HHsearch alignment for GI: 254780767 and conserved domain: pfam00201

Probab=97.71  E-value=0.0052  Score=39.83  Aligned_cols=105  Identities=12%  Similarity=0.009  Sum_probs=62.9

Q ss_pred             CCCHHHHHHH--HHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHH
Q ss_conf             5203578876--355233115668-8876275302540577410000102467610230244078426124205489899
Q gi|254780767|r  259 EQKKQVFMTC--NAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEA  335 (383)
Q Consensus       259 ~~~~~~l~~s--d~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~  335 (383)
T Consensus       331 ~PQ~dILaHp~vklFITHgG~~S~~Eai~~GVP~v~iP~f~D-Q~~Na~~~~~~G~g~~-----------l~~~~lt~~~  398 (501)
T pfam00201       331 LPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGD-QMDNAKHMEAKGAAVT-----------LNVLTMTSED  398 (501)
T ss_pred             CCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHCCCEEE-----------EECCCCCHHH
T ss_conf             882667619871189965873069999985989897156344-6999999997797899-----------6321199999


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             9999999844989999999999999998389999899999999
Q gi|254780767|r  336 LVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIV  378 (383)
Q Consensus       336 i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I  378 (383)
T Consensus       399 l~~ai~~vl~n~~Y~~na~~~s~~~~d~---P~~p~~~av~w~  438 (501)
T pfam00201       399 LLNALKTVINDPSYKENIMRLSSIHHDQ---PVKPLDRAVFWI  438 (501)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHCC---CCCHHHHHHHHH
T ss_conf             9999999970988999999999998659---999899999999