HHsearch alignment for GI: 254780767 and conserved domain: TIGR02149
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor ..
Probab=98.51 E-value=2.6e-06 Score=61.57 Aligned_cols=332 Identities=17% Similarity=0.199 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHHHHHC--CCEEEECHHH-CCEEEH--HHHHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 8999999999973899839999717899947--8806504445-311013--6746645999999999986100128886
Q gi|254780767|r 17 LLAGDLIKSLKEMVSYPINLVGVGGPSLQKE--GLVSLFDFSE-LSVIGI--MQVVRHLPQFIFRINQTVELIVSSKPDV 91 (383)
Q Consensus 17 ~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~--G~~~~~~~~~-l~v~G~--~evl~~~~~~~~~~~~~~~~i~~~~Pd~ 91 (383)
T Consensus 20 VHv~~L~~~L~~l~--~vdVr~fG~~rteadiPaiPna~~~~gsL~v~~Y~~~~~L~~G-----ldPran~aL~tfSvDL 92 (416)
T TIGR02149 20 VHVEELARELARLV--DVDVRCFGDKRTEADIPAIPNAFFSEGSLKVLGYRPWSELKEG-----LDPRANKALKTFSVDL 92 (416)
T ss_pred HHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCC-----CCHHHHHHHCCHHHHH
T ss_conf 11888999998653--4004643887442334566622168983288740787432256-----7722575402311578
Q ss_pred EEEECHHHH--------HHHHHHHHHHHCCCCCCE---EEECCCCCCCCCCCHHHH--------------HHHHHH----
Q ss_conf 898511776--------579999866301346311---110022110036635579--------------999986----
Q gi|254780767|r 92 LLIVDNPDF--------THRVAKRVRKKMPNLPII---NYVCPSVWAWREGRARKM--------------CAYINQ---- 142 (383)
Q Consensus 92 vi~iD~pgF--------nl~lak~lkk~~~~ipvi---~yv~PqvWAWr~~R~k~~--------------~~~~d~---- 142 (383)
T Consensus 93 ~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSLEP----LRPWK~EQLGgGY~lSsW~EktA~~aAd~vIAV 168 (416)
T TIGR02149 93 AMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSLEP----LRPWKKEQLGGGYKLSSWAEKTAIEAADRVIAV 168 (416)
T ss_pred HHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCC----CCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEH
T ss_conf 8761100271553207888789999999669983997303788----871317565897420247888899850406531
Q ss_pred -------HCCCCCCCHHHHHCCCCCCEEECCCCCCCCCC-CCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHH
Q ss_conf -------40156774223200255314763882112210-0135588897618765565059985387430123051118
Q gi|254780767|r 143 -------VISILPFEKEVMQRLGGPPTTFVGHPLSSSPS-ILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFE 214 (383)
Q Consensus 143 -------~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~-~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l 214 (383)
T Consensus 169 S~amr~DiL~~YP~----lD~-~kv~Vv~NGId~~~y~~~~~~~~~~v~~~~Gid~~rP~~lFV-G-RIt-RQKGv~~L~ 240 (416)
T TIGR02149 169 SGAMREDILKVYPD----LDP-EKVHVVYNGIDTKEYKPAADDDGNKVLDRYGIDRSRPYVLFV-G-RIT-RQKGVPHLL 240 (416)
T ss_pred HHHCHHHHHCCCCC----CCC-CCEEEEECCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEE-E-EEE-CCCCHHHHH
T ss_conf 11033558315868----884-646888647645760688887411346632679988878985-2-020-316558999
Q ss_pred HHHHHHHHCCCCCEEEECC----CCCHHHHHHHHHHHCCCC-CEE-E----EECCCCHHHHHHHHHHHCCC-----HHHH
Q ss_conf 9998764027351262016----633688999999604888-505-5----20552035788763552331-----1566
Q gi|254780767|r 215 SAVASLVKRNPFFRFSLVT----VSSQENLVRCIVSKWDIS-PEI-I----IDKEQKKQVFMTCNAAMAAS-----GTVI 279 (383)
Q Consensus 215 ~~~~~l~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~-~~i-~----~~~~~~~~~l~~sd~ai~~S-----GTaT 279 (383)
T Consensus 241 ~A~~~~~~---dvqvVLCAgapDTPEv~~Ev~~~~a~l~~~R~gv~WI~~ml~~~~~~~L~~~A~vFvCPSvYEPLGIvN 317 (416)
T TIGR02149 241 KAVHLISK---DVQVVLCAGAPDTPEVAEEVRQAVAKLDREREGVIWIEKMLPKEELVELLSNAEVFVCPSVYEPLGIVN 317 (416)
T ss_pred HHHHHCCC---CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHH
T ss_conf 99962552---035987067678720689999999988761698386356588789999984694786484425420556
Q ss_pred HHHHHHCCCEEEECCCCCCEEEEE-----ECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHH-
Q ss_conf 888762753025405774100001-----02467610230244078426124205489899999999984498999999-
Q gi|254780767|r 280 LELALCGIPVVSIYKSEWIVNFFI-----FYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAM- 353 (383)
Q Consensus 280 LE~al~g~P~IV~Yk~~~lt~~i~-----~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~- 353 (383)
T Consensus 318 LEAMAC~tp-VVAS~~GGIpEVV~dg~TG~LV~~~~------lhdGtGtP~--d~d~f~~~LA~ai~~ll~dp~~A~k~G 388 (416)
T TIGR02149 318 LEAMACGTP-VVASAVGGIPEVVVDGETGFLVPIDD------LHDGTGTPD--DDDKFEADLAKAIDALLADPELAKKMG 388 (416)
T ss_pred HHHHHCCCC-EEECCCCCCCCEEECCCCCCCCCCCC------CCCCCCCCC--CCCHHHHHHHHHHHHHHCCHHHHHHHC
T ss_conf 878850786-34403689552683374431247014------557788888--740568999999999742957898834
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 999999999838999989999999998
Q gi|254780767|r 354 LHGFENLWDRMNTKKPAGHMAAEIVLQ 380 (383)
Q Consensus 354 ~~~~~~~~~~Lg~~~~a~~~AA~~I~~ 380 (383)
T Consensus 389 ~aGr~R~~~~FSW~~iA~kT~-~~Y~~ 414 (416)
T TIGR02149 389 EAGRKRAVEEFSWESIAKKTV-ELYRK 414 (416)
T ss_pred HHHHHHHHHCCCHHHHHHHHH-HHHHH
T ss_conf 434655421257578999999-99874