Query         gi|254780767|ref|YP_003065180.1| lipid-A-disaccharide synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 383
No_of_seqs    189 out of 1971
Neff          6.9 
Searched_HMMs 23785
Date          Mon May 30 13:25:56 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780767.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1f0k_A MURG, UDP-N-acetylgluco  99.8 8.1E-18 3.4E-22  136.1  22.7  339    1-382     2-354 (364)
  2 1v4v_A UDP-N-acetylglucosamine  99.7 8.6E-16 3.6E-20  122.7  19.1  340    3-383     4-366 (376)
  3 3ia7_A CALG4; glycosysltransfe  99.7 4.1E-14 1.7E-18  111.6  25.1  344    1-383     2-398 (402)
  4 2jjm_A Glycosyl transferase, g  99.7 1.3E-13 5.6E-18  108.3  22.0  337    3-366    15-371 (394)
  5 3iaa_A CALG2; glycosyltransfer  99.6 1.6E-12 6.9E-17  101.1  25.9  340    3-382    19-412 (416)
  6 1vgv_A UDP-N-acetylglucosamine  99.6 5.5E-13 2.3E-17  104.2  20.3  337    4-380     1-371 (384)
  7 2gek_A Phosphatidylinositol ma  99.6 3.7E-14 1.5E-18  112.0  12.6  328    2-365    19-368 (406)
  8 2iya_A OLEI, oleandomycin glyc  99.6 1.1E-11 4.6E-16   95.6  25.0  343    1-382    10-420 (424)
  9 3beo_A UDP-N-acetylglucosamine  99.6 5.4E-13 2.3E-17  104.3  16.7  342    1-382     6-373 (375)
 10 3ot5_A UDP-N-acetylglucosamine  99.5 1.1E-12 4.5E-17  102.3  18.1  342    1-382    25-392 (403)
 11 3c48_A Predicted glycosyltrans  99.5 2.1E-11 8.8E-16   93.8  20.9  337    2-365    19-410 (438)
 12 2x6q_A Trehalose-synthase TRET  99.5 4.4E-11 1.8E-15   91.7  21.2  339    1-383    38-416 (416)
 13 2iyf_A OLED, oleandomycin glyc  99.4 6.9E-10 2.9E-14   83.8  25.1  341    2-382     6-398 (430)
 14 3okp_A GDP-mannose-dependent a  99.4 2.7E-11 1.1E-15   93.1  16.3  264   76-365    74-364 (394)
 15 1rrv_A Glycosyltransferase GTF  99.4 5.9E-10 2.5E-14   84.2  21.2  340    4-383     1-400 (416)
 16 2iw1_A Lipopolysaccharide core  99.3 1.2E-10   5E-15   88.8  16.8  343    4-382     1-372 (374)
 17 2qzs_A Glycogen synthase; glyc  99.3 2.8E-09 1.2E-13   79.7  23.1  336    4-352     1-447 (485)
 18 3fro_A GLGA glycogen synthase;  99.3   1E-09 4.3E-14   82.6  19.4  335    2-364     1-414 (439)
 19 1psw_A ADP-heptose LPS heptosy  99.3 4.7E-11   2E-15   91.5  11.3  323    4-348     1-347 (348)
 20 2p6p_A Glycosyl transferase; G  99.3 3.4E-10 1.4E-14   85.8  15.2  335    4-380     1-376 (384)
 21 1rzu_A Glycogen synthase 1; gl  99.2 9.5E-09   4E-13   76.2  20.7  164  182-356   280-453 (485)
 22 3h4t_A Glycosyltransferase GTF  99.2 1.4E-08 5.7E-13   75.2  21.4  333    4-381     1-380 (404)
 23 3dzc_A UDP-N-acetylglucosamine  99.2   5E-08 2.1E-12   71.5  23.8  340    2-379    23-395 (396)
 24 1iir_A Glycosyltransferase GTF  99.2 2.6E-08 1.1E-12   73.4  21.4  337    4-381     1-397 (415)
 25 3oy2_A Glycosyltransferase B73  99.2 1.9E-10 8.1E-15   87.4   9.8  337    4-360     1-369 (413)
 26 3hbm_A UDP-sugar hydrolase; PS  99.1 3.9E-09 1.6E-13   78.8  13.8  243    4-293     1-251 (282)
 27 3hbf_A Flavonoid 3-O-glucosylt  98.8 7.2E-06   3E-10   57.2  22.9  354    4-381    14-451 (454)
 28 2r60_A Glycosyl transferase, g  98.7 9.1E-06 3.8E-10   56.6  19.4  159  184-365   253-444 (499)
 29 2bfw_A GLGA glycogen synthase;  98.7 3.1E-07 1.3E-11   66.3  11.3  181  158-361     4-196 (200)
 30 2pq6_A UDP-glucuronosyl/UDP-gl  98.6 6.7E-06 2.8E-10   57.4  17.6  180  185-382   288-478 (482)
 31 2gt1_A Lipopolysaccharide hept  98.5 1.2E-06 5.1E-11   62.3  11.1  301    4-347     1-323 (326)
 32 2c1x_A UDP-glucose flavonoid 3  98.5 9.5E-05   4E-09   49.9  21.7  177  185-379   264-448 (456)
 33 2acv_A Triterpene UDP-glucosyl  98.4 0.00013 5.5E-09   48.9  21.8  355    4-383    10-463 (463)
 34 2iuy_A Avigt4, glycosyltransfe  98.2 1.4E-05 5.8E-10   55.4  10.7  243    1-300     1-278 (342)
 35 2vsy_A XCC0866; transferase, g  98.1  0.0003 1.3E-08   46.6  15.8  162  183-363   368-539 (568)
 36 2x0d_A WSAF; GT4 family, trans  98.1 1.2E-05 5.1E-10   55.8   7.4  306    3-353    46-386 (413)
 37 2hy7_A Glucuronosyltransferase  98.0 4.1E-05 1.7E-09   52.3   9.5  215   87-352   123-358 (406)
 38 1uqt_A Alpha, alpha-trehalose-  97.9  0.0015 6.4E-08   41.9  19.6  145  193-359   255-433 (482)
 39 3l7i_A Teichoic acid biosynthe  97.5 0.00055 2.3E-08   44.8   8.4  222  140-382   479-718 (729)
 40 2f9f_A First mannosyl transfer  97.1  0.0013 5.3E-08   42.4   6.7  129  195-349    25-165 (177)
 41 2o6l_A UDP-glucuronosyltransfe  96.7   0.013 5.5E-07   35.7   9.3  140  190-353    19-161 (170)
 42 2vch_A Hydroquinone glucosyltr  96.7    0.01 4.2E-07   36.5   8.5  110  255-374   343-459 (480)
 43 3nb0_A Glycogen [starch] synth  95.5   0.037 1.6E-06   32.8   6.6  100  260-365   511-618 (725)
 44 2jzc_A UDP-N-acetylglucosamine  92.6   0.019 8.1E-07   34.6   0.2   36  260-295   124-161 (224)
 45 3m2t_A Probable dehydrogenase;  91.7   0.091 3.8E-06   30.2   2.7   93    1-118     3-96  (359)
 46 1zh8_A Oxidoreductase; TM0312,  91.5     0.1 4.3E-06   29.8   2.9   94    1-118    16-110 (340)
 47 3e18_A Oxidoreductase; dehydro  91.1    0.17 7.1E-06   28.4   3.7   91    1-118     3-93  (359)
 48 1f06_A MESO-diaminopimelate D-  90.6    0.69 2.9E-05   24.4   6.4   87    1-119     1-87  (320)
 49 2b4a_A BH3024; 10175646, struc  90.0    0.87 3.6E-05   23.7   6.5   80    1-121    13-95  (138)
 50 2ixd_A LMBE-related protein; h  88.8     0.3 1.2E-05   26.8   3.3   88    1-99      1-108 (242)
 51 2hun_A 336AA long hypothetical  88.7    0.52 2.2E-05   25.2   4.6   36    1-40      1-36  (336)
 52 2rng_A BIG defensin; alpha-hel  88.7   0.048   2E-06   32.0  -0.7   16  114-129     3-21  (79)
 53 3lp8_A Phosphoribosylamine-gly  88.6     1.2 5.1E-05   22.8   6.7   91    1-118    19-111 (442)
 54 1ehi_A LMDDL2, D-alanine:D-lac  87.1     1.4 5.9E-05   22.3   6.0   40    1-40      1-45  (377)
 55 1iow_A DD-ligase, DDLB, D-ALA\  87.0     1.5 6.3E-05   22.2   6.4   77    1-118     1-84  (306)
 56 3e9m_A Oxidoreductase, GFO/IDH  87.0     0.4 1.7E-05   25.9   3.1   93    1-118     3-95  (330)
 57 3mz0_A Inositol 2-dehydrogenas  86.8    0.28 1.2E-05   27.0   2.2   94    1-118     1-94  (344)
 58 3b2n_A Uncharacterized protein  86.7    0.32 1.4E-05   26.5   2.5   81    1-120     1-83  (133)
 59 2i87_A D-alanine-D-alanine lig  86.4    0.19 8.2E-06   28.0   1.3  137    1-162     1-144 (364)
 60 2p2s_A Putative oxidoreductase  86.2     0.3 1.3E-05   26.7   2.2   93    1-118     2-94  (336)
 61 3e5n_A D-alanine-D-alanine lig  85.2     1.8 7.7E-05   21.6   6.5   39    1-40     20-63  (386)
 62 1qkk_A DCTD, C4-dicarboxylate   84.3    0.74 3.1E-05   24.2   3.4   40   81-120    40-81  (155)
 63 3ec7_A Putative dehydrogenase;  84.3    0.48   2E-05   25.4   2.5   94    3-119    23-116 (357)
 64 1tmy_A CHEY protein, TMY; chem  84.3    0.97 4.1E-05   23.4   4.0   38   83-120    42-81  (120)
 65 1a2o_A CHEB methylesterase; ba  84.2       2 8.6E-05   21.3   7.8   51  193-248   156-206 (349)
 66 1nvm_B Acetaldehyde dehydrogen  83.9     1.6 6.6E-05   22.0   4.9  101    1-120     1-103 (312)
 67 3eod_A Protein HNR; response r  83.8       1 4.4E-05   23.2   4.0   40   82-121    45-86  (130)
 68 3ezy_A Dehydrogenase; structur  83.8    0.64 2.7E-05   24.6   2.9   91    1-117     1-91  (344)
 69 2o4u_X Dimeric dihydrodiol deh  83.8    0.64 2.7E-05   24.6   2.9   94    1-118     1-94  (334)
 70 2hi1_A 4-hydroxythreonine-4-ph  83.6     2.2 9.1E-05   21.1   7.0  107    1-109     4-151 (330)
 71 3cu5_A Two component transcrip  83.4    0.79 3.3E-05   24.0   3.2   39   82-120    43-83  (141)
 72 1jkx_A GART;, phosphoribosylgl  83.1     1.3 5.5E-05   22.5   4.3   98    4-108     1-100 (212)
 73 2f48_A Diphosphate--fructose-6  83.0     2.3 9.6E-05   20.9   9.1  115    2-119    71-200 (555)
 74 1yio_A Response regulatory pro  82.8    0.84 3.6E-05   23.8   3.2   41   80-120    40-82  (208)
 75 3cz5_A Two-component response   82.3    0.97 4.1E-05   23.4   3.4   39   82-120    45-85  (153)
 76 2yrx_A Phosphoribosylglycinami  82.3     2.4  0.0001   20.8   6.9   89    2-118    20-111 (451)
 77 2gdz_A NAD+-dependent 15-hydro  82.2     2.4  0.0001   20.8   5.5   89    1-94      1-92  (267)
 78 1e4e_A Vancomycin/teicoplanin   81.8    0.81 3.4E-05   23.9   2.8  134    1-162     1-147 (343)
 79 2xdq_A Light-independent proto  81.7     2.5 0.00011   20.6   9.7  164   72-253    84-295 (460)
 80 3hdg_A Uncharacterized protein  81.5    0.75 3.1E-05   24.1   2.5   36   85-120    48-85  (137)
 81 3f6c_A Positive transcription   80.7    0.65 2.7E-05   24.5   2.0   37   84-120    42-80  (134)
 82 3crn_A Response regulator rece  80.5     1.2 4.9E-05   22.9   3.2   36   85-120    44-81  (132)
 83 3nav_A Tryptophan synthase alp  79.8     2.1 8.9E-05   21.2   4.4  124    6-141    24-174 (271)
 84 2pl1_A Transcriptional regulat  79.4     1.3 5.7E-05   22.5   3.3   38   85-122    41-80  (121)
 85 3cea_A MYO-inositol 2-dehydrog  79.3       3 0.00013   20.1  10.1   95    1-119     6-100 (346)
 86 2qv0_A Protein MRKE; structura  79.0     1.2   5E-05   22.8   2.9   38   83-120    50-89  (143)
 87 3a10_A Response regulator; pho  78.8     1.4 5.9E-05   22.4   3.2   39   83-121    40-80  (116)
 88 1srr_A SPO0F, sporulation resp  78.6     1.2 4.9E-05   22.8   2.8   37   85-121    44-82  (124)
 89 1dbw_A Transcriptional regulat  78.6       2 8.2E-05   21.4   3.9   80    1-121     1-82  (126)
 90 3bio_A Oxidoreductase, GFO/IDH  77.7     3.4 0.00014   19.8   8.8   87    2-119     8-94  (304)
 91 2hig_A 6-phospho-1-fructokinas  77.0    0.71   3E-05   24.3   1.3  116    2-120    96-224 (487)
 92 3eq2_A Probable two-component   76.8     1.5 6.4E-05   22.1   2.9   33   86-118    47-81  (394)
 93 1tlt_A Putative oxidoreductase  76.7     3.6 0.00015   19.6   5.3   90    1-118     3-93  (319)
 94 3i12_A D-alanine-D-alanine lig  76.0     1.6 6.5E-05   22.0   2.8   39    1-40      1-44  (364)
 95 3evn_A Oxidoreductase, GFO/IDH  75.5     3.9 0.00016   19.4   7.1   93    1-118     3-95  (329)
 96 2rjn_A Response regulator rece  75.5     2.1   9E-05   21.1   3.4   17  327-343   107-123 (154)
 97 2pln_A HP1043, response regula  75.1     1.9 8.2E-05   21.4   3.1   34   84-120    58-92  (137)
 98 3cfy_A Putative LUXO repressor  74.9       2 8.3E-05   21.4   3.1   35   86-120    46-82  (137)
 99 3cwo_X Beta/alpha-barrel prote  74.5       1 4.3E-05   23.3   1.5   41   80-120    17-59  (237)
100 3gdo_A Uncharacterized oxidore  74.5     4.1 0.00017   19.3   6.0   91    1-118     3-93  (358)
101 2q8p_A Iron-regulated surface   74.5     4.1 0.00017   19.3   4.6   44   81-128    53-96  (260)
102 3hv2_A Response regulator/HD d  74.5     1.7 7.2E-05   21.8   2.7   22  325-346   112-133 (153)
103 3e82_A Putative oxidoreductase  74.4     1.7   7E-05   21.8   2.6   90    2-118     6-95  (364)
104 3db2_A Putative NADPH-dependen  74.3     1.8 7.6E-05   21.6   2.8   92    1-118     3-94  (354)
105 3hzh_A Chemotaxis response reg  74.3     1.5 6.3E-05   22.1   2.4   19  326-344   137-155 (157)
106 1qop_A Tryptophan synthase alp  74.2     4.2 0.00018   19.2   4.8  121    7-139    22-169 (268)
107 3eul_A Possible nitrate/nitrit  74.0     1.6 6.5E-05   22.0   2.4   17  329-345   118-134 (152)
108 2qxy_A Response regulator; reg  73.8     3.7 0.00016   19.6   4.3   37   83-120    43-81  (142)
109 3c1a_A Putative oxidoreductase  73.6     1.5 6.1E-05   22.2   2.2   89    2-118     9-97  (315)
110 3da8_A Probable 5'-phosphoribo  72.5     1.5 6.4E-05   22.1   2.0   90    2-108    11-110 (215)
111 1zh2_A KDP operon transcriptio  71.7     2.6 0.00011   20.6   3.1   36   85-121    42-79  (121)
112 2ekc_A AQ_1548, tryptophan syn  71.4     4.8  0.0002   18.8   6.3  119    6-138    21-168 (262)
113 2jba_A Phosphate regulon trans  71.2     3.2 0.00014   20.0   3.5   41   81-121    39-83  (127)
114 1hjr_A Holliday junction resol  70.9       5 0.00021   18.7   5.3   74   71-144    42-129 (158)
115 2qr3_A Two-component system re  70.8     2.7 0.00011   20.4   3.0   36   85-120    44-86  (140)
116 1vim_A Hypothetical protein AF  70.8     2.1   9E-05   21.1   2.5   33  194-234    92-124 (200)
117 1mvo_A PHOP response regulator  70.6     2.9 0.00012   20.3   3.1   36   85-120    44-81  (136)
118 2ayx_A Sensor kinase protein R  70.5     3.3 0.00014   19.9   3.4   23  323-345   224-246 (254)
119 2fb9_A D-alanine:D-alanine lig  70.2     3.1 0.00013   20.0   3.2  124    1-162     1-133 (322)
120 3c3m_A Response regulator rece  70.1     3.2 0.00014   20.0   3.3   82    1-123     1-86  (138)
121 3cnb_A DNA-binding response re  70.0     3.3 0.00014   19.9   3.3   37   84-120    50-90  (143)
122 3gt7_A Sensor protein; structu  70.0     3.5 0.00015   19.7   3.5   43   80-122    43-89  (154)
123 2jk1_A HUPR, hydrogenase trans  69.5     2.3 9.5E-05   21.0   2.4   21  326-346    99-119 (139)
124 2pk3_A GDP-6-deoxy-D-LYXO-4-he  69.5     5.3 0.00022   18.5   4.6   34    2-41     11-44  (321)
125 1geq_A Tryptophan synthase alp  69.3     5.3 0.00022   18.5   5.1  120    6-139     9-155 (248)
126 3eqz_A Response regulator; str  68.2     3.7 0.00016   19.6   3.3   37   84-120    42-80  (135)
127 3a28_C L-2.3-butanediol dehydr  67.9     5.7 0.00024   18.3   5.3   36    1-41      1-36  (258)
128 1mb3_A Cell division response   67.7     3.4 0.00014   19.8   3.0   37   85-121    42-82  (124)
129 1ujp_A Tryptophan synthase alp  67.7       4 0.00017   19.4   3.3  120    6-138    20-165 (271)
130 2qsj_A DNA-binding response re  67.5     4.9 0.00021   18.8   3.7   34   86-119    48-83  (154)
131 2i2w_A Phosphoheptose isomeras  67.5     4.1 0.00017   19.3   3.4   24  194-223   134-157 (212)
132 2dy0_A APRT, adenine phosphori  67.4     5.8 0.00025   18.3   7.1   55   63-120    38-92  (190)
133 2yw2_A Phosphoribosylamine--gl  67.2     5.9 0.00025   18.2   7.6   88    4-118     1-90  (424)
134 2vqe_B 30S ribosomal protein S  66.6       6 0.00025   18.2   4.9   19  278-296   173-191 (256)
135 3cvj_A Putative phosphoheptose  66.6       6 0.00025   18.2   7.2  101   16-122    28-143 (243)
136 2x7j_A 2-succinyl-5-enolpyruvy  66.0     6.2 0.00026   18.1   5.2   34   86-122    92-128 (604)
137 3mjf_A Phosphoribosylamine--gl  65.6     6.3 0.00027   18.0   8.2   92    2-118     2-95  (431)
138 2vvp_A Ribose-5-phosphate isom  65.6     6.3 0.00027   18.0   4.3   36    1-40      1-36  (162)
139 1sbz_A Probable aromatic acid   65.5     6.3 0.00027   18.0   4.5   36    4-41      1-36  (197)
140 1obb_A Maltase, alpha-glucosid  65.2     6.4 0.00027   18.0   7.2  116    1-124     1-176 (480)
141 2bw0_A 10-FTHFDH, 10-formyltet  64.8     6.5 0.00027   17.9   5.1   80    1-100    20-111 (329)
142 2qzj_A Two-component response   64.3       5 0.00021   18.7   3.3   37   84-121    44-82  (136)
143 3kcn_A Adenylate cyclase homol  64.3     4.7  0.0002   18.9   3.2   23   97-119    58-81  (151)
144 1yo6_A Putative carbonyl reduc  64.0     6.8 0.00028   17.8   5.8   36    1-40      1-36  (250)
145 1xhf_A DYE resistance, aerobic  63.8     4.7  0.0002   18.9   3.1   36   85-121    44-81  (123)
146 3ff4_A Uncharacterized protein  63.8       4 0.00017   19.3   2.7   86    2-120     2-88  (122)
147 1dc7_A NTRC, nitrogen regulati  63.7       3 0.00012   20.2   2.0   39   82-120    41-81  (124)
148 1a04_A Nitrate/nitrite respons  63.2       5 0.00021   18.7   3.1   35   85-119    48-84  (215)
149 3grc_A Sensor protein, kinase;  63.1     4.4 0.00018   19.1   2.8   33   87-119    49-85  (140)
150 3kht_A Response regulator; PSI  63.1     6.3 0.00027   18.0   3.6   36   85-120    48-87  (144)
151 2ew2_A 2-dehydropantoate 2-red  62.8     5.7 0.00024   18.3   3.4   48    2-54      2-52  (316)
152 1n2z_A Vitamin B12 transport p  61.3     7.6 0.00032   17.5   5.3   61   81-152    50-110 (245)
153 1dz3_A Stage 0 sporulation pro  61.1     5.5 0.00023   18.4   3.0   32   85-116    45-78  (130)
154 1w25_A Stalked-cell differenti  61.0     5.7 0.00024   18.3   3.1   35   85-120    42-81  (459)
155 2vpt_A Lipolytic enzyme; ester  61.0     7.6 0.00032   17.5   7.0   79    3-95      5-90  (215)
156 3fhl_A Putative oxidoreductase  60.8     3.4 0.00014   19.8   1.9   90    1-118     3-93  (362)
157 1vl0_A DTDP-4-dehydrorhamnose   60.8     7.7 0.00032   17.5   4.9   33    2-40     11-43  (292)
158 3nhm_A Response regulator; pro  60.7       5 0.00021   18.7   2.7   34   86-119    45-82  (133)
159 3f6p_A Transcriptional regulat  60.5     7.8 0.00033   17.4   3.9   78    1-121     1-80  (120)
160 3moi_A Probable dehydrogenase;  59.7     7.4 0.00031   17.6   3.5   91    1-117     1-91  (387)
161 3gl9_A Response regulator; bet  59.7     7.4 0.00031   17.6   3.5   40   82-121    40-83  (122)
162 1kgs_A DRRD, DNA binding respo  59.4     7.2  0.0003   17.7   3.4   81    1-123     1-83  (225)
163 1ny5_A Transcriptional regulat  59.2     5.7 0.00024   18.3   2.8   38   83-120    39-78  (387)
164 2wi8_A Iron-uptake system-bind  59.1     7.1  0.0003   17.7   3.3   36   81-120    89-124 (311)
165 3cg4_A Response regulator rece  58.9     5.5 0.00023   18.4   2.7   20  326-345   107-126 (142)
166 2l2q_A PTS system, cellobiose-  58.7     8.4 0.00035   17.2   4.9   44    2-46      3-47  (109)
167 2a9o_A Response regulator; ess  58.2     6.5 0.00027   17.9   3.0   36   85-121    42-79  (120)
168 1s8n_A Putative antiterminator  57.7     6.7 0.00028   17.8   3.0   39   81-120    51-91  (205)
169 3cg0_A Response regulator rece  57.5     6.7 0.00028   17.8   3.0   32   87-119    53-87  (140)
170 2ywr_A Phosphoribosylglycinami  56.9     4.3 0.00018   19.1   1.9   79    4-98      2-90  (216)
171 3etn_A Putative phosphosugar i  56.6     9.1 0.00038   17.0   5.3  134   52-234     9-143 (220)
172 3hn2_A 2-dehydropantoate 2-red  56.4     9.1 0.00038   17.0   4.0   47    1-53      1-48  (312)
173 3k8x_A Acetyl-COA carboxylase;  56.3     8.8 0.00037   17.1   3.4   39    5-44    106-154 (758)
174 2zay_A Response regulator rece  56.2     7.5 0.00032   17.5   3.0   35   86-120    50-88  (147)
175 3euw_A MYO-inositol dehydrogen  55.7     9.3 0.00039   16.9   9.9   90    3-118     4-93  (344)
176 1meo_A Phosophoribosylglycinam  55.6     4.2 0.00018   19.2   1.7   97    5-108     2-100 (209)
177 3kux_A Putative oxidoreductase  55.5     4.1 0.00017   19.3   1.6   89    2-118     6-95  (352)
178 3lou_A Formyltetrahydrofolate   55.0     3.4 0.00014   19.8   1.1   17  327-343   248-264 (292)
179 1ydw_A AX110P-like protein; st  54.9     9.6  0.0004   16.8   8.5   96    2-119     5-100 (362)
180 3n0v_A Formyltetrahydrofolate   54.3       6 0.00025   18.2   2.3   56   95-150    16-81  (286)
181 3c3w_A Two component transcrip  53.3     8.5 0.00036   17.2   2.9   41   82-122    41-83  (225)
182 2q8u_A Exonuclease, putative;   53.0      10 0.00043   16.6   4.8   49   71-119    44-101 (336)
183 3dzd_A Transcriptional regulat  52.8       6 0.00025   18.2   2.1   39   82-120    38-78  (368)
184 3i42_A Response regulator rece  52.6     8.3 0.00035   17.3   2.8  108    1-154     1-112 (127)
185 1m3s_A Hypothetical protein YC  52.3     6.5 0.00027   17.9   2.2   46   90-145    81-129 (186)
186 2z2v_A Hypothetical protein PH  51.9      11 0.00045   16.5   8.6   91    2-118    15-105 (365)
187 3kcq_A Phosphoribosylglycinami  51.6     2.5  0.0001   20.7  -0.0   86    1-98      6-92  (215)
188 3lwb_A D-alanine--D-alanine li  51.5     9.4 0.00039   16.9   2.9   39    1-40      8-51  (373)
189 1jeo_A MJ1247, hypothetical pr  51.5     8.1 0.00034   17.3   2.6   21  211-233    96-116 (180)
190 3m6m_D Sensory/regulatory prot  51.5     9.1 0.00038   17.0   2.8   24   87-110    57-82  (143)
191 1vdm_A Purine phosphoribosyltr  51.2      11 0.00046   16.4   5.0   39   70-110     8-46  (153)
192 1jbe_A Chemotaxis protein CHEY  51.0     9.2 0.00039   16.9   2.8   37   84-120    45-85  (128)
193 2glx_A 1,5-anhydro-D-fructose   50.7     8.1 0.00034   17.3   2.5   89    5-118     2-90  (332)
194 2r79_A Periplasmic binding pro  50.7     8.7 0.00037   17.1   2.6   45   81-128    52-97  (283)
195 3k3p_A D-alanine--D-alanine li  50.6      11 0.00047   16.4   4.7   39    1-40     35-78  (383)
196 3k7p_A Ribose 5-phosphate isom  50.5      11 0.00047   16.4   3.6   10  281-290    96-105 (179)
197 1oaa_A Sepiapterin reductase;   50.0      11 0.00048   16.3   5.7   34    5-40      7-40  (259)
198 3n0r_A Response regulator; sig  49.8     5.3 0.00022   18.5   1.4   94  251-345   160-276 (286)
199 2j48_A Two-component sensor ki  49.7      12 0.00049   16.3   3.5   40   83-122    40-83  (119)
200 2fsv_C NAD(P) transhydrogenase  49.7      12 0.00049   16.3   5.6  130  191-327    45-188 (203)
201 2rdm_A Response regulator rece  49.6      12 0.00049   16.3   3.4   35   87-121    49-86  (132)
202 2i2x_B MTAC, methyltransferase  49.6      12 0.00049   16.3   5.1   29  207-235   185-213 (258)
203 1p6q_A CHEY2; chemotaxis, sign  49.5     9.5  0.0004   16.9   2.7   36   85-120    48-87  (129)
204 1q0q_A 1-deoxy-D-xylulose 5-ph  49.4      12 0.00049   16.3   5.1   28  318-345   346-373 (406)
205 3a06_A 1-deoxy-D-xylulose 5-ph  49.3      12 0.00049   16.2   6.5   29  318-346   312-340 (376)
206 3kto_A Response regulator rece  48.9      11 0.00046   16.4   2.9   36   84-119    46-85  (136)
207 1xg5_A ARPG836; short chain de  48.6      12 0.00051   16.2   4.9   23    5-29     33-55  (279)
208 1ys7_A Transcriptional regulat  48.0      11 0.00047   16.4   2.8   79    1-120     5-85  (233)
209 1e2b_A Enzyme IIB-cellobiose;   47.9      12 0.00052   16.1   5.6   89    1-132     1-90  (106)
210 3ioy_A Short-chain dehydrogena  47.7      12 0.00052   16.1   4.5   39    5-46      9-47  (319)
211 2ip4_A PURD, phosphoribosylami  47.5      13 0.00053   16.1   7.6   87    4-118     1-89  (417)
212 3c8e_A YGHU, glutathione S-tra  47.5     4.2 0.00018   19.2   0.6   20  118-137     4-23  (288)
213 2gkg_A Response regulator homo  47.3      13 0.00053   16.0   3.9   38   84-121    45-87  (127)
214 1l1q_A Adenine phosphoribosylt  47.1      13 0.00053   16.0   6.6   54   64-120    29-82  (186)
215 3ius_A Uncharacterized conserv  46.3      13 0.00055   16.0   4.4   33    1-41      4-36  (286)
216 2cfc_A 2-(R)-hydroxypropyl-COM  45.9      13 0.00056   15.9   6.2   39    1-44      1-39  (250)
217 3nrb_A Formyltetrahydrofolate   45.8     8.3 0.00035   17.2   1.9   36   86-121    86-122 (287)
218 1hyh_A L-hicdh, L-2-hydroxyiso  45.7      13 0.00056   15.9   5.8   25  310-335   263-287 (309)
219 1pzg_A LDH, lactate dehydrogen  45.1      14 0.00057   15.8   5.4   62  270-335   245-306 (331)
220 3fef_A Putative glucosidase LP  45.1      14 0.00057   15.8   7.1   51   62-118   115-166 (450)
221 2bru_C NAD(P) transhydrogenase  45.0      14 0.00057   15.8   4.4  132  191-324    29-169 (186)
222 3c97_A Signal transduction his  44.8      12 0.00052   16.1   2.7   23   87-109    53-77  (140)
223 2pvp_A D-alanine-D-alanine lig  44.5      14 0.00058   15.8   3.0   29    1-29     18-51  (367)
224 3jte_A Response regulator rece  44.3      14 0.00059   15.8   3.1   32   88-119    49-82  (143)
225 2ppv_A Uncharacterized protein  44.1      14 0.00059   15.7   3.3   50    1-57      2-60  (332)
226 1rtt_A Conserved hypothetical   44.1      14 0.00059   15.7   4.3   35    2-36      5-39  (193)
227 3ko8_A NAD-dependent epimerase  43.9      14  0.0006   15.7   4.6   31    4-40      1-31  (312)
228 1spx_A Short-chain reductase f  43.8      14  0.0006   15.7   4.6   41    1-44      1-43  (278)
229 2a33_A Hypothetical protein; s  43.5      14 0.00061   15.7   5.6  143  193-347    14-195 (215)
230 3mwf_A Iron-regulated ABC tran  43.4      14 0.00061   15.7   2.9   35   81-120    76-110 (298)
231 3gfv_A Uncharacterized ABC tra  43.3     6.9 0.00029   17.8   1.2   20   81-100    88-107 (303)
232 3bre_A Probable two-component   43.0      13 0.00053   16.0   2.5   38   84-121    59-100 (358)
233 1zn8_A APRT, adenine phosphori  42.7      15 0.00062   15.6   6.3   55   63-120    29-86  (180)
234 1d4o_A NADP(H) transhydrogenas  42.7      15 0.00062   15.6   4.7  134  192-327    22-164 (184)
235 1mld_A Malate dehydrogenase; o  42.6      12 0.00049   16.3   2.2   27  307-334   260-287 (314)
236 3nkl_A UDP-D-quinovosamine 4-d  42.5      15 0.00063   15.6   6.9  103    4-134     5-110 (141)
237 1udb_A Epimerase, UDP-galactos  42.5      15 0.00063   15.6   7.4   31    4-40      1-31  (338)
238 1j9j_A Stationary phase surviV  42.5      13 0.00054   16.0   2.4   12   83-94     81-92  (247)
239 1jq5_A Glycerol dehydrogenase;  42.4      15 0.00063   15.6   4.7   87    5-125    33-119 (370)
240 1zgz_A Torcad operon transcrip  42.4      15 0.00063   15.6   3.1   34   86-120    44-79  (122)
241 1gud_A ALBP, D-allose-binding   42.2      15 0.00063   15.5  10.4  204    4-254     2-221 (288)
242 2oqr_A Sensory transduction pr  42.0      15 0.00064   15.5   2.9   78    1-121     3-82  (230)
243 3obi_A Formyltetrahydrofolate   42.0     9.5  0.0004   16.9   1.7   17  327-343   243-259 (288)
244 3bbn_B Ribosomal protein S2; s  42.0      15 0.00064   15.5   4.9   18  279-296   173-190 (231)
245 2ho3_A Oxidoreductase, GFO/IDH  41.8      15 0.00064   15.5   7.9   89    4-118     2-90  (325)
246 1rd5_A Tryptophan synthase alp  41.7      14 0.00058   15.8   2.5   10    7-16     23-32  (262)
247 3h5i_A Response regulator/sens  41.7      15 0.00064   15.5   3.1   35   86-121    48-85  (140)
248 2aqj_A Tryptophan halogenase,   41.7     4.7  0.0002   18.8   0.1   27    1-27      1-29  (538)
249 2ejb_A Probable aromatic acid   41.2      16 0.00065   15.4   4.7   32    6-40      4-35  (189)
250 1l5x_A SurviVal protein E; str  41.2      14 0.00057   15.8   2.4   33   86-118    82-123 (280)
251 1o97_C Electron transferring f  41.1      16 0.00066   15.4   6.9   94   15-121    38-146 (264)
252 2xbl_A Phosphoheptose isomeras  41.0      16 0.00066   15.4   5.3   31   88-120   116-149 (198)
253 3i23_A Oxidoreductase, GFO/IDH  40.6      16 0.00067   15.4   7.1   89    1-118     1-93  (349)
254 2gwr_A DNA-binding response re  40.4      13 0.00056   15.9   2.3   38   84-122    45-84  (238)
255 1yxo_A 4-hydroxythreonine-4-ph  40.2      16 0.00068   15.3   7.9  104    1-109     1-144 (328)
256 1n2s_A DTDP-4-, DTDP-glucose o  40.0      13 0.00056   15.9   2.2   60    4-94      1-60  (299)
257 3f6n_A Virion-associated prote  39.8      16 0.00069   15.3   5.1   27   64-90     12-38  (129)
258 3nbm_A PTS system, lactose-spe  39.6      16 0.00069   15.3   5.8   84    2-100     5-89  (108)
259 1usg_A Leucine-specific bindin  39.2      17  0.0007   15.2   4.2   36   84-121    65-100 (346)
260 3ic5_A Putative saccharopine d  38.7      17 0.00071   15.2   8.3   87    1-116     4-95  (118)
261 3p7m_A Malate dehydrogenase; p  38.5      17 0.00072   15.2   4.1   24    1-28      3-26  (321)
262 3ecs_A Translation initiation   38.1      17 0.00073   15.1   8.9  149  191-349   121-309 (315)
263 3lte_A Response regulator; str  37.5      18 0.00075   15.1   3.6   25   86-110    48-74  (132)
264 1geg_A Acetoin reductase; SDR   37.1      18 0.00075   15.0   5.9   33    1-40      1-33  (256)
265 1djl_A Transhydrogenase DIII;   37.1      18 0.00076   15.0   4.9  135  191-327    44-187 (207)
266 3hsk_A Aspartate-semialdehyde   37.0      10 0.00044   16.6   1.3  148    1-171    17-173 (381)
267 1vkm_A Conserved hypothetical   36.0      13 0.00054   16.0   1.6   48  262-310   143-200 (297)
268 1fjh_A 3alpha-hydroxysteroid d  35.1      19 0.00081   14.8   4.8   33    4-41      1-33  (257)
269 3bpp_A 1510-N membrane proteas  34.7      20 0.00082   14.8   4.9   64   78-145    28-97  (230)
270 2d4a_B Malate dehydrogenase; a  34.3      20 0.00084   14.7   5.0   61  270-334   223-283 (308)
271 3aek_A Light-independent proto  33.9      20 0.00085   14.7   3.5  171   54-251    86-279 (437)
272 3ff6_A Acetyl-COA carboxylase   33.5      20 0.00086   14.7   3.9   22  271-292   479-501 (760)
273 2hjs_A USG-1 protein homolog;   33.0      21 0.00088   14.6   8.2   94    1-119     3-97  (340)
274 2hqr_A Putative transcriptiona  33.0      21 0.00088   14.6   4.1   38   82-121    38-75  (223)
275 3brs_A Periplasmic binding pro  33.0      21 0.00088   14.6   3.2   39   79-120    56-96  (289)
276 3ghy_A Ketopantoate reductase   32.7      21 0.00089   14.6   3.7   49    1-54      1-51  (335)
277 3heb_A Response regulator rece  32.6      21 0.00089   14.6   2.7   38   83-120    54-95  (152)
278 2g36_A Tryptophanyl-tRNA synth  32.2      18 0.00077   15.0   1.9   27    1-28     10-36  (340)
279 3fvw_A Putative NAD(P)H-depend  32.1      22 0.00091   14.5   3.9   36    1-37      1-36  (192)
280 2bll_A Protein YFBG; decarboxy  31.7      22 0.00092   14.5   4.2   32    4-40      1-32  (345)
281 1g2q_A Adenine phosphoribosylt  31.7      22 0.00092   14.5   6.1   53   63-120    30-88  (187)
282 2v4n_A Multifunctional protein  31.2      15 0.00065   15.5   1.4   40   81-120    77-124 (254)
283 1ccw_A Protein (glutamate muta  31.1      22 0.00094   14.4   6.2   38    1-40      1-38  (137)
284 3hsy_A Glutamate receptor 2; l  31.1      22 0.00094   14.4   4.1   33   86-120    58-90  (376)
285 3hwr_A 2-dehydropantoate 2-red  31.0      22 0.00095   14.4   2.2   47    1-53     17-66  (318)
286 3guy_A Short-chain dehydrogena  30.9      23 0.00095   14.4   4.6   40    4-46      1-40  (230)
287 1smk_A Malate dehydrogenase, g  30.9      22 0.00092   14.4   2.1   27  307-334   268-295 (326)
288 2chu_A CEUE, enterochelin upta  30.8      23 0.00095   14.4   3.5   28   81-111    88-115 (296)
289 1vl8_A Gluconate 5-dehydrogena  30.7      23 0.00096   14.4   5.2   32    5-39     22-53  (267)
290 1qb7_A APRT, adenine phosphori  30.6      23 0.00096   14.3   5.9   45   71-120    52-100 (236)
291 2dc1_A L-aspartate dehydrogena  30.2      23 0.00097   14.3   8.1   78    4-118     1-78  (236)
292 3lkb_A Probable branched-chain  29.7      24 0.00099   14.2   3.8   36   82-120    69-104 (392)
293 3e8x_A Putative NAD-dependent   29.6      24   0.001   14.2   4.8   34    1-40     19-52  (236)
294 3bb8_A CDP-4-keto-6-deoxy-D-gl  29.5     6.3 0.00026   18.0  -0.8   47   84-132   154-203 (437)
295 1pj3_A NAD-dependent malic enz  29.5      21 0.00089   14.6   1.9   87   62-148    95-227 (564)
296 1vi6_A 30S ribosomal protein S  29.5      24   0.001   14.2   3.3   20  277-296   129-148 (208)
297 3o1l_A Formyltetrahydrofolate   29.4      20 0.00084   14.7   1.7   25   86-110   103-128 (302)
298 3ehd_A Uncharacterized conserv  29.1      22 0.00093   14.4   1.9   33  262-296    64-106 (162)
299 1o57_A PUR operon repressor; p  28.9      24   0.001   14.2   5.2   45   71-120   112-159 (291)
300 1c8b_A Spore protease; novel f  28.7      19 0.00079   14.9   1.5   13   85-97    183-195 (371)
301 2c82_A 1-deoxy-D-xylulose 5-ph  28.6      25   0.001   14.1   4.8   28  318-345   329-356 (413)
302 3fdj_A DEGV family protein; GU  28.4      17 0.00072   15.2   1.2   13  217-229    98-110 (278)
303 1b73_A Glutamate racemase; iso  28.2      25  0.0011   14.1   6.8   98    4-127     1-99  (254)
304 1oc2_A DTDP-glucose 4,6-dehydr  28.1      25  0.0011   14.1   5.2   37    1-40      1-37  (348)
305 1wb0_A Chitinase 1, chitotrios  28.0      25  0.0011   14.1   9.8  159   16-197    52-243 (445)
306 1uls_A Putative 3-oxoacyl-acyl  27.9      25  0.0011   14.0   7.5   31    5-40      6-36  (245)
307 3mc6_A Sphingosine-1-phosphate  27.9      25  0.0011   14.0   4.3   14  335-348   429-442 (497)
308 1efp_B ETF, protein (electron   27.6      26  0.0011   14.0   3.3   94   16-122    39-148 (252)
309 1yvr_A RO autoantigen, 60-kDa   27.6      21 0.00089   14.5   1.6   12   99-110   143-154 (538)
310 2fvy_A D-galactose-binding per  27.5      26  0.0011   14.0   4.5   84    4-120     3-90  (309)
311 3b8x_A WBDK, pyridoxamine 5-ph  27.3      14 0.00061   15.7   0.7   41   85-127   125-168 (390)
312 2pgn_A Cyclohexane-1,2-dione h  27.2      26  0.0011   14.0   5.3   36   86-122    66-102 (589)
313 3hdv_A Response regulator; PSI  27.0      25  0.0011   14.1   1.9   14   96-109    15-28  (136)
314 1vkz_A Phosphoribosylamine--gl  26.8      26  0.0011   13.9   4.7   42    1-48     13-54  (412)
315 2x9g_A PTR1, pteridine reducta  26.7      27  0.0011   13.9   2.8   31    5-40     24-54  (288)
316 3nep_X Malate dehydrogenase; h  26.5      27  0.0011   13.9   5.2   33    4-40      1-34  (314)
317 2vk2_A YTFQ, ABC transporter p  26.4      27  0.0011   13.9   3.4   90    2-123     1-92  (306)
318 2etv_A Iron(III) ABC transport  26.3      27  0.0011   13.9   4.5   65   81-152    89-153 (346)
319 3lxy_A 4-hydroxythreonine-4-ph  26.3      27  0.0011   13.9   9.0  101    5-109    10-149 (334)
320 2qk4_A Trifunctional purine bi  25.7      28  0.0012   13.8   6.6   87    4-118    25-116 (452)
321 1d4a_A DT-diaphorase, quinone   25.6      28  0.0012   13.8   8.7   52    1-59      1-56  (273)
322 1pt6_A Integrin alpha-1; X-RAY  25.5      28  0.0012   13.8   4.1   12   88-99      7-18  (213)
323 3ofo_B 30S ribosomal protein S  25.2      28  0.0012   13.7   5.5   19  278-296   164-182 (218)
324 3lhs_A Ferrichrome ABC transpo  25.2      28  0.0012   13.7   3.2   28   81-110    78-105 (296)
325 1ez4_A Lactate dehydrogenase;   25.1      28  0.0012   13.7   5.6   24    2-29      4-27  (318)
326 3ck2_A Conserved uncharacteriz  25.0      18 0.00076   15.0   0.8   36    1-42      4-41  (176)
327 2hl0_A Threonyl-tRNA synthetas  25.0      18 0.00077   15.0   0.8   70   73-174    57-137 (143)
328 1o0s_A NAD-ME, NAD-dependent m  24.6      29  0.0012   13.7   2.1   62   86-147   168-262 (605)
329 2bln_A Protein YFBG; transfera  24.5      29  0.0012   13.6   7.0   81    4-99      1-86  (305)
330 2oga_A Transaminase; PLP-depen  24.2      18 0.00075   15.1   0.7   44   86-131   149-195 (399)
331 1t2d_A LDH-P, L-lactate dehydr  24.1      30  0.0012   13.6   5.4   24  310-334   274-297 (322)
332 3lyu_A Putative hydrogenase; t  23.8      30  0.0013   13.6   5.0   39   79-119    98-136 (142)
333 2pzm_A Putative nucleotide sug  23.8      30  0.0013   13.6   4.0   32    2-39     19-50  (330)
334 3iac_A Glucuronate isomerase;   23.7      30  0.0013   13.5   3.8  107   58-172   113-250 (473)
335 2v6b_A L-LDH, L-lactate dehydr  23.7      30  0.0013   13.5   2.1   34    4-41      1-35  (304)
336 3gpi_A NAD-dependent epimerase  23.6      30  0.0013   13.5   4.0   33    1-40      1-33  (286)
337 1ll7_A Chitinase 1; beta-alpha  23.5      30  0.0013   13.5   9.4  110   20-146    74-202 (392)
338 3i65_A Dihydroorotate dehydrog  23.5      30  0.0013   13.5   4.1   39  329-367   353-402 (415)
339 3inp_A D-ribulose-phosphate 3-  23.2      31  0.0013   13.5   2.8   18  194-211   138-155 (246)
340 2f62_A Nucleoside 2-deoxyribos  23.2      31  0.0013   13.5   2.1   33  262-296    62-107 (161)
341 1pno_A NAD(P) transhydrogenase  23.1      31  0.0013   13.5   5.7  135  191-327    22-165 (180)
342 3kyj_B CHEY6 protein, putative  22.9      31  0.0013   13.4   2.0   25   87-111    59-85  (145)
343 3k4t_A Virion-associated prote  22.7      32  0.0013   13.4   5.8   47  332-381     3-53  (95)
344 3l9w_A Glutathione-regulated p  22.2      32  0.0014   13.4   9.0   89    3-118     4-99  (413)
345 3md9_A Hemin-binding periplasm  21.8      33  0.0014   13.3   4.1   63   80-152    51-113 (255)
346 3g6m_A Chitinase, crchi1; inhi  21.8      33  0.0014   13.3   7.9  123   21-167    93-234 (406)
347 2el7_A Tryptophanyl-tRNA synth  21.6      22 0.00094   14.4   0.8   25    4-28      1-25  (337)
348 2nx2_A Hypothetical protein YP  21.6      33  0.0014   13.3   3.2   51   68-118    23-76  (181)
349 1zun_A Sulfate adenylyltransfe  21.6      33  0.0014   13.3   4.1   80   88-171    75-158 (325)
350 1o69_A Aminotransferase; struc  21.5      15 0.00062   15.6  -0.2   43   81-125   115-160 (394)
351 2jfz_A Glutamate racemase; cel  21.4      33  0.0014   13.3   7.8   99    4-128     1-100 (255)
352 3hbl_A Pyruvate carboxylase; T  21.3      34  0.0014   13.2   4.4  105    1-125     1-110 (1150)
353 2p6n_A ATP-dependent RNA helic  21.1      34  0.0014   13.2   5.0   41   78-120    44-84  (191)
354 3lop_A Substrate binding perip  21.0      34  0.0014   13.2   3.8   41   79-121    64-106 (364)
355 3h6g_A Glutamate receptor, ion  21.0      34  0.0014   13.2   5.2   37   86-124    69-105 (395)
356 2ehd_A Oxidoreductase, oxidore  21.0      34  0.0014   13.2   4.4   35    1-40      1-36  (234)
357 2qyt_A 2-dehydropantoate 2-red  20.9      34  0.0014   13.2   5.6   55    2-57      7-66  (317)
358 3ego_A Probable 2-dehydropanto  20.9      34  0.0014   13.2   2.5   47    1-54      1-50  (307)
359 1o1x_A Ribose-5-phosphate isom  20.9      34  0.0014   13.2   3.6   35    2-40     11-45  (155)
360 2dkn_A 3-alpha-hydroxysteroid   20.8      34  0.0014   13.2   4.6   32    4-40      1-32  (255)
361 2i2c_A Probable inorganic poly  20.7      35  0.0015   13.2   3.2   34   87-120    34-67  (272)
362 1ko7_A HPR kinase/phosphatase;  20.7      35  0.0015   13.2   2.6   76   37-119    29-109 (314)
363 1iy8_A Levodione reductase; ox  20.7      35  0.0015   13.1   4.6   36    5-43     14-49  (267)
364 2jky_A Hypoxanthine-guanine ph  20.7      35  0.0015   13.1   3.9   37   73-109    13-51  (213)
365 2qip_A Protein of unknown func  20.5      35  0.0015   13.1   3.0   16   85-100     6-21  (165)
366 3dfi_A Pseudoaglycone deacetyl  20.5      35  0.0015   13.1   3.8   17   78-94    135-151 (270)
367 2bd0_A Sepiapterin reductase;   20.5      35  0.0015   13.1   6.4   25    1-29      1-25  (244)

