>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.

Probab=97.34  E-value=0.0002  Score=48.12  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=27.8

Q ss_pred             CCCHHHEEEECCCC-EEEEECCCCCCHHHHHHHHHHH
Q ss_conf             32545536732798-7999868998644489999997
Q gi|254780766|r   15 FRNYASLRLVFDAQ-HTIFVGDNGVGKTNILEAISFL   50 (375)
Q Consensus        15 FR~~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~~l   50 (375)
T Consensus        35 ~~AL~~isf~i~~GeivgilG~NGaGKSTLl~~i~Gl   71 (224)
T cd03220          35 FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGI   71 (224)
T ss_pred             EEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             6987670789838989999979998199999999758