HHsearch alignment for GI: 254780766 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=98.44 E-value=4e-06 Score=59.16 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=59.9
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCEE
Q ss_conf 12205899999999999999999870899789980122015989999999997417--9809998069678543212600
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETAK 363 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~~ 363 (375)
T Consensus 156 ~LSgGQrQri~lARAll---------~~~~iliLDEpts~LD~~te~~i~~~l~~~~~~~TvI~ItHrl~~~~~-~D--~ 223 (257)
T cd03288 156 NFSVGQRQLFCLARAFV---------RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILD-AD--L 223 (257)
T ss_pred CCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-CC--E
T ss_conf 36999999999999995---------599999995876678999999999999997499999999238989985-99--9
Q ss_pred EEEECCCEEEE
Q ss_conf 79972896895
Q gi|254780766|r 364 FMRISNHQALC 374 (375)
Q Consensus 364 ~~~i~~g~~~~ 374 (375)
T Consensus 224 Iivl~~G~Ive 234 (257)
T cd03288 224 VLVLSRGILVE 234 (257)
T ss_pred EEEEECCEEEE
T ss_conf 99998999999