No 1  
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83  E-value=8.1e-18  Score=136.12  Aligned_cols=339  Identities=15%  Similarity=0.176  Sum_probs=203.1

Q ss_pred             CCCC--EEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECC----HHHHHCCCEEE-ECHHHCCEEEHHHHHHHHHH
Q ss_conf             9874--5999976821478999-999999973899839999717----89994788065-04445311013674664599
Q gi|254780767|r    1 MNSL--KIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGG----PSLQKEGLVSL-FDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         1 m~~m--ki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG----~~m~~~G~~~~-~~~~~l~v~G~~evl~~~~~   72 (383)
                      |+++  ||+|+||.+.|++..| .|+++|+++ +.++.|.+.+.    +...+.|.+.. .++..+.--|+...+.....
T Consensus         2 ~~~~~kkili~t~GtGGHi~~a~ala~~L~~~-g~eV~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   80 (364)
T 1f0k_A            2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLR   80 (364)
T ss_dssp             -----CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEEECCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
T ss_conf             99999769998689799999999999999968-89899998388005431221399579997788687772899999999


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEE-CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
Q ss_conf             99999999861001288868985-11776579999866301346311110022110036635579999986401567742
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIV-DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEK  151 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~i-D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~  151 (383)
                      ..+.+......+...+||.++.+ +++.+-  .+...+.  .++|++.+. ++.|.  .+-.+....+.|.+..-     
T Consensus        81 ~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~--~~~~a~~--~~ip~~~~~-~~~~~--~~~~~~~~~~~~~~~~~-----  148 (364)
T 1f0k_A           81 IFNAWRQARAIMKAYKPDVVLGMGGYVSGP--GGLAAWS--LGIPVVLHE-QNGIA--GLTNKWLAKIATKVMQA-----  148 (364)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEECSSTTHHH--HHHHHHH--TTCCEEEEE-CSSSC--CHHHHHHTTTCSEEEES-----
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCH--HHHHHHH--CCCCEEEEE-ECEEC--CHHHHHHHHHCCEEEEC-----
T ss_conf             999999999999864777799846755686--9999753--588789985-12023--51477665414433210-----


Q ss_pred             HHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEE
Q ss_conf             23200255314763882112210013558889761876556505998538743012305111899987640273512620
Q gi|254780767|r  152 EVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSL  231 (383)
Q Consensus       152 ~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i  231 (383)
                        +... .....++|+|....+.....   ...+....++...+.++.||..+...  ...+.+.+..+...   ...++
T Consensus       149 --~~~~-~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~il~~~gs~G~~~~--~~~~~~~~~~l~~~---~~~v~  217 (364)
T 1f0k_A          149 --FPGA-FPNAEVVGNPVRTDVLALPL---PQQRLAGREGPVRVLVVGGSQGARIL--NQTMPQVAAKLGDS---VTIWH  217 (364)
T ss_dssp             --STTS-SSSCEECCCCCCHHHHTSCC---HHHHHTTCCSSEEEEEECTTTCCHHH--HHHHHHHHHHHGGG---EEEEE
T ss_pred             --CCCC-CCCCEEECCCCCCHHHCCCH---HHHHHCCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHHHCC---CEEEE
T ss_conf             --2344-55540557865412210214---55430246787531324677320225--68899999985026---55999


Q ss_pred             CCC-CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHH-HHHHHCCCEEEE-CCCCC-CEEEEEE-CC
Q ss_conf             166-3368899999960488850552055203578876355233115668-887627530254-05774-1000010-24
Q gi|254780767|r  232 VTV-SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVIL-ELALCGIPVVSI-YKSEW-IVNFFIF-YI  306 (383)
Q Consensus       232 ~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~g~P~IV~-Yk~~~-lt~~i~~-li  306 (383)
                      ... ................+..+.-...+..++|+.||++|+.+|..|+ |++.+|+|+|++ +.... -....+. +.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~m~~lm~~aDlvIt~aG~~Ti~E~l~~g~P~I~iP~~~~~~~Q~~NA~~l~  297 (364)
T 1f0k_A          218 QSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE  297 (364)
T ss_dssp             ECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             94441377787776640465415312787799999846777745884058899863898899807998776999999999


Q ss_pred             CCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             6761023024407842612420548989999999998449899999999999999983899998999999999861
Q gi|254780767|r  307 KTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       307 k~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~L  382 (383)
                      +.-. +        .+++   |++.+++.+.+.+..+  |++.+.+|.++++    +++.+. +.++.|+.|.++.
T Consensus       298 ~~G~-~--------~~i~---~~~l~~e~l~~~l~~l--~~~~l~~m~~~~~----~~~~~~-~~~~I~~~I~~l~  354 (364)
T 1f0k_A          298 KAGA-A--------KIIE---QPQLSVDAVANTLAGW--SRETLLTMAERAR----AASIPD-ATERVANEVSRVA  354 (364)
T ss_dssp             HTTS-E--------EECC---GGGCCHHHHHHHHHTC--CHHHHHHHHHHHH----HTCCTT-HHHHHHHHHHHHH
T ss_pred             HCCC-E--------EEEC---HHCCCHHHHHHHHHHH--CHHHHHHHHHHHH----CCCCCC-HHHHHHHHHHHHH
T ss_conf             7899-9--------9905---2109999999999863--9999999999987----258988-9999999999999


No 2  
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.73  E-value=8.6e-16  Score=122.74  Aligned_cols=340  Identities=13%  Similarity=0.069  Sum_probs=209.3

Q ss_pred             CC-EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEE-ECCHHH-------HHCCCEEEECHHHCCEEEHHHHHHHHHHH
Q ss_conf             74-5999976821478999999999973899839999-717899-------94788065044453110136746645999
Q gi|254780767|r    3 SL-KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVG-VGGPSL-------QKEGLVSLFDFSELSVIGIMQVVRHLPQF   73 (383)
Q Consensus         3 ~m-ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~g-iGG~~m-------~~~G~~~~~~~~~l~v~G~~evl~~~~~~   73 (383)
                      .| ||++++|--+-=...+.|+++|++.  +++++.= +.|.+.       ..-|++.-+++   ++.+-...+.  -.+
T Consensus         4 ~MkkI~~v~GtR~e~~k~~pl~~~l~~~--~~~~~~li~tG~H~~~~~~~~~~~gi~~d~~~---~~~~~~~~~~--~~~   76 (376)
T 1v4v_A            4 GMKRVVLAFGTRPEATKMAPVYLALRGI--PGLKPLVLLTGQHREQLRQALSLFGIQEDRNL---DVMQERQALP--DLA   76 (376)
T ss_dssp             CCEEEEEEECSHHHHHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHTTTCCCSEEC---CCCSSCCCHH--HHH
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHHHHHHC--CCCCEEEEECCCCHHHHHCCCHHCCCCCCCCC---CCCCCCCCHH--HHH
T ss_conf             9988999997018499999999999728--99988999826885667471134099766567---8888888899--999


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC------CCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             9999999861001288868985117765799998663013463111100------2211003663557999998640156
Q gi|254780767|r   74 IFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC------PSVWAWREGRARKMCAYINQVISIL  147 (383)
Q Consensus        74 ~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~------PqvWAWr~~R~k~~~~~~d~~~~if  147 (383)
                      -+....+.+.+.+.+||+|+...-....|-.|=.++.  .+||++|+-+      .+-|++.+..-+.+.+..|..+|-.
T Consensus        77 ~~~~~~~~~il~~~kpD~Vlv~GDr~~~la~a~aa~~--~~ipi~HiegG~rsg~~~~~~~ee~~R~~i~~ls~~hf~~~  154 (376)
T 1v4v_A           77 ARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFL--EGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPT  154 (376)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHH--TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESS
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEECC
T ss_conf             9999999999740599989996897079999999986--29747986617666666766346656222143341776266


Q ss_pred             CCCHHHHHCCCCC---CEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCC
Q ss_conf             7742232002553---1476388211221001355888976187655650599853874301230511189998764027
Q gi|254780767|r  148 PFEKEVMQRLGGP---PTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRN  224 (383)
Q Consensus       148 pFE~~~f~k~~~~---~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~  224 (383)
                      +...+-..+. |.   ++..||+|..|.+....   +..+.......++.+.+. --|.... ....-+.+++..+.+..
T Consensus       155 ~~~~~~L~~~-G~~~~~I~~vG~p~iD~i~~~~---~~~~~~~~~~~~~~~lvt-~H~~~n~-~~~~~~~~~~~~~~~~~  228 (376)
T 1v4v_A          155 PLAKANLLKE-GKREEGILVTGQTGVDAVLLAA---KLGRLPEGLPEGPYVTVT-MHRRENW-PLLSDLAQALKRVAEAF  228 (376)
T ss_dssp             HHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHH---HHCCCCTTCCSSCEEEEC-CCCGGGG-GGHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHC-CCCCCEEEEECCCHHHHHHHHH---HHHHCHHHHCCCCEEEEE-ECCCCCC-HHHHHHHHHHHHHHHHC
T ss_conf             8899999860-6677629981762488899999---863012330444315898-4255541-04889999999998646


Q ss_pred             CCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEEE--CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC-CCCCE
Q ss_conf             351262016633688--999999604888505520--5520357887635523311566888762753025405-77410
Q gi|254780767|r  225 PFFRFSLVTVSSQEN--LVRCIVSKWDISPEIIID--KEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYK-SEWIV  299 (383)
Q Consensus       225 ~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~~--~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk-~~~lt  299 (383)
                      ++..++++..+....  ......+. ..+..++-.  ..+...+++.|+++++-||+...|++.+|+|+|++-. +.+-.
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~~~~~-~~ni~~i~~l~~~~~l~ll~~s~~vignSss~i~Ea~~lg~P~I~ir~~~eRqe  307 (376)
T 1v4v_A          229 PHLTFVYPVHLNPVVREAVFPVLKG-VRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPE  307 (376)
T ss_dssp             TTSEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECSSSCSCHH
T ss_pred             CCCCEEECCCCCHHHHHHHHHHHHC-CCCCEEECCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCEEEECCCCCCHH
T ss_conf             6662231357621235677776513-342013147547889998763218971782199999981997898178766888


Q ss_pred             EEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             00010246761023024407842612420548989999999998449899999999999999983899998999999999
Q gi|254780767|r  300 NFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVL  379 (383)
Q Consensus       300 ~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~  379 (383)
                      .     +          -.|.-+.     -..+++.|.+++..+++|+..+.++.+    ...-.| .|.|+++-+++|.
T Consensus       308 g-----~----------~~g~~~l-----v~~d~~~I~~~i~~~l~~~~~~~~~~~----~~npYG-dG~as~rI~~~L~  362 (376)
T 1v4v_A          308 G-----L----------KAGILKL-----AGTDPEGVYRVVKGLLENPEELSRMRK----AKNPYG-DGKAGLMVARGVA  362 (376)
T ss_dssp             H-----H----------HHTSEEE-----CCSCHHHHHHHHHHHHTCHHHHHHHHH----SCCSSC-CSCHHHHHHHHHH
T ss_pred             H-----H----------HCCEEEE-----CCCCHHHHHHHHHHHHHCHHHHHHHCC----CCCCCC-CCHHHHHHHHHHH
T ss_conf             9-----9----------7390387-----379999999999999709898875102----789898-9879999999999


Q ss_pred             HHCC
Q ss_conf             8619
Q gi|254780767|r  380 QVLG  383 (383)
Q Consensus       380 ~~Lg  383 (383)
                      ++|+
T Consensus       363 ~~l~  366 (376)
T 1v4v_A          363 WRLG  366 (376)
T ss_dssp             HHTT
T ss_pred             HHHC
T ss_conf             9858


No 3  
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.71  E-value=4.1e-14  Score=111.63  Aligned_cols=344  Identities=13%  Similarity=0.111  Sum_probs=183.6

Q ss_pred             CCCCEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEECHHHCCEEEHHH-----------H
Q ss_conf             98745999976821478999-99999997389983999971--7899947880650444531101367-----------4
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLFDFSELSVIGIMQ-----------V   66 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~~~~~l~v~G~~e-----------v   66 (383)
                      |++.+|+++++-..||+..+ .|.++|.++ +.++.+.+-+  .+..++.|++...--......+..+           .
T Consensus         2 m~~~~il~~~~~g~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (402)
T 3ia7_A            2 MRQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLH   80 (402)
T ss_dssp             CCCCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             999989998998464799999999999988-8989999781066688866986897377644234543223344215678


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHH-HHHHHHHHHCCCCCCEEEECCCCCCCC------------CC--
Q ss_conf             664599999999998610012888689851177657-999986630134631111002211003------------66--
Q gi|254780767|r   67 VRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTH-RVAKRVRKKMPNLPIINYVCPSVWAWR------------EG--  131 (383)
Q Consensus        67 l~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl-~lak~lkk~~~~ipvi~yv~PqvWAWr------------~~--  131 (383)
                      ...+.......+.+.+.+.+.+||++|.-.++-+-. ..|+.     .++|.+.... ..|.|.            ..  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~~a~~-----~~~P~v~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (402)
T 3ia7_A           81 LVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAAR-----WDRPAVRLTG-GFAANEHYSLFKELWKSNGQRH  154 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHH-----HTCCEEEEES-SCCCBTTBCHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-----HCCCEEEEEE-CCCCCCCCCCCCHHHCCCCCCC
T ss_conf             999999999999999987434986896267400279999998-----0898799972-2454432212201100112222


Q ss_pred             --CHHHHHHHHHHHC---------------------CCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             --3557999998640---------------------15677422320025531476388211221001355888976187
Q gi|254780767|r  132 --RARKMCAYINQVI---------------------SILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNT  188 (383)
Q Consensus       132 --R~k~~~~~~d~~~---------------------~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~  188 (383)
                        ....+.+..+.+.                     ..++.+.+...........++|-++....       ........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~  227 (402)
T 3ia7_A          155 PADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGRD-------GQPGWQPP  227 (402)
T ss_dssp             GGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC-----------CCCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCEEECCCCCCCCC-------CCCCCCCC
T ss_conf             24689999999999998288973266663011012305763214665556772554365445521-------00100003


Q ss_pred             CCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
Q ss_conf             65565059985387430123051118999876402735126201663368899999960488850552055203578876
Q gi|254780767|r  189 PSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTC  268 (383)
Q Consensus       189 ~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~s  268 (383)
                      ..+.+.|.+.-||........+.   ..++.+.+.  ...+++...+....   ........+..+. ...+...++.++
T Consensus       228 ~~~~~~v~~~~g~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~l~~~v~~~-~~~~~~~~l~~~  298 (402)
T 3ia7_A          228 RPDAPVLLVSLGNQFNEHPEFFR---ACAQAFADT--PWHVVMAIGGFLDP---AVLGPLPPNVEAH-QWIPFHSVLAHA  298 (402)
T ss_dssp             STTCCEEEEECCSCSSCCHHHHH---HHHHHHTTS--SCEEEEECCTTSCG---GGGCSCCTTEEEE-SCCCHHHHHTTE
T ss_pred             CCCCCEEEECCCCCCCCCHHHHH---HHHHHHHHC--CCEEEEEECCCCCH---HHHHCCCCCEEEE-ECCCHHHHHHCC
T ss_conf             67785698647753337899999---999998746--95799961898875---5662079978995-116726653100


Q ss_pred             HHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf             355233115668-8876275302540577410000102467610230244078426124205489899999999984498
Q gi|254780767|r  269 NAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDT  347 (383)
Q Consensus       269 d~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~  347 (383)
                      |++|+.+|..|+ |++.+|+|+|++.-.+.=.......+.-.-+|+        .++   .+++|++.|++++.++++|+
T Consensus       299 ~~~i~~gG~~t~~Eal~~G~P~v~iP~~~~dq~~na~~l~~~G~g~--------~~~---~~~~~~~~La~ai~~ll~d~  367 (402)
T 3ia7_A          299 RACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGS--------VLR---PDQLEPASIREAVERLAADS  367 (402)
T ss_dssp             EEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEE--------ECC---GGGCSHHHHHHHHHHHHHCH
T ss_pred             CEEEEECCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEE--------ECC---CCCCCHHHHHHHHHHHHCCH
T ss_conf             1366523556699999809998995598662999999999879889--------806---03699999999999997799


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             999999999999999838999989999999998619
Q gi|254780767|r  348 LQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVLG  383 (383)
Q Consensus       348 ~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~Lg  383 (383)
                      ++|+++.    +.++.+.... +.+++++.|.++++
T Consensus       368 ~~r~~~~----~~~~~~~~~~-~~~~~v~~ie~~l~  398 (402)
T 3ia7_A          368 AVRERVR----RMQRDILSSG-GPARAADEVEAYLG  398 (402)
T ss_dssp             HHHHHHH----HHHHHHHTSC-HHHHHHHHHHHHHH
T ss_pred             HHHHHHH----HHHHHHHCCC-CHHHHHHHHHHHHH
T ss_conf             9999999----9999987579-79999999999861


No 4  
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis}
Probab=99.65  E-value=1.3e-13  Score=108.30  Aligned_cols=337  Identities=15%  Similarity=0.141  Sum_probs=195.8

Q ss_pred             CCEEEEEEC-CCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             745999976-8214-78999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    3 SLKIAVIAG-EISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         3 ~mki~i~aG-E~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      +|||.|++= ..+| ..+...|.++|.++ +.++.+..-+.+.........+ ....+.+.. .......+........+
T Consensus        15 kMKI~iv~~P~~GG~~~~~~~La~~L~~~-Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l   91 (394)
T 2jjm_A           15 KLKIGITCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRLNKVYPNI-YFHEVTVNQ-YSVFQYPPYDLALASKM   91 (394)
T ss_dssp             CCEEEEECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC----CCCTTE-EEECCCCC-----CCSCCHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCE-EEEEECCCC-CCCCCCCHHHHHHHHHH
T ss_conf             47799989999995999999999999977-9989999479986521137970-699704666-65001461369999999


Q ss_pred             HHHCCCCCCCEEEEECH--HHHHHHHHHHHHHHCCCCCCEEEEC---CCCCCCCCCCH---HHHHHHHHHHCCCCCCCHH
Q ss_conf             86100128886898511--7765799998663013463111100---22110036635---5799999864015677422
Q gi|254780767|r   81 VELIVSSKPDVLLIVDN--PDFTHRVAKRVRKKMPNLPIINYVC---PSVWAWREGRA---RKMCAYINQVISILPFEKE  152 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~--pgFnl~lak~lkk~~~~ipvi~yv~---PqvWAWr~~R~---k~~~~~~d~~~~ifpFE~~  152 (383)
                      .+.+...+||++..-+.  ..+...++++...  .++|+++.+-   +..|.+..+..   ...-+..|.+.++-....+
T Consensus        92 ~~~~~~~~~Dii~~~~~~~~~~~~~l~~~~~~--~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  169 (394)
T 2jjm_A           92 AEVAQRENLDILHVHYAIPHAICAYLAKQMIG--ERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIN  169 (394)
T ss_dssp             HHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT--TCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred             HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf             99998749968998887707999999998539--9972999957864111111077999999999748899992488999


Q ss_pred             HHHCCC--CCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEE
Q ss_conf             320025--531476388211221001355888976187655650599853874301230511189998764027351262
Q gi|254780767|r  153 VMQRLG--GPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFS  230 (383)
Q Consensus       153 ~f~k~~--~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~  230 (383)
                      .+.+..  .-++..+.++.........+....+...++.+++++| ++.| |-.+ .+....+++++..+.+. ++..++
T Consensus       170 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~G-r~~~-~K~~~~li~a~~~~~~~-~~~~~~  245 (394)
T 2jjm_A          170 ETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKIL-IHIS-NFRK-VKRVQDVVQAFAKIVTE-VDAKLL  245 (394)
T ss_dssp             HHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEE-EEEC-CCCG-GGTHHHHHHHHHHHHHS-SCCEEE
T ss_pred             HHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEE-EEEE-ECCC-CCCHHHHHHHHHHHCCC-CCEEEE
T ss_conf             999961885668996676663235875678887751888667379-9875-0454-30045666677651123-311577


Q ss_pred             ECCCCCHHHHHHHHHHHCCCCCEEEE--ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEE
Q ss_conf             01663368899999960488850552--0552035788763552331-----1566888762753025405774100001
Q gi|254780767|r  231 LVTVSSQENLVRCIVSKWDISPEIII--DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFI  303 (383)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~  303 (383)
                      +.......+.++...++.+....+..  ..++..+.+..||+.+..|     |++.+|++.+|+|. |+..++.+..++ 
T Consensus       246 i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~EAma~G~Pv-I~s~~gg~~e~v-  323 (394)
T 2jjm_A          246 LVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPC-IGTRVGGIPEVI-  323 (394)
T ss_dssp             EECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCE-EEECCTTSTTTC-
T ss_pred             EECCCCCCCCCCCCHHCCCCCCCEEECCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCE-EEECCCCHHHHH-
T ss_conf             523885110111100014766530103541210002333202467631101114779998559838-992799869985-


Q ss_pred             ECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHCC
Q ss_conf             02467610230244078426124205489899999999984498999999999999-9998389
Q gi|254780767|r  304 FYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFEN-LWDRMNT  366 (383)
Q Consensus       304 ~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~-~~~~Lg~  366 (383)
                         .-...|+        ++     +.-+++.+++++.++++|++.++++.++..+ +.+....
T Consensus       324 ---~~~~~G~--------l~-----~~~d~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~  371 (394)
T 2jjm_A          324 ---QHGDTGY--------LC-----EVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRS  371 (394)
T ss_dssp             ---CBTTTEE--------EE-----CTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCH
T ss_pred             ---CCCCEEE--------EE-----CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
T ss_conf             ---0797189--------97-----799999999999999769999999999999999986899


No 5  
>3iaa_A CALG2; glycosyltransferase, calicheamicin, TDP, enediyne, TR; HET: TYD; 2.50A {Micromonospora echinospora}
Probab=99.63  E-value=1.6e-12  Score=101.08  Aligned_cols=340  Identities=12%  Similarity=0.133  Sum_probs=183.2

Q ss_pred             CC-EEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEE-C-----HH-----HCCEEEHHHHH
Q ss_conf             74-5999976821478999-99999997389983999971--7899947880650-4-----44-----53110136746
Q gi|254780767|r    3 SL-KIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLF-D-----FS-----ELSVIGIMQVV   67 (383)
Q Consensus         3 ~m-ki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~-~-----~~-----~l~v~G~~evl   67 (383)
                      +| ||++++...-||+.-. .|.++|.++ +.++.+..-.  -+.+++.|++..- +     ..     ...-.+.....
T Consensus        19 ~m~~il~~~~~~~GH~~p~l~la~~L~~r-GH~V~v~t~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (416)
T 3iaa_A           19 HMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHL   97 (416)
T ss_dssp             -CCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCEEEECCCSGGGCCHHHHHHSCSSCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCCCHHHHH
T ss_conf             99808997799563799999999999978-89899996823677898679879972776565330110365431134689


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHH-HHHHHHHHHHCCCCCCEEEECCCCCCC----------------CC
Q ss_conf             6459999999999861001288868985117765-799998663013463111100221100----------------36
Q gi|254780767|r   68 RHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFT-HRVAKRVRKKMPNLPIINYVCPSVWAW----------------RE  130 (383)
Q Consensus        68 ~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFn-l~lak~lkk~~~~ipvi~yv~PqvWAW----------------r~  130 (383)
                      ..+........++.+.+...+||+++.-.++..- ..+|...     ++|.+..... .+.+                ..
T Consensus        98 ~~~~~~~~~~~~l~~~i~~~~pDvv~~~~~~~~~~~~~a~~~-----~~p~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~  171 (416)
T 3iaa_A           98 MYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARW-----RRPAVRLSAA-FASNEHYSFSQDMVTLAGTIDP  171 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCSEEEEESTTHHHHHHHHHHH-----TCCEEEEESS-CCCCSSCCHHHHHHHHHTCCCG
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC-----CCCEEEEECC-CCCCCCCCCCCCCCCCCCCCCH
T ss_conf             999999999999999972689818998264302688999970-----8986998145-3211111234210122344662


Q ss_pred             CCHHHHHHHHHHHCC---------------------CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf             635579999986401---------------------56774223200255314763882112210013558889761876
Q gi|254780767|r  131 GRARKMCAYINQVIS---------------------ILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTP  189 (383)
Q Consensus       131 ~R~k~~~~~~d~~~~---------------------ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~  189 (383)
                      .+.+.+...++.+..                     ..+-+-+.....-..++.++|.++.+....       .......
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~  244 (416)
T 3iaa_A          172 LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFL-------GEWTRPA  244 (416)
T ss_dssp             GGCHHHHHHHHHHHHHTTCCSCHHHHHTCCCSCEEESSCTTTSTTGGGCCTTEEECCCCCCCCGGG-------CCCCCCS
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCC-------HHHHHCC
T ss_conf             343779999999999829983157776311101225799887577334687568704767631135-------4344304


Q ss_pred             CCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             55650599853874301230511189998764027351262016633688999999604888505520552035788763
Q gi|254780767|r  190 SQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCN  269 (383)
Q Consensus       190 ~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd  269 (383)
                      ++.++|.+..|+..+.....+   ..+++.+.+.  +..+++........   ........+..+ ...-.....+..|+
T Consensus       245 ~~~~~v~v~~g~~~~~~~~~~---~~~~~al~~~--~~~~~~~~~~~~~~---~~~~~l~~~v~~-~~~~p~~~~~~~~~  315 (416)
T 3iaa_A          245 DDLPVVLVSLGTTFNDRPGFF---RDCARAFDGQ--PWHVVMTLGGQVDP---AALGDLPPNVEA-HRWVPHVKVLEQAT  315 (416)
T ss_dssp             SCCCEEEEECCSSSCCCHHHH---HHHHHHTTTS--SCEEEEECCSSSCG---GGGCCCCTTEEE-ESCCCHHHHHHHEE
T ss_pred             CCCCEEEEECCCCCCCCHHHH---HHHHHHHHHC--CCEEEEEECCCCCH---HHHHCCCCCEEE-EEECCCCCCCCCCC
T ss_conf             688479997784234679999---9999999857--98799995898775---666238997899-74236322232442


Q ss_pred             HHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHH
Q ss_conf             55233115668-88762753025405774100001024676102302440784261242054898999999999844989
Q gi|254780767|r  270 AAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTL  348 (383)
Q Consensus       270 ~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~  348 (383)
                      ++++.+|..|+ |++.+|+|+|++- ...=.......+.-.-.|+        .++   ++++|++.|++++.++|+|++
T Consensus       316 ~~i~~gg~~t~~Eala~G~P~v~~p-~~~dq~~~a~~i~~~g~G~--------~l~---~~~~t~~~L~~al~~lL~dp~  383 (416)
T 3iaa_A          316 VCVTHGGMGTLMEALYWGRPLVVVP-QSFDVQPMARRVDQLGLGA--------VLP---GEKADGDTLLAAVGAVAADPA  383 (416)
T ss_dssp             EEEESCCHHHHHHHHHTTCCEEECC-CSGGGHHHHHHHHHTTSEE--------ECC---GGGCCHHHHHHHHHHHHSCHH
T ss_pred             EEEEECCCCCHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHCCCEE--------ECC---CCCCCHHHHHHHHHHHHCCHH
T ss_conf             3575156684999999499999935-7253899999999879889--------826---057999999999999977999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             9999999999999983899998999999999861
Q gi|254780767|r  349 QRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       349 ~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~L  382 (383)
                      +|+++.+    ..+++.... +.+++++.|.++|
T Consensus       384 ~r~~~~~----~~~~~~~~~-~~~~~a~~iE~~l  412 (416)
T 3iaa_A          384 LLARVEA----MRGHVRRAG-GAARAADAVEAYL  412 (416)
T ss_dssp             HHHHHHH----HHHHHHHTC-HHHHHHHHHHHHH
T ss_pred             HHHHHHH----HHHHHHCCC-HHHHHHHHHHHHH
T ss_conf             9999999----999986589-2999999999999


No 6  
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.60  E-value=5.5e-13  Score=104.22  Aligned_cols=337  Identities=14%  Similarity=0.118  Sum_probs=196.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH--HHHC-----CCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             4599997682147899999999997389983999-971789--9947-----8806504445311013674664599999
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS--LQKE-----GLVSLFDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~--m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      |||++++|--+-=..-+.|+++|++.  +++++. -++|.+  |...     |...-+   ++++..-.+-+.  ..+.+
T Consensus         1 mKi~~v~GtR~e~~kl~pli~~l~~~--~~~~~~li~tG~H~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~--~~~~~   73 (384)
T 1vgv_A            1 MKVLTVFGTRPEAIKMAPLVHALAKD--PFFEAKVCVTAQHREMLDQVLKLFSIVPDY---DLNIMQPGQGLT--EITCR   73 (384)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHHHHHS--TTCEEEEEECCSSGGGGHHHHHHHTCCCSE---ECCCCSTTSCHH--HHHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHHHHCCCCCCC---CCCCCCCCCCHH--HHHHH
T ss_conf             93999997347199999999999738--998889999389889999999862978774---524688999999--99999


Q ss_pred             HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC----CCC-CCCCCCCHHHHHHHHHHHCCC-CCC
Q ss_conf             99999861001288868985117765799998663013463111100----221-100366355799999864015-677
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC----PSV-WAWREGRARKMCAYINQVISI-LPF  149 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~----Pqv-WAWr~~R~k~~~~~~d~~~~i-fpF  149 (383)
                      ....+-+.+.+.+||+|+...-..-.+..|-.+..  .+||++|+-+    -.+ |.|-+..   .+..+|++.-+ |.-
T Consensus        74 ~i~~~~~~l~~~kpD~v~v~GDr~e~la~a~aa~~--~~Ipi~HiegG~~s~~~~~~~~de~---~R~~i~klS~lhf~~  148 (384)
T 1vgv_A           74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFY--QRIPVGHVEAGLRTGDLYSPWPEEA---NRTLTGHLAMYHFSP  148 (384)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT--TTCCEEEESCCCCCSCTTSSTTHHH---HHHHHHTTCSEEEES
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCHHHH---HHCCCCCCCEEEEEC
T ss_conf             99999999985599989996898437669999997--5997899841445678777880676---530113212388743


Q ss_pred             CHHHHH---CC--CCCCEEECCCCCCCCCCCCC----CHHHHH----HHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHH
Q ss_conf             422320---02--55314763882112210013----558889----761876556505998538743012305111899
Q gi|254780767|r  150 EKEVMQ---RL--GGPPTTFVGHPLSSSPSILE----VYSQRN----KQRNTPSQWKKILLLPGSRAQEIYKILPFFESA  216 (383)
Q Consensus       150 E~~~f~---k~--~~~~~~fVGHPl~d~~~~~~----~~~~~~----~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~  216 (383)
                      -+++.+   +.  ..-++..||+|..|.+....    ......    .............++...|.......+..+.++
T Consensus       149 ~~~~~~rL~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~t~h~~~~~~~~~~~i~~~  228 (384)
T 1vgv_A          149 TETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHA  228 (384)
T ss_dssp             SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf             58999999871878543400166524367665443015267788762023221367876997346532220329999999


Q ss_pred             HHHHHHCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEE
Q ss_conf             98764027351262016633688--99999960488850552----0552035788763552331156688876275302
Q gi|254780767|r  217 VASLVKRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVV  290 (383)
Q Consensus       217 ~~~l~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~I  290 (383)
                      +..+.+.+.++.++.|..+....  ........   ..++..    ...+...++..|++.++-||+.-.|++.+|+|+|
T Consensus       229 l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~---~~ni~~~~~l~~~~~l~ll~~a~~vIgnSssgi~EA~~lg~P~I  305 (384)
T 1vgv_A          229 LADIATTHQDIQIVYPVHLNPNVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVL  305 (384)
T ss_dssp             HHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEEEESSSTGGGTGGGGTCCEE
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC---CCCCEECCCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEE
T ss_conf             999876466706985348985301456777514---44431037855899999985156999468418888987299789


Q ss_pred             EE-CCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             54-05774100001024676102302440784261242054898999999999844989999999999999998389999
Q gi|254780767|r  291 SI-YKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKP  369 (383)
Q Consensus       291 V~-Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~  369 (383)
                      ++ ..+-+-.     .+....+-+               -..+++.|.+++.++++|+..++.+.    +...-.| .|.
T Consensus       306 nir~~ter~~-----~~~~~~~i~---------------v~~~~~~I~~ai~~~l~~~~~~~~~~----~~~npYG-dG~  360 (384)
T 1vgv_A          306 VMRDTTERPE-----AVTAGTVRL---------------VGTDKQRIVEEVTRLLKDENEYQAMS----RAHNPYG-DGQ  360 (384)
T ss_dssp             EESSCCSCHH-----HHHHTSEEE---------------ECSSHHHHHHHHHHHHHCHHHHHHHH----SSCCTTC-CSC
T ss_pred             ECCCCCCCHH-----HHHCCEEEE---------------CCCCHHHHHHHHHHHHHCHHHHHHCC----CCCCCCC-CCH
T ss_conf             7778766711-----443680598---------------68999999999999970978775414----4789898-985


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999998
Q gi|254780767|r  370 AGHMAAEIVLQ  380 (383)
Q Consensus       370 a~~~AA~~I~~  380 (383)
                      ++++..+++.+
T Consensus       361 as~rIv~~Lk~  371 (384)
T 1vgv_A          361 ACSRILEALKN  371 (384)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999983


No 7  
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A*
Probab=99.57  E-value=3.7e-14  Score=111.98  Aligned_cols=328  Identities=15%  Similarity=0.163  Sum_probs=180.2

Q ss_pred             CCCEEEEEEC----CCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEE-ECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             8745999976----8214-7899999999997389983999971789994788065-04445311013674664599999
Q gi|254780767|r    2 NSLKIAVIAG----EISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSL-FDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         2 ~~mki~i~aG----E~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~-~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      ++|||.|++=    ...| ..|...|.++|+++ +.++.++.-+.+.-.......- ...-.+...   ..+..+.....
T Consensus        19 ~~MkI~iv~~~~~p~~GG~~~~i~~La~~L~~~-GheV~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   94 (406)
T 2gek_A           19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGGKAVPIPYN---GSVARLRFGPA   94 (406)
T ss_dssp             --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECCCCC---------------CCHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCEEECCCEEEECCCC---CCHHHHHCCHH
T ss_conf             998899989987899987999999999999977-99899994289987776303227369981567---63233203599


Q ss_pred             HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC---CCCCCCCC--CCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999861001288868985117765799998663013463111100---22110036--63557999998640156774
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC---PSVWAWRE--GRARKMCAYINQVISILPFE  150 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~---PqvWAWr~--~R~k~~~~~~d~~~~ifpFE  150 (383)
                      ....+.+.+.+.++|++..-+... ..-.....++  .++|+++.+-   +..|.++.  +....+.+..+..++.-...
T Consensus        95 ~~~~l~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~  171 (406)
T 2gek_A           95 THRKVKKWIAEGDFDVLHIHEPNA-PSLSMLALQA--AEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLA  171 (406)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECCCS-SSHHHHHHHH--EESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHH
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHH--CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECHHH
T ss_conf             999999999974999899927736-8899999986--6998899977766440137899999999997478699908899


