HHsearch alignment for GI: 254780766 and conserved domain: pfam02463

>pfam02463 SMC_N RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Probab=99.21  E-value=5.7e-09  Score=77.75  Aligned_cols=91  Identities=20%  Similarity=0.310  Sum_probs=70.6

Q ss_pred             CCCCCCC-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECC
Q ss_conf             0124551-023312205899999999999999999870899789980122015989999999997417--9809998069
Q gi|254780766|r  275 VDYCDKA-ITIAHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTD  351 (375)
Q Consensus       275 ~~~~~~~-~~~~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~  351 (375)
T Consensus      1066 ~~ppgK~~~~l~~LSGGEKtL~ALaLlFAi~~-----~~PaPFyiLDEIDAaLD~~Nv~~ia~~ik~~s~~sQFIvIS~r 1140 (1162)
T pfam02463      1066 ARPPGKGVKNLDNLSGGEKTLVALALIFAIQK-----YRPAPFYLLDEIDAALDDQNVSRVANYLKELSKNAQFIVISLR 1140 (1162)
T ss_pred             EECCCCCCCCHHHHCHHHHHHHHHHHHHHHHH-----CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             98948968896884878899999999999986-----2898378754866366699999999999974999989998607


Q ss_pred             HHHHHHHHCCEEEEEECCC
Q ss_conf             6785432126007997289
Q gi|254780766|r  352 KSVFDSLNETAKFMRISNH  370 (375)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~g  370 (375)
T Consensus      1141 ~~~~~~Ad~L~GVtm~e~G 1159 (1162)
T pfam02463      1141 EEMLEKADRLVGVYMVENG 1159 (1162)
T ss_pred             HHHHHHHHHEEEEEECCCC
T ss_conf             8999872375887878999