HHsearch alignment for GI: 254780766 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=98.08 E-value=3.7e-05 Score=52.86 Aligned_cols=74 Identities=15% Similarity=0.200 Sum_probs=53.1
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHH-----HHHHHCCCCEEEEECCHHHHHHHHC
Q ss_conf 12205899999999999999999870899789980122015989999999-----9974179809998069678543212
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALF-----RIVTDIGSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll-----~~l~~~~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 140 ~LSGGQ~QRi~iARal~---------~~~~illlDEptsaLD~~~~~~i~~~~i~~~~~~~~~TvI~itH~l~~l~~-aD 209 (218)
T cd03290 140 NLSGGQRQRICVARALY---------QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPH-AD 209 (218)
T ss_pred CCCHHHHHHHHHHHHHH---------HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH-CC
T ss_conf 77989999999999984---------489999998965578867899999999999970799399999069889983-99
Q ss_pred CEEEEEECCCE
Q ss_conf 60079972896
Q gi|254780766|r 361 TAKFMRISNHQ 371 (375)
Q Consensus 361 ~~~~~~i~~g~ 371 (375)
T Consensus 210 --~Iivm~~G~ 218 (218)
T cd03290 210 --WIIAMKDGS 218 (218)
T ss_pred --EEEEECCCC
T ss_conf --999985999