Q ss_pred             HHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEE
Q ss_conf             22320025531476388211221001355888976187655650599853874301230511189998764027351262
Q gi|254780767|r  151 KEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFS  230 (383)
Q Consensus       151 ~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~  230 (383)
                      .+++.+....++..+-|++-... .    .......+.+...+.| ++-| |..+-++.+..+++++..+.+..|+++++
T Consensus       172 ~~~~~~~~~~~~~~ip~gvd~~~-~----~~~~~~~~~~~~~~~i-l~vG-r~~~~~k~~~~~i~a~~~l~~~~~~~~l~  244 (406)
T 2gek_A          172 RRWQMEALGSDAVEIPNGVDVAS-F----ADAPLLDGYPREGRTV-LFLG-RYDEPRKGMAVLLAALPKLVARFPDVEIL  244 (406)
T ss_dssp             HHHHHHHHSSCEEECCCCBCHHH-H----HTCCCCTTCSCSSCEE-EEES-CTTSGGGCHHHHHHHHHHHHTTSTTCEEE
T ss_pred             HHHHHHHCCCCEEEECCCCCCCC-C----CCHHHHHCCCCCCCEE-EEEC-CCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             99998755899799789736200-0----0011110167668889-9973-55656653188999888887538884112


Q ss_pred             ECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCC------HHHHHHHHHHCCCEEEECCCCCCEEEE
Q ss_conf             0166336889999996048885055--20552035788763552331------156688876275302540577410000
Q gi|254780767|r  231 LVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAAS------GTVILELALCGIPVVSIYKSEWIVNFF  302 (383)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~S------GTaTLE~al~g~P~IV~Yk~~~lt~~i  302 (383)
                      +......... .....+......+.  ...++..+.++.||+.+..|      |.+.+|++.+|+|.|+ ..++.     
T Consensus       245 i~G~~~~~~~-~~~~~~l~~~v~~~g~~~~~~~~~~l~~adv~v~ps~~~E~~~~~~lEAma~G~PvI~-s~~gg-----  317 (406)
T 2gek_A          245 IVGRGDEDEL-REQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVA-SDLDA-----  317 (406)
T ss_dssp             EESCSCHHHH-HHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEE-CCCHH-----
T ss_pred             ECCCCCCCCC-CCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE-ECCCC-----
T ss_conf             3158853332-1001355543899223232067777640333346652345685899999977997999-46998-----


Q ss_pred             EECCCCCCEEEEHHHCCCC---CCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             1024676102302440784---26124205489899999999984498999999999999999838
Q gi|254780767|r  303 IFYIKTWTCALPNLIVDYP---LVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMN  365 (383)
Q Consensus       303 ~~lik~~~i~LpNii~~~~---ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg  365 (383)
                                ++.++.+..   ++|     .-+++.+++++..+++|++.++++.++..+..++..
T Consensus       318 ----------~~e~v~~~~~G~l~~-----~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~fs  368 (406)
T 2gek_A          318 ----------FRRVLADGDAGRLVP-----VDDADGMAAALIGILEDDQLRAGYVARASERVHRYD  368 (406)
T ss_dssp             ----------HHHHHTTTTSSEECC-----TTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGB
T ss_pred             ----------HHHHHCCCCEEEEEC-----CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf             ----------699851797499977-----999999999999997699999999999999999699


No 8  
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.57  E-value=1.1e-11  Score=95.64  Aligned_cols=343  Identities=12%  Similarity=0.103  Sum_probs=177.9

Q ss_pred             CCCCEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEE-C----HHHCCE----EEHHHHHH
Q ss_conf             98745999976821478999-99999997389983999971--7899947880650-4----445311----01367466
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLF-D----FSELSV----IGIMQVVR   68 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~-~----~~~l~v----~G~~evl~   68 (383)
                      +++.+|++++....||+... .|.++|+++ +.++.|.+-.  .+..++.|++..- +    ......    .+....+.
T Consensus        10 ~~~~~ilf~~~p~~GHv~p~l~la~~L~~r-GH~V~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (424)
T 2iya_A           10 VTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMG   88 (424)
T ss_dssp             -CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             999849997787163799999999999988-8989999684167778766982574077665222321125145789999


Q ss_pred             H-HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC---------CCCCCCCCC-------
Q ss_conf             4-59999999999861001288868985117765799998663013463111100---------221100366-------
Q gi|254780767|r   69 H-LPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC---------PSVWAWREG-------  131 (383)
Q Consensus        69 ~-~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~---------PqvWAWr~~-------  131 (383)
                      . ...+......+.+.+++.+||+||.-++......+|+.+     ++|++....         +.++.|...       
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~pDvvi~~~~~~~~~~~a~~~-----~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (424)
T 2iya_A           89 LFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKW-----DIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEE  163 (424)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHH-----TCCEEEEESSCCCCTTHHHHSGGGSCCCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-----CCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf             99999999999999998355996898255455999999983-----6985999525420222002454334544333332


Q ss_pred             ---------------CHHHHHHHHHH-----------------------HCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
Q ss_conf             ---------------35579999986-----------------------4015677422320025531476388211221
Q gi|254780767|r  132 ---------------RARKMCAYINQ-----------------------VISILPFEKEVMQRLGGPPTTFVGHPLSSSP  173 (383)
Q Consensus       132 ---------------R~k~~~~~~d~-----------------------~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~  173 (383)
                                     ....+.+..+.                       .+...|.+-++.....+..+.++|....+. 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (424)
T 2iya_A          164 AAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYGDR-  242 (424)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECCCCCCCC-
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCHHHCCCCCCCCCCEEECCCCCCCC-
T ss_conf             1232222210244455677888899999999980888752766515752686177664476423687555336656653-


Q ss_pred             CCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCE
Q ss_conf             00135588897618765565059985387430123051118999876402735126201663368899999960488850
Q gi|254780767|r  174 SILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPE  253 (383)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (383)
                            .......+..+..+.|.+..|+...--...+..+.++..   +.  +.+++.........   ........+..
T Consensus       243 ------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~---~~~~~~~~~v~  308 (424)
T 2iya_A          243 ------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD---GL--DWHVVLSVGRFVDP---ADLGEVPPNVE  308 (424)
T ss_dssp             ------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHT---TC--SSEEEEECCTTSCG---GGGCSCCTTEE
T ss_pred             ------CCHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH---HC--CEEEEEEECCCCCH---HHHHCCCCCEE
T ss_conf             ------320333322588857996477545570999999998876---24--60799971788875---67602899789


Q ss_pred             EEEECCCCHHHHHHHHHHHCCCHHH-HHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCC
Q ss_conf             5520552035788763552331156-688876275302540577410000102467610230244078426124205489
Q gi|254780767|r  254 IIIDKEQKKQVFMTCNAAMAASGTV-ILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIR  332 (383)
Q Consensus       254 i~~~~~~~~~~l~~sd~ai~~SGTa-TLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~  332 (383)
                      + ...-...+++..++++++.+|.. ++|++.+|+|+|++-- ..=.......+.-.-+|       .    .+-++++|
T Consensus       309 ~-~~~~p~~~~~~~~~~~i~hgG~~t~~Eal~~G~P~v~~P~-~~dQ~~na~~l~~~G~G-------~----~l~~~~~~  375 (424)
T 2iya_A          309 V-HQWVPQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQ-IAEQTMNAERIVELGLG-------R----HIPRDQVT  375 (424)
T ss_dssp             E-ESSCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCC-SHHHHHHHHHHHHTTSE-------E----ECCGGGCC
T ss_pred             E-EECCCHHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEECC-CCHHHHHHHHHHHCCCE-------E----EECCCCCC
T ss_conf             9-6115757641254136750566769999981999998076-01499999999987988-------9----90504699


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             89999999998449899999999999999983899998999999999861
Q gi|254780767|r  333 SEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       333 ~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~L  382 (383)
                      ++.+++++.++++|+.+|+++.    ++.+++...+ +.++|+++|.++|
T Consensus       376 ~~~l~~al~~ll~d~~~r~~~~----~~~~~~~~~~-~~~~a~~~iE~~l  420 (424)
T 2iya_A          376 AEKLREAVLAVASDPGVAERLA----AVRQEIREAG-GARAAADILEGIL  420 (424)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHH----HHHHHHHTSC-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCHHHHHHHH----HHHHHHHCCC-CHHHHHHHHHHHH
T ss_conf             9999999999977999999999----9999876238-3999999999999


No 9  
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.55  E-value=5.4e-13  Score=104.29  Aligned_cols=342  Identities=13%  Similarity=0.122  Sum_probs=195.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH--HHHC-----CCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf             9874599997682147899999999997389983999-971789--9947-----8806504445311013674664599
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS--LQKE-----GLVSLFDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~--m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~   72 (383)
                      +++|||++++|--.-=..-+.|+++|++. +.++++. -+.|.+  |...     |+..-++   +.+.+-.+.+.  ..
T Consensus         6 ~~kmKI~~v~GtR~e~~kl~pli~~l~~~-~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~--~~   79 (375)
T 3beo_A            6 TERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQHRQMLDQVLSIFGITPDFD---LNIMKDRQTLI--DI   79 (375)
T ss_dssp             SSCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSSSHHHHHHHHHHTCCCSEE---CCCCCTTCCHH--HH
T ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHHHHC-CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEE---EECCCCCCCHH--HH
T ss_conf             65854999996447399999999999847-67887799994797899999999809998801---23588997899--99


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC--CCCCCCCCCCHHHHHHHHHHHCCC-CCC
Q ss_conf             99999999861001288868985117765799998663013463111100--221100366355799999864015-677
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC--PSVWAWREGRARKMCAYINQVISI-LPF  149 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~--PqvWAWr~~R~k~~~~~~d~~~~i-fpF  149 (383)
                      +-+....+-+.+.+.+||+|+...-..-.+-.|-.+..  .+||++|.-+  .+.+++...-=...+..+|++.-+ |+-
T Consensus        80 ~~~~~~~~~~~~~~~kpD~vlv~GDr~e~la~a~aa~~--~~ipi~HiegG~rs~~~~~~~~de~~R~~isklS~ihf~~  157 (375)
T 3beo_A           80 TTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY--NQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSP  157 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH--TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEES
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEECC
T ss_conf             99999999999974799889994687247779999998--1983899624765477667877788763047543262058


Q ss_pred             CHHHHHCC--CC---CCEEECCCCCCCCCCCCCCH---HHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHH
Q ss_conf             42232002--55---31476388211221001355---888976187655650599853874301230511189998764
Q gi|254780767|r  150 EKEVMQRL--GG---PPTTFVGHPLSSSPSILEVY---SQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLV  221 (383)
Q Consensus       150 E~~~f~k~--~~---~~~~fVGHPl~d~~~~~~~~---~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~  221 (383)
                      -++..++.  .|   -++..||+|..|.+......   .....  .+. +++ ..|+-.-|.......+..++.++..+.
T Consensus       158 ~e~~~~rL~~~Ge~~~~If~vG~~~iD~i~~~~~~~~~~~~~~--~~~-~~~-~iLvt~Hr~~n~~~~~~~~~~~~~~~~  233 (375)
T 3beo_A          158 TAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLE--KLG-NNR-LVLMTAHRRENLGEPMRNMFRAIKRLV  233 (375)
T ss_dssp             SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHH--TTT-TSE-EEEEECCCGGGTTHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHH--HCC-CCC-EEEEECCCCHHHCCHHHHHHHHHHHHH
T ss_conf             5899999987588875488706079999999898864054667--516-686-899976862110025899999999888


Q ss_pred             HCCCCCEEEECCCCCHHHH--HHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC-
Q ss_conf             0273512620166336889--9999960488850552----05520357887635523311566888762753025405-
Q gi|254780767|r  222 KRNPFFRFSLVTVSSQENL--VRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYK-  294 (383)
Q Consensus       222 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk-  294 (383)
                      ....+..++.|..+.....  ......+.   .++..    ...+...+++.|+++++-||+.-.|++.+|+|+|++-. 
T Consensus       234 ~~~~~~~ii~p~~~~~~~~~~~~~~~~~~---~~i~~~~~l~~~~fl~ll~~s~~vignSss~i~Ea~~lg~P~Inlr~~  310 (375)
T 3beo_A          234 DKHEDVQVVYPVHMNPVVRETANDILGDY---GRIHLIEPLDVIDFHNVAARSYLMLTDSGGVQEEAPSLGVPVLVLRDT  310 (375)
T ss_dssp             HHCTTEEEEEECCSCHHHHHHHHHHHTTC---TTEEEECCCCHHHHHHHHHTCSEEEECCHHHHHHHHHHTCCEEECSSC
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHHHHCCC---CCCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHCCCEEEECCC
T ss_conf             75458439973587511456666653146---642002677789887777652168834544788799709988980787


Q ss_pred             CCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             77410000102467610230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r  295 SEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA  374 (383)
Q Consensus       295 ~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A  374 (383)
                      +.|-...     .          .|.-+.     ...+.+.|..++.++++|+..++++.    +...-.|. |.|+++-
T Consensus       311 teRq~g~-----~----------~g~~il-----~~~~~~~I~~~i~~~l~~~~~~~~~~----~~~npYGd-G~as~rI  365 (375)
T 3beo_A          311 TERPEGI-----E----------AGTLKL-----AGTDEETIFSLADELLSDKEAHDKMS----KASNPYGD-GRASERI  365 (375)
T ss_dssp             CSCHHHH-----H----------TTSEEE-----CCSCHHHHHHHHHHHHHCHHHHHHHC----CCCCTTCC-SCHHHHH
T ss_pred             CCCHHHH-----H----------CCCEEE-----CCCCHHHHHHHHHHHHHCHHHHHHCC----CCCCCCCC-CHHHHHH
T ss_conf             7577478-----5----------490598-----68999999999999973978775303----58898989-7299999


Q ss_pred             HHHHHHHC
Q ss_conf             99999861
Q gi|254780767|r  375 AEIVLQVL  382 (383)
Q Consensus       375 A~~I~~~L  382 (383)
                      .++|.+.+
T Consensus       366 v~~L~k~~  373 (375)
T 3beo_A          366 VEAILKHF  373 (375)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
T ss_conf             99999873


No 10 
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.55  E-value=1.1e-12  Score=102.33  Aligned_cols=342  Identities=13%  Similarity=0.096  Sum_probs=199.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH-------HHHCCCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf             9874599997682147899999999997389983999-971789-------99478806504445311013674664599
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS-------LQKEGLVSLFDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~-------m~~~G~~~~~~~~~l~v~G~~evl~~~~~   72 (383)
                      |.+|||++++|--.-=..-+.|+++|++. +.+++.. -+.|.+       .+..|++.-++   ++++.-.+.+.  -.
T Consensus        25 M~kmKIl~v~GTRpe~ikl~pli~~l~~~-~~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~---l~i~~~~~~~~--~~   98 (403)
T 3ot5_A           25 MAKIKVMSIFGTRPEAIKMAPLVLALEKE-PETFESTVVITAQHREMLDQVLEIFDIKPDID---LDIMKKGQTLA--EI   98 (403)
T ss_dssp             -CCEEEEEEECSHHHHHHHHHHHHHHHTC-TTTEEEEEEECC-----CHHHHHHTTCCCSEE---CCCCC-CCCHH--HH
T ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCHHHHHHHHHHCCCCCCEE---EECCCCCCCHH--HH
T ss_conf             86855999997368499999999999838-88888799990799789999998619998833---43488999999--99


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEEC-CCCCCCCCCCH-HHHHHHHHHHCCC-C
Q ss_conf             99999999861001288868985--117765799998663013463111100-22110036635-5799999864015-6
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVC-PSVWAWREGRA-RKMCAYINQVISI-L  147 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~-PqvWAWr~~R~-k~~~~~~d~~~~i-f  147 (383)
                      +-+.+..+-+.+.+.+||+|+..  .+--+---+|.+    ..+||++|.-+ -.-|-|.++-. ...+..+|++..+ |
T Consensus        99 ~~~~i~~~~~~~~~~kPD~vlV~GDr~~~la~alaa~----~~~Ipi~HiegG~rs~~~~~~~peE~~R~~i~kls~~hf  174 (403)
T 3ot5_A           99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATF----YQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHF  174 (403)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHH----HTTCEEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEE
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH----HHCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEE
T ss_conf             9999999999999739999999688804899999999----819978999646656776789807876412463005998


Q ss_pred             CCCHHHHHCC--CCC---CEEECCCCCCCCCCCCCCHHHH-HHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHH
Q ss_conf             7742232002--553---1476388211221001355888-976187655650599853874301230511189998764
Q gi|254780767|r  148 PFEKEVMQRL--GGP---PTTFVGHPLSSSPSILEVYSQR-NKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLV  221 (383)
Q Consensus       148 pFE~~~f~k~--~~~---~~~fVGHPl~d~~~~~~~~~~~-~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~  221 (383)
                      +--+...++.  .|.   ++..||+|..|.+......... .....+.  ++...++---|...+...+..+.+++..+.
T Consensus       175 ~~t~~~~~~L~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~--~~~~ilvt~Hr~en~~~~~~~~~~~~~~~~  252 (403)
T 3ot5_A          175 SPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLG--DNRLILMTAHRRENLGEPMQGMFEAVREIV  252 (403)
T ss_dssp             ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCT--TCEEEEECCCCHHHHTTHHHHHHHHHHHHH
T ss_pred             EECHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCC--CCCEEEEECCCCHHCCCHHHHHHHHHHHHH
T ss_conf             502787768875289966089968850888998787755073545345--685799985652220361678889988887


Q ss_pred             HCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEE-CC
Q ss_conf             027351262016633688--99999960488850552----055203578876355233115668887627530254-05
Q gi|254780767|r  222 KRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSI-YK  294 (383)
Q Consensus       222 ~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~-Yk  294 (383)
                      +..++..+++|..+....  ........   ..++.+    ...+...+++.|+++++=||+.-.|++.+|+|+|++ -.
T Consensus       253 ~~~~~~~ii~p~~~~~~~~~~~~~~~~~---~~ni~~i~~l~~~~fl~ll~~a~~vIgdSss~~~EA~~lg~P~Inir~~  329 (403)
T 3ot5_A          253 ESREDTELVYPMHLNPAVREKAMAILGG---HERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDT  329 (403)
T ss_dssp             HHCTTEEEEEECCSCHHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHEEEEEECCHHHHHHGGGTTCCEEECCSS
T ss_pred             HHCCCEEEEEECCCCHHHHHHHHHHHCC---CCCCEECCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCEEEECCC
T ss_conf             5057248999547750221123333025---6410003772288899998642899966702777788609978980787


Q ss_pred             CCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             77410000102467610230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r  295 SEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA  374 (383)
Q Consensus       295 ~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A  374 (383)
                      +.+-...               -.|.-+.     ...+.+++..++.+++.++..+.++.    +...-.|. |.++++.
T Consensus       330 tERqeg~---------------~~g~~il-----v~~~~~~ii~~~~~~l~~~~~~~k~~----~~~npYGd-G~as~rI  384 (403)
T 3ot5_A          330 TERPEGI---------------EAGTLKL-----IGTNKENLIKEALDLLDNKESHDKMA----QAANPYGD-GFAANRI  384 (403)
T ss_dssp             CSCHHHH---------------HHTSEEE-----CCSCHHHHHHHHHHHHHCHHHHHHHH----HSCCTTCC-SCHHHHH
T ss_pred             CCCHHHH---------------HCCEEEE-----CCCCHHHHHHHHHHHHHCHHHHHHHC----CCCCCCCC-CHHHHHH
T ss_conf             7687368---------------5481599-----58999999999999985968776412----37899989-8699999


Q ss_pred             HHHHHHHC
Q ss_conf             99999861
Q gi|254780767|r  375 AEIVLQVL  382 (383)
Q Consensus       375 A~~I~~~L  382 (383)
                      .++|.+++
T Consensus       385 v~iL~~~~  392 (403)
T 3ot5_A          385 LAAIKSHF  392 (403)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999861


No 11 
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.49  E-value=2.1e-11  Score=93.79  Aligned_cols=337  Identities=14%  Similarity=0.117  Sum_probs=179.8

Q ss_pred             CCCEEEEEECC-----CC--HH-----HHHHHHHHHHHHHCCCCEEEEEECCHHHHHC------CCEEEECHHH--CCEE
Q ss_conf             87459999768-----21--47-----8999999999973899839999717899947------8806504445--3110
Q gi|254780767|r    2 NSLKIAVIAGE-----IS--GD-----LLAGDLIKSLKEMVSYPINLVGVGGPSLQKE------GLVSLFDFSE--LSVI   61 (383)
Q Consensus         2 ~~mki~i~aGE-----~S--GD-----~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~------G~~~~~~~~~--l~v~   61 (383)
                      ++|||.+++-.     .+  ||     .|-.+|.++|.++ +.++.++...-..-...      |++.+ .+..  ....
T Consensus        19 ~~~ri~~vs~~~~P~~~~g~~d~GG~e~~v~~La~~L~~~-Gh~V~v~t~~~~~~~~~~~~~~~~v~i~-~i~~~~~~~~   96 (438)
T 3c48_A           19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVI-NIAAGPYEGL   96 (438)
T ss_dssp             CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEE-EECCSCSSSC
T ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCEECCCCEEEE-EECCCCCCCC
T ss_conf             9977999846636300059998679999999999999977-9969999547888774402226971899-8057862335


Q ss_pred             EHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC---CCCCCCCC--CC----
Q ss_conf             1367466459999999999861001288868985117765799998663013463111100---22110036--63----
Q gi|254780767|r   62 GIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC---PSVWAWRE--GR----  132 (383)
Q Consensus        62 G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~---PqvWAWr~--~R----  132 (383)
                      ........+......+..... ....+||++..-+..  ....+..+++. .++|+++.+-   +....|..  +.    
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~Diih~~~~~--~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~  172 (438)
T 3c48_A           97 SKEELPTQLAAFTGGMLSFTR-REKVTYDLIHSHYWL--SGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESE  172 (438)
T ss_dssp             CGGGGGGGHHHHHHHHHHHHH-HHTCCCSEEEEEHHH--HHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-HHCCCCEEEEECCCH--HHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCHHHH
T ss_conf             477879999999999999999-707996199989843--78999999986-59988999256432233100013311478


Q ss_pred             -----HHHHHHHHHHHCCCCCCCHHHHHCCCCC---CEEECCCCCCCC-C--CCCCCHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf             -----5579999986401567742232002553---147638821122-1--0013558889761876556505998538
Q gi|254780767|r  133 -----ARKMCAYINQVISILPFEKEVMQRLGGP---PTTFVGHPLSSS-P--SILEVYSQRNKQRNTPSQWKKILLLPGS  201 (383)
Q Consensus       133 -----~k~~~~~~d~~~~ifpFE~~~f~k~~~~---~~~fVGHPl~d~-~--~~~~~~~~~~~~~~~~~~~~~I~llPGS  201 (383)
                           .+.+.+..|.+++.-....+.+.+..+.   ++..+.+..-.. .  .........+++.+++.+.. +.++.|+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~vi~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~Gr  251 (438)
T 3c48_A          173 ARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTK-VVAFVGR  251 (438)
T ss_dssp             HHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSE-EEEEESC
T ss_pred             HHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHCCCCCCCE-EEEEECC
T ss_conf             999999999863888999039999998874067755389977986755416554056799999709998985-9999702


Q ss_pred             CCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCC------HHHHHHHHHHHCCCCCEEEEE----CCCCHHHHHHHHHH
Q ss_conf             74301230511189998764027351262016633------688999999604888505520----55203578876355
Q gi|254780767|r  202 RAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSS------QENLVRCIVSKWDISPEIIID----KEQKKQVFMTCNAA  271 (383)
Q Consensus       202 R~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~~i~~~----~~~~~~~l~~sd~a  271 (383)
                       -.+ .+....+++++.++.++.|+.++.+.....      .........+.......+...    .++...++..||+.
T Consensus       252 -l~~-~Kg~~~li~a~~~l~~~~~~~~l~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~d~~  329 (438)
T 3c48_A          252 -LQP-FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIV  329 (438)
T ss_dssp             -BSG-GGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEE
T ss_pred             -CCC-CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCC
T ss_conf             -542-346268889999987507654311476247754320111022221234655431000357377787766530444


Q ss_pred             HCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             2331-----15668887627530254057741000010246761023024407842612420548989999999998449
Q gi|254780767|r  272 MAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQD  346 (383)
Q Consensus       272 i~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d  346 (383)
                      +..|     |++.+|++.+|+|. |+..++.+...+    .-...|+        ++     +.-+++.+++.+.++++|
T Consensus       330 v~~s~~E~~~~~~~Eama~G~PV-I~s~~gg~~e~i----~~~~~G~--------l~-----~~~d~~~la~~i~~ll~d  391 (438)
T 3c48_A          330 AVPSFNESFGLVAMEAQASGTPV-IAARVGGLPIAV----AEGETGL--------LV-----DGHSPHAWADALATLLDD  391 (438)
T ss_dssp             EECCSCCSSCHHHHHHHHTTCCE-EEESCTTHHHHS----CBTTTEE--------EE-----SSCCHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHCCCEE-EEECCCCCHHHH----CCCCEEE--------EE-----CCCCHHHHHHHHHHHHCC
T ss_conf             35632234137799998569729-995899717761----3797189--------97-----899999999999999869


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             8999999999999999838
Q gi|254780767|r  347 TLQRRAMLHGFENLWDRMN  365 (383)
Q Consensus       347 ~~~r~~~~~~~~~~~~~Lg  365 (383)
                      ++.++++.++..+..++..
T Consensus       392 ~~~~~~~~~~a~~~~~~fs  410 (438)
T 3c48_A          392 DETRIRMGEDAVEHARTFS  410 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999999699


No 12 
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xmp_A*
Probab=99.47  E-value=4.4e-11  Score=91.66  Aligned_cols=339  Identities=14%  Similarity=0.119  Sum_probs=179.1

Q ss_pred             CCCCEEEEEEC-CCCH--HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHH-----CC---EEEHHHHHHH
Q ss_conf             98745999976-8214--789999999999738998399997178999478806504445-----31---1013674664
Q gi|254780767|r    1 MNSLKIAVIAG-EISG--DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSE-----LS---VIGIMQVVRH   69 (383)
Q Consensus         1 m~~mki~i~aG-E~SG--D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~-----l~---v~G~~evl~~   69 (383)
                      |+.|||..+.. ...|  -.....|++.+++. +.++++.-+-|+.=       .|+.+.     +.   ...+.+-.+.
T Consensus        38 l~~mkVlhvn~t~~gGGva~~~~~lv~~~~~~-G~~~~~~V~~~~~~-------~f~vtk~~hn~lqg~~~~~~~~~~~~  109 (416)
T 2x6q_A           38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSI-GIEARWFVIEGPTE-------FFNVTKTFHNALQGNESLKLTEEMKE  109 (416)
T ss_dssp             TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHT-TCEEEEEECCCCHH-------HHHHHHHHHHHHTTCCSCCCCHHHHH
T ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-------HHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf             53998999967987775999999999999976-99569997079932-------77999988787528987677989999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEE-----CCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             5999999999986100128886898511776579999866301346311110-----02211003663557999998640
Q gi|254780767|r   70 LPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYV-----CPSVWAWREGRARKMCAYINQVI  144 (383)
Q Consensus        70 ~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv-----~PqvWAWr~~R~k~~~~~~d~~~  144 (383)
                        .+........+.+...++|+|+.=|...  +.+...+++   +.|++|..     .|+-..|+-  .+.+-+.+|.++
T Consensus       110 --~~~~~~~~~~~~~~~~~~DiVhiHd~~~--~~l~~~~~~---~~p~i~~~Hi~~~~~~~~~~~~--l~~~i~~~d~~I  180 (416)
T 2x6q_A          110 --LYLNVNRENSKFIDLSSFDYVLVHDPQP--AALIEFYEK---KSPWLWRCHIDLSSPNREFWEF--LRRFVEKYDRYI  180 (416)
T ss_dssp             --HHHHHHHHHHHSSCGGGSSEEEEESSTT--GGGGGGSCC---CSCEEEECCSCCSSCCHHHHHH--HHHHHTTSSEEE
T ss_pred             --HHHHHHHHHHHHHHCCCCCEEEEECCCH--HHHHHHHHC---CCCEEEEECCCCCCCHHHHHHH--HHHHHHHCCEEE
T ss_conf             --9999999999871136999899978755--899999843---8969999747888743999999--999998589999


Q ss_pred             CCCCCCHHHHHC-CCCCCEEECCCCC---CCCCC--CCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHH
Q ss_conf             156774223200-2553147638821---12210--01355888976187655650599853874301230511189998
Q gi|254780767|r  145 SILPFEKEVMQR-LGGPPTTFVGHPL---SSSPS--ILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVA  218 (383)
Q Consensus       145 ~ifpFE~~~f~k-~~~~~~~fVGHPl---~d~~~--~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~  218 (383)
                      +..   .+|.++ ...-++.++-|.+   .+...  ........++++++++++++|+ +.| |-.+ .+....+++++.
T Consensus       181 ~~~---~~~~~~~l~~~k~~vIpngID~~~~~n~~~~~~~~~~~~~~~~i~~~~~iil-~vG-r~~~-~Kg~~~li~a~~  254 (416)
T 2x6q_A          181 FHL---PEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIIT-QVS-RFDP-WKGIFDVIEIYR  254 (416)
T ss_dssp             ESS---GGGSCTTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEE-EEC-CCCT-TSCHHHHHHHHH
T ss_pred             EEC---HHHHHHHCCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEE-EEE-CCCH-HCCCHHHHHHHH
T ss_conf             965---9999721880358999389584011256899999999999809498991899-980-4703-118738999999


Q ss_pred             HHHHCCCCCEEEECCCCCH-----HHHHHHHHHHCCCCCE----EEE---ECCCCHHHHHHHHHHHCCC-----HHHHHH
Q ss_conf             7640273512620166336-----8899999960488850----552---0552035788763552331-----156688
Q gi|254780767|r  219 SLVKRNPFFRFSLVTVSSQ-----ENLVRCIVSKWDISPE----III---DKEQKKQVFMTCNAAMAAS-----GTVILE  281 (383)
Q Consensus       219 ~l~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~----i~~---~~~~~~~~l~~sd~ai~~S-----GTaTLE  281 (383)
                      .+.+++|++++++......     ....+..+.+......    +..   ..++...+++.||+.+..|     |.+.+|
T Consensus       255 ~l~~~~p~~~l~ivG~~~~~~~~~~~~~~~~l~~l~~~~~i~~~v~~~~~~~~~~~~~~~~adi~v~pS~~E~~~~~~lE  334 (416)
T 2x6q_A          255 KVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTE  334 (416)
T ss_dssp             HHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHH
T ss_pred             HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf             99986899679999527877806579999999999986698249998999989999999965223455555555427999


Q ss_pred             HHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH-HH
Q ss_conf             87627530254057741000010246761023024407842612420548989999999998449899999999999-99
Q gi|254780767|r  282 LALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFE-NL  360 (383)
Q Consensus       282 ~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~-~~  360 (383)
                      ++.+|+|.| +...+.+...+.    -...|+        ++     +  +++.+++.+..+++|++.++++.++.. .+
T Consensus       335 Ama~G~PvI-~s~~gg~~e~i~----~~~~G~--------l~-----~--d~~~la~~I~~ll~d~~~~~~~~~~ar~~v  394 (416)
T 2x6q_A          335 AMWKGKPVI-GRAVGGIKFQIV----DGETGF--------LV-----R--DANEAVEVVLYLLKHPEVSKEMGAKAKERV  394 (416)
T ss_dssp             HHHTTCCEE-EESCHHHHHHCC----BTTTEE--------EE-----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCEE-EECCCCHHHHHC----CCCEEE--------EC-----C--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             998699899-926997188850----797489--------81-----9--999999999999779999999999999999


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             99838999989999999998619
Q gi|254780767|r  361 WDRMNTKKPAGHMAAEIVLQVLG  383 (383)
Q Consensus       361 ~~~Lg~~~~a~~~AA~~I~~~Lg  383 (383)
                      .+....+..+ +.-.+++.++.|
T Consensus       395 ~~~fs~~~~~-~~~~~ly~~L~G  416 (416)
T 2x6q_A          395 RKNFIITKHM-ERYLDILNSLGG  416 (416)
T ss_dssp             HHHTBHHHHH-HHHHHHHHTC--
T ss_pred             HHHCCHHHHH-HHHHHHHHHCCC
T ss_conf             9868999999-999999987769


No 13 
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.43  E-value=6.9e-10  Score=83.76  Aligned_cols=341  Identities=14%  Similarity=0.109  Sum_probs=172.5

Q ss_pred             CCCEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECC--HHHHHCCCEEEECHHHCC-----EEEHH-----HHHH
Q ss_conf             8745999976821478999-999999973899839999717--899947880650444531-----10136-----7466
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGG--PSLQKEGLVSLFDFSELS-----VIGIM-----QVVR   68 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG--~~m~~~G~~~~~~~~~l~-----v~G~~-----evl~   68 (383)
                      ++++|.+.+-=..||+..+ .|.++|.++ +.++.|.+-..  +..++.|++...-...+.     ..+..     ....
T Consensus         6 ~~~hi~~~~~p~~GH~~p~l~la~~L~~~-GH~V~~~t~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (430)
T 2iyf_A            6 TPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEP   84 (430)
T ss_dssp             --CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99889996787450799999999999978-89899997821677788669878871677874323513456678999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC----------------
Q ss_conf             4599999999998610012888689851177657999986630134631111002211003663----------------
Q gi|254780767|r   69 HLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGR----------------  132 (383)
Q Consensus        69 ~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R----------------  132 (383)
                      .+....+...++.+.++..+||+||. |+..+...++.  ++  .++|++.+. |..+.|..-.                
T Consensus        85 ~~~~~~~~l~~l~~~~~~~~pD~vi~-~~~~~~~~~~a--~~--~~iP~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (430)
T 2iyf_A           85 FLNDAIQALPQLADAYADDIPDLVLH-DITSYPARVLA--RR--WGVPAVSLS-PNLVAWKGYEEEVAEPMWREPRQTER  158 (430)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSEEEE-ETTCHHHHHHH--HH--HTCCEEEEE-SSCCCCTTHHHHTHHHHHHHHHHSHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEE-CCCCHHHHHHH--HH--CCCCEEEEE-CCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99999999999999986049839997-57302699999--98--199989995-56555432331112332235304566


Q ss_pred             HH-HHHHHHHHH-CCCCCCCHHHHHCCCC-------------------CCEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
Q ss_conf             55-799999864-0156774223200255-------------------31476388211221001355888976187655
Q gi|254780767|r  133 AR-KMCAYINQV-ISILPFEKEVMQRLGG-------------------PPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQ  191 (383)
Q Consensus       133 ~k-~~~~~~d~~-~~ifpFE~~~f~k~~~-------------------~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~  191 (383)
                      .. .+.++.+.+ -...+...+.|....+                   ....|+|++..+....       ........+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  231 (430)
T 2iyf_A          159 GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAEE-------GGWQRPAGA  231 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC-----C-------CCCCCCTTC
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCC-------CCCCCCCCC
T ss_conf             6678999999988726874067775137743886230126675557887522146666553211-------001111477


Q ss_pred             CCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE-EECCCCHHHHHHHHH
Q ss_conf             6505998538743012305111899987640273512620166336889999996048885055-205520357887635
Q gi|254780767|r  192 WKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEII-IDKEQKKQVFMTCNA  270 (383)
Q Consensus       192 ~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~sd~  270 (383)
                      ++.|.+.-||...    ..+-+++.+.......++..++...........   ..+  ...++. ...-+...++..+++
T Consensus       232 ~~~i~v~~~s~~~----~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~---~~~--l~~~v~~~~~~~~~~~l~~~~~  302 (430)
T 2iyf_A          232 EKVVLVSLGSAFT----KQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAE---LGE--LPDNVEVHDWVPQLAILRQADL  302 (430)
T ss_dssp             SEEEEEECTTTCC-----CHHHHHHHHHHHTTCTTEEEEEECC---CGGG---GCS--CCTTEEEESSCCHHHHHTTCSE
T ss_pred             CCEEEEECCCCCC----CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCH---HHC--CCCCEEEEECCCHHHHHCCCCE
T ss_conf             8569995451023----788999999998873688289999468765101---202--8986899612776887503311


Q ss_pred             HHCCCHH-HHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHH
Q ss_conf             5233115-668887627530254057741000010246761023024407842612420548989999999998449899
Q gi|254780767|r  271 AMAASGT-VILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQ  349 (383)
Q Consensus       271 ai~~SGT-aTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~  349 (383)
                      .++..|. .++|++.+|+|+|++-- ..=.......+.-.-+|+        .++   .+++|++.|++++.++|+|+++
T Consensus       303 ~i~hgG~~t~~EAl~~G~P~i~~P~-~~dQ~~na~~l~~~G~G~--------~l~---~~~~~~~~L~~al~~lL~d~~~  370 (430)
T 2iyf_A          303 FVTHAGAGGSQEGLATATPMIAVPQ-AVDQFGNADMLQGLGVAR--------KLA---TEEATADLLRETALALVDDPEV  370 (430)
T ss_dssp             EEECCCHHHHHHHHHTTCCEEECCC-SHHHHHHHHHHHHTTSEE--------ECC---CC-CCHHHHHHHHHHHHHCHHH
T ss_pred             EEECCCCCHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHCCCEE--------EEC---CCCCCHHHHHHHHHHHHCCHHH
T ss_conf             4423553379999982999999447-254899999999879889--------906---2579999999999999759999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             999999999999983899998999999999861
Q gi|254780767|r  350 RRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       350 r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~L  382 (383)
                      |+++.+.    .+.+.... ..++|+++|-+.+
T Consensus       371 r~~~~~~----~~~~~~~~-g~~~a~~~iE~~~  398 (430)
T 2iyf_A          371 ARRLRRI----QAEMAQEG-GTRRAADLIEAEL  398 (430)
T ss_dssp             HHHHHHH----HHHHHHHC-HHHHHHHHHHTTS
T ss_pred             HHHHHHH----HHHHHCCC-CCHHHHHHHHHHH
T ss_conf             9999999----99987499-9799999999998


No 14 
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.40  E-value=2.7e-11  Score=93.06  Aligned_cols=264  Identities=15%  Similarity=0.117  Sum_probs=146.5

Q ss_pred             HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC-----CCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999861001288868985117765799998663013463111100-----2211003663557999998640156774
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC-----PSVWAWREGRARKMCAYINQVISILPFE  150 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~-----PqvWAWr~~R~k~~~~~~d~~~~ifpFE  150 (383)
                      ....+.+.++..+||+++..-+..+.+ .+..+++. .++|+++.+-     ...|.+..+......+..|.+.++-...
T Consensus        74 ~~~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  151 (394)
T 3okp_A           74 TAHAMAEIIREREIDNVWFGAAAPLAL-MAGTAKQA-GASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYT  151 (394)
T ss_dssp             HHHHHHHHHHHTTCSEEEESSCTTGGG-GHHHHHHT-TCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHH
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCHHHH-HHHHHHHH-CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHH
T ss_conf             999999999974998899447634789-99999981-8996999943343111004578999999986257887369999


Q ss_pred             HHHHHCC--CCCCEEECCCCCCC-CC--CCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCC
Q ss_conf             2232002--55314763882112-21--0013558889761876556505998538743012305111899987640273
Q gi|254780767|r  151 KEVMQRL--GGPPTTFVGHPLSS-SP--SILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNP  225 (383)
Q Consensus       151 ~~~f~k~--~~~~~~fVGHPl~d-~~--~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~  225 (383)
                      .+.+.+.  ..-++.++-|.+-. ..  .........+++.+++++.++| ++.| |-.+ .+....+++++..+.+++|
T Consensus       152 ~~~~~~~~~~~~~i~vipngid~~~~~~~~~~~~~~~r~~~~~~~~~~~i-~~vG-r~~~-~Kg~~~li~a~~~l~~~~~  228 (394)
T 3okp_A          152 LRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVI-ACNS-RLVP-RKGQDSLIKAMPQVIAARP  228 (394)
T ss_dssp             HHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEE-EEES-CSCG-GGCHHHHHHHHHHHHHHST
T ss_pred             HHHHHHHCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEE-EEEE-ECCC-CCCCHHHHHHHHHHHHCCC
T ss_conf             99999845998758997896064423888825579999981999888579-9953-0234-5573368999999742277


Q ss_pred             CCEEEECCCCCHHHHHHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCC------------HHHHHHHHHHCCCE
Q ss_conf             5126201663368899999960488850552----0552035788763552331------------15668887627530
Q gi|254780767|r  226 FFRFSLVTVSSQENLVRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAAS------------GTVILELALCGIPV  289 (383)
Q Consensus       226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~S------------GTaTLE~al~g~P~  289 (383)
                      +.++++.................  ...+..    ...+..+.++.||+.+..|            |.+.+|++.+|+|.
T Consensus       229 ~~~l~i~G~~~~~~~~~~~~~~~--~~~v~~~g~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~E~~~~~~lEAma~G~Pv  306 (394)
T 3okp_A          229 DAQLLIVGSGRYESTLRRLATDV--SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPV  306 (394)
T ss_dssp             TCEEEEECCCTTHHHHHHHTGGG--GGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCE
T ss_pred             CCCEEEECCCCHHHHHHHHHHHC--CCCEEECCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCEE
T ss_conf             65315863772267898876512--4330115754623311334445415764202456767789759999999809969


Q ss_pred             EEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHC
Q ss_conf             2540577410000102467610230244078426124205489899999999984498999999999999-999838
Q gi|254780767|r  290 VSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFEN-LWDRMN  365 (383)
Q Consensus       290 IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~-~~~~Lg  365 (383)
                      | +...+.+...+    .-. .|+        ++     +.-+++.+++.+.++++|++.++++.++..+ +.+...
T Consensus       307 I-~s~~~g~~e~i----~~~-~g~--------l~-----~~~d~~~la~~i~~ll~d~~~~~~~~~~a~~~~~~~fs  364 (394)
T 3okp_A          307 I-AGTSGGAPETV----TPA-TGL--------VV-----EGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWS  364 (394)
T ss_dssp             E-ECSSTTGGGGC----CTT-TEE--------EC-----CTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTB
T ss_pred             E-ECCCCCHHHHC----CCC-CEE--------EE-----CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             9-87999739873----289-589--------97-----89999999999999977999999999999999998689


No 15 
>1rrv_A Glycosyltransferase GTFD; GT-B, rossmann fold; HET: DVV TYD; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.37  E-value=5.9e-10  Score=84.23  Aligned_cols=340  Identities=14%  Similarity=0.066  Sum_probs=170.0

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEE---CHHHCCE-----EEHHHHHHHHHH
Q ss_conf             45999976821478999-99999997389983999971--7899947880650---4445311-----013674664599
Q gi|254780767|r    4 LKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLF---DFSELSV-----IGIMQVVRHLPQ   72 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~---~~~~l~v-----~G~~evl~~~~~   72 (383)
                      |||+++++-+.||++.. .|.++|+++ +.++.|.+-+  .+..++.|++..-   +.....-     ............
T Consensus         1 MrIl~~~~gt~Ghv~P~l~lA~~L~~r-Gh~V~~~t~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (416)
T 1rrv_A            1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAM   79 (416)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             949998798667899999999999987-9989999585677789877986998688466512355311112789998999


