HHsearch alignment for GI: 254780766 and conserved domain: TIGR01842

>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.
Probab=96.49  E-value=0.0039  Score=39.64  Aligned_cols=75  Identities=17%  Similarity=0.323  Sum_probs=57.3

Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCCE
Q ss_conf             12205899999999999999999870899789980122015989999999997417---980999806967854321260
Q gi|254780766|r  286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNETA  362 (375)
Q Consensus       286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~~  362 (375)
T Consensus       466 ~LSGGQRQRIaLA---------RAlyG~P~lvvLDEPNsNLD~~GE~AL~~Ai~~lK~rg~tvv~itHRp~lL~~vD-k-  534 (556)
T TIGR01842       466 TLSGGQRQRIALA---------RALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGLVD-K-  534 (556)
T ss_pred             CCCCHHHHHHHHH---------HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH-H-
T ss_conf             7861468999999---------9871798378732889876617899999999999867972899841068999999-9-


Q ss_pred             EEEEECCCEE
Q ss_conf             0799728968
Q gi|254780766|r  363 KFMRISNHQA  372 (375)
Q Consensus       363 ~~~~i~~g~~  372 (375)
T Consensus       535 -Il~l~dG~~  543 (556)
T TIGR01842       535 -ILVLQDGRL  543 (556)
T ss_pred             -HHHHHCCHH
T ss_conf             -999840716