HHsearch alignment for GI: 254780767 and conserved domain: pfam00534
>pfam00534 Glycos_transf_1 Glycosyl transferases group 1. Mutations in this domain of subunit A of phosphatidylinositol N-acetylglucosaminyltransferase lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.
Probab=98.94 E-value=6.3e-08 Score=72.25 Aligned_cols=160 Identities=21% Similarity=0.247 Sum_probs=109.4
Q ss_pred CHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 5588897618765565059985387430123051118999876402-735126201663368899999960488850552
Q gi|254780767|r 178 VYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKR-NPFFRFSLVTVSSQENLVRCIVSKWDISPEIII 256 (383)
Q Consensus 178 ~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (383)
T Consensus 1 ~~~~~r~~~~i~~~~~-vi~~~G~~~--~~Kg~~~~i~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~ 77 (172)
T pfam00534 1 DREEERKKLGIPEDKP-IILFVGRLV--PEKGLDLLLEAFALLKEQLHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIF 77 (172)
T ss_pred CHHHHHHHCCCCCCCE-EEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEE
T ss_conf 9789999879999995-999965485--5449899999899888740898599998378326789999998399986899
Q ss_pred E----CCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHH
Q ss_conf 0----552035788763552331-----1566888762753025405774100001024676102302440784261242
Q gi|254780767|r 257 D----KEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYF 327 (383)
Q Consensus 257 ~----~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEli 327 (383)
T Consensus 78 ~~~~~~~~~~~~l~~sdi~i~ps~~E~~~~~~~Eam~~G~pvI~s-~~~~~~e---------------ii~~~~~-G~~~ 140 (172)
T pfam00534 78 VGFVPREDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIAS-DVGGPAE---------------IVKDGET-GLLV 140 (172)
T ss_pred ECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCEEEEE-CCCCHHH---------------HHHCCCE-EEEE
T ss_conf 578898999999997241047736651571189999679719995-6997299---------------9718983-9997
Q ss_pred CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 0548989999999998449899999999999
Q gi|254780767|r 328 NSMIRSEALVRWIERLSQDTLQRRAMLHGFE 358 (383)
Q Consensus 328 Q~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~ 358 (383)
T Consensus 141 -~~~~~~~l~~~i~~li~n~~~~~~m~~n~~ 170 (172)
T pfam00534 141 -DPGDAEALAEAIEKLLKDEELRERLGENAR 170 (172)
T ss_pred -CCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf -899999999999999879999999999844