HHsearch alignment for GI: 254780767 and conserved domain: cd04949
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.79 E-value=9.9e-08 Score=70.98 Aligned_cols=148 Identities=20% Similarity=0.246 Sum_probs=113.8
Q ss_pred EECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC--CCCHHHHHHHHHHHCCC
Q ss_conf 8538743012305111899987640273512620166336889999996048885055205--52035788763552331
Q gi|254780767|r 198 LPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDK--EQKKQVFMTCNAAMAAS 275 (383)
Q Consensus 198 lPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~l~~sd~ai~~S 275 (383)
T Consensus 208 i~vgRL~~e-K~~d~LI~A~~~v~~~~P~~~L~I~G~G~~~~~L~~~i~~l~l~~~V~f~G~~~~~~~~y~~a~~~v~~S 286 (372)
T cd04949 208 ITVARLAPE-KQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTS 286 (372)
T ss_pred EEEECCCCC-CCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCEEEECC
T ss_conf 999677740-2859999999999987899299999734778999999998299987998899889899997579999802
Q ss_pred -----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCC---CCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf -----1566888762753025405774100001024676102302440784---26124205489899999999984498
Q gi|254780767|r 276 -----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYP---LVPEYFNSMIRSEALVRWIERLSQDT 347 (383)
Q Consensus 276 -----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~---ivPEliQ~~~~~~~i~~~~~~ll~d~ 347 (383)
T Consensus 287 ~~EGfgl~llEAma~GlP-vIa~d~~y--------------G~~eiI~~g~nG~Lv~-----~~d~~~la~~i~~ll~~~ 346 (372)
T cd04949 287 QSEGFGLSLMEALSHGLP-VISYDVNY--------------GPSEIIEDGENGYLVP-----KGDIEALAEAIIELLNDP 346 (372)
T ss_pred CCCCCCCHHHHHHHCCCC-EEEECCCC--------------CCHHHHCCCCCEEEEC-----CCCHHHHHHHHHHHHCCH
T ss_conf 003676589999985999-99805999--------------9688845898479968-----999999999999998699
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999998389
Q gi|254780767|r 348 LQRRAMLHGFENLWDRMNT 366 (383)
Q Consensus 348 ~~r~~~~~~~~~~~~~Lg~ 366 (383)
T Consensus 347 ~~~~~~s~~a~~~a~~fs~ 365 (372)
T cd04949 347 KLLQKFSEAAYENAERYSE 365 (372)
T ss_pred HHHHHHHHHHHHHHHHCCH
T ss_conf 9999999999999995598