Q ss_pred             HHHH-HHHHHHHCCCCCCCEEEEECHHHHHHHH-HHHHHHHCCCCCCEEEEC-------------------CCCCCCC--
Q ss_conf             9999-9999861001288868985117765799-998663013463111100-------------------2211003--
Q gi|254780767|r   73 FIFR-INQTVELIVSSKPDVLLIVDNPDFTHRV-AKRVRKKMPNLPIINYVC-------------------PSVWAWR--  129 (383)
Q Consensus        73 ~~~~-~~~~~~~i~~~~Pd~vi~iD~pgFnl~l-ak~lkk~~~~ipvi~yv~-------------------PqvWAWr--  129 (383)
                      .... .+.+.+.++..+||++|.-|+..+-... |..+     ++|.++...                   |..|.+.  
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~vv~~~~~~~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (416)
T 1rrv_A           80 TVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKL-----GLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVL  154 (416)
T ss_dssp             HHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHH-----TCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-----CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             99999999999996289809999484156999999981-----8985356677501014666533455556432110246


Q ss_pred             ----CCCH-HHHHHHHHHH-------------------CCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf             ----6635-5799999864-------------------015677422320025531476388211221001355888976
Q gi|254780767|r  130 ----EGRA-RKMCAYINQV-------------------ISILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQ  185 (383)
Q Consensus       130 ----~~R~-k~~~~~~d~~-------------------~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~  185 (383)
                          .++. ..+.+.++..                   ...+.+...++......++.++|-+..+......  .+....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~  232 (416)
T 1rrv_A          155 WEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLP--PELEAF  232 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCC--HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCC--HHHHHH
T ss_conf             788888899988899999999847875411333113542000210201566778985897887677665799--999998


Q ss_pred             CCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE-EECCCCHHH
Q ss_conf             1876556505998538743012305111899987640273512620166336889999996048885055-205520357
Q gi|254780767|r  186 RNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEII-IDKEQKKQV  264 (383)
Q Consensus       186 ~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~  264 (383)
                        ++..++.|.+--||....-   .+.+.+.+.......+. .++.....+...     .  .....++. ...-...++
T Consensus       233 --l~~~~~~V~~~~gs~~~~~---~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~-----~--~~~~~~v~~~~~~p~~~l  299 (416)
T 1rrv_A          233 --LAAGSPPVHIGFGSSSGRG---IADAAKVAVEAIRAQGR-RVILSRGWTELV-----L--PDDRDDCFAIDEVNFQAL  299 (416)
T ss_dssp             --HHSSSCCEEECCTTCCSHH---HHHHHHHHHHHHHHTTC-CEEEECTTTTCC-----C--SCCCTTEEEESSCCHHHH
T ss_pred             --HHHCCCCEEECCCCCCCCC---HHHHHHHHHHHHHHCCC-EEEEECCCCCCC-----C--CCCCCCEEEEEECCHHHH
T ss_conf             --8517982896467412378---99999999999985797-799953677542-----2--358897899731278999


Q ss_pred             HHHHHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHH
Q ss_conf             8876355233115668-887627530254057741000010246761023024407842612420548989999999998
Q gi|254780767|r  265 FMTCNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERL  343 (383)
Q Consensus       265 l~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~l  343 (383)
                      |..||+.|+-.|..|+ |++..|+|+|++--.. =.....+.+.-.-+|+        .   +-.+++|++.|++.+.++
T Consensus       300 L~~~~~~IthgG~~s~~Eal~~GvP~v~iP~~~-DQ~~nA~~v~~~G~G~--------~---l~~~~~~~~~l~~ai~~l  367 (416)
T 1rrv_A          300 FRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNT-DQPYFAGRVAALGIGV--------A---HDGPTPTFESLSAALTTV  367 (416)
T ss_dssp             GGGSSEEEECCCHHHHHHHHHHTCCEEECCCSB-THHHHHHHHHHHTSEE--------E---CSSSCCCHHHHHHHHHHH
T ss_pred             HHHCCEEEEECCCHHHHHHHHCCCCEEECCCCC-HHHHHHHHHHHCCCEE--------E---CCCCCCCHHHHHHHHHHH
T ss_conf             843779995088538999998099989736602-0899999999879889--------7---785789999999999998


Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             4498999999999999999838999989999999998619
Q gi|254780767|r  344 SQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVLG  383 (383)
Q Consensus       344 l~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~Lg  383 (383)
                      |+ +++    .++++++.+.+..+  ....+++.|.+.++
T Consensus       368 L~-~~~----~~~A~~~~~~~~~~--g~~~~~~~i~~~~~  400 (416)
T 1rrv_A          368 LA-PET----RARAEAVAGMVLTD--GAAAAADLVLAAVG  400 (416)
T ss_dssp             TS-HHH----HHHHHHHTTTCCCC--HHHHHHHHHHHHHH
T ss_pred             HC-HHH----HHHHHHHHHHHHHC--CCCCHHHHHHHHHC
T ss_conf             29-999----99999999999865--87418999999962


No 16 
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.35  E-value=1.2e-10  Score=88.81  Aligned_cols=343  Identities=12%  Similarity=0.064  Sum_probs=181.0

Q ss_pred             CEEEEEE---CCC-CHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             4599997---682-147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    4 LKIAVIA---GEI-SGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         4 mki~i~a---GE~-SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |||.++.   ..- ....+.-+|+++|.++ +.++.++....+.-...+.+    ...+.+-...    ...+.......
T Consensus         1 m~i~~~~~~y~p~GG~e~~~~~la~~L~~~-Gh~V~v~t~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~   71 (374)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGDCPKAFE----LIQVPVKSHT----NHGRNAEYYAW   71 (374)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSCCCTTCE----EEECCCCCSS----HHHHHHHHHHH
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCCEE----EEECCCCCCC----CCHHHHHHHHH
T ss_conf             979999486799998899999999999977-99699996678777898628----9976764535----30235789999


Q ss_pred             HHHHCCCCCCCEEEEECH-HHHHHH------HHHHHHHHCCCCCCEEEECCCCCCCCC-CCHHHHHHHHHHHCCCCCCCH
Q ss_conf             986100128886898511-776579------999866301346311110022110036-635579999986401567742
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDN-PDFTHR------VAKRVRKKMPNLPIINYVCPSVWAWRE-GRARKMCAYINQVISILPFEK  151 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~-pgFnl~------lak~lkk~~~~ipvi~yv~PqvWAWr~-~R~k~~~~~~d~~~~ifpFE~  151 (383)
                      +.+.+...+||+++..+. |++...      ....+...   .+..+-..+..+.+.. .|........+.+++....-.
T Consensus        72 ~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  148 (374)
T 2iw1_A           72 VQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQE---KGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQI  148 (374)
T ss_dssp             HHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHH---CCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred             HHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEE---CCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEEECHHHH
T ss_conf             999998558868985155403789886403442168863---36430004001105678999965424887999689999


Q ss_pred             HHHHCCCC---CCEEECCCCCCCCC----CCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCC
Q ss_conf             23200255---31476388211221----001355888976187655650599853874301230511189998764027
Q gi|254780767|r  152 EVMQRLGG---PPTTFVGHPLSSSP----SILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRN  224 (383)
Q Consensus       152 ~~f~k~~~---~~~~fVGHPl~d~~----~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~  224 (383)
                      .-+.+..+   -+++.+.|++-...    .....+...+...+++++.+ +.++.|. -.+ .+....+++++.++.++.
T Consensus       149 ~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~g~-~~~-~Kg~~~li~a~~~l~~~~  225 (374)
T 2iw1_A          149 ADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQN-LLLQVGS-DFG-RKGVDRSIEALASLPESL  225 (374)
T ss_dssp             HHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCE-EEEEECS-CTT-TTTHHHHHHHHHTSCHHH
T ss_pred             HHHHHHHCCCHHHEEEECCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCE-EEEECCC-CCC-CCHHHHHHHHHHHHHHCC
T ss_conf             9999983988678999899717766177678067899999719997881-9998156-654-000799999999864403


Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE--ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCC
Q ss_conf             35126201663368899999960488850552--0552035788763552331-----1566888762753025405774
Q gi|254780767|r  225 PFFRFSLVTVSSQENLVRCIVSKWDISPEIII--DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEW  297 (383)
Q Consensus       225 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~  297 (383)
                      ++..+.+.......+.++....+.+....+..  ..++..+.++.||+.+..|     |.+.+|++.+|+|.|+ ...+.
T Consensus       226 ~~~~~~~ig~~~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~pS~~E~~~~~~~EAma~G~PvIa-s~~~g  304 (374)
T 2iw1_A          226 RHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLT-TAVCG  304 (374)
T ss_dssp             HHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEE-ETTST
T ss_pred             CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCEEE-CCCCC
T ss_conf             54279885277533222222223455322233577103266665204430355233333069999974986999-07997


Q ss_pred             CEEEEEECCCCCCEEEEHHHCCCC---CCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             100001024676102302440784---26124205489899999999984498999999999999999838999989999
Q gi|254780767|r  298 IVNFFIFYIKTWTCALPNLIVDYP---LVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA  374 (383)
Q Consensus       298 lt~~i~~lik~~~i~LpNii~~~~---ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A  374 (383)
                      ...               ++-+.+   +++    +.-+++.+++++.++++|++.+++|.++.++..+.... ....+.+
T Consensus       305 ~~e---------------~v~~~~~G~l~~----~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~-~~~~~~~  364 (374)
T 2iw1_A          305 YAH---------------YIADANCGTVIA----EPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL-YSLPEKA  364 (374)
T ss_dssp             TTH---------------HHHHHTCEEEEC----SSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCC-SCHHHHH
T ss_pred             HHH---------------HHCCCCCEEEEC----CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCH-HHHHHHH
T ss_conf             389---------------852798469986----99999999999999977999999999999999997088-9999999


Q ss_pred             HHHHHHHC
Q ss_conf             99999861
Q gi|254780767|r  375 AEIVLQVL  382 (383)
Q Consensus       375 A~~I~~~L  382 (383)
                      ++++...|
T Consensus       365 ~~i~~~~~  372 (374)
T 2iw1_A          365 ADIITGGL  372 (374)
T ss_dssp             HHHHHCC-
T ss_pred             HHHHHHHC
T ss_conf             99998641


No 17 
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.33  E-value=2.8e-09  Score=79.74  Aligned_cols=336  Identities=11%  Similarity=0.015  Sum_probs=159.9

Q ss_pred             CEEEEEECCC-----CHHH--HHHHHHHHHHHHCCCCEEEEEECCHHHHH-------------------------CCCEE
Q ss_conf             4599997682-----1478--99999999997389983999971789994-------------------------78806
Q gi|254780767|r    4 LKIAVIAGEI-----SGDL--LAGDLIKSLKEMVSYPINLVGVGGPSLQK-------------------------EGLVS   51 (383)
Q Consensus         4 mki~i~aGE~-----SGD~--~~a~li~~Lk~~~~~~~~~~giGG~~m~~-------------------------~G~~~   51 (383)
                      |||+.++.|.     +|-+  ....|.++|.++ +.++.+.-=+-+....                         .|++.
T Consensus         1 M~I~~v~~e~~p~~~~GGl~~~v~~L~~aL~~~-Gh~V~VitP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~   79 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIAD-GVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGI   79 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHT-TCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEE
T ss_pred             CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCHHHCCCCCEEEEEECCCCEEEEEEEEEECCCEE
T ss_conf             979999772256235466999999999999976-9979999689857324467756878861477278899999899569


Q ss_pred             EE------------CHHHCCEEEHHHHHHHHHHHHHHHHH-HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             50------------44453110136746645999999999-986100128886898511776579999866301346311
Q gi|254780767|r   52 LF------------DFSELSVIGIMQVVRHLPQFIFRINQ-TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        52 ~~------------~~~~l~v~G~~evl~~~~~~~~~~~~-~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+            ++.+-+.-++...+.....+...... ....+...+||++-+=|..+.-...  .+..+..++|++
T Consensus        80 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiiH~h~~~~~~~~~--~~~~~~~~i~~v  157 (485)
T 2qzs_A           80 YLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPA--YLAARGRPAKSV  157 (485)
T ss_dssp             EEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHH--HHHHTTCSSEEE
T ss_pred             EEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH--HHHHHCCCCCEE
T ss_conf             994585662378876677545553117888889999999999974557998399988801767788--887625899889


Q ss_pred             EEECCCC----CCC-------------C------C---CCHHHHHHHHHHHCCCCCCCHHHHHC--------------CC
Q ss_conf             1100221----100-------------3------6---63557999998640156774223200--------------25
Q gi|254780767|r  119 NYVCPSV----WAW-------------R------E---GRARKMCAYINQVISILPFEKEVMQR--------------LG  158 (383)
Q Consensus       119 ~yv~Pqv----WAW-------------r------~---~R~k~~~~~~d~~~~ifpFE~~~f~k--------------~~  158 (383)
                      +-+---.    |.+             +      .   +-.+...++.|.+.++-+...+....              ..
T Consensus       158 ~t~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~  237 (485)
T 2qzs_A          158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHR  237 (485)
T ss_dssp             EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHH
T ss_pred             EEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCCC
T ss_conf             98136433664564342110333100465553211155699999985061220378899999975023571655421255


Q ss_pred             CCCEEECCCCCC-------------------CCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHH
Q ss_conf             531476388211-------------------2210013558889761876556505998538743012305111899987
Q gi|254780767|r  159 GPPTTFVGHPLS-------------------SSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVAS  219 (383)
Q Consensus       159 ~~~~~fVGHPl~-------------------d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~  219 (383)
                      .-+...+=++..                   ................+.+.+.....++--+|-...|. ...+++++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~KG-~~~li~a~~~  316 (485)
T 2qzs_A          238 EGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKG-LDLVLEALPG  316 (485)
T ss_dssp             TTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGC-HHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC-CHHHHHHHHH
T ss_conf             686566048866432476556443333431135665567888877514777899529999334432478-3679999999


Q ss_pred             HHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE--ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEE
Q ss_conf             6402735126201663368899999960488850552--0552035788763552331-----15668887627530254
Q gi|254780767|r  220 LVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIII--DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSI  292 (383)
Q Consensus       220 l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~  292 (383)
                      +.+.++++.+.....+..+...............+..  .......+++++|+.+..|     |.+-||++.+|+| ||+
T Consensus       317 l~~~~~~l~l~g~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dv~v~pS~~E~fgl~~lEAma~G~P-VVa  395 (485)
T 2qzs_A          317 LLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL-PLV  395 (485)
T ss_dssp             HHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCE-EEE
T ss_pred             HHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC-EEE
T ss_conf             8705962999816880677899999975688637860566677679987511156985345787699999987998-999


Q ss_pred             CCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHH
Q ss_conf             057741000010246761023024407842612420548989999999998449899999
Q gi|254780767|r  293 YKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRA  352 (383)
Q Consensus       293 Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~  352 (383)
                      .+++.+...+..-   .    ......... -=++-+..+++.+++++.++|++.+.++.
T Consensus       396 s~~gG~~E~i~~g---~----~~~~~~~~~-~G~lv~~~d~~~la~ai~~~L~~~~~~~~  447 (485)
T 2qzs_A          396 RRTGGLADTVSDC---S----LENLADGVA-SGFVFEDSNAWSLLRAIRRAFVLWSRPSL  447 (485)
T ss_dssp             ESSHHHHHHCCBC---C----HHHHHTTCC-CBEEECSSSHHHHHHHHHHHHHHHTSHHH
T ss_pred             ECCCCCCCEEECC---C----CCCCCCCCC-CEEEECCCCHHHHHHHHHHHHHCCCCHHH
T ss_conf             1899976265158---6----443456777-46996899999999999999819257999


No 18 
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthase, two rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A*
Probab=99.30  E-value=1e-09  Score=82.64  Aligned_cols=335  Identities=13%  Similarity=0.052  Sum_probs=172.3

Q ss_pred             CCCEEEEEECC----CCHH--HHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEE-------------ECHHHCC---
Q ss_conf             87459999768----2147--899999999997389983999971789994788065-------------0444531---
Q gi|254780767|r    2 NSLKIAVIAGE----ISGD--LLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSL-------------FDFSELS---   59 (383)
Q Consensus         2 ~~mki~i~aGE----~SGD--~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~-------------~~~~~l~---   59 (383)
                      +.|||.+++=+    .||-  .+...|.++|.++ +.++++.--+.+..+.+....+             .......   
T Consensus         1 ~~MkIl~~~~~~~P~~~GG~~~~~~~La~~L~~~-Gh~V~vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~   79 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR   79 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred             CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCHHHCCCCEECCCCCCEEEEEECCCCCEEEE
T ss_conf             9709999888679856787999999999999976-998999915898755444255012154431012344158807997


Q ss_pred             ------------EEEHHHHHHHHHHHHHHHHHHHHHC--CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC---
Q ss_conf             ------------1013674664599999999998610--01288868985117765799998663013463111100---
Q gi|254780767|r   60 ------------VIGIMQVVRHLPQFIFRINQTVELI--VSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC---  122 (383)
Q Consensus        60 ------------v~G~~evl~~~~~~~~~~~~~~~~i--~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~---  122 (383)
                                  ..+....+.+...+.+........+  ....||++..-|.+.  .-++..+++. .++|+++.+-   
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~--~~~~~~~~~~-~~~~~v~~~h~~~  156 (439)
T 3fro_A           80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT--VFAGALIKKY-FKIPAVFTIHRLN  156 (439)
T ss_dssp             EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG--HHHHHHHHHH-HCCCEEEEESCCC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH--HHHHHHHHHH-CCCCEEEEECCCC
T ss_conf             275534542236765025899999889999999999997279984899888427--8999999850-4998799964664


Q ss_pred             CCCCCCC---C---------CC---HHHHHHHHHHHCCCCCCCH----HHHHCCCCCCEEECCCCCCCCC--------CC
Q ss_conf             2211003---6---------63---5579999986401567742----2320025531476388211221--------00
Q gi|254780767|r  123 PSVWAWR---E---------GR---ARKMCAYINQVISILPFEK----EVMQRLGGPPTTFVGHPLSSSP--------SI  175 (383)
Q Consensus       123 PqvWAWr---~---------~R---~k~~~~~~d~~~~ifpFE~----~~f~k~~~~~~~fVGHPl~d~~--------~~  175 (383)
                      ++-+.|.   .         .+   -+...+..|.+.+..+...    .+|.... -++..+-|++-...        ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~i~vi~ng~d~~~~~~~~~~~~~  235 (439)
T 3fro_A          157 KSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFE-GKITYVFNGIDCSFWNESYLTGSR  235 (439)
T ss_dssp             CCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGT-TSEEECCCCCCTTTSCGGGSCSCH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCC-CCEEEECCCCCCHHHCCCCCCCCH
T ss_conf             4567520122124103456778899998886468899888899999987637871-148997488660120200023205


Q ss_pred             CCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHH--CCCCCEEEECCCCCH--HHHHHHHHHHCCCC
Q ss_conf             13558889761876556505998538743012305111899987640--273512620166336--88999999604888
Q gi|254780767|r  176 LEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVK--RNPFFRFSLVTVSSQ--ENLVRCIVSKWDIS  251 (383)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~--~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~  251 (383)
                      .......+++++++++ . ..++-|+. .+.++.+..+++++..+..  ..+++++++......  +...+......+ +
T Consensus       236 ~~~~~~~~~~~~~~~~-~-~il~~g~l-~~~~Kg~~~li~a~~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~-~  311 (439)
T 3fro_A          236 DERKKSLLSKFGMDEG-V-TFMFIGRF-DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-N  311 (439)
T ss_dssp             HHHHHHHHHHHTCCSC-E-EEEEECCS-SCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-T
T ss_pred             HHHHHHHHHHHCCCCC-C-EEEEECCC-CCCCCCHHHEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCC-C
T ss_conf             6779999998468878-6-69985232-34665533212000223222357773799953797301467877765045-3


Q ss_pred             CEEEE---ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCC
Q ss_conf             50552---0552035788763552331-----156688876275302540577410000102467610230244078426
Q gi|254780767|r  252 PEIII---DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLV  323 (383)
Q Consensus       252 ~~i~~---~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~iv  323 (383)
                      ..+..   ..++....++.||+.+.+|     |.+.+|++.+|+| ||+..++.+...               +-++.- 
T Consensus       312 ~~~~~~~~~~~~~~~~~~~adv~~~~s~~E~~~~~~~Eama~G~P-vI~~~~g~~~ei---------------i~~~~G-  374 (439)
T 3fro_A          312 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAI-PIASAVGGLRDI---------------ITNETG-  374 (439)
T ss_dssp             EEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCE-EEEESSTHHHHH---------------CCTTTC-
T ss_pred             EEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC-EEEECCCCCHHE---------------EECCCE-
T ss_conf             289973266788999876321355555232231799999987998-999379982650---------------888948-


Q ss_pred             CHHHCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHH
Q ss_conf             1242054898999999999844-9899999999999999983
Q gi|254780767|r  324 PEYFNSMIRSEALVRWIERLSQ-DTLQRRAMLHGFENLWDRM  364 (383)
Q Consensus       324 PEliQ~~~~~~~i~~~~~~ll~-d~~~r~~~~~~~~~~~~~L  364 (383)
                       -++ +.-+++.+++.+.++++ |++.++++.++..+..++.
T Consensus       375 -~lv-~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~  414 (439)
T 3fro_A          375 -ILV-KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF  414 (439)
T ss_dssp             -EEE-CTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTS
T ss_pred             -EEE-CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf             -998-7999999999999998379999999999999999969


No 19 
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=99.27  E-value=4.7e-11  Score=91.47  Aligned_cols=323  Identities=14%  Similarity=0.051  Sum_probs=167.8

Q ss_pred             CEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHC-CEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             459999768214789-9999999997389983999971789994788065044453-11013674664599999999998
Q gi|254780767|r    4 LKIAVIAGEISGDLL-AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSEL-SVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         4 mki~i~aGE~SGD~~-~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l-~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      |||+|+....=||.. ...++++||+..| +.++.-++++..++.    +.+...+ .++.+  ...+.........++.
T Consensus         1 MrILii~~~~iGD~i~~~p~i~~Lk~~~P-~~~I~~l~~~~~~~l----~~~~p~id~v~~~--~~~~~~~~~~~~~~~~   73 (348)
T 1psw_A            1 MKILVIGPSWVGDMMMSQSLYRTLQARYP-QAIIDVMAPAWCRPL----LSRMPEVNEAIPM--PLGHGALEIGERRKLG   73 (348)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHHST-TCEEEEEECGGGHHH----HTTCTTEEEEEEC---------CHHHHHHHH
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECHHHHHH----HHCCCCCCEEEEE--CCCCCCCCHHHHHHHH
T ss_conf             96999918960999999999999998789-998999988508999----8519986789995--7853301378999999


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC-----CCCCHHHHHHHHHHHCCCCCCCHHHHHC
Q ss_conf             61001288868985117765799998663013463111100221100-----3663557999998640156774223200
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAW-----REGRARKMCAYINQVISILPFEKEVMQR  156 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAW-----r~~R~k~~~~~~d~~~~ifpFE~~~f~k  156 (383)
                      +.++..++|.++..+..-.+.-++...     +++..+......+.|     +..+........+.-+.+... ..... 
T Consensus        74 ~~l~~~~~D~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  146 (348)
T 1psw_A           74 HSLREKRYDRAYVLPNSFKSALVPLFA-----GIPHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYIALAYD-KGIMR-  146 (348)
T ss_dssp             HHTTTTTCSEEEECSCCSGGGHHHHHT-----TCSEEEEECTTTCTTTCTEEECCCTTTCCSHHHHHHHTTSC-GGGCS-
T ss_pred             HHHHHCCCCEEEECCCCCHHHHHHHHH-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCC-
T ss_conf             997541687764235430136778764-----16511132312232334443334433331478888989876-40222-


Q ss_pred             CCCCCEEECCCCCCCC--CCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCC--HHHHHHHHHHCCCCCEEEEC
Q ss_conf             2553147638821122--1001355888976187655650599853874301230511--18999876402735126201
Q gi|254780767|r  157 LGGPPTTFVGHPLSSS--PSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPF--FESAVASLVKRNPFFRFSLV  232 (383)
Q Consensus       157 ~~~~~~~fVGHPl~d~--~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~--~l~~~~~l~~~~~~~~~~i~  232 (383)
                          ....+..|....  ..............+...++++|++.||++...- +.+|.  +.+.++.+.++  +.++++.
T Consensus       147 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~-k~wp~~~~~~l~~~l~~~--~~~ivl~  219 (348)
T 1psw_A          147 ----TAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPA-KRWPHYHYAELAKQLIDE--GYQVVLF  219 (348)
T ss_dssp             ----SGGGSCSSCCCCCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGG-GSCCHHHHHHHHHHHHHT--TCEEEEC
T ss_pred             ----CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHC-CCCCHHHHHHHHHHHHHC--CCCEECC
T ss_conf             ----222455433576667898999999864124667874884587552113-689689899999998753--9831205


Q ss_pred             CCCCHHHHHHHHHHHCCCC--CEEEE-----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEE--E
Q ss_conf             6633688999999604888--50552-----0552035788763552331156688876275302540577410000--1
Q gi|254780767|r  233 TVSSQENLVRCIVSKWDIS--PEIII-----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYKSEWIVNFF--I  303 (383)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~--~~i~~-----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i--~  303 (383)
                      ..++..+............  ..+..     .-.+.-.++..||+.|+..+...=-++++|+|+|++|..+....+.  .
T Consensus       220 ~~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dtg~~HlAaalg~p~v~lfg~~~~~~~~P~~  299 (348)
T 1psw_A          220 GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLS  299 (348)
T ss_dssp             CCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHHHHHTTCCEEEEESSSCTTSSCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCC
T ss_conf             78467999999999853201454334457655899999995163675279759999998099989997899861408789


Q ss_pred             ECCCCCCEEEEHHHCCCC----CCCHHHCCCCCHHHHHHHHHHHHCCHH
Q ss_conf             024676102302440784----261242054898999999999844989
Q gi|254780767|r  304 FYIKTWTCALPNLIVDYP----LVPEYFNSMIRSEALVRWIERLSQDTL  348 (383)
Q Consensus       304 ~lik~~~i~LpNii~~~~----ivPEliQ~~~~~~~i~~~~~~ll~d~~  348 (383)
                      ...++-+..++.-=..+.    -..+.++ +.+|+.+.+++.++|.+.+
T Consensus       300 ~~~~vi~~~~~c~~c~~~~~~~~~~~c~~-~I~~~~V~~~l~~~L~~~~  347 (348)
T 1psw_A          300 HKARVIRLITGYHKVRKGDAAEGYHQSLI-DITPQRVLEELNALLLQEE  347 (348)
T ss_dssp             TTEEEEESSCC----------CCCCHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCHHHHC-CCCHHHHHHHHHHHHCCCC
T ss_conf             98699945898776668888887546573-8999999999999853388


No 20 
>2p6p_A Glycosyl transferase; GT-B family, X-RAY-diffraction,urdamycina- biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.26  E-value=3.4e-10  Score=85.82  Aligned_cols=335  Identities=12%  Similarity=0.124  Sum_probs=158.6

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECC--HHHHHCCCEEEECHHHCCE----------------EEHH
Q ss_conf             45999976821478999-999999973899839999717--8999478806504445311----------------0136
Q gi|254780767|r    4 LKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGG--PSLQKEGLVSLFDFSELSV----------------IGIM   64 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG--~~m~~~G~~~~~~~~~l~v----------------~G~~   64 (383)
                      |||+++++-..||+... .|.++|+++ +.++.+.+-++  +..++.|++... ......                ....
T Consensus         1 Mrilf~~~~~~GH~~~~l~LA~aL~~~-GH~V~v~t~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (384)
T 2p6p_A            1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGPVVTGVGLPAVA-TTDLPIRHFITTDREGRPEAIPSDPV   78 (384)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCCEEE-SCSSCHHHHHHBCTTSCBCCCCCSHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHCCCEEEE-CCCCHHHHHHCCCCCCCCCCCCHHHH
T ss_conf             949998899661899999999999988-9989999485267679866985784-48740555402333455322311268


Q ss_pred             HHHHHHHHH-----HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC---HHHH
Q ss_conf             746645999-----99999998610012888689851177657999986630134631111002211003663---5579
Q gi|254780767|r   65 QVVRHLPQF-----IFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGR---ARKM  136 (383)
Q Consensus        65 evl~~~~~~-----~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R---~k~~  136 (383)
                      .........     ......+.......+||+++.-.+...-...+..+     ++|...... ..+.+...+   ...+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~a~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (384)
T 2p6p_A           79 AQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHL-----GVPHARQTW-DAVDADGIHPGADAEL  152 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHH-----TCCEEEECC-SSCCCTTTHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH-----CCCEEEEEC-CCCCCHHHCCCHHHHH
T ss_conf             9999999999999999999999998651996899577550899999994-----998387512-4566132110237888


Q ss_pred             HHHHHHH-CCCCCCCHHHH----------HCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf             9999864-01567742232----------002553147638821122100135588897618765565059985387430
Q gi|254780767|r  137 CAYINQV-ISILPFEKEVM----------QRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQE  205 (383)
Q Consensus       137 ~~~~d~~-~~ifpFE~~~f----------~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~E  205 (383)
                      ....... +.-++.....+          ....+....+++..         .........+..++.+.+.+..||....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~v~~G~~~~~  223 (384)
T 2p6p_A          153 RPELSELGLERLPAPDLFIDICPPSLRPANAAPARMMRHVATS---------RQCPLEPWMYTRDTRQRVLVTSGSRVAK  223 (384)
T ss_dssp             HHHHHHTTCSSCCCCSEEEECSCGGGSCTTSCCCEECCCCCCC---------CCCBCCHHHHCCCSSCEEEEECSSSSSC
T ss_pred             HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC---------CCCCCCHHHHCCCCCCEEEEECCCHHHH
T ss_conf             8887541432245652587247600035645666663425776---------6565822230479996799988943530


Q ss_pred             H--HHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHH-HHH
Q ss_conf             1--2305111899987640273512620166336889999996048885055205520357887635523311566-888
Q gi|254780767|r  206 I--YKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVI-LEL  282 (383)
Q Consensus       206 I--~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaT-LE~  282 (383)
                      .  ......+......+ ... ...+..........   ..... ..  .+.+..-+....+..+|+.++.+|..| +|+
T Consensus       224 ~~~~~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~---~~~~~-~~--~~~~~~~p~~~~l~~ad~~v~~gg~~t~~Ea  295 (384)
T 2p6p_A          224 ESYDRNFDFLRGLAKDL-VRW-DVELIVAAPDTVAE---ALRAE-VP--QARVGWTPLDVVAPTCDLLVHHAGGVSTLTG  295 (384)
T ss_dssp             CSSCCCCTTHHHHHHHH-HTT-TCEEEEECCHHHHH---HHHHH-CT--TSEEECCCHHHHGGGCSEEEECSCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-HHC-CEEEEEEECCCCCC---CCCCC-CC--CEEEEECCCHHCCCCEEEEEECCCCCHHHHH
T ss_conf             00067999999999762-012-21346873574222---33567-88--2599724820011423289953776289999


Q ss_pred             HHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             76275302540577410000102467610230244078426124205489899999999984498999999999999999
Q gi|254780767|r  283 ALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWD  362 (383)
Q Consensus       283 al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~  362 (383)
                      +.+|+|+|++-- ..-.......+.-.-.|+        ++|   .+++|++.|+.++.++|+|+++|++..    ++.+
T Consensus       296 l~~GvP~v~~P~-~~dQ~~~a~~l~~~G~G~--------~l~---~~~~~~~~la~ai~~lL~dp~~r~~a~----~~~~  359 (384)
T 2p6p_A          296 LSAGVPQLLIPK-GSVLEAPARRVADYGAAI--------ALL---PGEDSTEAIADSCQELQAKDTYARRAQ----DLSR  359 (384)
T ss_dssp             HHTTCCEEECCC-SHHHHHHHHHHHHHTSEE--------ECC---TTCCCHHHHHHHHHHHHHCHHHHHHHH----HHHH
T ss_pred             HHCCCCEEEECC-CCCHHHHHHHHHHCCCEE--------EEC---CCCCCHHHHHHHHHHHHCCHHHHHHHH----HHHH
T ss_conf             980999899747-442799999999879989--------916---146999999999999977999999999----9999


Q ss_pred             HHCCCCCHHHHHHHHHHH
Q ss_conf             838999989999999998
Q gi|254780767|r  363 RMNTKKPAGHMAAEIVLQ  380 (383)
Q Consensus       363 ~Lg~~~~a~~~AA~~I~~  380 (383)
                      ++....++.+.+ +.+.+
T Consensus       360 ~~~~~~~~~~~~-~~le~  376 (384)
T 2p6p_A          360 EISGMPLPATVV-TALEQ  376 (384)
T ss_dssp             HHHTSCCHHHHH-HHHHH
T ss_pred             HHHCCCCHHHHH-HHHHH
T ss_conf             983599999999-99999


No 21 
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.22  E-value=9.5e-09  Score=76.24  Aligned_cols=164  Identities=12%  Similarity=0.010  Sum_probs=93.0

Q ss_pred             HHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECC
Q ss_conf             89761876556505998538743012305111899987640273512620166336889999996048885055--2055
Q gi|254780767|r  182 RNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKE  259 (383)
Q Consensus       182 ~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~  259 (383)
                      ...+.+..+.+..+.++.| |-.+.|. ...+++++..+.+.++++.++.......................+.  ...+
T Consensus       280 ~~~~~~~~~~~~~~il~~g-rl~~~Kg-~~~l~~a~~~~~~~~~~l~l~g~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~  357 (485)
T 1rzu_A          280 VAEHFRIDDDGSPLFCVIS-RLTWQKG-IDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEP  357 (485)
T ss_dssp             HHHHHTCCCSSSCEEEEES-CBSTTTT-HHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHH
T ss_pred             HHHHCCCCCCCCEEEEEEC-CEECCCC-CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHH
T ss_conf             7653022568970899974-1523678-6689999987312475299982687357899999997568827885475716


Q ss_pred             CCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHH
Q ss_conf             2035788763552331-----15668887627530254057741000010246761023024407842612420548989
Q gi|254780767|r  260 QKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSE  334 (383)
Q Consensus       260 ~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~  334 (383)
                      +....++.||+.+..|     |.+.+|++.+|+| ||+.+++.+...+.--   .    ...+......= ++-+.-+++
T Consensus       358 ~~~~~~~~aDv~v~pS~~E~fgl~~lEAma~G~P-vIas~~gg~~E~I~dg---~----~~~~~~~~~~G-~lv~~~d~~  428 (485)
T 1rzu_A          358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI-PVVARTGGLADTVIDA---N----HAALASKAATG-VQFSPVTLD  428 (485)
T ss_dssp             HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCE-EEEESSHHHHHHCCBC---C----HHHHHTTCCCB-EEESSCSHH
T ss_pred             HHHHHHHHCCCCCCCCCHHCCCHHHHHHHHCCCC-EEECCCCCCCCEEECC---C----CCCCCCCCCCE-EEECCCCHH
T ss_conf             6589986272435882141157899999986998-9994799864045358---7----54224578734-997899999


Q ss_pred             HHHHHHHHHHC---CHHHHHHHHHH
Q ss_conf             99999999844---98999999999
Q gi|254780767|r  335 ALVRWIERLSQ---DTLQRRAMLHG  356 (383)
Q Consensus       335 ~i~~~~~~ll~---d~~~r~~~~~~  356 (383)
                      .+++++.++++   |++.+.++..+
T Consensus       429 ~la~~i~~~l~~~~~~~~~~~~~~~  453 (485)
T 1rzu_A          429 GLKQAIRRTVRYYHDPKLWTQMQKL  453 (485)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             9999999998371899999999999


No 22 
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.22  E-value=1.4e-08  Score=75.22  Aligned_cols=333  Identities=12%  Similarity=0.035  Sum_probs=151.5

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEE---CHHH------CCEEEHHHHHHHHH
Q ss_conf             45999976821478999-99999997389983999971--7899947880650---4445------31101367466459
Q gi|254780767|r    4 LKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLF---DFSE------LSVIGIMQVVRHLP   71 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~---~~~~------l~v~G~~evl~~~~   71 (383)
                      |||++.+|.+-||++.. .|.++|+++ +.++.|.+=+  -+..++.|++..-   +...      ....++.+.+..+ 
T Consensus         1 m~i~~~~~Gt~G~v~P~lalA~~L~~r-Gh~V~~~t~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (404)
T 3h4t_A            1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEV-   78 (404)
T ss_dssp             -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHH-
T ss_conf             969999176824899999999999987-997999978017778987798699878258766028777779999999999-


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECHH--HHHHHHHHHHHHHCCCCCCEEEEC-------CCCCCCCCCCHHHHHHHHHH
Q ss_conf             999999999861001288868985117--765799998663013463111100-------22110036635579999986
Q gi|254780767|r   72 QFIFRINQTVELIVSSKPDVLLIVDNP--DFTHRVAKRVRKKMPNLPIINYVC-------PSVWAWREGRARKMCAYINQ  142 (383)
Q Consensus        72 ~~~~~~~~~~~~i~~~~Pd~vi~iD~p--gFnl~lak~lkk~~~~ipvi~yv~-------PqvWAWr~~R~k~~~~~~d~  142 (383)
                       +...++.+...  ..+||+||.-...  .+....+...    ..++.++...       +..+.+.........+....
T Consensus        79 -~~~~~~~l~~~--~~~~D~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (404)
T 3h4t_A           79 -VAEWFDKVPAA--IEGCDAVVTTGLLPAAVAVRSMAEK----LGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGD  151 (404)
T ss_dssp             -HHHHHHHHHHH--HTTCSEEEEEECHHHHHHHHHHHHH----HTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHH--CCCCCEEEECCCCHHHHHHHHHHHH----CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             -99999999984--2798999999971788999999986----1887200245753244323320256778888888899


Q ss_pred             HC------CCCCCCHHHHH------------------CCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEE
Q ss_conf             40------15677422320------------------0255314763882112210013558889761876556505998
Q gi|254780767|r  143 VI------SILPFEKEVMQ------------------RLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLL  198 (383)
Q Consensus       143 ~~------~ifpFE~~~f~------------------k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~ll  198 (383)
                      .+      .-+|.....+.                  +....+...++-+........  .......  +..+.+.+.+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~v~v~  227 (404)
T 3h4t_A          152 AVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDQRPL--SAELEGF--LRAGSPPVYVG  227 (404)
T ss_dssp             HHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCC--CHHHHHH--HHTSSCCEEEC
T ss_pred             HHHHHHHHCCCCCCCHHHCCCCCCCCEECCCHHHCCCCCCCCEEEEECCCCCCCCCCC--CHHHHHH--HHCCCCEEEEE
T ss_conf             9999998617985202210344554222256442256776660365458667766678--8889987--51189818996


Q ss_pred             ECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE-ECCCCHHHHHHHHHHHCCCHH
Q ss_conf             5387430123051118999876402735126201663368899999960488850552-055203578876355233115
Q gi|254780767|r  199 PGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIII-DKEQKKQVFMTCNAAMAASGT  277 (383)
Q Consensus       199 PGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~l~~sd~ai~~SGT  277 (383)
                      .||...- ...+..++++...+     +..+++...+...       .......++.+ ..-+...++..+|+.|+-+|.
T Consensus       228 ~gs~~~~-~~~~~~~~~al~~~-----~~~~i~~~~~~~~-------~~~~~~~~v~~~~~~p~~~~l~~~~~~I~hgG~  294 (404)
T 3h4t_A          228 FGSGPAP-AEAARVAIEAVRAQ-----GRRVVLSSGWAGL-------GRIDEGDDCLVVGEVNHQVLFGRVAAVVHHGGA  294 (404)
T ss_dssp             CTTSCCC-TTHHHHHHHHHHHT-----TCCEEEECTTTTC-------CCSSCCTTEEEESSCCHHHHGGGSSEEEECCCH
T ss_pred             ECCCCCC-HHHHHHHHHHHHHC-----CCEEEEEECCCCC-------CCCCCCCCEEEECCCCCHHHHHHCCEEEEECCC
T ss_conf             1676683-79999999999967-----9869999535666-------655678874651345506655225689982680


Q ss_pred             HHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             668-8876275302540577410000102467610230244078426124205489899999999984498999999999
Q gi|254780767|r  278 VIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHG  356 (383)
Q Consensus       278 aTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~  356 (383)
                      .|+ |++.+|+|+|++--.. =.....+.+.-.-+|+        .++   ++++|++.|+.++.++++ +++|+    +
T Consensus       295 ~ti~Eal~~GvP~v~~P~~~-dQ~~nA~~l~~~G~G~--------~l~---~~~~t~~~l~~ai~~ll~-~~~r~----~  357 (404)
T 3h4t_A          295 GTTTAVTRAGAPQVVVPQKA-DQPYYAGRVADLGVGV--------AHD---GPTPTVESLSAALATALT-PGIRA----R  357 (404)
T ss_dssp             HHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEE--------ECS---SSSCCHHHHHHHHHHHTS-HHHHH----H
T ss_pred             HHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCEE--------ECC---CCCCCHHHHHHHHHHHHC-HHHHH----H
T ss_conf             59999998299989806724-2899999999879888--------788---578999999999999859-99999----9


Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             9999998389999899999999986
Q gi|254780767|r  357 FENLWDRMNTKKPAGHMAAEIVLQV  381 (383)
Q Consensus       357 ~~~~~~~Lg~~~~a~~~AA~~I~~~  381 (383)
                      .+++.+++...+ ..+.| +.+.+.
T Consensus       358 a~~~a~~~~~~~-~~~~a-~~l~e~  380 (404)
T 3h4t_A          358 AAAVAGTIRTDG-TTVAA-KLLLEA  380 (404)
T ss_dssp             HHHHHTTCCCCH-HHHHH-HHHHHH
T ss_pred             HHHHHHHHHHCC-HHHHH-HHHHHH
T ss_conf             999999987558-39999-999999


No 23 
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase, center for structural genomics of infectious diseases; 2.35A {Vibrio cholerae}
Probab=99.20  E-value=5e-08  Score=71.48  Aligned_cols=340  Identities=14%  Similarity=0.079  Sum_probs=180.3

