HHsearch alignment for GI: 254780766 and conserved domain: PRK13543

>PRK13543 cytochrome c biogenesis protein CcmA; Provisional.
Probab=98.68  E-value=1.6e-07  Score=68.38  Aligned_cols=75  Identities=20%  Similarity=0.273  Sum_probs=61.7

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCC
Q ss_conf             312205899999999999999999870899789980122015989999999997417---98099980696785432126
Q gi|254780766|r  285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNET  361 (375)
Q Consensus       285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~  361 (375)
T Consensus       136 ~~LSgGqkqRv~lA~al~---------~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvl~~tHd~~~~~~~adR  206 (214)
T PRK13543        136 RQLSAGQRKRLALARLWL---------SPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTR  206 (214)
T ss_pred             HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCE
T ss_conf             348999999999999985---------79999998099888999999999999999986799999991998999986999


Q ss_pred             EEEEEECCC
Q ss_conf             007997289
Q gi|254780766|r  362 AKFMRISNH  370 (375)
Q Consensus       362 ~~~~~i~~g  370 (375)
T Consensus       207 --i~~L~~G  213 (214)
T PRK13543        207 --MLTLEAA  213 (214)
T ss_pred             --EEEEECC
T ss_conf             --9998088