HHsearch results for GI: 254780767 and protein with PDBid: 1vgv_A
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.60 E-value=5.5e-13 Score=104.22 Aligned_cols=337 Identities=14% Similarity=0.118 Sum_probs=196.1
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH--HHHC-----CCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf 4599997682147899999999997389983999-971789--9947-----8806504445311013674664599999
Q gi|254780767|r 4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS--LQKE-----GLVSLFDFSELSVIGIMQVVRHLPQFIF 75 (383)
Q Consensus 4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~--m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~~~~ 75 (383)
|||++++|--+-=..-+.|+++|++. +++++. -++|.+ |... |...-+ ++++..-.+-+. ..+.+
T Consensus 1 mKi~~v~GtR~e~~kl~pli~~l~~~--~~~~~~li~tG~H~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~--~~~~~ 73 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKD--PFFEAKVCVTAQHREMLDQVLKLFSIVPDY---DLNIMQPGQGLT--EITCR 73 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHS--TTCEEEEEECCSSGGGGHHHHHHHTCCCSE---ECCCCSTTSCHH--HHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHHHHCCCCCCC---CCCCCCCCCCHH--HHHHH
T ss_conf 93999997347199999999999738--998889999389889999999862978774---524688999999--99999
Q ss_pred HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC----CCC-CCCCCCCHHHHHHHHHHHCCC-CCC
Q ss_conf 99999861001288868985117765799998663013463111100----221-100366355799999864015-677
Q gi|254780767|r 76 RINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC----PSV-WAWREGRARKMCAYINQVISI-LPF 149 (383)
Q Consensus 76 ~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~----Pqv-WAWr~~R~k~~~~~~d~~~~i-fpF 149 (383)
....+-+.+.+.+||+|+...-..-.+..|-.+.. .+||++|+-+ -.+ |.|-+.. .+..+|++.-+ |.-
T Consensus 74 ~i~~~~~~l~~~kpD~v~v~GDr~e~la~a~aa~~--~~Ipi~HiegG~~s~~~~~~~~de~---~R~~i~klS~lhf~~ 148 (384)
T 1vgv_A 74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFY--QRIPVGHVEAGLRTGDLYSPWPEEA---NRTLTGHLAMYHFSP 148 (384)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT--TTCCEEEESCCCCCSCTTSSTTHHH---HHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCHHHH---HHCCCCCCCEEEEEC
T ss_conf 99999999985599989996898437669999997--5997899841445678777880676---530113212388743
Q ss_pred CHHHHH---CC--CCCCEEECCCCCCCCCCCCC----CHHHHH----HHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHH
Q ss_conf 422320---02--55314763882112210013----558889----761876556505998538743012305111899
Q gi|254780767|r 150 EKEVMQ---RL--GGPPTTFVGHPLSSSPSILE----VYSQRN----KQRNTPSQWKKILLLPGSRAQEIYKILPFFESA 216 (383)
Q Consensus 150 E~~~f~---k~--~~~~~~fVGHPl~d~~~~~~----~~~~~~----~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~ 216 (383)
-+++.+ +. ..-++..||+|..|.+.... ...... .............++...|.......+..+.++
T Consensus 149 ~~~~~~rL~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~t~h~~~~~~~~~~~i~~~ 228 (384)
T 1vgv_A 149 TETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHA 228 (384)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf 58999999871878543400166524367665443015267788762023221367876997346532220329999999
Q ss_pred HHHHHHCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEE
Q ss_conf 98764027351262016633688--99999960488850552----0552035788763552331156688876275302
Q gi|254780767|r 217 VASLVKRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVV 290 (383)
Q Consensus 217 ~~~l~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~I 290 (383)
+..+.+.+.++.++.|..+.... ........ ..++.. ...+...++..|++.++-||+.-.|++.+|+|+|
T Consensus 229 l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~---~~ni~~~~~l~~~~~l~ll~~a~~vIgnSssgi~EA~~lg~P~I 305 (384)
T 1vgv_A 229 LADIATTHQDIQIVYPVHLNPNVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVL 305 (384)
T ss_dssp HHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEEEESSSTGGGTGGGGTCCEE
T ss_pred HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC---CCCCEECCCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEE
T ss_conf 999876466706985348985301456777514---44431037855899999985156999468418888987299789
Q ss_pred EE-CCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 54-05774100001024676102302440784261242054898999999999844989999999999999998389999
Q gi|254780767|r 291 SI-YKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKP 369 (383)
Q Consensus 291 V~-Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~ 369 (383)
++ ..+-+-. .+....+-+ -..+++.|.+++.++++|+..++.+. +...-.| .|.
T Consensus 306 nir~~ter~~-----~~~~~~~i~---------------v~~~~~~I~~ai~~~l~~~~~~~~~~----~~~npYG-dG~ 360 (384)
T 1vgv_A 306 VMRDTTERPE-----AVTAGTVRL---------------VGTDKQRIVEEVTRLLKDENEYQAMS----RAHNPYG-DGQ 360 (384)
T ss_dssp EESSCCSCHH-----HHHHTSEEE---------------ECSSHHHHHHHHHHHHHCHHHHHHHH----SSCCTTC-CSC
T ss_pred ECCCCCCCHH-----HHHCCEEEE---------------CCCCHHHHHHHHHHHHHCHHHHHHCC----CCCCCCC-CCH
T ss_conf 7778766711-----443680598---------------68999999999999970978775414----4789898-985
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999998
Q gi|254780767|r 370 AGHMAAEIVLQ 380 (383)
Q Consensus 370 a~~~AA~~I~~ 380 (383)
++++..+++.+
T Consensus 361 as~rIv~~Lk~ 371 (384)
T 1vgv_A 361 ACSRILEALKN 371 (384)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999983