HHsearch alignment for GI: 254780767 and conserved domain: COG0297
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism].
Probab=91.66 E-value=1.1 Score=24.41 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=96.4
Q ss_pred CCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCC--CHHHHHHHHHHHCCCCCEE
Q ss_conf 35588897618765565059985387430123051118999876402735126201663--3688999999604888505
Q gi|254780767|r 177 EVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVS--SQENLVRCIVSKWDISPEI 254 (383)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~i 254 (383)
T Consensus 277 ~nk~~L~~~~gL~~~~~~pl~~~vsRl~~-QKG~dl~~~~i~~~l~~~--~~~vilG~gd~~le~~~~~la~~~~~~~~~ 353 (487)
T COG0297 277 ENKVALQERLGLDVDLPGPLFGFVSRLTA-QKGLDLLLEAIDELLEQG--WQLVLLGTGDPELEEALRALASRHPGRVLV 353 (487)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHC--CEEEEEECCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 89999999809877999758999422420-134558999999999708--369998268278999999999866760999
Q ss_pred EE--ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEE-ECCCCCCEEEEHHHCCCCCCCHH
Q ss_conf 52--0552035788763552331-----1566888762753025405774100001-02467610230244078426124
Q gi|254780767|r 255 II--DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFI-FYIKTWTCALPNLIVDYPLVPEY 326 (383)
Q Consensus 255 ~~--~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~-~lik~~~i~LpNii~~~~ivPEl 326 (383)
T Consensus 354 ~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtv-pIv~~tGGLadTV~~~~~~-------~-~~~--~gtGf 422 (487)
T COG0297 354 VIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTL-PIVRETGGLADTVVDRNEW-------L-IQG--VGTGF 422 (487)
T ss_pred EEEECHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCC-CEECCCCCCCCEECCCCCH-------H-CCC--CEEEE
T ss_conf 96336899999984498999577676875899999871884-4675468865410376611-------0-037--50379
Q ss_pred HCCCCCHHHHHHHHHHH
Q ss_conf 20548989999999998
Q gi|254780767|r 327 FNSMIRSEALVRWIERL 343 (383)
Q Consensus 327 iQ~~~~~~~i~~~~~~l 343 (383)
T Consensus 423 ~f~~~~~~~l~~al~rA 439 (487)
T COG0297 423 LFLQTNPDHLANALRRA 439 (487)
T ss_pred EEECCCHHHHHHHHHHH
T ss_conf 98269989999999999