HHsearch alignment for GI: 254780766 and conserved domain: cd03248

>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=98.33  E-value=4.1e-06  Score=59.10  Aligned_cols=76  Identities=16%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCE
Q ss_conf             312205899999999999999999870899789980122015989999999997417--980999806967854321260
Q gi|254780766|r  285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETA  362 (375)
Q Consensus       285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~  362 (375)
T Consensus       149 ~~LSgGqkQRialARal~---------~~p~ililDEptSaLD~~te~~i~~~l~~~~~~~Tvi~ItH~l~~~~~-~D--  216 (226)
T cd03248         149 SQLSGGQKQRVAIARALI---------RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVER-AD--  216 (226)
T ss_pred             CCCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-CC--
T ss_conf             876999999999999997---------599999997976688999999999999986699999999379999984-99--


Q ss_pred             EEEEECCCEE
Q ss_conf             0799728968
Q gi|254780766|r  363 KFMRISNHQA  372 (375)
Q Consensus       363 ~~~~i~~g~~  372 (375)
T Consensus       217 rIivme~G~I  226 (226)
T cd03248         217 QILVLDGGRI  226 (226)
T ss_pred             EEEEEECCCC
T ss_conf             9999939999