375)
T Consensus 136 ~~LSgGqkqRv~lA~al~---------~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvl~~tHd~~~~~~~adR 206 (214)
T PRK13543 136 RQLSAGQRKRLALARLWL---------SPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTR 206 (214)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCE
T ss_conf 348999999999999985---------79999998099888999999999999999986799999991998999986999
Q ss_pred EEEEEECCC
Q ss_conf 007997289
Q gi|254780766|r 362 AKFMRISNH 370 (375)
Q Consensus 362 ~~~~~i~~g 370 (375)
T Consensus 207 --i~~L~~G 213 (214)
T PRK13543 207 --MLTLEAA 213 (214)
T ss_pred --EEEEECC
T ss_conf --9998088