HHsearch alignment for GI: 254780766 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.38 E-value=2.3e-11 Score=93.35 Aligned_cols=77 Identities=21% Similarity=0.318 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCCEE
Q ss_conf 2205899999999999999999870899789980122015989999999997417---9809998069678543212600
Q gi|254780766|r 287 GSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNETAK 363 (375)
Q Consensus 287 ~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~~~ 363 (375)
T Consensus 83 LSgG~~Qrv~iaral~---------~~p~llilDEPt~gLD~~~~~~i~~~l~~l~~~G~til~vtH~l~~~~~~~Dr-- 151 (163)
T cd03216 83 LSVGERQMVEIARALA---------RNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADR-- 151 (163)
T ss_pred CCHHHHHHHHHHHHHH---------HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCE--
T ss_conf 9989999999999997---------29999999097557999999999999999987898999993849999986999--
Q ss_pred EEEECCCEEEE
Q ss_conf 79972896895
Q gi|254780766|r 364 FMRISNHQALC 374 (375)
Q Consensus 364 ~~~i~~g~~~~ 374 (375)
T Consensus 152 v~vl~~G~iVa 162 (163)
T cd03216 152 VTVLRDGRVVG 162 (163)
T ss_pred EEEECCCEEEE
T ss_conf 99990999983