HHsearch alignment for GI: 254780767 and conserved domain: PRK01021
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=100.00 E-value=0 Score=805.15 Aligned_cols=372 Identities=26% Similarity=0.462 Sum_probs=336.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 59999768214789999999999738998399997178999478806504445311013674664599999999998610
Q gi|254780767|r 5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELI 84 (383)
Q Consensus 5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i 84 (383)
T Consensus 228 ~~FI~AGE~SGD~lGa~Li~~Lk~~~-P~i~F~GVGGp~M~~eGl~slf~me~lsVMG~~EVL~~lp~L~~~~~~l~~~i 306 (607)
T PRK01021 228 SCFLSAGEASGDTLGGNLLKEIKALY-PDIRCFGVGGPQMRQEGLEPLFNMEEFQVSGFWEVLLSLFKLYYRYRKLYKTI 306 (607)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHC-CCCEEEECCHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75799268625577999999998549-89889963779998768861244677101148999988999999999999999
Q ss_pred CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 01288868985117765799998663013463111100221100366355799999864015677422320025531476
Q gi|254780767|r 85 VSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGPPTTF 164 (383)
Q Consensus 85 ~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~~~f 164 (383)
T Consensus 307 ~~~~PD~~I~ID~PdFNlrlak~lkk~gi~ik~vhYVsPsVWAWr~~R~k~i~~~vD~~l~lfPFE~~~~~~-~g~~~~y 385 (607)
T PRK01021 307 LKENPETVICIDFPDFHFLLIKKLRKCGYKGKIIHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQGLFKN-SPLRTVY 385 (607)
T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHEECCCCCHHHHHC-CCCCCEE
T ss_conf 861999999958998788999999972899986899788368866217999999886730526778899950-7998379
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC-CCHHHHHHH
Q ss_conf 3882112210013558889761876556505998538743012305111899987640273512620166-336889999
Q gi|254780767|r 165 VGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV-SSQENLVRC 243 (383)
Q Consensus 165 VGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~-~~~~~~~~~ 243 (383)
T Consensus 386 VGHPl~e~i~~~~~~~~~r~~l-~~~~k~IIALLPGSR~SEI~RlLPI~~~ai~~~~l~~-~~~~lV~~a~p~~~~~i~e 463 (607)
T PRK01021 386 LGHPLVETISNFQPCASWKEQL-LPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAQ-THQLLVSSANPKYDHLILD 463 (607)
T ss_pred ECCCCHHHCCCCCCCHHHHHHC-CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCHHHHHHHHH
T ss_conf 7896012022347745699861-7788988999089978999987499999999872446-7649995687668899999
Q ss_pred HHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEEE-ECCCC--CCEEEEHHHCCC
Q ss_conf 996048885055205520357887635523311566888762753025405774100001-02467--610230244078
Q gi|254780767|r 244 IVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYKSEWIVNFFI-FYIKT--WTCALPNLIVDY 320 (383)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i~-~lik~--~~i~LpNii~~~ 320 (383)
T Consensus 464 ~l~~~~~~~~~II~~~~kyeam~aSDaALaASGTATLE~ALagvPmVVaYKlnpLTyfIAK~LvKI~lp~vsLPNILagr 543 (607)
T PRK01021 464 VLQQEGCLHSKIVPSQFRYELMRECDCALAKCGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKILLPAYSLPNIILGS 543 (607)
T ss_pred HHHHCCCCCCEECCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCC
T ss_conf 99864898845717325899998588998887789999998388989999678279999999997257512113011699
Q ss_pred CCCCHHH--CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 4261242--054898999999999844989999999999999998389999899999999986
Q gi|254780767|r 321 PLVPEYF--NSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQV 381 (383)
Q Consensus 321 ~ivPEli--Q~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~ 381 (383)
T Consensus 544 ~VVPElI~gQ~D~~PE~iAaAl-~lL~~p~~~ekq~~~c~~~~~~~~~~~~~~~e~~~~~~~~ 605 (607)
T PRK01021 544 VIFPEFIGGKKDFHPEEVAAAL-DILKTSQSKEKQKEACRDLYKAMTTSAITSKECLKRIFET 605 (607)
T ss_pred CCCCCCCCCCCCCCHHHHHHHH-HHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 8666636776658989999999-9871915679999999999999871788789999999863