Q ss_pred             CCC-EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH--HHH-----CCCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf             874-599997682147899999999997389983999-971789--994-----78806504445311013674664599
Q gi|254780767|r    2 NSL-KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS--LQK-----EGLVSLFDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         2 ~~m-ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~--m~~-----~G~~~~~~~~~l~v~G~~evl~~~~~   72 (383)
                      +.| ||++++|--+-=...+.|+++|++.  +++++. -+.|.+  |..     -|.+.-++   +.+..-.+.+.  ..
T Consensus        23 ~~MkKI~~v~GtR~e~~kl~pli~~l~~~--~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~---~~~~~~~~s~~--~~   95 (396)
T 3dzc_A           23 NAMKKVLIVFGTRPEAIKMAPLVQQLCQD--NRFVAKVCVTGQHREMLDQVLELFSITPDFD---LNIMEPGQTLN--GV   95 (396)
T ss_dssp             -CCEEEEEEECSHHHHHHHHHHHHHHHHC--TTEEEEEEECCSSSHHHHHHHHHTTCCCSEE---CCCCCTTCCHH--HH
T ss_pred             CCCCCEEEEEECCHHHHHHHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHHHHCCCCCCEE---ECCCCCCCCHH--HH
T ss_conf             59861899997037099999999999738--9987799990899889999998549888732---21588999899--99


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCC-CCCCC-CCHHHHHHHHHHHCCC-CCC
Q ss_conf             99999999861001288868985117765799998663013463111100221-10036-6355799999864015-677
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSV-WAWRE-GRARKMCAYINQVISI-LPF  149 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~Pqv-WAWr~-~R~k~~~~~~d~~~~i-fpF  149 (383)
                      +-.....+-+.+.+.+||+|+..  .|=+=-+|-.+-....+||++|.=+=-. --|.+ .-=...+..+|++..+ |+-
T Consensus        96 ~~~~i~~~~~~~~~~kpD~VlV~--GDr~e~la~a~aa~~~~ipi~HiegG~rs~~~~~~~pde~~R~~isklS~lhf~~  173 (396)
T 3dzc_A           96 TSKILLGMQQVLSSEQPDVVLVH--GDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAP  173 (396)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEE--TTSHHHHHHHHHHHTTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEES
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECC
T ss_conf             99999999999997199999995--8886225489999982997899971265468877982677663235420499515


Q ss_pred             CHHHHHCC-----CCCCEEECCCCCCCCCCCCCC--------HHHHHHH-CCCCCCCCEEEEEECCCCCCHHHHCCCHHH
Q ss_conf             42232002-----553147638821122100135--------5888976-187655650599853874301230511189
Q gi|254780767|r  150 EKEVMQRL-----GGPPTTFVGHPLSSSPSILEV--------YSQRNKQ-RNTPSQWKKILLLPGSRAQEIYKILPFFES  215 (383)
Q Consensus       150 E~~~f~k~-----~~~~~~fVGHPl~d~~~~~~~--------~~~~~~~-~~~~~~~~~I~llPGSR~~EI~~~lP~~l~  215 (383)
                      .+...++.     ..-++..||+|..|.+.....        ....... ..++..++.+++..=-+.++ ...+--+..
T Consensus       174 te~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLvt~Hr~~n~-~~~~~~~~~  252 (396)
T 3dzc_A          174 TDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESF-GGGFERICQ  252 (396)
T ss_dssp             SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCC-TTHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CHHHHHHHH
T ss_conf             3568999987078854440114430778998876403426766667654344356787799973621022-058999999


Q ss_pred             HHHHHHHCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEEE----CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCE
Q ss_conf             998764027351262016633688--999999604888505520----55203578876355233115668887627530
Q gi|254780767|r  216 AVASLVKRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIIID----KEQKKQVFMTCNAAMAASGTVILELALCGIPV  289 (383)
Q Consensus       216 ~~~~l~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~~----~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~  289 (383)
                      ....+....++..+++|..+....  .......   ...++.+.    ..+...++..|++.|+=||+.-.|++.+|+|+
T Consensus       253 ~~~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~---~~~ni~~i~~l~~~~fl~ll~~a~~vIgnSssg~~EA~~lg~P~  329 (396)
T 3dzc_A          253 ALITTAEQHPECQILYPVHLNPNVREPVNKLLK---GVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPV  329 (396)
T ss_dssp             HHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTT---TCTTEEEECCCCHHHHHHHHHHCSEEEESCSGGGTTGGGGTCCE
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH---CCCCCEECCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCE
T ss_conf             999998626456503313678513567898862---46554005887689999998503588736455788898728988


Q ss_pred             EEEC-CCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             2540-577410000102467610230244078426124205489899999999984498999999999999999838999
Q gi|254780767|r  290 VSIY-KSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKK  368 (383)
Q Consensus       290 IV~Y-k~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~  368 (383)
                      |++= ++-|-..     +....+-+               -..+.+.|.+++.++++++..++.+.    +...-.| .|
T Consensus       330 Inir~~ter~e~-----v~~~~~il---------------v~~d~~~I~~ai~~~l~~~~~~~~~~----~~~npYG-dG  384 (396)
T 3dzc_A          330 LVMRETTERPEA-----VAAGTVKL---------------VGTNQQQICDALSLLLTDPQAYQAMS----QAHNPYG-DG  384 (396)
T ss_dssp             EECCSSCSCHHH-----HHHTSEEE---------------CTTCHHHHHHHHHHHHHCHHHHHHHH----TSCCTTC-CS
T ss_pred             EECCCCCCCCCC-----CCCCCEEE---------------CCCCHHHHHHHHHHHHCCHHHHHHCC----CCCCCCC-CC
T ss_conf             965776657102-----01780697---------------78999999999999963988886305----4789897-98


Q ss_pred             CHHHHHHHHHH
Q ss_conf             98999999999
Q gi|254780767|r  369 PAGHMAAEIVL  379 (383)
Q Consensus       369 ~a~~~AA~~I~  379 (383)
                      .|+++.++++.
T Consensus       385 ~as~rIv~iL~  395 (396)
T 3dzc_A          385 KACQRIADILA  395 (396)
T ss_dssp             CHHHHHHHHHH
T ss_pred             HHHHHHHHHHC
T ss_conf             59999999963


No 24 
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.18  E-value=2.6e-08  Score=73.42  Aligned_cols=337  Identities=10%  Similarity=0.016  Sum_probs=148.4

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEE-------CHHHCCEEEHHHHHHHHHHH
Q ss_conf             45999976821478999-99999997389983999971--7899947880650-------44453110136746645999
Q gi|254780767|r    4 LKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLF-------DFSELSVIGIMQVVRHLPQF   73 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~-------~~~~l~v~G~~evl~~~~~~   73 (383)
                      |||+|.++.+-||++.. .|.++|+++ +.++.|.+-+  .+..++.|++.+-       ........+..+....+...
T Consensus         1 M~il~~~~gt~Ghv~P~lala~~L~~~-Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (415)
T 1iir_A            1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEA   79 (415)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             979998898646899999999999987-9989999583077789877985998786155453024620089999999999


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCC----------CCCCCCCCH-----HH---
Q ss_conf             999999986100128886898511776579999866301346311110022----------110036635-----57---
Q gi|254780767|r   74 IFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPS----------VWAWREGRA-----RK---  135 (383)
Q Consensus        74 ~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~Pq----------vWAWr~~R~-----k~---  135 (383)
                      .....+..... ...+|.+|. |.-.++...+..+... .++|.+......          .+.+...+.     ..   
T Consensus        80 ~~~~~~~l~~~-~~~~~~~v~-~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (415)
T 1iir_A           80 IATQFDEIPAA-AEGCAAVVT-TGLLAAAIGVRSVAEK-LGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWE  156 (415)
T ss_dssp             HHHHHHHHHHH-TTTCSEEEE-ESCHHHHHHHHHHHHH-HTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHH
T ss_pred             HHHHHHHHHHH-HCCCCEEEE-ECCCHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99999999987-447995999-0544137699999999-39984035577533332224553334554320111024555


Q ss_pred             ---------HHHHHHHH---CC------------------CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf             ---------99999864---01------------------5677422320025531476388211221001355888976
Q gi|254780767|r  136 ---------MCAYINQV---IS------------------ILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQ  185 (383)
Q Consensus       136 ---------~~~~~d~~---~~------------------ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~  185 (383)
                               +....+..   +.                  ....+...... ...+..++|-.........  ...... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~~~--~~~~~~-  232 (415)
T 1iir_A          157 RNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQP-TDLDAVQTGAWILPDERPL--SPELAA-  232 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCC-CSSCCEECCCCCCCCCCCC--CHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC--CHHHHH-
T ss_conf             433456665435677899984786310133311354200225633367777-6655540167556765547--888986-


Q ss_pred             CCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE-ECCCCHHH
Q ss_conf             18765565059985387430123051118999876402735126201663368899999960488850552-05520357
Q gi|254780767|r  186 RNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIII-DKEQKKQV  264 (383)
Q Consensus       186 ~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~  264 (383)
                       .++.....|.+--||... -...   +...+..+.+........... ...+        ......++.+ ..-+..++
T Consensus       233 -~~~~~~~~v~~~~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~~-~~~~--------~~~~~~~v~~~~~~p~~~l  298 (415)
T 1iir_A          233 -FLDAGPPPVYLGFGSLGA-PADA---VRVAIDAIRAHGRRVILSRGW-ADLV--------LPDDGADCFAIGEVNHQVL  298 (415)
T ss_dssp             -HHHTSSCCEEEECC---C-CHHH---HHHHHHHHHHTTCCEEECTTC-TTCC--------CSSCGGGEEECSSCCHHHH
T ss_pred             -HHCCCCCEEEEECCCCCC-CHHH---HHHHHHHHHHHCEEEEEECCC-CCCC--------CCCCCCCEEEEECCCHHHH
T ss_conf             -323389769995686567-5589---999999987514234663256-6555--------5568998899711688999


Q ss_pred             HHHHHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHH
Q ss_conf             8876355233115668-887627530254057741000010246761023024407842612420548989999999998
Q gi|254780767|r  265 FMTCNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERL  343 (383)
Q Consensus       265 l~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~l  343 (383)
                      |..+++.|+-.|..|+ |++..|+|+|++-... =.....+.+.-.-+|+.        ++   ++++|++.+++++..+
T Consensus       299 L~~~~~~I~hgG~~s~~Eal~~GvP~l~~P~~~-dQ~~nA~~~~~~G~g~~--------l~---~~~~t~~~l~~ai~~l  366 (415)
T 1iir_A          299 FGRVAAVIHHGGAGTTHVAARAGAPQILLPQMA-DQPYYAGRVAELGVGVA--------HD---GPIPTFDSLSAALATA  366 (415)
T ss_dssp             GGGSSEEEECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEE--------CS---SSSCCHHHHHHHHHHH
T ss_pred             HHHCCEEEEECCHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCEEE--------CC---CCCCCHHHHHHHHHHH
T ss_conf             742699999467289999998499999806724-48999999998798886--------88---3689999999999999


Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             44989999999999999998389999899999999986
Q gi|254780767|r  344 SQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQV  381 (383)
Q Consensus       344 l~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~  381 (383)
                      ++| ++|+    +.+++.+++...+ +.+ +|+.|.+.
T Consensus       367 l~d-~~r~----~a~~~~~~~~~~~-~~~-~a~~~~e~  397 (415)
T 1iir_A          367 LTP-ETHA----RATAVAGTIRTDG-AAV-AARLLLDA  397 (415)
T ss_dssp             TSH-HHHH----HHHHHHHHSCSCH-HHH-HHHHHHHH
T ss_pred             HCH-HHHH----HHHHHHHHHHHCC-HHH-HHHHHHHH
T ss_conf             798-9999----9999999987508-899-99999999


No 25 
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.16  E-value=1.9e-10  Score=87.44  Aligned_cols=337  Identities=17%  Similarity=0.168  Sum_probs=165.9

Q ss_pred             CEEEEEECCC---CH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             4599997682---14-7899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    4 LKIAVIAGEI---SG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         4 mki~i~aGE~---SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |||.+++..+   || ..+...|+++|.+  +.++.+++....     |.......+...+.... -...........+.
T Consensus         1 MKIl~i~~~~~~~~G~~~~~~~l~~~L~~--~heV~v~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   72 (413)
T 3oy2_A            1 MKLIIVGAHSSVPSGYGRVMRAIVPRISK--AHEVIVFGIHAF-----GRSVHANIEEFDAQTAE-HVRGLNEQGFYYSG   72 (413)
T ss_dssp             CEEEEEEECTTCCSHHHHHHHHHHHHHTT--TSEEEEEEESCC-----SCCSCSSSEEEEHHHHH-HHTTCCSTTCCHHH
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEECCCC-----CCCCCCCCCEEECCCCC-CCCCCCCCHHHHHH
T ss_conf             94899889999988399999999999865--898999975788-----86556676244133335-43435642469999


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC-CCHHHHHHHHHHHCCCCCCCHHHHHCCC
Q ss_conf             986100128886898511776579999866301346311110022110036-6355799999864015677422320025
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWRE-GRARKMCAYINQVISILPFEKEVMQRLG  158 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~-~R~k~~~~~~d~~~~ifpFE~~~f~k~~  158 (383)
                      +.+.++..+||+++....+.+...+...+.+....++...+.....+.+.. ...+...+.+|.+++.-.+....+.+..
T Consensus        73 l~~~i~~~~pDiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~  152 (413)
T 3oy2_A           73 LSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYG  152 (413)
T ss_dssp             HHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTTEEEEEESSTHHHHHHHHTT
T ss_pred             HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHC
T ss_conf             99999985999999937617778999987532574379984366430024789999999757999987899999999738


Q ss_pred             -CCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCH
Q ss_conf             -5314763882112210013558889761876556505998538743012305111899987640273512620166336
Q gi|254780767|r  159 -GPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQ  237 (383)
Q Consensus       159 -~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~  237 (383)
                       ..+...+.|..-....   .........+. .....+....| |.. -.+..+.++.+...+.+..+.....+......
T Consensus       153 ~~~~~~~i~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~k~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  226 (413)
T 3oy2_A          153 CKVPINIVSHFVDTKTI---YDARKLVGLSE-YNDDVLFLNMN-RNT-ARKRLDIYVLAAARFISKYPDAKVRFLCNSHH  226 (413)
T ss_dssp             CCSCEEECCCCCCCCCC---TTHHHHTTCGG-GTTSEEEECCS-CSS-GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCC---CCHHHHHHCCC-CCCCEEEEEEE-CCC-CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             89877995588671004---73245552366-77847998742-254-23598999999999986476653257852576


Q ss_pred             ------HHHHHHHHHHC-------CCCCEEEE----ECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCC
Q ss_conf             ------88999999604-------88850552----0552035788763552331-----15668887627530254057
Q gi|254780767|r  238 ------ENLVRCIVSKW-------DISPEIII----DKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKS  295 (383)
Q Consensus       238 ------~~~~~~~~~~~-------~~~~~i~~----~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~  295 (383)
                            ...........       .....+..    ..++..++++.||+.+.+|     |.+.+|++.+|+|.| +...
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~l~~~~~~ad~~v~ps~~E~f~~~~~Eama~g~PvI-~s~~  305 (413)
T 3oy2_A          227 ESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLI-ISAV  305 (413)
T ss_dssp             TCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEE-EECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCCEE-ECCC
T ss_conf             421025667889998755667650578779938979999999999987652210021012234999998299899-8689


Q ss_pred             CCCEEEEE----ECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             74100001----024676102302440784261242054898999999999844989999999999999
Q gi|254780767|r  296 EWIVNFFI----FYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENL  360 (383)
Q Consensus       296 ~~lt~~i~----~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~  360 (383)
                      +.+...+.    .++.......    ....-....+....+++.+++.+ +++.|++.|++|-++.++.
T Consensus       306 gg~~eii~~~~g~lv~p~~~~~----~~~~~~~g~~~~~~d~~~la~~i-~l~~d~~~~~~~~~~ar~~  369 (413)
T 3oy2_A          306 GGADDYFSGDCVYKIKPSAWIS----VDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDF  369 (413)
T ss_dssp             HHHHHHSCTTTSEEECCCEEEE----CTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred             CCHHHHCCCCCEEEECCCCCCC----CCCCCCCCCCCCCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHH
T ss_conf             9707650498348968874222----22223445322569999999999-9835999999999999999


No 26 
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.09  E-value=3.9e-09  Score=78.81  Aligned_cols=243  Identities=12%  Similarity=0.081  Sum_probs=120.2

Q ss_pred             CEEEEEE-CCCC---HHHHHH-HHHHHHHHHCCCCEEEEEEC--CHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHH
Q ss_conf             4599997-6821---478999-99999997389983999971--789994788065044453110136746645999999
Q gi|254780767|r    4 LKIAVIA-GEIS---GDLLAG-DLIKSLKEMVSYPINLVGVG--GPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFR   76 (383)
Q Consensus         4 mki~i~a-GE~S---GD~~~a-~li~~Lk~~~~~~~~~~giG--G~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~   76 (383)
                      |||++.| |..+   |++..+ .|+++|+     +..|...+  +......+...    ..++..+              
T Consensus         1 MkIl~~~~~~~~~G~GHi~r~l~La~~l~-----~~~f~~~~~~~~~~~~~~~~~----~~~~~~~--------------   57 (282)
T 3hbm_A            1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS-----DVSFACLPLEGSLIDEIPYPV----YELSSES--------------   57 (282)
T ss_dssp             CCEEEEECCBTTTBSHHHHHHHHHHTTCS-----SEEEEECCCTTCCGGGCCSCE----EECSSSC--------------
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHHH-----HCCEEEEECCCCHHHHCCCCE----EEECCHH--------------
T ss_conf             97999954889836015899999999874-----587999986420165749976----8844220--------------


Q ss_pred             HHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHC
Q ss_conf             99998610012888689851177657999986630134631111002211003663557999998640156774223200
Q gi|254780767|r   77 INQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQR  156 (383)
Q Consensus        77 ~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k  156 (383)
                      ..+....++..+||++|. |...++....+..+.. .+.+++....+..+.|...-          +..........+..
T Consensus        58 ~~~~~~~~~~~~~~~ii~-d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~  125 (282)
T 3hbm_A           58 IYELINLIKEEKFELLII-DHYGISVDDEKLIKLE-TGVKILSFDDEIKPHHCDIL----------LNVNAYAKASDYEG  125 (282)
T ss_dssp             HHHHHHHHHHHTCSEEEE-ECTTCCHHHHHHHHHH-HCCEEEEECSSCCCCCCSEE----------EECSTTCCGGGGTT
T ss_pred             HHHHHHHHHCCCCCEEEE-CCCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHH----------HHHCHHHHHHHHHH
T ss_conf             888888876239999999-2897684999999864-79717884153123323202----------34010356655542


Q ss_pred             C-CCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf             2-553147638821122100135588897618765565059985387430123051118999876402735126201663
Q gi|254780767|r  157 L-GGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVS  235 (383)
Q Consensus       157 ~-~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~  235 (383)
                      . ......++|.+....     .................+.+..|+..++..     .+......... ......+....
T Consensus       126 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~  194 (282)
T 3hbm_A          126 LVPFKCEVRCGFSYALI-----REEFYQEAKENRKKKYDFFICMGGTDIKNL-----SLQIASELPKT-KIISIATSSSN  194 (282)
T ss_dssp             TCC-CCEEEESGGGCCC-----CHHHHHHTTCCCCCCEEEEEECCSCCTTCH-----HHHHHHHSCTT-SCEEEEECTTC
T ss_pred             CCCCCCEEECCCCCCCC-----CHHHHHHHHCCCCCCEEEEEEECCCCCHHH-----HHHHHHHHHHH-HCCCCEEECCH
T ss_conf             17755267225410001-----055542110124454013785147660144-----45556665543-20221010202


Q ss_pred             CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEC
Q ss_conf             3688999999604888505520552035788763552331156688876275302540
Q gi|254780767|r  236 SQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIY  293 (383)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Y  293 (383)
                      .... ..........+..+....++..+.|..||++|+++|+.+.|++.+|+|++++.
T Consensus       195 ~~~~-~~~~~~~~~~nv~~~~~~~~~~~~~~~ad~vI~~gG~T~~E~~~~g~P~i~ip  251 (282)
T 3hbm_A          195 PNLK-KLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISASSLVNEALLLKANFKAIC  251 (282)
T ss_dssp             TTHH-HHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESSHHHHHHHHTTCCEEEEC
T ss_pred             HHHH-HHHHCCCCCCEEEECCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEE
T ss_conf             4443-11000145631898357561999998689999888648999999599989997


No 27 
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A*
Probab=98.85  E-value=7.2e-06  Score=57.24  Aligned_cols=354  Identities=10%  Similarity=0.006  Sum_probs=156.7

Q ss_pred             CEEEEEECCCCHHHHH-HHHHHHHHHHCCCCEEEEEECCHHHHHCC----CEEEECH-----------HHCCEEEHHHHH
Q ss_conf             4599997682147899-99999999738998399997178999478----8065044-----------453110136746
Q gi|254780767|r    4 LKIAVIAGEISGDLLA-GDLIKSLKEMVSYPINLVGVGGPSLQKEG----LVSLFDF-----------SELSVIGIMQVV   67 (383)
Q Consensus         4 mki~i~aGE~SGD~~~-a~li~~Lk~~~~~~~~~~giGG~~m~~~G----~~~~~~~-----------~~l~v~G~~evl   67 (383)
                      +.|++.+=-..|++.. ..|.++|.++ ++++.+..+..+......    .+..-++           ...+.....+.+
T Consensus        14 ~Hv~~~p~P~~gH~~P~l~la~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   92 (454)
T 3hbf_A           14 LHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNPREPI   92 (454)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCTTHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH
T ss_conf             628896873174899999999999978-9957999804764225555314556899717667889997544446757899


Q ss_pred             HHHH-HHHHHHHHHHH---HCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECC--------------------
Q ss_conf             6459-99999999986---10012888689851177657999986630134631111002--------------------
Q gi|254780767|r   68 RHLP-QFIFRINQTVE---LIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCP--------------------  123 (383)
Q Consensus        68 ~~~~-~~~~~~~~~~~---~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~P--------------------  123 (383)
                      ..+. .......+..+   .....++|++|.--+..+.+-+|.++     ++|.+.++..                    
T Consensus        93 ~~~~~~~~~~~~~~l~~~~~~~~~~~d~vi~d~~~~~~~~~a~~~-----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (454)
T 3hbf_A           93 FLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEM-----HAKWVPLWTAGPHSLLTHVYTDLIREKTGS  167 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHT-----TCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH-----CCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf             999999887579999999972599975999747316899999996-----898599724736888887621101334564


Q ss_pred             -------------CCCCCC---------CCCHHHHHHHH----HHHCCCCC--------CCH--HHHHCCCCCCEEECCC
Q ss_conf             -------------211003---------66355799999----86401567--------742--2320025531476388
Q gi|254780767|r  124 -------------SVWAWR---------EGRARKMCAYI----NQVISILP--------FEK--EVMQRLGGPPTTFVGH  167 (383)
Q Consensus       124 -------------qvWAWr---------~~R~k~~~~~~----d~~~~ifp--------FE~--~~f~k~~~~~~~fVGH  167 (383)
                                   ..+.+.         ...-..+.++.    ..+-..+.        .+.  ..+-....-+..++|.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  247 (454)
T 3hbf_A          168 KEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGP  247 (454)
T ss_dssp             HHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCC
T ss_pred             CCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHCCCCCEEECCC
T ss_conf             44466411110467750346656431147632589999999997511123321363776453666554303443011355


Q ss_pred             CCCCCCCCC-CCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             211221001-3558889761876556505998538743012305111899987640273512620166336889999996
Q gi|254780767|r  168 PLSSSPSIL-EVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVS  246 (383)
Q Consensus       168 Pl~d~~~~~-~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (383)
                      ......... ....+....+.-.++.+.|.+--||...--......+.++...+..   ...+.+.. ......-.....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~s~Gs~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~-~~~~~~p~~~~~  323 (454)
T 3hbf_A          248 FNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGF---PFIWSFRG-DPKEKLPKGFLE  323 (454)
T ss_dssp             HHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCC---CEEEECCS-CHHHHSCTTHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC---CEEEEEEC-CCCCCCCHHHHH
T ss_conf             43468853334625554577608986236660366544668899999999986588---55999956-853459713555


Q ss_pred             HCCCCCEEEEECCCCHHHHHH--HHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEE-ECCCCCCEEEEHHHCCCCC
Q ss_conf             048885055205520357887--6355233115668-88762753025405774100001-0246761023024407842
Q gi|254780767|r  247 KWDISPEIIIDKEQKKQVFMT--CNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFI-FYIKTWTCALPNLIVDYPL  322 (383)
Q Consensus       247 ~~~~~~~i~~~~~~~~~~l~~--sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~-~lik~~~i~LpNii~~~~i  322 (383)
                      ....+.. ....-...++|.+  +++.|+-.|..|. |+...|+|||++--.. =..... |.....-+|.       .+
T Consensus       324 ~~~~n~~-~~~~~Pq~~iL~hp~~~~fItHGG~gs~~EAl~~GvP~v~~P~~~-DQ~~na~rv~~~~G~G~-------~l  394 (454)
T 3hbf_A          324 RTKTKGK-IVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFG-DQGLNTILTESVLEIGV-------GV  394 (454)
T ss_dssp             HTTTTEE-EESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHTTSCSEE-------EC
T ss_pred             HCCCCEE-EEECCCHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCEEECCCCC-CCHHHHHHHHHHHCEEE-------EC
T ss_conf             2255336-983062688861653028986066553899998699989467210-14899999999748479-------70


Q ss_pred             CCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHH
Q ss_conf             6124205489899999999984498999999999999999838---9999899999999986
Q gi|254780767|r  323 VPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMN---TKKPAGHMAAEIVLQV  381 (383)
Q Consensus       323 vPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg---~~~~a~~~AA~~I~~~  381 (383)
                      =+    +++|++.|..++.++|+|+..+ ..+++.+++++...   ++|.+|....+.+.+.
T Consensus       395 ~~----~~~t~~~l~~av~~vL~d~~~~-~yr~~a~~l~~~~~~Av~~ggss~~~~~~~~~~  451 (454)
T 3hbf_A          395 DN----GVLTKESIKKALELTMSSEKGG-IMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQI  451 (454)
T ss_dssp             GG----GSCCHHHHHHHHHHHHSSHHHH-HHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred             CC----CCCCHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             38----9708999999999996695489-999999999999999850798589999999998


No 28 
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.69  E-value=9.1e-06  Score=56.59  Aligned_cols=159  Identities=11%  Similarity=0.011  Sum_probs=93.8

Q ss_pred             HHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCC-------------H---HHHHHHHHHH
Q ss_conf             76187655650599853874301230511189998764027351262016633-------------6---8899999960
Q gi|254780767|r  184 KQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSS-------------Q---ENLVRCIVSK  247 (383)
Q Consensus       184 ~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~-------------~---~~~~~~~~~~  247 (383)
                      ...+....+..+.+..| |-.+ .+..+.+++++..+.+..++..+++.....             .   ...+......
T Consensus       253 ~~~~~~~~~~~~il~~G-rl~~-~kg~~~li~a~~~~~~~~~~~~l~lvg~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~  330 (499)
T 2r60_A          253 RDLGSERMELPAIIASS-RLDQ-KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDN  330 (499)
T ss_dssp             HHSCGGGTTSCEEEECS-CCCG-GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCEEEEEEC-CCCC-CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             54046676875999960-4564-332899999999988638995399998148875156777668889999999987640


Q ss_pred             CCCCCEEEEECCC--------CHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEE
Q ss_conf             4888505520552--------035788763552331-----156688876275302540577410000102467610230
Q gi|254780767|r  248 WDISPEIIIDKEQ--------KKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALP  314 (383)
Q Consensus       248 ~~~~~~i~~~~~~--------~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~Lp  314 (383)
                      .+....+......        ...++..+|+.+..|     |.+.+|++.+|+|.| ++.++.+..              
T Consensus       331 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~a~~~v~pS~~e~~~~~~lEAma~G~PVI-~s~~gg~~e--------------  395 (499)
T 2r60_A          331 NDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAV-VTRNGGPAE--------------  395 (499)
T ss_dssp             TTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEE-EESSBHHHH--------------
T ss_pred             CCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEE-ECCCCCHHH--------------
T ss_conf             15555134227531344466799999855710157401364457999998799899-917998799--------------


Q ss_pred             HHHCCCC---CCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHC
Q ss_conf             2440784---2612420548989999999998449899999999999-9999838
Q gi|254780767|r  315 NLIVDYP---LVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFE-NLWDRMN  365 (383)
Q Consensus       315 Nii~~~~---ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~-~~~~~Lg  365 (383)
                       ++.+.+   ++     +..+++.+++++.++++|++.+++|.++.. .+.++..
T Consensus       396 -~v~~g~~G~lv-----~~~d~~~la~ai~~ll~d~~~~~~~~~~ar~~~~~~fs  444 (499)
T 2r60_A          396 -ILDGGKYGVLV-----DPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYT  444 (499)
T ss_dssp             -HTGGGTSSEEE-----CTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSB
T ss_pred             -HHCCCCEEEEE-----CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             -96489749997-----89999999999999987999999999999999998699


No 29 
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen synthase two rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.67  E-value=3.1e-07  Score=66.30  Aligned_cols=181  Identities=14%  Similarity=0.070  Sum_probs=109.7

Q ss_pred             CCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHC--CCCCEEEECCCC
Q ss_conf             553147638821122100135588897618765565059985387430123051118999876402--735126201663
Q gi|254780767|r  158 GGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKR--NPFFRFSLVTVS  235 (383)
Q Consensus       158 ~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~--~~~~~~~i~~~~  235 (383)
                      +|+++.+. +|-.......+.+...++++++++ ++ +.++-| |-.+-++....+++++..+.++  +++++|++....
T Consensus         4 NGvD~~~f-~p~~~~~~~~~~~~~~~~~~~~~~-~~-~il~vG-rl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~ivG~~   79 (200)
T 2bfw_A            4 NGIDCSFW-NESYLTGSRDERKKSLLSKFGMDE-GV-TFMFIG-RFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             -CCCTTTS-SGGGSCSCHHHHHHHHHHHTTCCS-CE-EEEEES-CBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCEEHHHC-CCCCCCCCHHHHHHHHHHHHCCCC-CC-EEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             97618771-997776115799999999949899-97-899991-788241698999999998886377998699998369


Q ss_pred             C--HHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECC
Q ss_conf             3--6889999996048885055--20552035788763552331-----1566888762753025405774100001024
Q gi|254780767|r  236 S--QENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYI  306 (383)
Q Consensus       236 ~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~li  306 (383)
                      .  .+...+...........+.  ...++..++++.||+.+.+|     |.+.+|++.+|+|.| ++..+.....    +
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~ps~~E~~~~~~~EAma~G~pvi-~~~~~g~~e~----i  154 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI-ASAVGGLRDI----I  154 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEE-EESCHHHHHH----C
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHCCCCEE-EECCCCCCEE----E
T ss_conf             7899999999998689938998307989999987504762405676789868999998898499-9649987147----8


Q ss_pred             CCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Q ss_conf             676102302440784261242054898999999999844-9899999999999999
Q gi|254780767|r  307 KTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQ-DTLQRRAMLHGFENLW  361 (383)
Q Consensus       307 k~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~-d~~~r~~~~~~~~~~~  361 (383)
                      +-.. |            .++ +.-+++.+++.+..+++ |++.++++.++.++-.
T Consensus       155 ~~~~-g------------~l~-~~~~~~~la~~i~~~l~~~~~~~~~~~~~a~~~a  196 (200)
T 2bfw_A          155 TNET-G------------ILV-KAGDPGELANAILKALELSRSDLSKFRENCKKRA  196 (200)
T ss_dssp             CTTT-C------------EEE-CTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred             ECCC-E------------EEE-CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             5885-7------------997-7999999999999999579999999999999999


No 30 
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=98.65  E-value=6.7e-06  Score=57.45  Aligned_cols=180  Identities=11%  Similarity=0.041  Sum_probs=89.2

Q ss_pred             HCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCC---HHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             6187655650599853874301230511189998764027351262016633---6889999996048885055205520
Q gi|254780767|r  185 QRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSS---QENLVRCIVSKWDISPEIIIDKEQK  261 (383)
Q Consensus       185 ~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~  261 (383)
                      ..........+.+..||-...-....   .+.+..+......+.+++-....   ..............+..+.. ....
T Consensus       288 ~~~~~~~~~vv~~~~gs~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~-w~pq  363 (482)
T 2pq6_A          288 WLESKEPGSVVYVNFGSTTVMTPEQL---LEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIAS-WCPQ  363 (482)
T ss_dssp             HHTTSCTTCEEEEECCSSSCCCHHHH---HHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEES-CCCH
T ss_pred             HHHHCCCCCEEEECCCCCCCCCHHHH---HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEE-CCCH
T ss_conf             87506777413321442002573899---9999998743677689972466666422374011210444522873-3877


Q ss_pred             HHHH--HHHHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEEC-CCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHH
Q ss_conf             3578--876355233115668-8876275302540577410000102-46761023024407842612420548989999
Q gi|254780767|r  262 KQVF--MTCNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFY-IKTWTCALPNLIVDYPLVPEYFNSMIRSEALV  337 (383)
Q Consensus       262 ~~~l--~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~l-ik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~  337 (383)
                      .+++  ..+++.|+-.|-.|. |+...|+|||++--. .=.....+. ....-+|+-            +..++|+++|.
T Consensus       364 ~~~L~hp~~~~fVtHGG~~S~~EAl~~GVP~vv~P~~-~DQ~~na~rv~~~lG~G~~------------l~~~~t~~~l~  430 (482)
T 2pq6_A          364 DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF-ADQPTDCRFICNEWEIGME------------IDTNVKREELA  430 (482)
T ss_dssp             HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHHTSCCEEE------------CCSSCCHHHHH
T ss_pred             HHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEECCCC-CCCHHHHHHHHHHHCEEEE------------ECCCCCHHHHH
T ss_conf             8985687758798568721799999859998956650-0038899999997162698------------58988999999


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHC---CCCCHHHH-HHHHHHHHC
Q ss_conf             9999984498999999999999999838---99998999-999999861
Q gi|254780767|r  338 RWIERLSQDTLQRRAMLHGFENLWDRMN---TKKPAGHM-AAEIVLQVL  382 (383)
Q Consensus       338 ~~~~~ll~d~~~r~~~~~~~~~~~~~Lg---~~~~a~~~-AA~~I~~~L  382 (383)
                      +++.+++.|++. ++++++.+++++++.   .+|+++++ .++.|.++|
T Consensus       431 ~ai~~vl~d~~~-~~yr~~a~~l~~~~~~a~~~~G~s~~~~~~~v~~~~  478 (482)
T 2pq6_A          431 KLINEVIAGDKG-KKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL  478 (482)
T ss_dssp             HHHHHHHTSHHH-HHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             999999769728-999999999999999986279948999999999998


No 31 
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=98.53  E-value=1.2e-06  Score=62.34  Aligned_cols=301  Identities=9%  Similarity=0.034  Sum_probs=146.6

Q ss_pred             CEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHC-----CCEEEECHHHCCEEEHHHHHHHHHHHHHHH
Q ss_conf             459999768214789-99999999973899839999717899947-----880650444531101367466459999999
Q gi|254780767|r    4 LKIAVIAGEISGDLL-AGDLIKSLKEMVSYPINLVGVGGPSLQKE-----GLVSLFDFSELSVIGIMQVVRHLPQFIFRI   77 (383)
Q Consensus         4 mki~i~aGE~SGD~~-~a~li~~Lk~~~~~~~~~~giGG~~m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~~~~~~   77 (383)
                      |||+|+.-..=||+. ...++++||+.+| +.++.-++.+..++.     .++.++....-   . +.-......++...
T Consensus         1 MKILiir~~~iGD~i~~~p~i~~Lk~~~P-~a~I~~l~~~~~~~l~~~~p~id~v~~~~~~---~-~~~~~~~~~~~~~~   75 (326)
T 2gt1_A            1 MRVLIVKTSSMGDVLHTLPALTDAQQAIP-GIKFDWVVEEGFAQIPSWHAAVERVIPVAIR---R-WRKAWFSAPIKAER   75 (326)
T ss_dssp             CEEEEECCCCHHHHHHHHHHHHHHHHHST-TCEEEEEEEGGGTHHHHTSTTEEEEEEECHH---H-HHTTTTSHHHHHHH
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECHHHHHHHHHCCCCCEEEEECCC---C-CCCCCCCCHHHHHH
T ss_conf             97999928980899999999999998789-9989999897589998519983589996640---0-02344421368999


Q ss_pred             HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCC---C--CC-----CCCHHHHHHHHHHHCCCC
Q ss_conf             9998610012888689851177657999986630134631111002211---0--03-----663557999998640156
Q gi|254780767|r   78 NQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVW---A--WR-----EGRARKMCAYINQVISIL  147 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvW---A--Wr-----~~R~k~~~~~~d~~~~if  147 (383)
                      ..+.+.++..++|++|-.+.   +.+.+........+.+..+.-.-.-|   .  +.     ..+.....++.+.+...+
T Consensus        76 ~~~~~~l~~~~~d~~i~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  152 (326)
T 2gt1_A           76 KAFREALQAKNYDAVIDAQG---LVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSL  152 (326)
T ss_dssp             HHHHHHHHHSBCSEEEECSC---CHHHHHHTGGGSBSCEEEECTTTSSSGGGGGGCSEEECCCSSSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEECCC---CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99999971468888998864---067789999863021012354423442101012444454103779999988653203


Q ss_pred             CCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCC--CHHHHHHHHHHCCC
Q ss_conf             7742232002553147638821122100135588897618765565059985387430123051--11899987640273
Q gi|254780767|r  148 PFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILP--FFESAVASLVKRNP  225 (383)
Q Consensus       148 pFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP--~~l~~~~~l~~~~~  225 (383)
                      +.                  +.................... ...+.+.+.||+....  +.+|  .+.+.++.+.++.+
T Consensus       153 ~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~iv~~~~~~~~~--k~wp~~~~~~l~~~l~~~~~  211 (326)
T 2gt1_A          153 GY------------------SKPQTQGDYAIAQHFLTNLPT-DAGEYAVFLHATTRDD--KHWPEEHWRELIGLLADSGI  211 (326)
T ss_dssp             TC------------------CCCSSCCCCCCHHHHHTTCCT-TTTSEEEEECCCSSGG--GSCCHHHHHHHHHHTTTTCC
T ss_pred             CC------------------CCCCCCHHHHHHHHHHHHCCC-CCCCEEEEECCCCCCC--CCCCHHHHHHHHHHHHHCCC
T ss_conf             55------------------666640215666899874544-6687599933666776--77999999999999986288


Q ss_pred             CCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCC-HHHHHHHHHHCCCEEEECCC-CCCEEE
Q ss_conf             512620166336889999996048885055--20552035788763552331-15668887627530254057-741000
Q gi|254780767|r  226 FFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAAS-GTVILELALCGIPVVSIYKS-EWIVNF  301 (383)
Q Consensus       226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~S-GTaTLE~al~g~P~IV~Yk~-~~lt~~  301 (383)
                      .. +++...++.++..+......+ ..++.  ..-.+.-.+++.||+.|+.. |.+. =++++|+|+|++|-. ++-.|.
T Consensus       212 ~~-~l~~g~~~e~~~~~~i~~~~~-~i~l~~~~sl~el~~li~~a~l~I~~Dtg~~H-lAaa~~~p~i~lfg~t~p~~~~  288 (326)
T 2gt1_A          212 RI-KLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAKFVVSVDTGLSH-LTAALDRPNITVYGPTDPGLIG  288 (326)
T ss_dssp             EE-EECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCSEEEEESSHHHH-HHHHTTCCEEEEESSSCHHHHC
T ss_pred             CC-CCCCCCHHHHHHHHHHHHCCC-EEEECCCCCHHHHHHHHHCCCEEEECCCHHHH-HHHHCCCCEEEEECCCCHHHHC
T ss_conf             52-014687788999999863355-16632752178999999659799989875999-9998699989998899998708


Q ss_pred             EEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf             0102467610230244078426124205489899999999984498
Q gi|254780767|r  302 FIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDT  347 (383)
Q Consensus       302 i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~  347 (383)
                      -   ......    ++...    .-=-.+.+++.+.+.+.+.++..
T Consensus       289 P---~~~~~~----~~~~~----~~~~~~i~~~~V~~~~~~~l~~~  323 (326)
T 2gt1_A          289 G---YGKNQM----VCRAP----GNELSQLTANAVKQFIEENAEKA  323 (326)
T ss_dssp             C---CSSSEE----EEECG----GGCGGGCCHHHHHHHHHHTTTTC
T ss_pred             C---CCCCEE----EEECC----CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             8---999879----99899----97604599999999999998873


No 32 
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=98.49  E-value=9.5e-05  Score=49.87  Aligned_cols=177  Identities=10%  Similarity=0.036  Sum_probs=83.9

Q ss_pred             HCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHH
Q ss_conf             61876556505998538743012305111899987640273512620166336889999996048885055205520357
Q gi|254780767|r  185 QRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDKEQKKQV  264 (383)
Q Consensus       185 ~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (383)
                      .+........+.+.-||...-.......+..+....   .......+.... ....-.....+...+..+.. .....+.
T Consensus       264 ~l~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~l~~~~~~~~~~~v~~~~-~~pq~~~  338 (456)
T 2c1x_A          264 WLKERKPTSVVYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKA-RVHLPEGFLEKTRGYGMVVP-WAPQAEV  338 (456)
T ss_dssp             HHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGG-GGGSCTTHHHHHTTTEEEES-CCCHHHH
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEEEECCC-CCCCCHHHHHCCCCCCCCCC-CCCCHHH
T ss_conf             676404554303541233221035899999999844---775489991576-46686455421111123552-4683687


Q ss_pred             H--HHHHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECC-CCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHH
Q ss_conf             8--876355233115668-88762753025405774100001024-6761023024407842612420548989999999
Q gi|254780767|r  265 F--MTCNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYI-KTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWI  340 (383)
Q Consensus       265 l--~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~li-k~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~  340 (383)
                      +  ..+++.|+-.|..|. |+...|+|||++--.. =.....+.+ ..--+|+.           +=-+++|+++|.+++
T Consensus       339 l~~p~~~~fItHGG~gs~~eal~~GVP~l~~P~~~-DQ~~na~rv~~~lG~G~~-----------l~~~~~t~~~l~~ai  406 (456)
T 2c1x_A          339 LAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFG-DQRLNGRMVEDVLEIGVR-----------IEGGVFTKSGLMSCF  406 (456)
T ss_dssp             HTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHTSCCEEE-----------CGGGSCCHHHHHHHH
T ss_pred             HCCCCCCEEECCCCCCHHHHHHHCCCCEEECCCHH-HHHHHHHHHHHHCCEEEE-----------ECCCCCCHHHHHHHH
T ss_conf             65886255523687447999998599989636422-218999999997083899-----------038983899999999


