HHsearch alignment for GI: 254780766 and conserved domain: cd03265
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.23 E-value=0.00033 Score=46.64 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=27.7
Q ss_pred CCCCHHHEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 232545536732798-79998689986444899999
Q gi|254780766|r 14 EFRNYASLRLVFDAQ-HTIFVGDNGVGKTNILEAIS 48 (375)
Q Consensus 14 nFR~~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~ 48 (375)
T Consensus 12 ~~~al~~is~~v~~Gei~gllGpNGAGKSTll~~i~ 47 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLT 47 (220)
T ss_pred CEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 999985826798898399999999871999999997