HHsearch alignment for GI: 254780767 and conserved domain: COG0438
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=92.15 E-value=0.99 Score=24.76 Aligned_cols=151 Identities=21% Similarity=0.223 Sum_probs=85.8
Q ss_pred EEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCH-HHHHHHHHHHCCCCCEEEEEC----CCCHHHHHHH
Q ss_conf 05998538743012305111899987640273512620166336-889999996048885055205----5203578876
Q gi|254780767|r 194 KILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQ-ENLVRCIVSKWDISPEIIIDK----EQKKQVFMTC 268 (383)
Q Consensus 194 ~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~----~~~~~~l~~s 268 (383)
T Consensus 200 ~~i~~~g~-~~~-~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 277 (381)
T COG0438 200 FVVLYVGR-LDP-EKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASA 277 (381)
T ss_pred EEEEEECC-CCC-CCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHC
T ss_conf 79999648-865-4799999999998532158648999995341288999999970888878991778989999999728
Q ss_pred HHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHH
Q ss_conf 3552331-----15668887627530254057741000010246761023024407842612420548989999999998
Q gi|254780767|r 269 NAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERL 343 (383)
Q Consensus 269 d~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~l 343 (383)
T Consensus 278 ~~~v~ps~~e~~~~~~~Ea~a~g~pv-i~~~~~~~~~~~~~~~-----------~g~-~~~----~-~~~~~~~~~i~~~ 339 (381)
T COG0438 278 DVFVLPSLSEGFGLVLLEAMAAGTPV-IASDVGGIPEVVEDGE-----------TGL-LVP----P-GDVEELADALEQL 339 (381)
T ss_pred CEEEECCCCCCCCHHHHHHHHHCCEE-EECCCCCHHHHHCCCC-----------EEE-EEC----C-CCHHHHHHHHHHH
T ss_conf 09991786445588999999849869-9958998688430697-----------069-988----9-9999999999999
Q ss_pred HCCHHHHHHHHH-HHHHHHHHH
Q ss_conf 449899999999-999999983
Q gi|254780767|r 344 SQDTLQRRAMLH-GFENLWDRM 364 (383)
Q Consensus 344 l~d~~~r~~~~~-~~~~~~~~L 364 (383)
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 340 LEDPELREELGEAARERVEEEF 361 (381)
T ss_pred HHCHHHHHHHHHHHHHHHHHHC
T ss_conf 8697999999999999999866