HHsearch alignment for GI: 254780767 and conserved domain: cd03785
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=9e-25 Score=183.42 Aligned_cols=333 Identities=16% Similarity=0.213 Sum_probs=219.8
Q ss_pred EEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECCHH-HHHCCCEEE-ECHHHCCEEE-----HHHHHHHHHHHHHH
Q ss_conf 5999976821478999-99999997389983999971789-994788065-0444531101-----36746645999999
Q gi|254780767|r 5 KIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGGPS-LQKEGLVSL-FDFSELSVIG-----IMQVVRHLPQFIFR 76 (383)
Q Consensus 5 ki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG~~-m~~~G~~~~-~~~~~l~v~G-----~~evl~~~~~~~~~ 76 (383)
T Consensus 1 ki~i~~GGTGGHi~Palala~~L~~~-g~--~V~~i~~~~g~e~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 77 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRER-GA--EVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKG 77 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHC-CC--EEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 98999478589999999999999978-79--8999987836864234413994899768887888739999999999999
Q ss_pred HHHHHHHCCCCCCCEEEEE-CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHCCCCCCCHHHH
Q ss_conf 9999861001288868985-11776579999866301346311110022110036635-579999986401567742232
Q gi|254780767|r 77 INQTVELIVSSKPDVLLIV-DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRA-RKMCAYINQVISILPFEKEVM 154 (383)
Q Consensus 77 ~~~~~~~i~~~~Pd~vi~i-D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~-k~~~~~~d~~~~ifpFE~~~f 154 (383)
T Consensus 78 ~~~~~~~l~~~kPd~vi~~GGY~s~P~~laA~~~----~iP~~ih-EqN~v---~G~anr~l~~~a~~i~~~f~~~~~~~ 149 (350)
T cd03785 78 VLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLL----GIPLVIH-EQNAV---PGLANRLLARFADRVALSFPETAKYF 149 (350)
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC----CCCCEEE-CCCCC---CCHHHHHHCCCCCEEEECCHHHHHCC
T ss_conf 9999999996499999988981038999999972----9985565-67722---57132332100398998575654124
Q ss_pred HCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 00255314763882112210013558889761876556505998538743012305111899987640273512620166
Q gi|254780767|r 155 QRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV 234 (383)
Q Consensus 155 ~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~ 234 (383)
T Consensus 150 ~---~~k~~~vG~PvR~~~~~~~---~~~~~~~~~~~~~~iLv~GGSqGa~~ln--~~v~~~~~~l~~--~~~~ii~~~G 219 (350)
T cd03785 150 P---KDKAVVTGNPVREEILALD---RERARLGLRPGKPTLLVFGGSQGARAIN--EAVPEALAELLR--KRLQVIHQTG 219 (350)
T ss_pred C---CCCEEEECCCCCHHHHCCC---HHHHHCCCCCCCEEEEEECCCCHHHHHH--HHHHHHHHHHHH--CCCEEEEECC
T ss_conf 6---6777996885226664143---4467527898973999984872047899--999999998764--4968999838
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHH-HHHHHCCCEEEE-CCCC--CCEEEEEE-CCCCC
Q ss_conf 3368899999960488850552055203578876355233115668-887627530254-0577--41000010-24676
Q gi|254780767|r 235 SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVIL-ELALCGIPVVSI-YKSE--WIVNFFIF-YIKTW 309 (383)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~g~P~IV~-Yk~~--~lt~~i~~-lik~~ 309 (383)
T Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~l~~aDlvIsraGa~Ti~E~~~~g~P~IlIP~p~a~d~hQ~~NA~~l~~~g 299 (350)
T cd03785 220 KGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAG 299 (350)
T ss_pred CCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 40089999999866998899251889999986198899779842599999819986998458777665999999999889
Q ss_pred CEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 10230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r 310 TCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA 374 (383)
Q Consensus 310 ~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A 374 (383)
T Consensus 300 ~a---------~~i~---e~~~~~~~L~~~i~~ll~d~~~l~~m~~~~~~----~~~~~a~~~i~ 348 (350)
T cd03785 300 AA---------VLIP---QEELTPERLAAALLELLSDPERLKAMAEAARS----LARPDAAERIA 348 (350)
T ss_pred CE---------EEEE---CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHC----CCCCCHHHHHH
T ss_conf 99---------9950---02499999999999998799999999999874----58979999984