HHsearch alignment for GI: 254780766 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=97.39 E-value=0.00018 Score=48.31 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=28.4
Q ss_pred CCCCHHHEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 232545536732798-79998689986444899999
Q gi|254780766|r 14 EFRNYASLRLVFDAQ-HTIFVGDNGVGKTNILEAIS 48 (375)
Q Consensus 14 nFR~~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~ 48 (375)
T Consensus 14 ~~~al~~vsf~v~~Gei~gllGpNGAGKTTl~~~l~ 49 (301)
T TIGR03522 14 TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIIT 49 (301)
T ss_pred CEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 999973606788598199999999981999999996