HHsearch alignment for GI: 254780766 and conserved domain: cd03244
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.32 E-value=1.3e-10 Score=88.57 Aligned_cols=77 Identities=13% Similarity=0.259 Sum_probs=62.4
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCEE
Q ss_conf 12205899999999999999999870899789980122015989999999997417--9809998069678543212600
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETAK 363 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~~ 363 (375)
T Consensus 139 ~LSgGqkQrv~lARal~---------~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~Tvi~itH~l~~~~~-~D--r 206 (221)
T cd03244 139 NLSVGQRQLLCLARALL---------RKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-SD--R 206 (221)
T ss_pred CCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-CC--E
T ss_conf 79999999999999996---------599999997975679999999999999987799899999158899983-99--8
Q ss_pred EEEECCCEEEE
Q ss_conf 79972896895
Q gi|254780766|r 364 FMRISNHQALC 374 (375)
Q Consensus 364 ~~~i~~g~~~~ 374 (375)
T Consensus 207 i~vl~~G~Iv~ 217 (221)
T cd03244 207 ILVLDKGRVVE 217 (221)
T ss_pred EEEEECCEEEE
T ss_conf 99998999999