HHsearch alignment for GI: 254780766 and conserved domain: cd03251

>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.76  E-value=0.0014  Score=42.61  Aligned_cols=31  Identities=26%  Similarity=0.458  Sum_probs=24.4

Q ss_pred             HHHEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf             45536732798-79998689986444899999
Q gi|254780766|r   18 YASLRLVFDAQ-HTIFVGDNGVGKTNILEAIS   48 (375)
Q Consensus        18 ~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~   48 (375)
T Consensus        18 L~ninl~i~~Ge~i~IvG~sGsGKSTLl~ll~   49 (234)
T cd03251          18 LRDISLDIPAGETVALVGPSGSGKSTLVNLIP   49 (234)
T ss_pred             EECEEEEECCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             53608998799999999899982999999996