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHH
Q ss_conf             998449899999999999999983----899998999999999
Q gi|254780767|r  341 ERLSQDTLQRRAMLHGFENLWDRM----NTKKPAGHMAAEIVL  379 (383)
Q Consensus       341 ~~ll~d~~~r~~~~~~~~~~~~~L----g~~~~a~~~AA~~I~  379 (383)
                      .++|+|+.++ ++.++.+++++.+    ..+|++.+.+...|-
T Consensus       407 ~~vL~~~~y~-~~~~ra~~l~~~~~~a~~~~gss~~~~~~~ie  448 (456)
T 2c1x_A          407 DQILSQEKGK-KLRENLRALRETADRAVGPKGSSTENFITLVD  448 (456)
T ss_dssp             HHHHHSHHHH-HHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred             HHHHCCCHHH-HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             9997095899-99999999999999870599878999999999


No 33 
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=98.43  E-value=0.00013  Score=48.93  Aligned_cols=355  Identities=13%  Similarity=0.073  Sum_probs=153.7

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEECCH------------HHHHCCCEE-EECHHHCCE---E---EH
Q ss_conf             45999976821478999-9999999738998399997178------------999478806-504445311---0---13
Q gi|254780767|r    4 LKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVGGP------------SLQKEGLVS-LFDFSELSV---I---GI   63 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giGG~------------~m~~~G~~~-~~~~~~l~v---~---G~   63 (383)
                      +.|.++.=-..||+... .|.++|.++ ++++.+..+..+            ......... ..++.+-..   .   .+
T Consensus        10 ~hi~~~p~P~~GH~~P~l~la~~L~~r-GH~V~vt~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (463)
T 2acv_A           10 SELIFIPAPGIGHLASALEFAKLLTNH-DKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKSP   88 (463)
T ss_dssp             EEEEEECCSSTTTHHHHHHHHHHHHHT-CTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGSH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHCH
T ss_conf             838893875186899999999999977-9985999981786304467752332236789747998898888713333078


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC--------------------
Q ss_conf             67-466459999999999861001288868985117765799998663013463111100--------------------
Q gi|254780767|r   64 MQ-VVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC--------------------  122 (383)
Q Consensus        64 ~e-vl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~--------------------  122 (383)
                      .+ ....+.......+.+.+.+...+||++|.-.+-.+.+.+|..+     ++|.+.+.+                    
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iv~d~~~~~~~~~a~~l-----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (463)
T 2acv_A           89 EFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEF-----GIPSYLFLTSNVGFLSLMLSLKNRQIEEV  163 (463)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHT-----TCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH-----CCCCEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf             9999999999999999999970548986999837118899999994-----89953320542467789987764166676


Q ss_pred             -------------CC---CCCCCCCCH---------HHHHHHHHHH----------------------CCCCCCCHHHHH
Q ss_conf             -------------22---110036635---------5799999864----------------------015677422320
Q gi|254780767|r  123 -------------PS---VWAWREGRA---------RKMCAYINQV----------------------ISILPFEKEVMQ  155 (383)
Q Consensus       123 -------------Pq---vWAWr~~R~---------k~~~~~~d~~----------------------~~ifpFE~~~f~  155 (383)
                                   +.   .|.++....         ....+.....                      ...+++....+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (463)
T 2acv_A          164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYA  243 (463)
T ss_dssp             CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             65446765434564322101333211232044036789999999732044335441766556677664202356786456


Q ss_pred             CCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHH-HCCCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             02553147638821122100135588897618765565059985387430123-05111899987640273512620166
Q gi|254780767|r  156 RLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYK-ILPFFESAVASLVKRNPFFRFSLVTV  234 (383)
Q Consensus       156 k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~-~lP~~l~~~~~l~~~~~~~~~~i~~~  234 (383)
                      .  +..+...|-+....  ......+.............+.+.-|+....+.. .+..+..+...+    + ..+++...
T Consensus       244 ~--~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~  314 (463)
T 2acv_A          244 V--GPLLDLKGQPNPKL--DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS----G-VRFLWSNS  314 (463)
T ss_dssp             C--CCCCCSSCCCBTTB--CHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH----T-CEEEEECC
T ss_pred             C--CCCCCCCCCCCCCC--CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHC----C-CEEEEEEC
T ss_conf             6--87404676555666--66673789999874245530355236531258999999999999863----7-51899834


Q ss_pred             CCHH---HHHHHHHHHCCCCCEEEEECCCC-HHHHHHHHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEE-ECCCC
Q ss_conf             3368---89999996048885055205520-3578876355233115668-88762753025405774100001-02467
Q gi|254780767|r  235 SSQE---NLVRCIVSKWDISPEIIIDKEQK-KQVFMTCNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFI-FYIKT  308 (383)
Q Consensus       235 ~~~~---~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~-~lik~  308 (383)
                      ....   ....... ....+..+.....+. ..++..|++.|+-.|-.|. |+...|+|||++--.. =....+ |++..
T Consensus       315 ~~~~~~~~~~~~~~-~~~~~~~i~~~~pq~~~l~~p~~~~fItHGG~~S~~Eal~~GVPml~~P~~~-DQ~~nA~rlve~  392 (463)
T 2acv_A          315 AEKKVFPEGFLEWM-ELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA-EQQLNAFRLVKE  392 (463)
T ss_dssp             CCGGGSCTTHHHHH-HHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCST-THHHHHHHHHHT
T ss_pred             CCCCCCCCCHHHHH-CCCCCEEEEEECCHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCEEECCCHH-HHHHHHHHHHHH
T ss_conf             76445665314441-3677328997456678863886438999478478999998699989346221-008899999986


Q ss_pred             CCEEEEHHHCCCCCCCHHH--CCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHCC
Q ss_conf             6102302440784261242--054898999999999844-9899999999999999983899998999999-9998619
Q gi|254780767|r  309 WTCALPNLIVDYPLVPEYF--NSMIRSEALVRWIERLSQ-DTLQRRAMLHGFENLWDRMNTKKPAGHMAAE-IVLQVLG  383 (383)
Q Consensus       309 ~~i~LpNii~~~~ivPEli--Q~~~~~~~i~~~~~~ll~-d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~-~I~~~Lg  383 (383)
                      .-+|+-       +-++.-  ...+|++.|.+++.+++. |+.+|++..+--+.+++-... |++|+.+-+ .|.++-|
T Consensus       393 ~g~G~~-------l~~~~~~~~~~~t~~~l~~av~~vl~~~~~~r~~a~~l~~~~r~a~~~-gGss~~~~~~~i~~~~~  463 (463)
T 2acv_A          393 WGVGLG-------LRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVD-GGSSLISVGKLIDDITG  463 (463)
T ss_dssp             SCCEEE-------SCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTST-TSHHHHHHHHHHHHHHC
T ss_pred             CCCEEE-------EECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCCC
T ss_conf             182688-------405321467837699999999999738899999999999999998427-99489999999997039


No 34 
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.23  E-value=1.4e-05  Score=55.37  Aligned_cols=243  Identities=16%  Similarity=0.155  Sum_probs=111.6

Q ss_pred             CCCCEEEEEECCC-----------------CHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEH
Q ss_conf             9874599997682-----------------14789999999999738998399997178999478806504445311013
Q gi|254780767|r    1 MNSLKIAVIAGEI-----------------SGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGI   63 (383)
Q Consensus         1 m~~mki~i~aGE~-----------------SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~   63 (383)
                      |++|||.++...-                 ..+.+...|.++|.++ +.++.+++-+++.-...         .+.+...
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~pP~~~GG~E~~v~~La~~L~~~-GH~V~v~~~~~~~~~~~---------~~~~~~~   70 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL-GHEVFLLGAPGSPAGRP---------GLTVVPA   70 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT-TCEEEEESCTTSCCCST---------TEEECSC
T ss_pred             CCCCEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCC---------CCCCCCC
T ss_conf             9973799976665577777676698999885999999999999976-99899992599876677---------6300684


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             67466459999999999861001288868985117765799998663013463111100221100366355799999864
Q gi|254780767|r   64 MQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQV  143 (383)
Q Consensus        64 ~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~  143 (383)
                      .    .       ..++.+.+++.+||+|.+= ++...+. +   .+ ..++|+++-.--..|.+.+            +
T Consensus        71 ~----~-------~~~l~~~l~~~~~DIVH~h-~~~~~~~-~---~~-~~~~~~v~~~~~~~~~~~~------------~  121 (342)
T 2iuy_A           71 G----E-------PEEIERWLRTADVDVVHDH-SGGVIGP-A---GL-PPGTAFISSHHFTTRPVNP------------V  121 (342)
T ss_dssp             C----S-------HHHHHHHHHHCCCSEEEEC-SSSSSCS-T---TC-CTTCEEEEEECSSSBCSCC------------T
T ss_pred             C----H-------HHHHHHHHHHCCCCEEEEC-CCCHHHH-H---HH-CCCCEEEEECCCCCCCCCH------------H
T ss_conf             3----1-------9999999987799999988-8213579-9---85-5597099952466544223------------5


Q ss_pred             CCCCCCCHH-HHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf             015677422-3200255314763882112210013558889761876556505998538743012305111899987640
Q gi|254780767|r  144 ISILPFEKE-VMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVK  222 (383)
Q Consensus       144 ~~ifpFE~~-~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~  222 (383)
                      .+.+.-+.. .+.. ..-++..+.|++-....  ..      .......++.+ ++-|. -..-+. ...++.+++..  
T Consensus       122 ~~~~~~~~~~~~~~-~~~~~~vI~ngv~~~~~--~~------~~~~~~~~~~i-~~~~~-~~~~k~-~~~li~~~~~~--  187 (342)
T 2iuy_A          122 GCTYSSRAQRAHCG-GGDDAPVIPIPVDPARY--RS------AADQVAKEDFL-LFMGR-VSPHKG-ALEAAAFAHAC--  187 (342)
T ss_dssp             TEEESCHHHHHHTT-CCTTSCBCCCCBCGGGS--CC------STTCCCCCSCE-EEESC-CCGGGT-HHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHC-CCCCEEEECCCCCHHHC--CC------CCCCCCCCCEE-EEEEC-CCCCCC-HHHHHHHHHHC--
T ss_conf             78877999998626-78888998898688877--88------65556778789-99972-230001-35788987623--


Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE--ECCCCHHHHHHHHHHHCC---------------CHHHHHHHHHH
Q ss_conf             2735126201663368899999960488850552--055203578876355233---------------11566888762
Q gi|254780767|r  223 RNPFFRFSLVTVSSQENLVRCIVSKWDISPEIII--DKEQKKQVFMTCNAAMAA---------------SGTVILELALC  285 (383)
Q Consensus       223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~l~~sd~ai~~---------------SGTaTLE~al~  285 (383)
                         +.++++.................+.......  ...+..+.+..+|..+..               .|.+.+|++.+
T Consensus       188 ---~~~l~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~s~~Egfg~~~lEAma~  264 (342)
T 2iuy_A          188 ---GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS  264 (342)
T ss_dssp             ---TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT
T ss_pred             ---CCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC
T ss_conf             ---85244403454310337999974785799722575205777777788765544302345664456776047779975


Q ss_pred             CCCEEEECCCCCCEE
Q ss_conf             753025405774100
Q gi|254780767|r  286 GIPVVSIYKSEWIVN  300 (383)
Q Consensus       286 g~P~IV~Yk~~~lt~  300 (383)
                      |+|.| +...+.+..
T Consensus       265 G~PvI-~s~~gg~~e  278 (342)
T 2iuy_A          265 GTPVV-GTGNGCLAE  278 (342)
T ss_dssp             TCCEE-ECCTTTHHH
T ss_pred             CCEEE-EECCCCHHH
T ss_conf             96299-908997688


No 35 
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCNACYLATION; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2vsn_A*
Probab=98.14  E-value=0.0003  Score=46.57  Aligned_cols=162  Identities=13%  Similarity=0.107  Sum_probs=98.9

Q ss_pred             HHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCC-HHHHHHHHHHHCCCCCE-EEEEC--
Q ss_conf             976187655650599853874301230511189998764027351262016633-68899999960488850-55205--
Q gi|254780767|r  183 NKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSS-QENLVRCIVSKWDISPE-IIIDK--  258 (383)
Q Consensus       183 ~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~-i~~~~--  258 (383)
                      +...+++++..+.+.+    .+ ..+..|-++++-.++.++.|+-.+++...+. .....+......+...+ +.+..  
T Consensus       368 r~~~~l~~~~i~f~~~----n~-~~Ki~p~~~~~w~~IL~~vp~s~L~l~~~~~~~~~~~~~~~~~~g~~~~ri~f~~~~  442 (568)
T 2vsy_A          368 RTQCGLPEQGVVLCCF----NN-SYKLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKL  442 (568)
T ss_dssp             TGGGTCCTTSCEEEEC----CC-GGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCC
T ss_pred             CCCCCCCCCCCEEEEC----CC-CCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHCCCC
T ss_conf             2123999888378752----78-666893499999999864156448996486156789999998605542011222653


Q ss_pred             --CCCHHHHHHHHHHHCC----CHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCC
Q ss_conf             --5203578876355233----1156688876275302540577410000102467610230244078426124205489
Q gi|254780767|r  259 --EQKKQVFMTCNAAMAA----SGTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIR  332 (383)
Q Consensus       259 --~~~~~~l~~sd~ai~~----SGTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~  332 (383)
                        .+....++.+|+++-+    .||.|+|+..+|+|.|...-..+.+..-.-++  ..+|          .||+|-.  +
T Consensus       443 ~~~~~l~~~~~~Di~LDtfp~~g~tt~~eal~~GvPvvTl~g~~~~~R~~as~L--~~~g----------l~e~ia~--~  508 (568)
T 2vsy_A          443 PHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN--HHLG----------LDEMNVA--D  508 (568)
T ss_dssp             CHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH--HHHT----------CGGGBCS--S
T ss_pred             CHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH--HHCC----------CCCCCCC--C
T ss_conf             337899998358689859897975879999977999897778984054899999--9779----------9500369--9


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             8999999999844989999999999999998
Q gi|254780767|r  333 SEALVRWIERLSQDTLQRRAMLHGFENLWDR  363 (383)
Q Consensus       333 ~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~  363 (383)
                      .++-.+...++-+|++.+.++++.+++-+..
T Consensus       509 ~~~Yv~~a~~la~d~~~l~~lr~~lr~~~~~  539 (568)
T 2vsy_A          509 DAAFVAKAVALASDPAALTALHARVDVLRRA  539 (568)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             9999999999964999999999999998863


No 36 
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.06  E-value=1.2e-05  Score=55.76  Aligned_cols=306  Identities=14%  Similarity=0.113  Sum_probs=142.6

Q ss_pred             CCEEEEEECCC------CHHHHHHHHHHHHHHHCCCCEEEEEECCH---H-HHHCCCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf             74599997682------14789999999999738998399997178---9-99478806504445311013674664599
Q gi|254780767|r    3 SLKIAVIAGEI------SGDLLAGDLIKSLKEMVSYPINLVGVGGP---S-LQKEGLVSLFDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         3 ~mki~i~aGE~------SGD~~~a~li~~Lk~~~~~~~~~~giGG~---~-m~~~G~~~~~~~~~l~v~G~~evl~~~~~   72 (383)
                      ..||.++.-..      .|-..+-++.++|.++ +.++++...+.+   . ++......+........... ..+     
T Consensus        46 ~kri~llip~~~~~~~~GGi~t~l~l~~~L~~~-G~~v~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----  118 (413)
T 2x0d_A           46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFAL-QIV-----  118 (413)
T ss_dssp             SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSE-EEE-----
T ss_pred             CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCHHHCCCCCEEEEECCCCCCHHH-HHH-----
T ss_conf             987999965589999888899999999999977-9948999807999713320046357740565552137-776-----


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECHH-HHH---HHHHHHHHHHCCCCCCEEEE---CCCCCCCCCCCHHHHHHH--HHHH
Q ss_conf             99999999861001288868985117-765---79999866301346311110---022110036635579999--9864
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIVDNP-DFT---HRVAKRVRKKMPNLPIINYV---CPSVWAWREGRARKMCAY--INQV  143 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~iD~p-gFn---l~lak~lkk~~~~ipvi~yv---~PqvWAWr~~R~k~~~~~--~d~~  143 (383)
                        .........+...++|+++.-+.+ .+.   +.......-.....+.+|+|   .|-...|+..+...-+.|  .+..
T Consensus       119 --~~~~~~~~~~~~~~~Dvviat~w~~a~~~~~~~~~~~~~~~~~~~~~~y~iq~~e~~f~~~~~~~~~a~~~y~~~~~~  196 (413)
T 2x0d_A          119 --PFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQ  196 (413)
T ss_dssp             --ECSCCTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCE
T ss_pred             --HHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCE
T ss_conf             --666899986431689989993767799999987753330332576389996557222044636799999998469986


Q ss_pred             CCCC--CCCHHHHHCCCC--CCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHH
Q ss_conf             0156--774223200255--314763882112210013558889761876556505998538743012305111899987
Q gi|254780767|r  144 ISIL--PFEKEVMQRLGG--PPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVAS  219 (383)
Q Consensus       144 ~~if--pFE~~~f~k~~~--~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~  219 (383)
                      ++++  ....+++.....  .++.++-+++ |       ...+... .....++.+.++.|- ...-++.+..+++++..
T Consensus       197 i~~~~s~~~~~~~~~~~~~~~~~~~i~n~i-d-------~~~~~~~-~~~~~~~~~il~~gr-~~~~kk~~~~li~Al~~  266 (413)
T 2x0d_A          197 IAVFNSELLKQYFNNKGYNFTDEYFFQPKI-N-------TTLKNYI-NDKRQKEKIILVYGR-PSVKRNAFTLIVEALKI  266 (413)
T ss_dssp             EEEEESHHHHHHHHHHTCCCSEEEEECCCC-C-------HHHHTTT-TSCCCCCSEEEEEEC-TTCGGGCHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHCCCCCCEEEECCCC-C-------HHHCCCC-CCCCCCCCEEEEEEE-ECCCCCCHHHHHHHHHH
T ss_conf             999787999999998669978769968999-9-------8870878-642345768999975-16544346999999999


Q ss_pred             HHHCCCC---CEEEECCCCCHHHHHHHHHHHCCCCCEEEEE----CCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCC
Q ss_conf             6402735---1262016633688999999604888505520----552035788763552331-----156688876275
Q gi|254780767|r  220 LVKRNPF---FRFSLVTVSSQENLVRCIVSKWDISPEIIID----KEQKKQVFMTCNAAMAAS-----GTVILELALCGI  287 (383)
Q Consensus       220 l~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~  287 (383)
                      +.+..++   +.++..... ...      ...+...++...    .++..++++.||+.+..|     |-+.||++.+|+
T Consensus       267 l~~~~~~~~~~~iv~~G~~-~~~------~~l~~~~~v~~lG~v~~~el~~l~~~adi~v~pS~~E~fgl~~lEAma~G~  339 (413)
T 2x0d_A          267 FVQKYDRSNEWKIISVGEK-HKD------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL  339 (413)
T ss_dssp             HHHHCTTGGGCEEEEEESC-CCC------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC
T ss_pred             HHHHCCCCCCEEEEECCCC-HHH------HHCCCCCCEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCC
T ss_conf             8864887761899955750-567------761888617874887989999999867899981356788669999998698


Q ss_pred             CEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             302540577410000102467610230244078426124205489899999999984498999999
Q gi|254780767|r  288 PVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAM  353 (383)
Q Consensus       288 P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~  353 (383)
                      |.| +...+....    ...-...         -++     ...+++++++++.+++++++.++..
T Consensus       340 PVV-~s~~~~~~~----~~~~~~g---------~l~-----~~~d~~~la~~i~~l~~~~~~~~~~  386 (413)
T 2x0d_A          340 RVI-TNKYENKDL----SNWHSNI---------VSL-----EQLNPENIAETLVELCMSFNNRDVD  386 (413)
T ss_dssp             EEE-EECBTTBCG----GGTBTTE---------EEE-----SSCSHHHHHHHHHHHHHHTC-----
T ss_pred             CEE-EECCCCCCE----EEECCCE---------EEE-----CCCCHHHHHHHHHHHHCCCCCHHHH
T ss_conf             299-958998200----3568947---------998-----9999999999999998398669999


No 37 
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.01  E-value=4.1e-05  Score=52.26  Aligned_cols=215  Identities=11%  Similarity=0.107  Sum_probs=123.7

Q ss_pred             CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC-H----HHHHHHHHHHCCCCCCCHHHHHCCCCCC
Q ss_conf             2888689851177657999986630134631111002211003663-5----5799999864015677422320025531
Q gi|254780767|r   87 SKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGR-A----RKMCAYINQVISILPFEKEVMQRLGGPP  161 (383)
Q Consensus        87 ~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R-~----k~~~~~~d~~~~ifpFE~~~f~k~~~~~  161 (383)
                      ...|+++.-..+...  ....+++..++.+++|++..-.-++...+ +    +.+.+.+|.+++.-++..+.+... + +
T Consensus       123 ~~~dvv~~~~~~~~~--~~~~~~~~~p~~~~vy~~~d~~~~~~~~~~~~~~e~~~~~~aD~vi~~s~~~~~~~~~~-~-~  198 (406)
T 2hy7_A          123 RESDVIVFESGIAVA--FIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAEVVSR-D-N  198 (406)
T ss_dssp             HHCSEEEEESSGGGG--GHHHHHHHCTTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSCS-T-T
T ss_pred             CCCCEEEEECCCCHH--HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCC-C-C
T ss_conf             669989990687177--89999732888429999436200144048999999999850999998999999986418-9-8


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHH
Q ss_conf             47638821122100135588897618765565059985387430123051118999876402735126201663368899
Q gi|254780767|r  162 TTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLV  241 (383)
Q Consensus       162 ~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~  241 (383)
                      ++++.|-. |.       ..+..............+.-|+..        ..++++..+.++.|+.+|++........  
T Consensus       199 v~vipnGv-d~-------~~f~~~~~~~~~~~~~~~~~g~~~--------~~~~~l~~l~~~~p~~~l~ivG~g~~~~--  260 (406)
T 2hy7_A          199 VFHVGHGV-DH-------NLDQLGDPSPYAEGIHAVAVGSML--------FDPEFFVVASKAFPQVTFHVIGSGMGRH--  260 (406)
T ss_dssp             EEECCCCB-CT-------THHHHHCSCSCCSSEEEEEECCTT--------BCHHHHHHHHHHCTTEEEEEESCSSCCC--
T ss_pred             EEEECCCC-CH-------HHCCCCCCCCCCCCCEEEEECCHH--------HHHHHHHHHHHHCCCCEEEEEECCCCCC--
T ss_conf             99968978-96-------665777787655674589856146--------5699999999878991899982462224--


Q ss_pred             HHHHHHCCCCCEEEEE----CCCCHHHHHHHHHHHCCC------------HHHHHHHHHHCCCEEEECCCCCCEEEEEEC
Q ss_conf             9999604888505520----552035788763552331------------156688876275302540577410000102
Q gi|254780767|r  242 RCIVSKWDISPEIIID----KEQKKQVFMTCNAAMAAS------------GTVILELALCGIPVVSIYKSEWIVNFFIFY  305 (383)
Q Consensus       242 ~~~~~~~~~~~~i~~~----~~~~~~~l~~sd~ai~~S------------GTaTLE~al~g~P~IV~Yk~~~lt~~i~~l  305 (383)
                            .....++...    .++....++.+|+++..|            |...+|++.+|+|.| +.....+       
T Consensus       261 ------~~~~~~V~~~g~~~~~~l~~~~~~adv~v~P~~~~~~~~~~~~~~~kl~Ea~a~G~PVV-at~~~~~-------  326 (406)
T 2hy7_A          261 ------PGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAV-CPNAVVG-------  326 (406)
T ss_dssp             ------TTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEE-EEGGGTC-------
T ss_pred             ------CCCCCEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEE-ECCCCCC-------
T ss_conf             ------45575599947868999999997598999667665553200157623999997599889-6777766-------


Q ss_pred             CCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHH
Q ss_conf             46761023024407842612420548989999999998449899999
Q gi|254780767|r  306 IKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRA  352 (383)
Q Consensus       306 ik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~  352 (383)
                              +-      . .+++-.--+++.++.++.++++|+..+..
T Consensus       327 --------~~------~-~~~~~~~~d~~~la~ai~~~l~~p~~~~~  358 (406)
T 2hy7_A          327 --------PY------K-SRFGYTPGNADSVIAAITQALEAPRVRYR  358 (406)
T ss_dssp             --------SC------S-SEEEECTTCHHHHHHHHHHHHHCCCCCCS
T ss_pred             --------CC------C-CCEEECCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf             --------77------7-52388799999999999999849377877


No 38 
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=97.91  E-value=0.0015  Score=41.91  Aligned_cols=145  Identities=12%  Similarity=0.145  Sum_probs=82.0

Q ss_pred             CEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCC----EEEECCCCCHH---------HHHHHHHH-------HCCCCC
Q ss_conf             50599853874301230511189998764027351----26201663368---------89999996-------048885
Q gi|254780767|r  193 KKILLLPGSRAQEIYKILPFFESAVASLVKRNPFF----RFSLVTVSSQE---------NLVRCIVS-------KWDISP  252 (383)
Q Consensus       193 ~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~----~~~i~~~~~~~---------~~~~~~~~-------~~~~~~  252 (383)
                      +.+.+.- .|-.. .+.++..+++...+.+++|+.    .++....++..         ..+.....       ..+..+
T Consensus       255 ~~~il~v-gRld~-~KGi~~~l~A~~~ll~~~P~~~~~v~lv~~~~~~~~~~~~~~~l~~~l~~lv~~in~~~~~~~~~~  332 (482)
T 1uqt_A          255 VQNIFSV-ERLDY-SKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP  332 (482)
T ss_dssp             CEEEEEE-CCBCG-GGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS
T ss_pred             CEEEEEC-CCCCH-HHCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             5499982-88751-107899999999998759041673899994588755567899999999999998876522578875


Q ss_pred             EEEEE----CCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCE----EEECCCCCCEEEEEECCCCCCEEEEHHHCC
Q ss_conf             05520----552035788763552331-----15668887627530----254057741000010246761023024407
Q gi|254780767|r  253 EIIID----KEQKKQVFMTCNAAMAAS-----GTVILELALCGIPV----VSIYKSEWIVNFFIFYIKTWTCALPNLIVD  319 (383)
Q Consensus       253 ~i~~~----~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~----IV~Yk~~~lt~~i~~lik~~~i~LpNii~~  319 (383)
                      .+...    ..+...+++.||+++++|     |.+.+|++.+|+|.    +|+-..+               |.+-.+.+
T Consensus       333 ~v~~~~~~~~~~l~~ly~~aDv~v~~S~~Eg~~Lv~~Eama~~~p~~~g~lV~S~~~---------------G~~~~l~~  397 (482)
T 1uqt_A          333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA---------------GAANELTS  397 (482)
T ss_dssp             EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTB---------------GGGGTCTT
T ss_pred             EEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEECCC---------------CCHHHHCC
T ss_conf             352158888889876406045999577425788589999982999888518982788---------------86788497


Q ss_pred             CCCCCHHHCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHH
Q ss_conf             84261242054898999999999844-98999999999999
Q gi|254780767|r  320 YPLVPEYFNSMIRSEALVRWIERLSQ-DTLQRRAMLHGFEN  359 (383)
Q Consensus       320 ~~ivPEliQ~~~~~~~i~~~~~~ll~-d~~~r~~~~~~~~~  359 (383)
                      --+|     +-.+++.+++++.+.|+ +++.|+.+.++..+
T Consensus       398 g~lV-----nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~  433 (482)
T 1uqt_A          398 ALIV-----NPYDRDEVAAALDRALTMSLAERISRHAEMLD  433 (482)
T ss_dssp             SEEE-----CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             EEEE-----CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             0898-----98999999999999973999999999999989


No 39 
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.49  E-value=0.00055  Score=44.82  Aligned_cols=222  Identities=12%  Similarity=0.088  Sum_probs=120.1

Q ss_pred             HHHHCCCCCCCHHHHHCCCC---CCEEECCCCCCCCCCCC----CCHHHHHHHCCCCCCCCEEEEEECCCCCCHHH----
Q ss_conf             98640156774223200255---31476388211221001----35588897618765565059985387430123----
Q gi|254780767|r  140 INQVISILPFEKEVMQRLGG---PPTTFVGHPLSSSPSIL----EVYSQRNKQRNTPSQWKKILLLPGSRAQEIYK----  208 (383)
Q Consensus       140 ~d~~~~ifpFE~~~f~k~~~---~~~~fVGHPl~d~~~~~----~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~----  208 (383)
                      .|.+++-=+++.+.|.+.-+   -++.-+|.|-.|.....    ......++.++++.++++|+.+|-=|..+...    
T Consensus       479 ~d~~~~~s~~~~~~~~~~f~~~~~~v~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kkvILy~PT~R~~~~~~~~~~  558 (729)
T 3l7i_A          479 WDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKY  558 (729)
T ss_dssp             CSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSS
T ss_pred             CCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECEEECCCCCCCCHH
T ss_conf             89899888899999999838996607783657607875421048999999986699966707999030205665663100


Q ss_pred             --HCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             --05111899987640273512620166336889999996048885055--20552035788763552331156688876
Q gi|254780767|r  209 --ILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAASGTVILELAL  284 (383)
Q Consensus       209 --~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~SGTaTLE~al  284 (383)
                        ..+..++.+.+..+  .++.+++-.-|..    ............+.  ....+.+++|..||+.|+==-.+..|.++
T Consensus       559 ~~~~~~~~~~l~~~l~--~~~~li~k~Hp~~----~~~~~~~~~~~~~~~~~~~~d~~~ll~~sD~lITDYSSv~fd~~~  632 (729)
T 3l7i_A          559 LFELKIDLDNLYKELG--DDYVILLRMHYLI----SNALDLSGYENFAIDVSNYNDVSELFLISDCLITDYSSVMFDYGI  632 (729)
T ss_dssp             CCCCTTCHHHHHHHHT--TTEEEEECCCHHH----HTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEESSCTHHHHHGG
T ss_pred             HHHHHHHHHHHHHHCC--CCCEEEEECCCCH----HHCCCCCCCCCEEEECCCCCCHHHHHHHHCEEEECHHHHHHHHHH
T ss_conf             1233667999999758--9948999768232----311443457885871899868999999834999737879999999


Q ss_pred             HCCCEEEECCCCCCEEEE-EECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             275302540577410000-1024676102302440784261242054898999999999844989999999999999998
Q gi|254780767|r  285 CGIPVVSIYKSEWIVNFF-IFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDR  363 (383)
Q Consensus       285 ~g~P~IV~Yk~~~lt~~i-~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~  363 (383)
                      ++.| |+.|.-.+=.|.- .|-.   |.......-| +++       -+.+.|.+++.....+.+   +..+..++..++
T Consensus       633 l~kP-ii~~~~D~~~Y~~~~rg~---y~d~~~~~pG-~~~-------~~~~eL~~~l~~~~~~~~---~~~~~~~~~~~~  697 (729)
T 3l7i_A          633 LKRP-QFFFAYDIDKYDKGLRGF---YMNYMEDLPG-PIY-------TEPYGLAKELKNLDKVQQ---QYQEKIDAFYDR  697 (729)
T ss_dssp             GCCC-EEEECTTTTTTTSSCCSB---SSCTTSSSSS-CEE-------SSHHHHHHHHTTHHHHHH---HTHHHHHHHHHH
T ss_pred             HCCC-EEEECCCHHHHHHHCCCC---CCCHHHCCCC-CEE-------CCHHHHHHHHHHHHHCCH---HHHHHHHHHHHH
T ss_conf             7898-999888899986435886---0178782997-768-------989999999972531666---789999999999


Q ss_pred             HC--CCCCHHHHHHHHHHHHC
Q ss_conf             38--99998999999999861
Q gi|254780767|r  364 MN--TKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       364 Lg--~~~~a~~~AA~~I~~~L  382 (383)
                      ..  ..|.++++..+.|.+.+
T Consensus       698 ~~~~~dg~~~~ri~~~i~~~~  718 (729)
T 3l7i_A          698 FCSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             HSTTCCSCHHHHHHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHHHHHHH
T ss_conf             589989939999999999987


No 40 
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein structure initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: c.87.1.8
Probab=97.10  E-value=0.0013  Score=42.42  Aligned_cols=129  Identities=12%  Similarity=0.125  Sum_probs=76.8

Q ss_pred             EEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCC---CHHHHHHHHHHHCCCCCEEEE----ECCCCHHHHHH
Q ss_conf             59985387430123051118999876402735126201663---368899999960488850552----05520357887
Q gi|254780767|r  195 ILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVS---SQENLVRCIVSKWDISPEIII----DKEQKKQVFMT  267 (383)
Q Consensus       195 I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~l~~  267 (383)
                      ..|+.| |-.+ .+.+..++++++++    ++.++++....   +........+.+... .+|..    ...+..++++.
T Consensus        25 ~~l~vg-rl~~-~Kg~~~li~a~~~l----~~~~l~ivG~~~~~~~~~~~~~~l~~~~~-~~V~~~g~~~~~el~~~~~~   97 (177)
T 2f9f_A           25 FWLSVN-RIYP-EKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAP-DNVKFLGSVSEEELIDLYSR   97 (177)
T ss_dssp             CEEEEC-CSSG-GGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSC-TTEEEEESCCHHHHHHHHHH
T ss_pred             EEEEEE-CCCC-CCCHHHHHHHHHHC----CCCCEEEEEECCCHHHHHHHHHHHHHHCC-CCEEECCCCCHHHHHHHHHH
T ss_conf             999992-5851-20999999999827----89828999857855699999999972589-98999178999999999864


Q ss_pred             HHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHH
Q ss_conf             63552331-----1566888762753025405774100001024676102302440784261242054898999999999
Q gi|254780767|r  268 CNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIER  342 (383)
Q Consensus       268 sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~  342 (383)
                      ||+.+.+|     |.+.+|++.+|+|.| +...++...++.   .           +...+  +.  +.+++.+++.+..
T Consensus        98 sd~~i~~s~~e~~~~~~~Eam~~G~pvi-~s~~~~~~e~i~---~-----------~~~g~--~~--~~d~~~l~~~i~~  158 (177)
T 2f9f_A           98 CKGLLCTAKDEDFGLTPIEAMASGKPVI-AVNEGGFKETVI---N-----------EKTGY--LV--NADVNEIIDAMKK  158 (177)
T ss_dssp             CSEEEECCSSCCSCHHHHHHHHTTCCEE-EESSHHHHHHCC---B-----------TTTEE--EE--CSCHHHHHHHHHH
T ss_pred             HHCCCCCCHHHCCCCHHHHHHHCCCCEE-EECCCCCHHHHC---C-----------CCEEE--EE--CCCHHHHHHHHHH
T ss_conf             3104677422216726999997799689-958998189842---8-----------97799--96--9399999999999


Q ss_pred             HHCCHHH
Q ss_conf             8449899
Q gi|254780767|r  343 LSQDTLQ  349 (383)
Q Consensus       343 ll~d~~~  349 (383)
                      +++|++.
T Consensus       159 ll~~~~~  165 (177)
T 2f9f_A          159 VSKNPDK  165 (177)
T ss_dssp             HHHCTTT
T ss_pred             HHCCHHH
T ss_conf             9849999


No 41 
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=96.72  E-value=0.013  Score=35.75  Aligned_cols=140  Identities=14%  Similarity=0.085  Sum_probs=73.2

Q ss_pred             CCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHH--HH
Q ss_conf             5565059985387430123051118999876402735126201663368899999960488850552055203578--87
Q gi|254780767|r  190 SQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEIIIDKEQKKQVF--MT  267 (383)
Q Consensus       190 ~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l--~~  267 (383)
                      .++++|.+=-||-.+..   -..+++.+-.-..+. +..++.........       ..+.+..+ ...-...+++  ..
T Consensus        19 ~~~~vV~vs~GS~~~~~---~~~~~~~i~~~~~~~-~~~~i~~~~~~~~~-------~~~~~~~~-~~~~p~~~il~~~~   86 (170)
T 2o6l_A           19 GENGVVVFSLGSMVSNM---TEERANVIASALAQI-PQKVLWRFDGNKPD-------TLGLNTRL-YKWIPQNDLLGHPK   86 (170)
T ss_dssp             TTTCEEEEECCSCCTTC---CHHHHHHHHHHHTTS-SSEEEEECCSSCCT-------TCCTTEEE-ESSCCHHHHHTSTT
T ss_pred             CCCCEEEECCCCCCCCC---CHHHHHHHHHHHHHC-CCCEEEEECCCCCC-------CCCCCEEE-EEECCHHHHHCCCC
T ss_conf             99968999079757588---899999999999858-99669985787733-------47987179-88676355423865


Q ss_pred             HHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             6355233115668-887627530254057741000010246761023024407842612420548989999999998449
Q gi|254780767|r  268 CNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQD  346 (383)
Q Consensus       268 sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d  346 (383)
                      |++.|+-.|..|+ |+...|+|++++--. +=.....+.+.-.-+|.        .+   -.+++|++.|.+++.++++|
T Consensus        87 ~~~~I~HGG~~t~~eal~~GvP~l~iP~~-~DQ~~na~~v~~~G~g~--------~l---~~~~~t~~~l~~ai~~ll~d  154 (170)
T 2o6l_A           87 TRAFITHGGANGIYEAIYHGIPMVGIPLF-ADQPDNIAHMKARGAAV--------RV---DFNTMSSTDLLNALKRVIND  154 (170)
T ss_dssp             EEEEEECCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHTTTSEE--------EC---CTTTCCHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHCCCCEEECCCH-HHHHHHHHHHHHCCCEE--------EE---CCCCCCHHHHHHHHHHHHCC
T ss_conf             01898627730243677427787845850-21799999999879589--------80---50578999999999999789


Q ss_pred             HHHHHHH
Q ss_conf             8999999
Q gi|254780767|r  347 TLQRRAM  353 (383)
Q Consensus       347 ~~~r~~~  353 (383)
                      +.++++.
T Consensus       155 ~~y~~~a  161 (170)
T 2o6l_A          155 PSYKENV  161 (170)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999999


No 42 
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.68  E-value=0.01  Score=36.52  Aligned_cols=110  Identities=16%  Similarity=0.129  Sum_probs=59.5

Q ss_pred             EEECCCCHHHHHH--HHHHHCCCHHHHH-HHHHHCCCEEEECCCCCCEEEEEECC-CCCCEEEEHHHCCCCCCCHHHCCC
Q ss_conf             5205520357887--6355233115668-88762753025405774100001024-676102302440784261242054
Q gi|254780767|r  255 IIDKEQKKQVFMT--CNAAMAASGTVIL-ELALCGIPVVSIYKSEWIVNFFIFYI-KTWTCALPNLIVDYPLVPEYFNSM  330 (383)
Q Consensus       255 ~~~~~~~~~~l~~--sd~ai~~SGTaTL-E~al~g~P~IV~Yk~~~lt~~i~~li-k~~~i~LpNii~~~~ivPEliQ~~  330 (383)
                      +.......++|.+  +++.|+-.|-.|. |+...|+|||++--.. =.....+.+ ...-+|+ ++-.++       +..
T Consensus       343 v~~w~PQ~~iL~hp~v~~fVtHGG~~s~~Eal~~GVP~v~~P~~~-DQ~~na~rv~e~~G~Gv-~l~~~~-------~~~  413 (480)
T 2vch_A          343 IPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYA-EQKMNAVLLSEDIRAAL-RPRAGD-------DGL  413 (480)
T ss_dssp             EESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHTTCCEE-CCCCCT-------TSC
T ss_pred             EEEECCCHHHHCCCCCCEEECCCCCHHHHHHHHCCCCEEECCCCC-CCHHHHHHHHHHCEEEE-EEECCC-------CCC
T ss_conf             986458389876881016851587418999998599989534202-35788999877330699-963488-------895


Q ss_pred             CCHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             898999999999844989---99999999999999838999989999
Q gi|254780767|r  331 IRSEALVRWIERLSQDTL---QRRAMLHGFENLWDRMNTKKPAGHMA  374 (383)
Q Consensus       331 ~~~~~i~~~~~~ll~d~~---~r~~~~~~~~~~~~~Lg~~~~a~~~A  374 (383)
                      +|+++|.+++.+++.|++   +|++..+=-+.+++-+..+| +++++
T Consensus       414 ~t~e~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~A~~~~G-ss~~~  459 (480)
T 2vch_A          414 VRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDG-TSTKA  459 (480)
T ss_dssp             CCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTS-HHHHH
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC-CHHHH
T ss_conf             97999999999996695589999999999999999850799-58999


No 43 
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3nch_A 3naz_A 3o3c_A*
Probab=95.49  E-value=0.037  Score=32.77  Aligned_cols=100  Identities=19%  Similarity=0.223  Sum_probs=53.8

Q ss_pred             CCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHH-CCCCCCCHHH-CCCCC
Q ss_conf             2035788763552331-----156688876275302540577410000102467610230244-0784261242-05489
Q gi|254780767|r  260 QKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLI-VDYPLVPEYF-NSMIR  332 (383)
Q Consensus       260 ~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii-~~~~ivPEli-Q~~~~  332 (383)
                      ..+++++.||+.+..|     |-+.||++.+|+|.|+- .++.+.-++...+...     +-. .|=.|++--- ..+-.
T Consensus       511 ~y~~~~aGaDl~V~PS~YEPfGlt~LEAma~G~P~I~t-~~gGfg~~v~~~~~~~-----~~~~~Gv~v~~r~~~~~~e~  584 (725)
T 3nb0_A          511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITT-NVSGFGSYMEDLIETN-----QAKDYGIYIVDRRFKAPDES  584 (725)
T ss_dssp             CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEE-TTBHHHHHHHTTSCHH-----HHHHTTEEEECCSSSCHHHH
T ss_pred             CHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCEEEE-CCCCHHHHHHHHCCCC-----CCCCCCEEEECCCCCCHHHH
T ss_conf             19999842877984551147665999998779987983-5874878988751477-----77778769843777887999


