HHsearch alignment for GI: 254780767 and conserved domain: cd03785

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94  E-value=9e-25  Score=183.42  Aligned_cols=333  Identities=16%  Similarity=0.213  Sum_probs=219.8

Q ss_pred             EEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECCHH-HHHCCCEEE-ECHHHCCEEE-----HHHHHHHHHHHHHH
Q ss_conf             5999976821478999-99999997389983999971789-994788065-0444531101-----36746645999999
Q gi|254780767|r    5 KIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGGPS-LQKEGLVSL-FDFSELSVIG-----IMQVVRHLPQFIFR   76 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG~~-m~~~G~~~~-~~~~~l~v~G-----~~evl~~~~~~~~~   76 (383)
T Consensus         1 ki~i~~GGTGGHi~Palala~~L~~~-g~--~V~~i~~~~g~e~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   77 (350)
T cd03785           1 RILIAGGGTGGHIFPALALAEELRER-GA--EVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKG   77 (350)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHC-CC--EEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             98999478589999999999999978-79--8999987836864234413994899768887888739999999999999


Q ss_pred             HHHHHHHCCCCCCCEEEEE-CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHCCCCCCCHHHH
Q ss_conf             9999861001288868985-11776579999866301346311110022110036635-579999986401567742232
Q gi|254780767|r   77 INQTVELIVSSKPDVLLIV-DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRA-RKMCAYINQVISILPFEKEVM  154 (383)
Q Consensus        77 ~~~~~~~i~~~~Pd~vi~i-D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~-k~~~~~~d~~~~ifpFE~~~f  154 (383)
T Consensus        78 ~~~~~~~l~~~kPd~vi~~GGY~s~P~~laA~~~----~iP~~ih-EqN~v---~G~anr~l~~~a~~i~~~f~~~~~~~  149 (350)
T cd03785          78 VLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLL----GIPLVIH-EQNAV---PGLANRLLARFADRVALSFPETAKYF  149 (350)
T ss_pred             HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC----CCCCEEE-CCCCC---CCHHHHHHCCCCCEEEECCHHHHHCC
T ss_conf             9999999996499999988981038999999972----9985565-67722---57132332100398998575654124


Q ss_pred             HCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             00255314763882112210013558889761876556505998538743012305111899987640273512620166
Q gi|254780767|r  155 QRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV  234 (383)
Q Consensus       155 ~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~  234 (383)
T Consensus       150 ~---~~k~~~vG~PvR~~~~~~~---~~~~~~~~~~~~~~iLv~GGSqGa~~ln--~~v~~~~~~l~~--~~~~ii~~~G  219 (350)
T cd03785         150 P---KDKAVVTGNPVREEILALD---RERARLGLRPGKPTLLVFGGSQGARAIN--EAVPEALAELLR--KRLQVIHQTG  219 (350)
T ss_pred             C---CCCEEEECCCCCHHHHCCC---HHHHHCCCCCCCEEEEEECCCCHHHHHH--HHHHHHHHHHHH--CCCEEEEECC
T ss_conf             6---6777996885226664143---4467527898973999984872047899--999999998764--4968999838


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHH-HHHHHCCCEEEE-CCCC--CCEEEEEE-CCCCC
Q ss_conf             3368899999960488850552055203578876355233115668-887627530254-0577--41000010-24676
Q gi|254780767|r  235 SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVIL-ELALCGIPVVSI-YKSE--WIVNFFIF-YIKTW  309 (383)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~g~P~IV~-Yk~~--~lt~~i~~-lik~~  309 (383)
T Consensus       220 ~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~l~~aDlvIsraGa~Ti~E~~~~g~P~IlIP~p~a~d~hQ~~NA~~l~~~g  299 (350)
T cd03785         220 KGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAG  299 (350)
T ss_pred             CCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf             40089999999866998899251889999986198899779842599999819986998458777665999999999889


Q ss_pred             CEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             10230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r  310 TCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA  374 (383)
Q Consensus       310 ~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A  374 (383)
T Consensus       300 ~a---------~~i~---e~~~~~~~L~~~i~~ll~d~~~l~~m~~~~~~----~~~~~a~~~i~  348 (350)
T cd03785         300 AA---------VLIP---QEELTPERLAAALLELLSDPERLKAMAEAARS----LARPDAAERIA  348 (350)
T ss_pred             CE---------EEEE---CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHC----CCCCCHHHHHH
T ss_conf             99---------9950---02499999999999998799999999999874----58979999984