HHsearch alignment for GI: 254780767 and conserved domain: cd03819
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.58 E-value=6.2e-12 Score=98.70 Aligned_cols=305 Identities=16% Similarity=0.178 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCHH---HHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 7899999999997389983999971789---9947880650444531101367466459999999999861001288868
Q gi|254780767|r 16 DLLAGDLIKSLKEMVSYPINLVGVGGPS---LQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVL 92 (383)
Q Consensus 16 D~~~a~li~~Lk~~~~~~~~~~giGG~~---m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~v 92 (383)
T Consensus 13 E~~~~~La~~L~~~-Gh~V~vi~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~l~~~l~~~~~Div 82 (355)
T cd03819 13 ERGTLELARALVER-GHRSLVASAGGRLVAELEAEGSRHI---------KLPFISKNPLRILLNVARLRRLIREEKVDIV 82 (355)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHHHCCCEEE---------EECCCCCCCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999999987-9989999689987155663496699---------9178778828999999999999999699899
Q ss_pred EEEC-HHHHHHHHHHHHHHHCCCCCCEEEEC---CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCC---CEEEC
Q ss_conf 9851-17765799998663013463111100---22110036635579999986401567742232002553---14763
Q gi|254780767|r 93 LIVD-NPDFTHRVAKRVRKKMPNLPIINYVC---PSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGP---PTTFV 165 (383)
Q Consensus 93 i~iD-~pgFnl~lak~lkk~~~~ipvi~yv~---PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~---~~~fV 165 (383)
T Consensus 83 h~h~~~~~~~~~~a~~~----~~~~~i~t~H~~~~~~~~~-----~~~~~~~~~~i~~S~~~~~~~~~~~~~~~~ki~vI 153 (355)
T cd03819 83 HARSRAPAWSAYLAARR----TRPPFVTTVHGFYSVNFRY-----NAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVI 153 (355)
T ss_pred EECCCCHHHHHHHHHHH----CCCCEEEEECCCCCHHHHH-----HHHHHHCCEEEEECHHHHHHHHHHHCCCHHHEEEE
T ss_conf 97786449999999985----3997899967877406799-----99997279899945899999999739987899997
Q ss_pred CCCCCC-CCCC----CCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCC----
Q ss_conf 882112-2100----1355888976187655650599853874301230511189998764027351262016633----
Q gi|254780767|r 166 GHPLSS-SPSI----LEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSS---- 236 (383)
Q Consensus 166 GHPl~d-~~~~----~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~---- 236 (383)
T Consensus 154 ~ngid~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~i~~vG-Rl~~-~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~ 230 (355)
T cd03819 154 PRGVDLDRFDPGAVPPERILALAREWPLPKGKP-VILLPG-RLTR-WKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRF 230 (355)
T ss_pred CCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCE-EEEEEC-CCCC-CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH
T ss_conf 887565423877787788999998628999987-999961-6654-4576999999999986489979999707864168
Q ss_pred HHHHHHHHHHHCCCCCEEEEE--CCCCHHHHHHHHHHHCCC------HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCC
Q ss_conf 688999999604888505520--552035788763552331------156688876275302540577410000102467
Q gi|254780767|r 237 QENLVRCIVSKWDISPEIIID--KEQKKQVFMTCNAAMAAS------GTVILELALCGIPVVSIYKSEWIVNFFIFYIKT 308 (383)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~--~~~~~~~l~~sd~ai~~S------GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~ 308 (383)
T Consensus 231 ~~~~~~~~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~~Egf~~vllEAma~G~P-vV~s~~gg~---------- 299 (355)
T cd03819 231 YYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRP-VIASDHGGA---------- 299 (355)
T ss_pred HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC-EEEECCCCC----------
T ss_conf 999999999981997628865762146899874032558877710000789999986998-999089994----------
Q ss_pred CCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Q ss_conf 6102302440784261242054898999999999844-989999999999999
Q gi|254780767|r 309 WTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQ-DTLQRRAMLHGFENL 360 (383)
Q Consensus 309 ~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~-d~~~r~~~~~~~~~~ 360 (383)
T Consensus 300 -----~eii~~~~-~G-~l~~~~d~~~l~~~i~~~l~~~~~~r~~~~~~ar~~ 345 (355)
T cd03819 300 -----RETVRPGE-TG-LLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMC 345 (355)
T ss_pred -----HHHCCCCC-CE-EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf -----76615899-78-998899999999999999869999999999999999