Q ss_pred             HHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHC
Q ss_conf             89999999998449-8999999999999999838
Q gi|254780767|r  333 SEALVRWIERLSQD-TLQRRAMLHGFENLWDRMN  365 (383)
Q Consensus       333 ~~~i~~~~~~ll~d-~~~r~~~~~~~~~~~~~Lg  365 (383)
                      .+.|++.+..+... ...|..+++..+.+.+.+.
T Consensus       585 v~~l~~~l~~~~~~~~~~~~~~r~~~~~ls~~f~  618 (725)
T 3nb0_A          585 VEQLVDYMEEFVKKTRRQRINQRNATEALSDLLD  618 (725)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGB
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999985899999999999999987299


No 44 
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae}
Probab=92.64  E-value=0.019  Score=34.64  Aligned_cols=36  Identities=8%  Similarity=0.164  Sum_probs=28.9

Q ss_pred             CCHHHH-HHHHHHHCCCHHHHH-HHHHHCCCEEEECCC
Q ss_conf             203578-876355233115668-887627530254057
Q gi|254780767|r  260 QKKQVF-MTCNAAMAASGTVIL-ELALCGIPVVSIYKS  295 (383)
Q Consensus       260 ~~~~~l-~~sd~ai~~SGTaTL-E~al~g~P~IV~Yk~  295 (383)
                      +..+.+ ..||++|+-+|+.|+ |++.+|+|.|++-+.
T Consensus       124 ~~~~~~~~~adlvIshaG~gti~e~l~~~kp~i~vP~~  161 (224)
T 2jzc_A          124 KMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVND  161 (224)
T ss_dssp             SHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCS
T ss_pred             HHHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEEECC
T ss_conf             37899864236888568647999999968998998377


No 45 
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=91.67  E-value=0.091  Score=30.18  Aligned_cols=93  Identities=13%  Similarity=0.270  Sum_probs=56.5

Q ss_pred             CCCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             9874599997-682147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |+.|||.|+. |--.|..    .++++++  .+++++.|+.++.-+.+.  .+  -+++   |...+.          ..
T Consensus         3 m~~irigiiG~G~~~~~~----h~~~l~~--~~~~~lvav~d~~~~~~~--~~--a~~~---~~~~~~----------~~   59 (359)
T 3m2t_A            3 LSLIKVGLVGIGAQMQEN----LLPSLLQ--MQDIRIVAACDSDLERAR--RV--HRFI---SDIPVL----------DN   59 (359)
T ss_dssp             CCCEEEEEECCSHHHHHT----HHHHHHT--CTTEEEEEEECSSHHHHG--GG--GGTS---CSCCEE----------SS
T ss_pred             CCCCEEEEECCHHHHHHH----HHHHHHH--CCCCEEEEEECCCHHHHH--HH--HHHC---CCCCEE----------CC
T ss_conf             536289999171999999----9999983--999589999889999999--99--9884---998531----------89


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+.+..||+|+..--|.++..+++.+=++  |++|+
T Consensus        60 ~~~ll~~~~iD~V~I~tp~~~H~~~~~~al~~--Gk~V~   96 (359)
T 3m2t_A           60 VPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSK--GVNVF   96 (359)
T ss_dssp             HHHHHHHSCCSEEEECSCHHHHHHHHHHHHHT--TCEEE
T ss_pred             HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCEEE
T ss_conf             99996599999899878635435899999843--98099


No 46 
>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5
Probab=91.53  E-value=0.1  Score=29.84  Aligned_cols=94  Identities=13%  Similarity=0.212  Sum_probs=51.6

Q ss_pred             CCCCEEEEEECCCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             987459999768214-7899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~aGE~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |+++||.|+....-| ..|    +.+|++. +..+++.|+.++.-+..  +.+  -+++.   ...          .+..
T Consensus        16 mk~lrigiIG~G~~g~~~h----~~~l~~~-~~~~~l~ai~d~~~~~~--~~~--~~~~~---~~~----------~~~~   73 (340)
T 1zh8_A           16 LRKIRLGIVGCGIAARELH----LPALKNL-SHLFEITAVTSRTRSHA--EEF--AKMVG---NPA----------VFDS   73 (340)
T ss_dssp             CCCEEEEEECCSHHHHHTH----HHHHHTT-TTTEEEEEEECSSHHHH--HHH--HHHHS---SCE----------EESC
T ss_pred             CCCCEEEEECCCHHHHHHH----HHHHHHC-CCCEEEEEEECCCHHHH--HHH--HHHCC---CCC----------EECC
T ss_conf             6688899995889999999----9999728-99769999989999999--999--99839---983----------5388


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      ..+.+.+..+|+|+..--|.++..+++.+=+.  |++|+
T Consensus        74 ~~ell~~~~iD~V~I~tp~~~H~~~~~~al~a--gk~Vl  110 (340)
T 1zh8_A           74 YEELLESGLVDAVDLTLPVELNLPFIEKALRK--GVHVI  110 (340)
T ss_dssp             HHHHHHSSCCSEEEECCCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHHCCCCCCEEEECCCCHHHHHHHHHHHHC--CCCEE
T ss_conf             99995599999899138703457899999866--99657


No 47 
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=91.10  E-value=0.17  Score=28.39  Aligned_cols=91  Identities=10%  Similarity=0.078  Sum_probs=58.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+++||.|+....-    |...++++++.  +++++.|+..+.-++.  +.   ..+..+              +.+...
T Consensus         3 mk~~rigiIG~G~~----g~~h~~~~~~~--~~~~l~av~d~~~~~~--~~---~~~~~~--------------~~~~~~   57 (359)
T 3e18_A            3 LKKYQLVIVGYGGM----GSYHVTLASAA--DNLEVHGVFDILAEKR--EA---AAQKGL--------------KIYESY   57 (359)
T ss_dssp             CCCEEEEEECCSHH----HHHHHHHHHTS--TTEEEEEEECSSHHHH--HH---HHTTTC--------------CBCSCH
T ss_pred             CCCCCEEEECCCHH----HHHHHHHHHHC--CCCEEEEEECCCHHHH--HH---HHHCCC--------------CCCCCH
T ss_conf             88771999946799----99999999858--9958999988999999--99---986299--------------701999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+.+||+|+..-.|.++..+++.+=+.  |++|+
T Consensus        58 ~ell~~~~iD~V~i~tp~~~h~~~~~~al~~--gkhv~   93 (359)
T 3e18_A           58 EAVLADEKVDAVLIATPNDSHKELAISALEA--GKHVV   93 (359)
T ss_dssp             HHHHHCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCCHHHHHHHHHHHHC--CCEEE
T ss_conf             9995599989899878805523567888853--98199


No 48 
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=90.56  E-value=0.69  Score=24.38  Aligned_cols=87  Identities=14%  Similarity=0.196  Sum_probs=53.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+++||.|+.-   |- .|..+++.|++  .+++++.|+....-...+        ...+.-..              ..
T Consensus         1 M~~irv~ivG~---G~-iG~~~~~~l~~--~~~~elv~v~~r~~~~~~--------~~~v~~~~--------------d~   52 (320)
T 1f06_A            1 MTNIRVAIVGY---GN-LGRSVEKLIAK--QPDMDLVGIFSRRATLDT--------KTPVFDVA--------------DV   52 (320)
T ss_dssp             CCCEEEEEECC---SH-HHHHHHHHHTT--CSSEEEEEEEESSSCCSS--------SSCEEEGG--------------GG
T ss_pred             CCCCEEEEECC---CH-HHHHHHHHHHH--CCCCEEEEEEECCHHHCC--------CCCCCCHH--------------HH
T ss_conf             98557999880---89-99999999970--999799999968867676--------88864517--------------79


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             861001288868985117765799998663013463111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      .+.  ...+|+|+..--++.++..++.+=+.  |+.++-
T Consensus        53 ~~~--~~~~Dvvii~tp~~~~~~~~~~~l~~--G~~VV~   87 (320)
T 1f06_A           53 DKH--ADDVDVLFLCMGSATDIPEQAPKFAQ--FACTVD   87 (320)
T ss_dssp             GGT--TTTCSEEEECSCTTTHHHHHHHHHTT--TSEEEC
T ss_pred             HHH--CCCCCEEEECCCCCCCHHHHHHHHHC--CCCEEE
T ss_conf             974--05799999878971689999999986--999998


No 49 
>2b4a_A BH3024; 10175646, structural genomics, joint center for structural genomics, JCSG, protein structure initiative PSI, unknown function; 2.42A {Bacillus halodurans c-125} SCOP: c.23.1.1
Probab=89.99  E-value=0.87  Score=23.72  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=50.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++|||+|+=.+++   ....+-+.|++.   ++++..+....                     +.+             
T Consensus        13 m~~~rILvVDDd~~---~~~~l~~~L~~~---G~~v~~~~~g~---------------------~al-------------   52 (138)
T 2b4a_A           13 MQPFRVTLVEDEPS---HATLIQYHLNQL---GAEVTVHPSGS---------------------AFF-------------   52 (138)
T ss_dssp             -CCCEEEEECSCHH---HHHHHHHHHHHT---TCEEEEESSHH---------------------HHH-------------
T ss_pred             CCCCEEEEEECCHH---HHHHHHHHHHHC---CCEEEEECCHH---------------------HHH-------------
T ss_conf             67888999969999---999999999985---99799809999---------------------999-------------


Q ss_pred             HHHC-CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             8610-0128886898-5117765-79999866301346311110
Q gi|254780767|r   81 VELI-VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        81 ~~~i-~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                       +.+ ....||++|+ +.-||.| +.+++.+|+...++|+|...
T Consensus        53 -~~l~~~~~~DlvilD~~lP~~dG~~l~~~ir~~~~~~piI~lt   95 (138)
T 2b4a_A           53 -QHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT   95 (138)
T ss_dssp             -HTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred             -HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             -9998369998899858889988899999999709999689998


No 50 
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=88.77  E-value=0.3  Score=26.80  Aligned_cols=88  Identities=14%  Similarity=0.180  Sum_probs=51.5

Q ss_pred             CCCCEEEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEEEEC-CH---------H-------HHHCCCEEE--ECHHHCCE
Q ss_conf             98745999976821478999-99999997389983999971-78---------9-------994788065--04445311
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAG-DLIKSLKEMVSYPINLVGVG-GP---------S-------LQKEGLVSL--FDFSELSV   60 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~giG-G~---------~-------m~~~G~~~~--~~~~~l~v   60 (383)
                      |+.|||++++.-+-=..+|+ ..+..+.++ +..+.+..+. |+         +       ++..|++..  .++.+...
T Consensus         1 m~~~~ILvi~aHPDDe~lg~GGtlak~~~~-G~~V~vv~lT~G~~~~~~~~~~R~~E~~~A~~~LGv~~~~~l~~~D~~~   79 (242)
T 2ixd_A            1 MSGLHILAFGAHADDVEIGMAGTIAKYTKQ-GYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGL   79 (242)
T ss_dssp             -CCCSEEEEESSTTHHHHHHHHHHHHHHHT-TCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCC
T ss_pred             CCCCCEEEEEECCCHHHHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             999718999878886788789999999977-9919999973897786641677999999999863975033167885444


Q ss_pred             EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHH
Q ss_conf             013674664599999999998610012888689851177
Q gi|254780767|r   61 IGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPD   99 (383)
Q Consensus        61 ~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pg   99 (383)
                                ..-....+++.+.|++.+||+|++=...|
T Consensus        80 ----------~~~~e~~~~l~~~i~~~~Pd~V~t~~~~D  108 (242)
T 2ixd_A           80 ----------YMKEEYIREIVKVIRTYKPKLVFAPYYED  108 (242)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHCCSEEEEECSCS
T ss_pred             ----------CCHHHHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf             ----------66999999999997540544787468888


No 51 
>2hun_A 336AA long hypothetical DTDP-glucose 4,6- dehydratase; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii OT3}
Probab=88.73  E-value=0.52  Score=25.21  Aligned_cols=36  Identities=19%  Similarity=0.443  Sum_probs=27.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++|||+|. |-.  =..|+.|++.|.++ +.+.++.|+-
T Consensus         1 ~~~MkILIT-Gat--GfiG~~l~~~L~~~-~~~~~V~~~d   36 (336)
T 2hun_A            1 MHSMKLLVT-GGM--GFIGSNFIRYILEK-HPDWEVINID   36 (336)
T ss_dssp             --CCEEEEE-TTT--SHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred             CCCCEEEEE-CCC--CHHHHHHHHHHHHC-CCCCEEEEEE
T ss_conf             999889998-788--78999999999966-9997899996


No 52 
>2rng_A BIG defensin; alpha-helices & beta-sheets, three disulfide bridges, antibiotic, antimicrobial, fungicide, secreted; NMR {Tachypleus tridentatus} PDB: 2rq2_A
Probab=88.68  E-value=0.048  Score=31.99  Aligned_cols=16  Identities=50%  Similarity=0.866  Sum_probs=13.7

Q ss_pred             CCCCEEE---ECCCCCCCC
Q ss_conf             4631111---002211003
Q gi|254780767|r  114 NLPIINY---VCPSVWAWR  129 (383)
Q Consensus       114 ~ipvi~y---v~PqvWAWr  129 (383)
                      -||++|+   |+||||+|=
T Consensus         3 aiP~~Y~G~~V~P~V~~wL   21 (79)
T 2rng_A            3 LIPAIYIGATVGPSVWAYL   21 (79)
T ss_dssp             CSCSTTTTEEECHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHH
T ss_conf             5647977020078999999


No 53 
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=88.58  E-value=1.2  Score=22.76  Aligned_cols=91  Identities=11%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEE-ECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999-71789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVG-VGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~g-iGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      +++|||+++.+.  |--||  ++.+|++ .+.--+++- -|-+.|...+-....|+++                   .+.
T Consensus        19 ~~~mkvLviGsG--gREhA--i~~~l~~-s~~~~~v~~~pgN~g~~~~~~~~~i~~~d-------------------~~~   74 (442)
T 3lp8_A           19 PGSMNVLVIGSG--GREHS--MLHHIRK-STLLNKLFIAPGREGMSGLADIIDIDINS-------------------TIE   74 (442)
T ss_dssp             -CCEEEEEEECS--HHHHH--HHHHHTT-CTTEEEEEEEECCGGGTTTSEECCCCTTC-------------------HHH
T ss_pred             CCCCEEEEECCC--HHHHH--HHHHHHH-CCCCCEEEEECCCHHHHHCCCEEEECCCC-------------------HHH
T ss_conf             998689998988--89999--9999975-98989899979967887418216627789-------------------999


Q ss_pred             HHHHCCCCCCCEEEE-ECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898-511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLI-VDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~-iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+++++||+||. -..| ..--++-.+++.  |+|++
T Consensus        75 l~~~~~~~~iDlvvvGpE~p-L~~Gi~D~l~~~--gi~vf  111 (442)
T 3lp8_A           75 VIQVCKKEKIELVVIGPETP-LMNGLSDALTEE--GILVF  111 (442)
T ss_dssp             HHHHHHHTTCCEEEECSHHH-HHTTHHHHHHHT--TCEEE
T ss_pred             HHHHHHHCCCCEEEECCCHH-HHHHHHHHHHHC--CCCEE
T ss_conf             99999982999999898389-887889999748--99478


No 54 
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=87.06  E-value=1.4  Score=22.33  Aligned_cols=40  Identities=20%  Similarity=0.337  Sum_probs=29.6

Q ss_pred             CCCCEEEEEECCCCHHH-----HHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             98745999976821478-----99999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDL-----LAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~-----~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+++||.|++|..|...     -|..++++|++....++...++.
T Consensus         1 M~K~kIavl~GG~S~E~eiSl~Sg~~v~~~L~~~~~y~v~~~~i~   45 (377)
T 1ehi_A            1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA   45 (377)
T ss_dssp             --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             998889999694886459999999999997456559208999986


No 55 
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A*
Probab=87.03  E-value=1.5  Score=22.15  Aligned_cols=77  Identities=23%  Similarity=0.235  Sum_probs=46.1

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             987459999768214789-----999999999738998399997178999478806504445311013674664599999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      |++ ||.|++|..|.+..     |..+.++|++. +  .+..-+              |..+..                
T Consensus         1 m~~-ki~vl~GG~S~E~~iSl~Sg~~i~~aL~~~-g--~~v~~i--------------d~~~~~----------------   46 (306)
T 1iow_A            1 MTD-KIAVLLGGTSAEREVSLNSGAAVLAGLREG-G--IDAYPV--------------DPKEVD----------------   46 (306)
T ss_dssp             CCC-EEEEECCCSSTTHHHHHHHHHHHHHHHHHT-T--CEEEEE--------------CTTTSC----------------
T ss_pred             CCC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHC-C--CEEEEE--------------CCCCCC----------------
T ss_conf             985-099993858731286999999999999886-9--989998--------------998554----------------


Q ss_pred             HHHHHHHHCCCCCCCEEEEEC--HHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             999998610012888689851--1776579999866301346311
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIVD--NPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~iD--~pgFnl~lak~lkk~~~~ipvi  118 (383)
                           ...++..+||.|+-+-  ..|-+..+...+...  |||.+
T Consensus        47 -----~~~l~~~~~d~vf~~~hG~~~ed~~~~~~le~~--~ipy~   84 (306)
T 1iow_A           47 -----VTQLKSMGFQKVFIALHGRGGEDGTLQGMLELM--GLPYT   84 (306)
T ss_dssp             -----GGGTTTTTEEEEEECCCSTTTSSSHHHHHHHHH--TCCBS
T ss_pred             -----HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHC--CCEEE
T ss_conf             -----888864489889993468854137999999987--96382


No 56 
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=86.96  E-value=0.4  Score=25.93  Aligned_cols=93  Identities=16%  Similarity=0.264  Sum_probs=56.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++||+.|+....-|..|    +.+|++. + ++++.|+..+.-+.+.  .+  -+++   |+       +   +.+...
T Consensus         3 m~kir~giIG~G~i~~~h----~~~l~~~-~-~~~l~av~d~~~~~~~--~~--a~~~---~~-------~---~~~~~~   59 (330)
T 3e9m_A            3 LDKIRYGIMSTAQIVPRF----VAGLRES-A-QAEVRGIASRRLENAQ--KM--AKEL---AI-------P---VAYGSY   59 (330)
T ss_dssp             CCCEEEEECSCCTTHHHH----HHHHHHS-S-SEEEEEEBCSSSHHHH--HH--HHHT---TC-------C---CCBSSH
T ss_pred             CCCCEEEEECCHHHHHHH----HHHHHHC-C-CCEEEEEECCCHHHHH--HH--HHHC---CC-------C---EECCCH
T ss_conf             888589999883999999----9999748-9-9289999889999999--99--9983---99-------8---041999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+..+|+|+..--|..+..+++.+=+.  |++++
T Consensus        60 ~~ll~~~~iD~V~I~tp~~~H~~~~~~al~~--gk~v~   95 (330)
T 3e9m_A           60 EELCKDETIDIIYIPTYNQGHYSAAKLALSQ--GKPVL   95 (330)
T ss_dssp             HHHHHCTTCSEEEECCCGGGHHHHHHHHHHT--TCCEE
T ss_pred             HHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCCEE
T ss_conf             9995489999899899707689999999985--99576


No 57 
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=86.76  E-value=0.28  Score=26.95  Aligned_cols=94  Identities=14%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+ |||.|+....-|..|    +.+++.. .+++++.|+.++..+..  +.+  .+++.   + + .       +.+...
T Consensus         1 M~-irv~iiG~G~~g~~h----~~~~~~~-~~~~~l~~v~d~~~~~~--~~~--~~~~~---~-~-~-------~~~~~~   58 (344)
T 3mz0_A            1 MS-LRIGVIGTGAIGKEH----INRITNK-LSGAEIVAVTDVNQEAA--QKV--VEQYQ---L-N-A-------TVYPND   58 (344)
T ss_dssp             CC-EEEEEECCSHHHHHH----HHHHHHT-CSSEEEEEEECSSHHHH--HHH--HHHTT---C-C-C-------EEESSH
T ss_pred             CC-EEEEEECCHHHHHHH----HHHHHHC-CCCCEEEEEECCCHHHH--HHH--HHHHC---C-C-C-------CEECCH
T ss_conf             97-049999982999999----9999842-89968999989999999--999--99858---9-9-8-------067999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+.+||+|+.---|.++..+++.+-+.  |++++
T Consensus        59 ~~ll~~~~~D~V~i~tp~~~H~~~~~~al~~--gkhv~   94 (344)
T 3mz0_A           59 DSLLADENVDAVLVTSWGPAHESSVLKAIKA--QKYVF   94 (344)
T ss_dssp             HHHHHCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCCCCHHHHHHHHHHC--CCCEE
T ss_conf             9995599988899626521159999999854--99726


No 58 
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus}
Probab=86.71  E-value=0.32  Score=26.54  Aligned_cols=81  Identities=20%  Similarity=0.353  Sum_probs=48.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+..||+|+=-++.   ....+.+-|++. + ++++.|-..+.-                    |              .
T Consensus         1 M~m~~ILIvDD~~~---~r~~l~~~L~~~-~-~~~vv~~a~~g~--------------------e--------------a   41 (133)
T 3b2n_A            1 MSLTSLIIAEDQNM---LRQAMVQLIKLH-G-DFEILADTDNGL--------------------D--------------A   41 (133)
T ss_dssp             --CEEEEEECSCHH---HHHHHHHHHHHH-S-SEEEEEEESCHH--------------------H--------------H
T ss_pred             CCCCEEEEEECCHH---HHHHHHHHHHHC-C-CEEEEEEECCHH--------------------H--------------H
T ss_conf             99999999929999---999999999868-9-969999989999--------------------9--------------9


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             86100128886898-5117765-7999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+++.+||++++ +.-||.| +.+++.+|+..+++|++-+
T Consensus        42 l~~~~~~~pDlvllDi~mP~~~G~e~~~~ir~~~~~~~vI~l   83 (133)
T 3b2n_A           42 MKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIV   83 (133)
T ss_dssp             HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             999985699999995778999889999999986899968999


No 59 
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 2i80_A*
Probab=86.39  E-value=0.19  Score=28.01  Aligned_cols=137  Identities=9%  Similarity=0.134  Sum_probs=62.8

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             987459999768214789-----999999999738998399997178999478806504445311013674664599999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      |++.||.|++|..|..--     |..++++|++. +.++...++.-     .|.-...+.......-.-+..........
T Consensus         1 m~k~~I~vl~GG~S~E~~iSl~Sg~~v~~aL~~~-g~~v~~i~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (364)
T 2i87_A            1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKD-KYHVDIIYITN-----DGDWRKQNNITAEIKSTDELHLENGEALE   74 (364)
T ss_dssp             --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTT-TEEEEEEEECT-----TCCEEEECCCCSCCCSGGGSCGGGSEEEC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCEEEEEEECC-----CCCEEECCCCCHHHCCCCCCCCCCCCCCH
T ss_conf             9998899995918754399999999999987773-99799999848-----98755258741111157510237664100


Q ss_pred             HHHHHHHHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
Q ss_conf             99999861001288868985--1177657999986630134631111002211003663557999998640156774223
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEV  153 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~  153 (383)
                      ....+.+.....++|+|+..  -.+|-+-.+...+...  +||.+-   |        ......-..|+..+     +.+
T Consensus        75 ~~~~~~~~~~~~~~D~v~~~~hG~~gedg~~q~~le~~--~ipy~G---~--------~~~a~~i~~DK~~~-----k~~  136 (364)
T 2i87_A           75 ISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVL--DVPYVG---N--------GVLSAASSMDKLVM-----KQL  136 (364)
T ss_dssp             SSGGGGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHH--TCCBSS---C--------CHHHHHHHHSHHHH-----HHH
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHC--CCCCCC---C--------CHHHHHHCCHHHHH-----HHH
T ss_conf             88888877524688889992678543265999999855--888347---9--------82454310038999-----999


Q ss_pred             HHCCCCCCE
Q ss_conf             200255314
Q gi|254780767|r  154 MQRLGGPPT  162 (383)
Q Consensus       154 f~k~~~~~~  162 (383)
                      +++ .|+++
T Consensus       137 l~~-~gIpt  144 (364)
T 2i87_A          137 FEH-RGLPQ  144 (364)
T ss_dssp             HHH-HTCCC
T ss_pred             HHH-CCCCC
T ss_conf             998-69986


No 60 
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=86.20  E-value=0.3  Score=26.74  Aligned_cols=93  Identities=16%  Similarity=0.103  Sum_probs=57.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++|||-|+.-   |..|...+...+++   .++++.|+..+.-+.+  +.+  .+.+   |          ..+.+...
T Consensus         2 MkkirigiiG~---g~~~~~~~~~~~~~---~~~elvav~d~~~~~~--~~~--~~~~---~----------~~~~~~~~   58 (336)
T 2p2s_A            2 MKKIRFAAIGL---AHNHIYDMCQQLID---AGAELAGVFESDSDNR--AKF--TSLF---P----------SVPFAASA   58 (336)
T ss_dssp             --CCEEEEECC---SSTHHHHHHHHHHH---TTCEEEEEECSCTTSC--HHH--HHHS---T----------TCCBCSCH
T ss_pred             CCCCEEEEECC---CHHHHHHHHHHHHC---CCCEEEEEECCCHHHH--HHH--HHHC---C----------CCCEECCH
T ss_conf             96056999936---88999999988650---8978999989999999--999--9877---9----------98378999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+...++|+|+..--|..+..+++.+=+.  |.+|+
T Consensus        59 ~ell~~~~iDaV~I~tp~~~H~~~~~~al~~--gk~Vl   94 (336)
T 2p2s_A           59 EQLITDASIDLIACAVIPCDRAELALRTLDA--GKDFF   94 (336)
T ss_dssp             HHHHTCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEEECCHHHHHHHHHHHHHC--CCEEE
T ss_conf             9995599989999968827789999999985--99089


No 61 
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV}
Probab=85.24  E-value=1.8  Score=21.57  Aligned_cols=39  Identities=18%  Similarity=0.438  Sum_probs=26.6

Q ss_pred             CCCCEEEEEECCCCHHHHHH-----HHHHHHHHHCCCCEEEEEEC
Q ss_conf             98745999976821478999-----99999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAG-----DLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a-----~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++|||.|++|..|-.-.-|     .++++|++. ..++...++.
T Consensus        20 M~k~kv~vl~GG~S~E~eiSl~Sa~~v~~~L~~~-~~~v~~i~i~   63 (386)
T 3e5n_A           20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQ-RFEPVLIGID   63 (386)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCEEEEEEEC
T ss_conf             8767799997978873899999999999975464-7989999985


No 62 
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=84.35  E-value=0.74  Score=24.18  Aligned_cols=40  Identities=13%  Similarity=0.296  Sum_probs=24.3

Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             86100128886898-5117765-7999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+...+||+||+ +.-||.| +.+.+.+|+..+++|+|..
T Consensus        40 l~~l~~~~~dliilD~~mP~~dGle~~~~ir~~~~~~pvI~l   81 (155)
T 1qkk_A           40 LAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILV   81 (155)
T ss_dssp             HHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEE
T ss_pred             HHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             998532698777654578999899999999972989948989


No 63 
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=84.34  E-value=0.48  Score=25.39  Aligned_cols=94  Identities=15%  Similarity=0.197  Sum_probs=52.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74599997682147899999999997389983999971789994788065044453110136746645999999999986
Q gi|254780767|r    3 SLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE   82 (383)
Q Consensus         3 ~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~   82 (383)
                      +|||-|+...    ..|..-++.+.+. .+++++.|+..+.-+.+  +.+  .+++++-            .+.+....+
T Consensus        23 ~lrigIIG~G----~ig~~h~~~~~~~-~~~~~lvav~d~~~~~a--~~~--a~~~~~~------------~~~y~~~~e   81 (357)
T 3ec7_A           23 TLKAGIVGIG----MIGSDHLRRLANT-VSGVEVVAVCDIVAGRA--QAA--LDKYAIE------------AKDYNDYHD   81 (357)
T ss_dssp             CEEEEEECCS----HHHHHHHHHHHHT-CTTEEEEEEECSSTTHH--HHH--HHHHTCC------------CEEESSHHH
T ss_pred             CEEEEEECCH----HHHHHHHHHHHHC-CCCCEEEEEECCCHHHH--HHH--HHHHCCC------------CCCCCCHHH
T ss_conf             3149999984----9999999999846-99978999978999999--999--9983999------------831199999


Q ss_pred             HCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             1001288868985117765799998663013463111
Q gi|254780767|r   83 LIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        83 ~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      .+.+..+|+|+..-.|.++..+++.+=+.  |++|+-
T Consensus        82 ll~~~~iDaV~I~Tp~~~H~~~~~~al~~--GkhVl~  116 (357)
T 3ec7_A           82 LINDKDVEVVIITASNEAHADVAVAALNA--NKYVFC  116 (357)
T ss_dssp             HHHCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEEE
T ss_pred             HHCCCCCCEEEECCCCCCCHHHHHHHHHC--CCEEEE
T ss_conf             96599988899889850000457889851--776997


No 64 
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=84.27  E-value=0.97  Score=23.40  Aligned_cols=38  Identities=26%  Similarity=0.381  Sum_probs=28.9

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             100128886898-5117765-7999986630134631111
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+++||++++ +.-|+.| +.+.+.+|+..+++|++-.
T Consensus        42 ~~~~~~~dlii~D~~mP~~~G~e~~~~ir~~~~~~~ii~l   81 (120)
T 1tmy_A           42 KYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC   81 (120)
T ss_dssp             HHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEE
T ss_pred             HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             9983699999996368999799999999975879978999


No 65 
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=84.18  E-value=2  Score=21.26  Aligned_cols=51  Identities=10%  Similarity=0.049  Sum_probs=29.1

Q ss_pred             CEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHC
Q ss_conf             50599853874301230511189998764027351262016633688999999604
Q gi|254780767|r  193 KKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKW  248 (383)
Q Consensus       193 ~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (383)
                      ..+.+..+|-..     ...+.+.+..+....|-+.++.+..+.+...+...+...
T Consensus       156 ~~vv~Ig~StGG-----p~al~~~l~~lp~~~~~ivivqHm~~~f~~~l~~~L~~~  206 (349)
T 1a2o_A          156 EKLIAIGASTGG-----TEAIRHVLQPLPLSSPAVIITQHMPPGFTRSFAERLNKL  206 (349)
T ss_dssp             TCEEEEEECTTH-----HHHHHHHHTTCCTTCCEEEEEECCCTTHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCC-----HHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             738999926889-----999999983399988968999948995468999987353


No 66 
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=83.89  E-value=1.6  Score=22.04  Aligned_cols=101  Identities=23%  Similarity=0.361  Sum_probs=56.7

Q ss_pred             CC-CCEEEEEECCCCHHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHH
Q ss_conf             98-74599997682147899999-99999738998399997178999478806504445311013674664599999999
Q gi|254780767|r    1 MN-SLKIAVIAGEISGDLLAGDL-IKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRIN   78 (383)
Q Consensus         1 m~-~mki~i~aGE~SGD~~~a~l-i~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~   78 (383)
                      |+ +||+.|+ |  ||-. |..| ++-|+.  .|.+++..+.|..-+..++.   +.....+--..          ....
T Consensus         1 MtkkikVaIi-G--tG~i-G~eLl~~lL~~--hp~~ei~av~s~~~ag~~l~---~a~~~~~~~~~----------~~~~   61 (312)
T 1nvm_B            1 MNQKLKVAII-G--SGNI-GTDLMIKVLRN--AKYLEMGAMVGIDAASDGLA---RAQRMGVTTTY----------AGVE   61 (312)
T ss_dssp             CCSCEEEEEE-C--CSHH-HHHHHHHHHHH--CSSEEEEEEECSCTTCHHHH---HHHHTTCCEES----------SHHH
T ss_pred             CCCCCEEEEE-C--CCHH-HHHHHHHHHHC--CCCCEEEEEEECCCCCCHHH---HHHHCCCCCCC----------CCEE
T ss_conf             9988769998-6--8699-99999999845--99868999994670342045---56662897555----------6521


Q ss_pred             HHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             998610012888689851177657999986630134631111
Q gi|254780767|r   79 QTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+.....+.|+|++-=..|.+...+..++....|+++|-.
T Consensus        62 ~~~~~~~~~~vDvVF~AtP~g~~~~~~~~~~~~~~g~~vIDl  103 (312)
T 1nvm_B           62 GLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             HHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             ECCCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHCCCEEEEC
T ss_conf             010003202476899868837777622058899789979966


No 67 
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=83.84  E-value=1  Score=23.18  Aligned_cols=40  Identities=18%  Similarity=0.440  Sum_probs=29.8

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             6100128886898-5117765-79999866301346311110
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      +.+.+++||++++ +.-||.| +.+.+.+|+...++|+|-.-
T Consensus        45 ~~l~~~~~dlvi~D~~mP~~dG~~~~~~ir~~~~~~piI~lt   86 (130)
T 3eod_A           45 ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS   86 (130)
T ss_dssp             HHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             998528988745742179998999999999609899899998


No 68 
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=83.78  E-value=0.64  Score=24.60  Aligned_cols=91  Identities=19%  Similarity=0.200  Sum_probs=53.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+ ||+-|+....-|.    ..++++++  .+++++.|+.++.-+.+  +..  -+++   |+..          .+...
T Consensus         1 Mt-lrvgiIG~G~~g~----~h~~~~~~--~~~~~ivav~d~~~~~~--~~~--a~~~---~~~~----------~~~~~   56 (344)
T 3ezy_A            1 MS-LRIGVIGLGRIGT----IHAENLKM--IDDAILYAISDVREDRL--REM--KEKL---GVEK----------AYKDP   56 (344)
T ss_dssp             -C-EEEEEECCSHHHH----HHHHHGGG--STTEEEEEEECSCHHHH--HHH--HHHH---TCSE----------EESSH
T ss_pred             CC-CEEEEECCHHHHH----HHHHHHHH--CCCCEEEEEECCCHHHH--HHH--HHHC---CCCC----------CCCCH
T ss_conf             97-2499999719999----99999972--89968999989899999--999--9983---9984----------02999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             8610012888689851177657999986630134631
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPI  117 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipv  117 (383)
                      .+.+.+.++|+|+..--|.++..+++++-+.  |++|
T Consensus        57 ~ell~~~~iD~V~I~tp~~~H~~~~~~al~~--gkhV   91 (344)
T 3ezy_A           57 HELIEDPNVDAVLVCSSTNTHSELVIACAKA--KKHV   91 (344)
T ss_dssp             HHHHHCTTCCEEEECSCGGGHHHHHHHHHHT--TCEE
T ss_pred             HHHHCCCCCCEEEECCCCHHHHHHHHHHHHC--CCCE
T ss_conf             9996499989999716311439999999976--9968


No 69 
>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X*
Probab=83.78  E-value=0.64  Score=24.57  Aligned_cols=94  Identities=11%  Similarity=0.124  Sum_probs=55.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+ +|+.|+....-|..|+..    |+...+.++++.|+.....+.+  +.+.  +++++          +   +.+...
T Consensus         1 M~-ik~giIG~G~~g~~~~~~----l~~~~~~~~~l~~v~d~~~~~~--~~~a--~~~~~----------~---~~~~~~   58 (334)
T 2o4u_X            1 MA-LRWGIVSVGLISSDFTAV----LQTLPRSEHQVVAVAARDLSRA--KEFA--QKHDI----------P---KAYGSY   58 (334)
T ss_dssp             -C-EEEEEECCSHHHHHHHHH----HTTSCTTTEEEEEEECSSHHHH--HHHH--HHHTC----------S---EEESSH
T ss_pred             CC-EEEEEECCCHHHHHHHHH----HHHCCCCCEEEEEEECCCHHHH--HHHH--HHCCC----------C---CEECCH
T ss_conf             96-679999993999999999----9858588859999987999999--9999--98399----------8---254899


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+....+|+|+..-.|..+..+++.+=++  |++|+
T Consensus        59 ~~ll~~~~iD~v~I~tp~~~h~~~~~~al~~--gkhVl   94 (334)
T 2o4u_X           59 EELAKDPNVEVAYVGTQHPQHKAAVMLCLAA--GKAVL   94 (334)
T ss_dssp             HHHHTCTTCSEEEECCCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHC--CCEEE
T ss_conf             9995699998899905654114778999986--99188


No 70 
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural genomics, PSI-2; 2.30A {Salmonella typhimurium LT2}
Probab=83.58  E-value=2.2  Score=21.10  Aligned_cols=107  Identities=20%  Similarity=0.280  Sum_probs=60.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHH-HHHHHHHCCCCEEEEEECCHHH----HHCCCEE------EECHHH-------CCEEE
Q ss_conf             9874599997682147899999-9999973899839999717899----9478806------504445-------31101
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDL-IKSLKEMVSYPINLVGVGGPSL----QKEGLVS------LFDFSE-------LSVIG   62 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~l-i~~Lk~~~~~~~~~~giGG~~m----~~~G~~~------~~~~~~-------l~v~G   62 (383)
                      |+..+|.|+.||++|  .|..+ ++++.+..-....+.=+|....    ++.++..      +-+.++       +.+.-
T Consensus         4 M~~k~IaIT~GDPaG--IGpEIilKal~~~~~~~~~~vvig~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~v~d   81 (330)
T 2hi1_A            4 METKTVAITMGDPAG--IGPEIIVKALSEDGLNGAPLVVIGCLATLKRLQAKGITPNVELRAIERVAEARFAPGIIHVID   81 (330)
T ss_dssp             -CCCCEEEECCCTTT--THHHHHHHHHTSTTTTTCSEEEEECHHHHHHHHHTTSSCCCEEEEESSGGGCCCCTTEEEEEE
T ss_pred             CCCCEEEEECCCCCH--HHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCEEEEEC
T ss_conf             899918998998627--389999999967350489989997899999999975899950343688666306788157731


Q ss_pred             --HHH--HH-------HHHHHHHHHHHHHHHHCCCCCCCEEEE------------ECHHHHHHHHHHHHH
Q ss_conf             --367--46-------645999999999986100128886898------------511776579999866
Q gi|254780767|r   63 --IMQ--VV-------RHLPQFIFRINQTVELIVSSKPDVLLI------------VDNPDFTHRVAKRVR  109 (383)
Q Consensus        63 --~~e--vl-------~~~~~~~~~~~~~~~~i~~~~Pd~vi~------------iD~pgFnl~lak~lk  109 (383)
                        +.+  .+       .+=....+.++...+.+++.+-|++|+            .+|||-.--||++..
T Consensus        82 ~~~~~~~~~~~G~~~~~~g~~a~~~l~~A~~~~~~g~~dalVT~PInK~~i~~aG~~f~GHTE~La~~~~  151 (330)
T 2hi1_A           82 EPLAQPEALEAGKVQAQAGDLAYRCVKRATELALRGDVQAIATAPLNKEALHLAGHNYPGHTELLATLTH  151 (330)
T ss_dssp             CCCSCGGGCCTTSCCHHHHHHHHHHHHHHHHHHHTTSCSEEEECCCCHHHHHHTTCCCSSHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHCC
T ss_conf             5545564333575305668999999999999974388617983784477897648997865188776404


No 71 
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=83.40  E-value=0.79  Score=24.00  Aligned_cols=39  Identities=23%  Similarity=0.432  Sum_probs=24.7

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             6100128886898-5117765-7999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+.+||++++ +.-|+.| +.+++.+|+..+++|+|..
T Consensus        43 ~~~~~~~pdlillDi~MP~~dG~el~~~i~~~~p~~~iI~l   83 (141)
T 3cu5_A           43 QIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFM   83 (141)
T ss_dssp             HHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             99986799989973689999999999999975879939999


No 72 
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=83.14  E-value=1.3  Score=22.53  Aligned_cols=98  Identities=13%  Similarity=0.100  Sum_probs=46.0

Q ss_pred             CEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4599997-682147899999999997389983999971789994788065044453110136746645999999999986
Q gi|254780767|r    4 LKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE   82 (383)
Q Consensus         4 mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~   82 (383)
                      |||.|.+ |.  |-. ...|+++++.. ..++++.+|-..+-.+.|.+.   .......-+....+.+..-...-+.+.+
T Consensus         1 Mki~il~SG~--Gsn-l~~li~~~~~~-~l~~~I~~Visn~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (212)
T 1jkx_A            1 MNIVVLISGN--GSN-LQAIIDACKTN-KIKGTVRAVFSNKADAFGLER---ARQAGIATHTLIASAFDSREAYDRELIH   73 (212)
T ss_dssp             CEEEEEESSC--CHH-HHHHHHHHHTT-SSSSEEEEEEESCTTCHHHHH---HHHTTCEEEECCGGGCSSHHHHHHHHHH
T ss_pred             CEEEEEEECC--CHH-HHHHHHHHHCC-CCCCEEEEEEECCCCCCHHHH---HHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             9699998278--078-99999988719-999879999947987530135---4431312200112357998899999999


Q ss_pred             HCCCCCCCEEEEECHHH-HHHHHHHHH
Q ss_conf             10012888689851177-657999986
Q gi|254780767|r   83 LIVSSKPDVLLIVDNPD-FTHRVAKRV  108 (383)
Q Consensus        83 ~i~~~~Pd~vi~iD~pg-Fnl~lak~l  108 (383)
                      .+++.+||+++++-|+- +.-.+-...
T Consensus        74 ~l~~~~~Dliv~~g~~~il~~~~l~~~  100 (212)
T 1jkx_A           74 EIDMYAPDVVVLAGFMRILSPAFVSHY  100 (212)
T ss_dssp             HHGGGCCSEEEESSCCSCCCHHHHHHT
T ss_pred             HHHHHCCCEEEEECHHHHCCHHHHHHH
T ss_conf             999709999999361444588998763


No 73 
>2f48_A Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=82.97  E-value=2.3  Score=20.95  Aligned_cols=115  Identities=17%  Similarity=0.233  Sum_probs=68.3

