HHsearch alignment for GI: 254780767 and conserved domain: TIGR03568
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=99.45 E-value=9.3e-11 Score=90.96 Aligned_cols=308 Identities=17% Similarity=0.179 Sum_probs=169.9
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH-----------HHHCCCEEEECHHHC----CEEEHHHHH
Q ss_conf 4599997682147899999999997389983999-971789-----------994788065044453----110136746
Q gi|254780767|r 4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS-----------LQKEGLVSLFDFSEL----SVIGIMQVV 67 (383)
Q Consensus 4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~-----------m~~~G~~~~~~~~~l----~v~G~~evl 67 (383)
T Consensus 1 kKI~~v~GtRpe~iklapli~~l~~~--~~~~~~li~TGqH~~~~~g~t~~~i~~d~~~~~~~~~~~~~~~~~~~~~~-- 76 (365)
T TIGR03568 1 KKICVVTGTRADYGLLRPLLKALQDD--PDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKIEILLDSDSNAGMAK-- 76 (365)
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHC--CCCCEEEEEECCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH--
T ss_conf 94999985077299999999999728--99888999907778411070899999757987655765456898533999--
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 64599999999998610012888689851177657999986630134631111002--2110036635579999986401
Q gi|254780767|r 68 RHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCP--SVWAWREGRARKMCAYINQVIS 145 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~P--qvWAWr~~R~k~~~~~~d~~~~ 145 (383)
T Consensus 77 ----~~~~~~~~~~~~l~~~kPD~VlV~--GDt~stla~alaA~~~~Ipv~HveaGlrs~~~~d----E~~R~~i~~lS~ 146 (365)
T TIGR03568 77 ----SMGLTIIGFSDAFERLKPDLVVVL--GDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAID----ESIRHAITKLSH 146 (365)
T ss_pred ----HHHHHHHHHHHHHHHCCCCEEEEE--CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCC----HHHHHHHHHHHH
T ss_conf ----999999999999854399899994--8986077999999981981899967864589886----588889899877
Q ss_pred C-CCCCHHH---HHCCCCC---CEEECCCCCCCCCCCC--CCHHHHHHHCCCCCCCCEEEEEEC---CCCCCHHHHCCCH
Q ss_conf 5-6774223---2002553---1476388211221001--355888976187655650599853---8743012305111
Q gi|254780767|r 146 I-LPFEKEV---MQRLGGP---PTTFVGHPLSSSPSIL--EVYSQRNKQRNTPSQWKKILLLPG---SRAQEIYKILPFF 213 (383)
Q Consensus 146 i-fpFE~~~---f~k~~~~---~~~fVGHPl~d~~~~~--~~~~~~~~~~~~~~~~~~I~llPG---SR~~EI~~~lP~~ 213 (383)
T Consensus 147 ~hf~~t~~a~~nL~~-eG~~~~~I~~vGn~~iD~l~~~~~~~~~~~~~~~~~~~~~~~~LvT~Hp~~~~~~~~~~~l~~i 225 (365)
T TIGR03568 147 LHFVATEEYRQRVIQ-MGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKEL 225 (365)
T ss_pred HHHCCCHHHHHHHHH-CCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 773233578899986-2478670898277189998622213788999874121368769999535325665689999999
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHC-CCCCEEEEE----CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 89998764027351262016633688999999604-888505520----5520357887635523311566888762753
Q gi|254780767|r 214 ESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKW-DISPEIIID----KEQKKQVFMTCNAAMAASGTVILELALCGIP 288 (383)
Q Consensus 214 l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~i~~~----~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P 288 (383)
T Consensus 226 l~al~~---~~~~~~~i~Pn~d~~~~~i~~~i~~~~~~~~ni~~i~pl~y~~fl~ll~~a~~vitdSsggi~Ea~~l~~P 302 (365)
T TIGR03568 226 LKALDE---LNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGIIEAPSFGVP 302 (365)
T ss_pred HHHHHH---HCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCC
T ss_conf 999972---08881798269860278899999999707998899667888999999987019998588654670104986
Q ss_pred EEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHH
Q ss_conf 025405774100001024676102302440784261242054898999999999844989999
Q gi|254780767|r 289 VVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRR 351 (383)
Q Consensus 289 ~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~ 351 (383)
T Consensus 303 ~i~i~--~Rq~~r----~~~-----~nvi~----------v~~~~~~I~~ai~~~~~-~~~~~ 343 (365)
T TIGR03568 303 TINIG--TRQKGR----LRA-----DSVID----------VDPDKEEIVKAIEKLLD-PAFKK 343 (365)
T ss_pred EEEEC--CCCCCC----CCC-----CEEEE----------ECCCHHHHHHHHHHHHC-HHHHH
T ss_conf 78837--885555----247-----60898----------17999999999999748-78987