HHsearch alignment for GI: 254780766 and conserved domain: TIGR03410
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=98.69 E-value=1.4e-07 Score=68.77 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=66.8
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHC
Q ss_conf 312205899999999999999999870899789980122015989999999997417----9809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 130 ~~LSGGq~Qrv~iAraL~---------~~P~lLlLDEPt~gLD~~~~~~i~~~i~~l~~~~g~tvl~vtH~l~~~~~~ad 200 (230)
T TIGR03410 130 GDLSGGQQQQLAIARALV---------TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELAD 200 (230)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCC
T ss_conf 119999999999999996---------29988999385226999999999999999997179899999088899999699
Q ss_pred CEEEEEECCCEEEE
Q ss_conf 60079972896895
Q gi|254780766|r 361 TAKFMRISNHQALC 374 (375)
Q Consensus 361 ~~~~~~i~~g~~~~ 374 (375)
T Consensus 201 r--v~vl~~G~iv~ 212 (230)
T TIGR03410 201 R--YYVMERGRVVA 212 (230)
T ss_pred E--EEEEECCEEEE
T ss_conf 9--99995998999