Q ss_pred             CCCEEEEEE-CCCCHHHHHH--HHHHHHHHHCCCCEEEEEE-CCHHHHHCCCEEEECHHH-----CCEEEHHHHHHH-HH
Q ss_conf             874599997-6821478999--9999999738998399997-178999478806504445-----311013674664-59
Q gi|254780767|r    2 NSLKIAVIA-GEISGDLLAG--DLIKSLKEMVSYPINLVGV-GGPSLQKEGLVSLFDFSE-----LSVIGIMQVVRH-LP   71 (383)
Q Consensus         2 ~~mki~i~a-GE~SGD~~~a--~li~~Lk~~~~~~~~~~gi-GG~~m~~~G~~~~~~~~~-----l~v~G~~evl~~-~~   71 (383)
                      ++|||-|+. |.++--++++  .+++++++. +++.+++|+ +|.+---.|-  +.++++     +.-.|=++.+.. ..
T Consensus        71 ~~~~IgIl~sGG~aPG~N~vI~gvv~~~~~~-~~~~~v~G~~~G~~GL~~~~--~i~Lt~~~v~~~~n~GG~~l~~s~r~  147 (555)
T 2f48_A           71 KALNIGIILSGGPAPGGHNVISGVFDAIKKF-NPNSKLFGFKGGPLGLLEND--KIELTESLINSYRNTGGFDIVSSGRT  147 (555)
T ss_dssp             SCCEEEEEEBSSCCTTHHHHHHHHHHHHHHH-CTTCEEEEETTTTHHHHTTC--EEEECHHHHHHHTTCCSSTTTCCBCC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHCCCC--EEECCHHHHHHHHHCCCEEEECCCCC
T ss_conf             8876999780787488999999999999985-89989999825448757899--99999899845871799284179999


Q ss_pred             H--HHHHHHHHHHHCCCCCCCEEEEEC---HHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             9--999999998610012888689851---17765799998663013463111
Q gi|254780767|r   72 Q--FIFRINQTVELIVSSKPDVLLIVD---NPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        72 ~--~~~~~~~~~~~i~~~~Pd~vi~iD---~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      +  -...++++.+.+++.+-|.+|.|-   +-.--..|+++.++.+.++++|.
T Consensus       148 ~~~~~e~~~~~~~~l~~~~Id~LviIGGddS~~~A~~Lae~~~~~~~~i~VIg  200 (555)
T 2f48_A          148 KIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIG  200 (555)
T ss_dssp             CCCSHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             97777899999999986389889997876899999999999986167960898


No 74 
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=82.83  E-value=0.84  Score=23.79  Aligned_cols=41  Identities=12%  Similarity=0.246  Sum_probs=25.8

Q ss_pred             HHHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             986100128886898-5117765-7999986630134631111
Q gi|254780767|r   80 TVELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      ..+.+...+||++++ ++-||.+ +.+.+.+++..+.+|+|-+
T Consensus        40 al~~~~~~~pDlvllD~~mp~~~G~~~l~~i~~~~~~~~iI~l   82 (208)
T 1yio_A           40 FLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFI   82 (208)
T ss_dssp             HHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             9998604699989985788997657999998860566517987


No 75 
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=82.33  E-value=0.97  Score=23.40  Aligned_cols=39  Identities=15%  Similarity=0.315  Sum_probs=27.8

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             6100128886898-5117765-7999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+.+||+|++ +.-||.| +.+.+.+|+..+.+|++-+
T Consensus        45 ~~~~~~~pDlvllDi~mP~~~G~e~~~~ir~~~~~~~iivl   85 (153)
T 3cz5_A           45 RLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIF   85 (153)
T ss_dssp             HHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEE
T ss_pred             HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             99754699689996457998789999999985899968999


No 76 
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=82.28  E-value=2.4  Score=20.78  Aligned_cols=89  Identities=16%  Similarity=0.210  Sum_probs=47.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCE-EEEE-ECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             874599997682147899999999997389983-9999-71789994788065044453110136746645999999999
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPI-NLVG-VGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~-~~~g-iGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      +.|||+|+.+.  |--||  |..+|++ .+ .+ +++- -|-+.|...+-....|..+                   ...
T Consensus        20 ~~mkvLviGsG--grEhA--ia~~l~~-s~-~~~~v~~~pgN~g~~~~~~~~~i~~~d-------------------~~~   74 (451)
T 2yrx_A           20 SHMNVLVIGRG--GREHA--IAWKAAQ-SP-LVGKLYVAPGNPGIADVAELVHIDELD-------------------IEA   74 (451)
T ss_dssp             SSEEEEEEECS--HHHHH--HHHHHHT-CT-TEEEEEEEECCTTGGGTSEECCCCTTC-------------------HHH
T ss_pred             CCCEEEEECCC--HHHHH--HHHHHHH-CC-CCCEEEEECCCHHHHHHCEEEECCCCC-------------------HHH
T ss_conf             29789998978--89999--9999974-98-989899978987998517046248689-------------------999


Q ss_pred             HHHHCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898511776-579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+++++||.||. ..-.. -..++-.+++.  |+|++
T Consensus        75 i~~~~~~~~iD~vvv-GpE~pL~~gl~D~l~~~--gi~v~  111 (451)
T 2yrx_A           75 LVQFAKQQAIDLTIV-GPEAPLASGIVDRFMAE--GLRIF  111 (451)
T ss_dssp             HHHHHHHTTCSEEEE-CSHHHHHTTHHHHHHHT--TCCEE
T ss_pred             HHHHHHHHCCCEEEE-CCCHHHHHHHHHHHHHC--CCCEE
T ss_conf             999999839999998-97578888999999506--99400


No 77 
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogenase; structural genomics, short-chain dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.21  E-value=2.4  Score=20.76  Aligned_cols=89  Identities=17%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             CCCC---EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHH
Q ss_conf             9874---5999976821478999999999973899839999717899947880650444531101367466459999999
Q gi|254780767|r    1 MNSL---KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRI   77 (383)
Q Consensus         1 m~~m---ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~   77 (383)
                      |++|   |+.+++|-.||  .|..+.+.|-+. +-++-+.+...++.++.-.+..-....-.+..+.--+...-.+...+
T Consensus         1 M~~~L~GKvalITGas~G--IG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (267)
T 2gdz_A            1 MAHMVNGKVALVTGAAQG--IGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             -CCCCTTCEEEEETTTSH--HHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
T ss_conf             997649988999285878--999999999987-99899997978889999999997527984899995279999999999


Q ss_pred             HHHHHHCCCCCCCEEEE
Q ss_conf             99986100128886898
Q gi|254780767|r   78 NQTVELIVSSKPDVLLI   94 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~   94 (383)
                      +++.+..  -+.|++|-
T Consensus        78 ~~~~~~~--g~iDiLVn   92 (267)
T 2gdz_A           78 RKVVDHF--GRLDILVN   92 (267)
T ss_dssp             HHHHHHH--SCCCEEEE
T ss_pred             HHHHHHC--CCCCEEEE
T ss_conf             9999972--99889998


No 78 
>1e4e_A Vancomycin/teicoplanin A-type resistance protein VANA; ligase, cell WALL, antibiotic resistance, membrane, plasmid; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=81.78  E-value=0.81  Score=23.92  Aligned_cols=134  Identities=13%  Similarity=0.189  Sum_probs=64.3

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCC------EEEHHHHHHH
Q ss_conf             987459999768214789-----99999999973899839999717899947880650444531------1013674664
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELS------VIGIMQVVRH   69 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~------v~G~~evl~~   69 (383)
                      |++|||.|++|..|...-     |..+.++|++. ..++...++.     ..|.-...+.....      .....+.-..
T Consensus         1 M~k~ki~vl~GG~S~E~~vSl~Sg~~v~~aL~~~-~y~v~~i~i~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (343)
T 1e4e_A            1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKE-KYEPLYIGIT-----KSGVWKMCEKPCAEWENENCYSAVLSPDKK   74 (343)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC-----TTSCEEEESCCCTTCCCTTCEEEEECSCTT
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCEEEEEEEC-----CCCCEEECCCCHHHHHCCCCCCEEECCCCC
T ss_conf             9987899996957842899999999999975162-8969999886-----999678557615554225664223357633


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             59999999999861001288868985--1177657999986630134631111002211003663557999998640156
Q gi|254780767|r   70 LPQFIFRINQTVELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISIL  147 (383)
Q Consensus        70 ~~~~~~~~~~~~~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~if  147 (383)
                      ...   ...+........+||+|+-+  -..|=|-.+...|...  |||.+.           ......+-..|+.++  
T Consensus        75 ~~~---~~~~~~~~~~~~~~D~vf~~lhG~~GEdg~iq~~le~~--gipy~G-----------s~~~~s~l~~DK~~~--  136 (343)
T 1e4e_A           75 MHG---LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELS--GIPFVG-----------CDIQSSAICMDKSLT--  136 (343)
T ss_dssp             TCE---EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHH--TCCBSS-----------CCHHHHHHHHSHHHH--
T ss_pred             CCC---HHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHC--CCCCCC-----------CCHHHHHHHCCCHHH--
T ss_conf             220---12202310134567789988778775460999999986--998616-----------857999986470666--


Q ss_pred             CCCHHHHHCCCCCCE
Q ss_conf             774223200255314
Q gi|254780767|r  148 PFEKEVMQRLGGPPT  162 (383)
Q Consensus       148 pFE~~~f~k~~~~~~  162 (383)
                         ++++++ .|+++
T Consensus       137 ---k~il~~-~gI~t  147 (343)
T 1e4e_A          137 ---YIVAKN-AGIAT  147 (343)
T ss_dssp             ---HHHHHH-TTCBC
T ss_pred             ---HHHHHH-CCCCC
T ss_conf             ---889998-09998


No 79 
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=81.71  E-value=2.5  Score=20.64  Aligned_cols=164  Identities=15%  Similarity=0.208  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEE----------CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf             999999999861001288868985----------1177657999986630134631111002211003663557999998
Q gi|254780767|r   72 QFIFRINQTVELIVSSKPDVLLIV----------DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYIN  141 (383)
Q Consensus        72 ~~~~~~~~~~~~i~~~~Pd~vi~i----------D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d  141 (383)
                      ++++...++.   +.++|+++..+          |-.+    +++.+++. .++||+++-+|.+=   ..-..-....+.
T Consensus        84 ~L~~~I~ei~---~~~~P~~I~V~sTC~seiIGdDl~~----v~~~~~~~-~~ipVv~v~~~gf~---gs~~~G~d~al~  152 (460)
T 2xdq_A           84 ELKRLCLEIK---RDRNPSVIVWIGTCTTEIIKMDLEG----LAPKLEAE-IGIPIVVARANGLD---YAFTQGEDTVLA  152 (460)
T ss_dssp             HHHHHHHHHH---HHHCCSEEEEEECHHHHHTTCCHHH----HHHHHHHH-HSSCEEEEECCTTT---CCTTHHHHHHHH
T ss_pred             HHHHHHHHHH---HCCCCCEEEEECCCCHHHHCCCHHH----HHHHHHHH-CCCCEEEEECCCCC---CCHHHHHHHHHH
T ss_conf             9999999998---6059988999767608875776999----99997653-19807999558866---768899999999


Q ss_pred             HHCCCCCCCHH-------------------HH-------HCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEE
Q ss_conf             64015677422-------------------32-------00255314763882112210013558889761876556505
Q gi|254780767|r  142 QVISILPFEKE-------------------VM-------QRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKI  195 (383)
Q Consensus       142 ~~~~ifpFE~~-------------------~f-------~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I  195 (383)
                      .++--+|-..+                   .-       ....+.+...+|+ +.|...  ..-....++.|+.    ..
T Consensus       153 alv~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~d~~e--~~~~~ll~~~Gi~----v~  225 (460)
T 2xdq_A          153 AMAARCPTSTAISDPEERNPIQRLLNFGKKKEEVQAQSSQYHPHPPLVLFGS-LPDPVV--TQLTLELKKQGIK----VS  225 (460)
T ss_dssp             HHHTTCCCCC-----------------------------CCCSCCCEEEESC-CCHHHH--HHHHHHHGGGTCC----EE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC-CCCCHH--HHHHHHHHHCCCC----CC
T ss_conf             9999831045766666543244456777631344420023304885587367-663116--7789999865986----32


Q ss_pred             EEEECCCCCCHHHHC---------CCHHHHHHHHHHCCC--CCEEEECCC-CCHHHHHHHHHHHCCCCCE
Q ss_conf             998538743012305---------111899987640273--512620166-3368899999960488850
Q gi|254780767|r  196 LLLPGSRAQEIYKIL---------PFFESAVASLVKRNP--FFRFSLVTV-SSQENLVRCIVSKWDISPE  253 (383)
Q Consensus       196 ~llPGSR~~EI~~~l---------P~~l~~~~~l~~~~~--~~~~~i~~~-~~~~~~~~~~~~~~~~~~~  253 (383)
                      .++||.+..|+....         |.+.+++..+.+++.  .+....|.. .+...+++...+..+.+..
T Consensus       226 ~~~pg~~~~el~~~~~a~~~i~~~~~~~~~a~~l~~~~g~p~i~~~~PiGi~~T~~~l~~ia~~~g~~~~  295 (460)
T 2xdq_A          226 GWLPAKRYTELPVIDEGYYVAGVNPFLSRTATTLIRRRKCQLITAPFPIGPDGTRTWIEQICATFGIQPQ  295 (460)
T ss_dssp             EEESCSSGGGCCCCCTTCEEEESSTTCHHHHHHHHHTTCCEEECCCCSBHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHH
T ss_conf             3459999999997544021110488789999999997299716248872779999999999999688925


No 80 
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes}
Probab=81.47  E-value=0.75  Score=24.14  Aligned_cols=36  Identities=17%  Similarity=0.271  Sum_probs=26.1

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             0128886898-5117765-7999986630134631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+||+||+ +.-||.| +.+.+.+|+..+++|+|-.
T Consensus        48 ~~~~~DlvilD~~mP~~dG~el~~~ir~~~~~~piI~l   85 (137)
T 3hdg_A           48 GLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVI   85 (137)
T ss_dssp             HHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEEC
T ss_pred             HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             74799899973789999899999999950989958999


No 81 
>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12}
Probab=80.67  E-value=0.65  Score=24.55  Aligned_cols=37  Identities=32%  Similarity=0.453  Sum_probs=26.8

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             00128886898-5117765-7999986630134631111
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+||++++ +.-||.| +.+.+.+|++.+.+|++-+
T Consensus        42 ~~~~~pDlvilD~~mP~~~G~e~~~~lr~~~~~~~iivl   80 (134)
T 3f6c_A           42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIV   80 (134)
T ss_dssp             HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             872699999995999999899999999952999838999


No 82 
>3crn_A Response regulator receiver domain protein, CHEY- like; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=80.51  E-value=1.2  Score=22.88  Aligned_cols=36  Identities=17%  Similarity=0.259  Sum_probs=25.0

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             0128886898-5117765-7999986630134631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+||++|+ +.-||.+ +.+.+.+|+..+++|+|..
T Consensus        44 ~~~~~dlvllD~~mp~~~G~el~~~lr~~~~~~piI~l   81 (132)
T 3crn_A           44 ENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMV   81 (132)
T ss_dssp             HHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             85799999970448996089999999984899989999


No 83 
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=79.82  E-value=2.1  Score=21.16  Aligned_cols=124  Identities=17%  Similarity=0.211  Sum_probs=67.1

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-------CHHHHHCCCEEE---------EC----------HHHCC
Q ss_conf             99997682147899999999997389983999971-------789994788065---------04----------44531
Q gi|254780767|r    6 IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG-------GPSLQKEGLVSL---------FD----------FSELS   59 (383)
Q Consensus         6 i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG-------G~~m~~~G~~~~---------~~----------~~~l~   59 (383)
                      -|+.||.++=+.- -.++++|.+. +-|+-=.|+-       ||--|.+....+         ++          -..+-
T Consensus        24 ~yltaG~P~~e~s-~~~l~~l~~~-G~D~iEiGiPfSDPvaDGpvIq~a~~raL~~G~~~~~~~~~~~~~r~~~~~~p~v  101 (271)
T 3nav_A           24 PFVTIGDPNPEQS-LAIMQTLIDA-GADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIG  101 (271)
T ss_dssp             EEEETTSSCHHHH-HHHHHHHHHT-TCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEE
T ss_pred             EEEECCCCCHHHH-HHHHHHHHHC-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEE
T ss_conf             8983718987899-9999999976-9999997899888777689999998887764860766766776642026788879


Q ss_pred             EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHH-HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf             101367466459999999999861001288868985117-7657999986630134631111002211003663557999
Q gi|254780767|r   60 VIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNP-DFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCA  138 (383)
Q Consensus        60 v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~p-gFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~  138 (383)
                      +||.+..+.++.     .++..+.+.+..-|.+|..|-| +-.-.+.+.+++.  |+..|++|+|+-   ...|++.+.+
T Consensus       102 lM~Y~N~i~~~G-----~e~F~~~~~~~Gv~GviipDLp~ee~~~~~~~~~~~--gl~~I~lvsptt---~~~Ri~~i~~  171 (271)
T 3nav_A          102 LLMYANLVYARG-----IDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKF--GIQPIFIAPPTA---SDETLRAVAQ  171 (271)
T ss_dssp             EEECHHHHHHTC-----HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHT--TCEEEEEECTTC---CHHHHHHHHH
T ss_pred             EEEEEHHHHHCC-----HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC--CCCEEEEECCCC---HHHHHHHHHH
T ss_conf             997504665528-----999999998769948994589815659999998767--971799944675---5889999986


Q ss_pred             HHH
Q ss_conf             998
Q gi|254780767|r  139 YIN  141 (383)
Q Consensus       139 ~~d  141 (383)
                      ..+
T Consensus       172 ~a~  174 (271)
T 3nav_A          172 LGK  174 (271)
T ss_dssp             HCC
T ss_pred             CCC
T ss_conf             188


No 84 
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=79.38  E-value=1.3  Score=22.45  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=28.2

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEEC
Q ss_conf             0128886898-5117765-799998663013463111100
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv~  122 (383)
                      .+++||++|+ +.-||.| +.+.+.+|+..+.+|++-..+
T Consensus        41 ~~~~~dlii~D~~mp~~dG~e~~~~lr~~~~~~pii~lt~   80 (121)
T 2pl1_A           41 NEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTA   80 (121)
T ss_dssp             HHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEES
T ss_pred             HCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEC
T ss_conf             4589989998899999874789999996399981899978


No 85 
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=79.29  E-value=3  Score=20.12  Aligned_cols=95  Identities=17%  Similarity=0.175  Sum_probs=56.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      ++||||.|+....-|-.|    ++.+.++ .+++++.|+.++.-..+  +..  -+++   |+..+          +...
T Consensus         6 ~kpirvgiIG~G~~g~~~----~~~~~~~-~~~~~l~~i~d~~~~~~--~~~--~~~~---~~~~~----------~~~~   63 (346)
T 3cea_A            6 RKPLRAAIIGLGRLGERH----ARHLVNK-IQGVKLVAACALDSNQL--EWA--KNEL---GVETT----------YTNY   63 (346)
T ss_dssp             CCCEEEEEECCSTTHHHH----HHHHHHT-CSSEEEEEEECSCHHHH--HHH--HHTT---CCSEE----------ESCH
T ss_pred             CCCCEEEEECCHHHHHHH----HHHHHHC-CCCCEEEEEECCCHHHH--HHH--HHHC---CCCCC----------CCCH
T ss_conf             997669999884999999----9999854-99968999987999999--999--9982---99851----------5999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             861001288868985117765799998663013463111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      .+.+.+.++|+|+..-.|..+..++..+=+.  |++|+-
T Consensus        64 ~~ll~~~~vD~v~I~tp~~~h~~~~~~al~~--Gk~V~~  100 (346)
T 3cea_A           64 KDMIDTENIDAIFIVAPTPFHPEMTIYAMNA--GLNVFC  100 (346)
T ss_dssp             HHHHTTSCCSEEEECSCGGGHHHHHHHHHHT--TCEEEE
T ss_pred             HHHHCCCCCCEEEEECHHHHHHHHHHHHHHC--CCEEEE
T ss_conf             9996489988899957176589999999864--985988


No 86 
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=78.98  E-value=1.2  Score=22.80  Aligned_cols=38  Identities=13%  Similarity=0.260  Sum_probs=25.4

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             100128886898-5117765-7999986630134631111
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+++.+||++++ +.-||.| +.+++.+|+..+..|++..
T Consensus        50 ~l~~~~~DlvilDi~mP~~dG~el~~~ir~~~~~~~iI~~   89 (143)
T 2qv0_A           50 FLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFI   89 (143)
T ss_dssp             HHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEE
T ss_pred             HHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf             9986699989987888889989999999954999808999


No 87 
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=78.85  E-value=1.4  Score=22.35  Aligned_cols=39  Identities=26%  Similarity=0.413  Sum_probs=28.7

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             100128886898-5117765-79999866301346311110
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+.+++||++|+ +.-||.| +.+++.+|+..+.+|++-.-
T Consensus        40 ~~~~~~~dlvilD~~mP~~~G~e~~~~ir~~~~~~pii~lt   80 (116)
T 3a10_A           40 KFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLT   80 (116)
T ss_dssp             HHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEE
T ss_pred             HHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEE
T ss_conf             99847999899836889999999999998439989799998


No 88 
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=78.62  E-value=1.2  Score=22.85  Aligned_cols=37  Identities=22%  Similarity=0.443  Sum_probs=27.5

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             0128886898-5117765-79999866301346311110
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+++||++|+ +.-||.+ +.+.+.+|+...++|++-.-
T Consensus        44 ~~~~~dliilD~~mP~~~G~el~~~ir~~~~~~pii~lt   82 (124)
T 1srr_A           44 TKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMT   82 (124)
T ss_dssp             HHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             807998899853699998899999999609999899998


No 89 
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=78.59  E-value=2  Score=21.39  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=45.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+..||+|+=-+++   ....+-+.|+. .  ++++......                                   .+.
T Consensus         1 M~~~~ILiVDDd~~---~r~~l~~~L~~-~--g~~v~~a~~~-----------------------------------~~a   39 (126)
T 1dbw_A            1 MQDYTVHIVDDEEP---VRKSLAFMLTM-N--GFAVKMHQSA-----------------------------------EAF   39 (126)
T ss_dssp             CCCCEEEEEESSHH---HHHHHHHHHHH-T--TCEEEEESCH-----------------------------------HHH
T ss_pred             CCCCEEEEEECCHH---HHHHHHHHHHH-C--CCEEEEECCH-----------------------------------HHH
T ss_conf             99998999969999---99999999998-7--9999998999-----------------------------------999


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             86100128886898-5117765-79999866301346311110
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+.+.+.+||++|+ +.-||.| +.+.+.+|+..+++|+|..-
T Consensus        40 l~~~~~~~~dlvi~D~~mP~~~G~~ll~~ir~~~~~~pvI~lT   82 (126)
T 1dbw_A           40 LAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT   82 (126)
T ss_dssp             HHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEE
T ss_conf             9997637998797103688888299999999619998399996


No 90 
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis W83}
Probab=77.66  E-value=3.4  Score=19.81  Aligned_cols=87  Identities=16%  Similarity=0.295  Sum_probs=52.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      ++.||.|+ |  .|.+ |..+++.|.+  .+++++.|+-...-+..+.    +...+..                   +-
T Consensus         8 kkirv~ii-G--~G~m-G~~~~~~l~~--~~~~elv~v~~~~~~~~~~----~~~~~~~-------------------~~   58 (304)
T 3bio_A            8 KKIRAAIV-G--YGNI-GRYALQALRE--APDFEIAGIVRRNPAEVPF----ELQPFRV-------------------VS   58 (304)
T ss_dssp             CCEEEEEE-C--CSHH-HHHHHHHHHH--CTTEEEEEEECC-----------CCTTSCE-------------------ES
T ss_pred             CCCEEEEE-C--CCHH-HHHHHHHHHC--CCCCEEEEEECCCHHHHHH----HCCCCCC-------------------HH
T ss_conf             98479998-9--8699-9999999973--9994899998589888443----2268786-------------------76


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             61001288868985117765799998663013463111
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      +.....++|++|....++++..+++.+=++  |++++-
T Consensus        59 d~~~~~~~D~vi~~t~~~~~~~~~~~~l~~--g~~vv~   94 (304)
T 3bio_A           59 DIEQLESVDVALVCSPSREVERTALEILKK--GICTAD   94 (304)
T ss_dssp             SGGGSSSCCEEEECSCHHHHHHHHHHHHTT--TCEEEE
T ss_pred             HHHHCCCCCEEEEECCCHHHHHHHHHHHHH--CCCEEE
T ss_conf             698635898799907954479999999983--897798


No 91 
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=77.01  E-value=0.71  Score=24.31  Aligned_cols=116  Identities=12%  Similarity=0.175  Sum_probs=60.0

Q ss_pred             CCCEEEEEE--CCCCHHHHHH--HHHHHHHHHCCCCEEEEEEC-CHH-HHHCCCEEEECHHHCCEEEHH----HHHHHHH
Q ss_conf             874599997--6821478999--99999997389983999971-789-994788065044453110136----7466459
Q gi|254780767|r    2 NSLKIAVIA--GEISGDLLAG--DLIKSLKEMVSYPINLVGVG-GPS-LQKEGLVSLFDFSELSVIGIM----QVVRHLP   71 (383)
Q Consensus         2 ~~mki~i~a--GE~SGD~~~a--~li~~Lk~~~~~~~~~~giG-G~~-m~~~G~~~~~~~~~l~v~G~~----evl~~~~   71 (383)
                      +++||-|++  |.+.| +.++  .++++.....+ ..+++|+= |=+ +-+...+.+.+++.-.+-++.    -+|.. .
T Consensus        96 ~~~rIgIltsGGdaPG-mNavIr~vv~~a~~~~~-~~~V~Gi~~G~~GLi~~~~~~~~~L~~~~v~~i~~~GGtiLGT-s  172 (487)
T 2hig_A           96 TETTIGIVTCGGICPG-LNDVIRSITLTGINVYN-VKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGS-S  172 (487)
T ss_dssp             GGCEEEEEECSSCCTT-HHHHHHHHHHHHHHHHC-CSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSCC-C
T ss_pred             CCCEEEEECCCCCCHH-HHHHHHHHHHHHHHHCC-CCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECC-C
T ss_conf             8858999885788476-89999999999999659-9389998411488605997541018999984088569706125-8


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEEE---CHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             999999999861001288868985---1177657999986630134631111
Q gi|254780767|r   72 QFIFRINQTVELIVSSKPDVLLIV---DNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        72 ~~~~~~~~~~~~i~~~~Pd~vi~i---D~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +...-.+++++.+++.+-|.+|.|   |+-.--..|++++++++.+||+|..
T Consensus       173 R~~e~~~~i~~~L~~~~Id~LivIGGdgS~~~A~~Lae~~~~~~~~i~VIGI  224 (487)
T 2hig_A          173 RGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGV  224 (487)
T ss_dssp             CSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             9985699999999984998799956747899999999998862898329984


No 92 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=76.83  E-value=1.5  Score=22.12  Aligned_cols=33  Identities=27%  Similarity=0.622  Sum_probs=15.5

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCE
Q ss_conf             128886898-5117765-79999866301346311
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPII  118 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi  118 (383)
                      +++||+||+ +.-|+.| +-+.+.+|+..+.+|+|
T Consensus        47 ~~~~dlvl~D~~mP~~~G~e~~~~i~~~~~~~pvi   81 (394)
T 3eq2_A           47 SEQPDLVICDLRMPQIDGLELIRRIRQTASETPII   81 (394)
T ss_dssp             HSCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEE
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf             38999999989789998999999998539998389


No 93 
>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=76.68  E-value=3.6  Score=19.63  Aligned_cols=90  Identities=14%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             CCCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             9874599997-682147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |++|||.|+. |..+...|    +.+++.  .+++++.|+..+.-..+  +..  .+++   |+ .+.       ...++
T Consensus         3 mkkikigiiG~G~~~~~~~----~~~l~~--~~~~~l~av~d~~~~~~--~~~--~~~~---~~-~~~-------~~~~~   61 (319)
T 1tlt_A            3 LKKLRIGVVGLGGIAQKAW----LPVLAA--ASDWTLQGAWSPTRAKA--LPI--CESW---RI-PYA-------DSLSS   61 (319)
T ss_dssp             --CEEEEEECCSTHHHHTH----HHHHHS--CSSEEEEEEECSSCTTH--HHH--HHHH---TC-CBC-------SSHHH
T ss_pred             CCCCEEEEEECCHHHHHHH----HHHHHH--CCCCEEEEEECCCHHHH--HHH--HHHH---CC-CCC-------CCHHH
T ss_conf             8788899993889999999----999973--99968999988999999--999--9982---99-822-------88999


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.     .+||+|+..-.|..+..+++.+=+.  |++++
T Consensus        62 l~-----~~~D~V~I~tp~~~H~~~~~~al~~--gkhv~   93 (319)
T 1tlt_A           62 LA-----ASCDAVFVHSSTASHFDVVSTLLNA--GVHVC   93 (319)
T ss_dssp             HH-----TTCSEEEECSCTTHHHHHHHHHHHT--TCEEE
T ss_pred             HH-----CCCCEEEEECCCHHHHHHHHHHHHC--CCEEE
T ss_conf             85-----6999999948866668999999861--98799


No 94 
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, ATP-binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium}
Probab=76.03  E-value=1.6  Score=22.04  Aligned_cols=39  Identities=18%  Similarity=0.499  Sum_probs=27.7

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             987459999768214789-----9999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++|||.|++|..|....     |..+.++|++. ..++...++.
T Consensus         1 m~k~ki~vl~GG~S~E~evSl~Sg~~v~~~L~~~-~~~v~~i~i~   44 (364)
T 3i12_A            1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKT-RFDVVLLGID   44 (364)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCHH-CCEEEEEEEC
T ss_conf             9987899996946873899999999999975654-7979999985


No 95 
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=75.49  E-value=3.9  Score=19.43  Aligned_cols=93  Identities=11%  Similarity=0.190  Sum_probs=57.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++.|+-|+....=|    .+.+.+|++. + ++++.|+..+....+  +.+.  +++   |+..          .+...
T Consensus         3 m~kik~giIG~G~i~----~~h~~~l~~~-~-~~~v~~v~d~~~~~~--~~~a--~~~---~~~~----------~~~~~   59 (329)
T 3evn_A            3 LSKVRYGVVSTAKVA----PRFIEGVRLA-G-NGEVVAVSSRTLESA--QAFA--NKY---HLPK----------AYDKL   59 (329)
T ss_dssp             --CEEEEEEBCCTTH----HHHHHHHHHH-C-SEEEEEEECSCSSTT--CC-----CC---CCSC----------EESCH
T ss_pred             CCCCEEEEECCHHHH----HHHHHHHHHC-C-CCEEEEEECCCHHHH--HHHH--HHC---CCCC----------EECCH
T ss_conf             888689999884999----9999999868-9-928999988999999--9999--985---9980----------66899


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+.++|+|+..-.|..++.+++.+=+.  |.+++
T Consensus        60 ~~ll~~~~~D~V~I~tp~~~H~~~~~~al~~--gk~vl   95 (329)
T 3evn_A           60 EDMLADESIDVIYVATINQDHYKVAKAALLA--GKHVL   95 (329)
T ss_dssp             HHHHTCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCEEE
T ss_conf             9996288988899058266555778999987--99899


No 96 
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92, PSI-2; 2.10A {Neptuniibacter caesariensis}
Probab=75.46  E-value=2.1  Score=21.13  Aligned_cols=17  Identities=12%  Similarity=0.122  Sum_probs=6.5

Q ss_pred             HCCCCCHHHHHHHHHHH
Q ss_conf             20548989999999998
Q gi|254780767|r  327 FNSMIRSEALVRWIERL  343 (383)
Q Consensus       327 iQ~~~~~~~i~~~~~~l  343 (383)
                      ++.-++++.+...+...
T Consensus       107 L~KP~~~~~L~~~i~~a  123 (154)
T 2rjn_A          107 LLKPWEDEDVFKVVEKG  123 (154)
T ss_dssp             EESSCCHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHH
T ss_conf             88979999999999999


No 97 
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=75.13  E-value=1.9  Score=21.41  Aligned_cols=34  Identities=12%  Similarity=0.273  Sum_probs=24.7

Q ss_pred             CCCCCCCEEEEECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             001288868985117765-7999986630134631111
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +...+||+|++   ||.| +.+.+.+|+....+|++-.
T Consensus        58 l~~~~~DlviL---p~~~G~ell~~ir~~~~~~piiil   92 (137)
T 2pln_A           58 MDIRNYDLVMV---SDKNALSFVSRIKEKHSSIVVLVS   92 (137)
T ss_dssp             HHHSCCSEEEE---CSTTHHHHHHHHHHHSTTSEEEEE
T ss_pred             HHCCCCCEEEE---ECCCCHHHHHHHHHCCCCCCEEEE
T ss_conf             97289999998---278763799999962889975999


No 98 
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.90  E-value=2  Score=21.36  Aligned_cols=35  Identities=20%  Similarity=0.384  Sum_probs=18.4

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             128886898-5117765-7999986630134631111
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +++||++++ +.-||.| +.+.+.+|+..+.+|+|-.
T Consensus        46 ~~~pdlillD~~mp~~~G~~l~~~ir~~~~~~piI~l   82 (137)
T 3cfy_A           46 RSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIA   82 (137)
T ss_dssp             HHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEE
T ss_pred             HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             4799999983899999889999999974899848999


No 99 
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima}
Probab=74.54  E-value=1  Score=23.27  Aligned_cols=41  Identities=29%  Similarity=0.415  Sum_probs=28.3

Q ss_pred             HHHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             986100128886898-5117765-7999986630134631111
Q gi|254780767|r   80 TVELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      ..+.+.+.+||+|++ |.-|+.| +.+.+.+|+..+.+|++-.
T Consensus        17 al~~~~~~~pdlv~~Di~mP~~~G~~~~~~i~~~~~~~~ii~~   59 (237)
T 3cwo_X           17 AVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC   59 (237)
T ss_dssp             THHHHHHHCCSCEEEECCSTTSSHHHHHHHHHHHSSSCCEEEE
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             9999984399999992878998999999999986899849999


No 100
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=74.52  E-value=4.1  Score=19.27  Aligned_cols=91  Identities=7%  Similarity=0.158  Sum_probs=55.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+++||.|+....-|..+..   ..++ . .+++++.++..++-++.+       +++   |..          +.+...
T Consensus         3 ~~~ikigiIG~G~~~~~~~~---~~~~-~-~~~~~l~~v~~~~~~~~~-------~~~---~~~----------~~~~s~   57 (358)
T 3gdo_A            3 LDTIKVGILGYGLSGSVFHG---PLLD-V-LDEYQISKIMTSRTEEVK-------RDF---PDA----------EVVHEL   57 (358)
T ss_dssp             TTCEEEEEECCSHHHHHTTH---HHHT-T-CTTEEEEEEECSCHHHHH-------HHC---TTS----------EEESST
T ss_pred             CCCCEEEEEECCHHHHHHHH---HHHH-C-CCCCEEEEEECCCHHHHH-------HHC---CCC----------CEECCH
T ss_conf             88867999909699999999---9982-3-899089999488999999-------867---998----------353999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+..+|+|+..-.|.++..++..+=+.  |++|+
T Consensus        58 ~ell~~~~~DaV~i~tp~~~H~~~~~~al~~--gk~V~   93 (358)
T 3gdo_A           58 EEITNDPAIELVIVTTPSGLHYEHTMACIQA--GKHVV   93 (358)
T ss_dssp             HHHHTCTTCCEEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCEEE
T ss_conf             9996599999999889768899999999865--99898


No 101
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=74.50  E-value=4.1  Score=19.27  Aligned_cols=44  Identities=20%  Similarity=0.180  Sum_probs=30.8

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
Q ss_conf             861001288868985117765799998663013463111100221100
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAW  128 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAW  128 (383)
                      .+.|..-+||+||.-+  +++-.+.+.+++.  ++|++++-..++..|
T Consensus        53 ~E~I~~l~PDlIi~~~--~~~~~~~~~l~~~--~i~~~~~~~~~~~~~   96 (260)
T 2q8p_A           53 VEAVKKLKPTHVLSVS--TIKDEMQPFYKQL--NMKGYFYDFDSLKGM   96 (260)
T ss_dssp             HHHHHHTCCSEEEEEG--GGHHHHHHHHHHH--TSCCEEECCSSHHHH
T ss_pred             HHHHHHCCCCEEEECC--CCCHHHHHHHHHC--CCCEEECCCCCHHHH
T ss_conf             9999725998897248--8608999999732--561663699999999


No 102
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=74.49  E-value=1.7  Score=21.76  Aligned_cols=22  Identities=9%  Similarity=0.190  Sum_probs=14.1

Q ss_pred             HHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             2420548989999999998449
Q gi|254780767|r  325 EYFNSMIRSEALVRWIERLSQD  346 (383)
Q Consensus       325 EliQ~~~~~~~i~~~~~~ll~d  346 (383)
                      .|+..-++++.+...+.+.++.
T Consensus       112 ~yl~KP~~~~~L~~~i~~~l~~  133 (153)
T 3hv2_A          112 RYLSKPWDDQELLLALRQALEH  133 (153)
T ss_dssp             EEECSSCCHHHHHHHHHHHHHH
T ss_pred             CEEECCCCHHHHHHHHHHHHHH
T ss_conf             7788989999999999999999


No 103
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=74.43  E-value=1.7  Score=21.84  Aligned_cols=90  Identities=14%  Similarity=0.170  Sum_probs=54.4

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      ++|||.|+.....|..+   .+..+++  .+++++.|+.....+.+  +..+  .+..                .+....
T Consensus         6 ~~irvgiIG~G~~g~~~---~~~~l~~--~~~~~lvav~d~~~~~~--~~~~--~~~~----------------~~~~~~   60 (364)
T 3e82_A            6 NTINIALIGYGFVGKTF---HAPLIRS--VPGLNLAFVASRDEEKV--KRDL--PDVT----------------VIASPE   60 (364)
T ss_dssp             -CEEEEEECCSHHHHHT---HHHHHHT--STTEEEEEEECSCHHHH--HHHC--TTSE----------------EESCHH
T ss_pred             CCCEEEEECCCHHHHHH---HHHHHHH--CCCCEEEEEECCCHHHH--HHHC--CCCC----------------EECCHH
T ss_conf             98859999481999999---9999971--98958999988989999--9647--7997----------------579999


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             6100128886898511776579999866301346311
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+....||+|+..--|.++..++.++=+.  |++|+
T Consensus        61 ell~~~~iD~V~I~tp~~~H~~~~~~al~~--gkhV~   95 (364)
T 3e82_A           61 AAVQHPDVDLVVIASPNATHAPLARLALNA--GKHVV   95 (364)
T ss_dssp             HHHTCTTCSEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCCCH
T ss_conf             995599999899828778867888899864--99541


No 104
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=74.34  E-value=1.8  Score=21.61  Aligned_cols=92  Identities=13%  Similarity=0.091  Sum_probs=55.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      +|+.|+.|+....-|..|    ++++++  .+++++.|+....-..+  +..  -+++   |+    +.       +...
T Consensus         3 ~~~lrvgiIG~G~~~~~h----~~~~~~--~~~~~v~~v~d~~~~~~--~~~--~~~~---~~----~~-------~~~~   58 (354)
T 3db2_A            3 YNPVGVAAIGLGRWAYVM----ADAYTK--SEKLKLVTCYSRTEDKR--EKF--GKRY---NC----AG-------DATM   58 (354)
T ss_dssp             CCCEEEEEECCSHHHHHH----HHHHTT--CSSEEEEEEECSSHHHH--HHH--HHHH---TC----CC-------CSSH
T ss_pred             CCCCEEEEECCCHHHHHH----HHHHHH--CCCCEEEEEECCCHHHH--HHH--HHHH---CC----CC-------CCCH
T ss_conf             898449999383999999----999985--89948999988999999--999--9981---99----83-------3899


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+.++|+|+..-.|.++..+++.+-+.  |++|+
T Consensus        59 ~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~--gk~V~   94 (354)
T 3db2_A           59 EALLAREDVEMVIITVPNDKHAEVIEQCARS--GKHIY   94 (354)
T ss_dssp             HHHHHCSSCCEEEECSCTTSHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCEEE
T ss_conf             9995699998899879778888889999978--99799


No 105
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=74.32  E-value=1.5  Score=22.14  Aligned_cols=19  Identities=0%  Similarity=0.123  Sum_probs=8.4

Q ss_pred             HHCCCCCHHHHHHHHHHHH
Q ss_conf             4205489899999999984
Q gi|254780767|r  326 YFNSMIRSEALVRWIERLS  344 (383)
Q Consensus       326 liQ~~~~~~~i~~~~~~ll  344 (383)
                      |+..-++.+.+...+..++
T Consensus       137 yl~KP~~~~~L~~~i~~vl  155 (157)
T 3hzh_A          137 FIVKPLDRAKVLQRVMSVF  155 (157)
T ss_dssp             EEESSCCHHHHHHHHHHTT
T ss_pred             EEECCCCHHHHHHHHHHHH
T ss_conf             9979899999999999996


No 106
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.21  E-value=4.2  Score=19.22  Aligned_cols=121  Identities=17%  Similarity=0.205  Sum_probs=56.7

Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE-------CCHHHHHCCCEEEEC---HH----------------HCCE
Q ss_conf             999768214789999999999738998399997-------178999478806504---44----------------5311
Q gi|254780767|r    7 AVIAGEISGDLLAGDLIKSLKEMVSYPINLVGV-------GGPSLQKEGLVSLFD---FS----------------ELSV   60 (383)
Q Consensus         7 ~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~gi-------GG~~m~~~G~~~~~~---~~----------------~l~v   60 (383)
                      |+.+|.++=|.- ..++++|.+. +-|+-=.|+       -||--|.+....+-.   +.                .+-.
T Consensus        22 y~taG~P~~~~~-~~~l~~l~~~-GaD~iEiGiPfSDP~aDGpvIq~a~~~al~~g~~~~~~~~~~~~~r~~~~~~plvl   99 (268)
T 1qop_A           22 FVTLGDPGIEQS-LKIIDTLIDA-GADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL   99 (268)
T ss_dssp             EEETTSSCHHHH-HHHHHHHHHT-TCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE
T ss_pred             EEECCCCCHHHH-HHHHHHHHHC-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             881707987999-9999999977-99999978988886544799999999999789867998767887653178877899


Q ss_pred             EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
Q ss_conf             0136746645999999999986100128886898511776-579999866301346311110022110036635579999
Q gi|254780767|r   61 IGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAY  139 (383)
Q Consensus        61 ~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~  139 (383)
                      |+....+.++.     ..+..+.+++..-|.+|.+|-|-= .-.+.+.+++.  |+..|.+|+|+-   ...|++.+.+.
T Consensus       100 m~Y~N~i~~~G-----~~~f~~~~~~~Gv~GliipDlp~ee~~~~~~~~~~~--~l~~I~lvaPtt---~~~ri~~i~~~  169 (268)
T 1qop_A          100 LMYANLVFNNG-----IDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRH--NIAPIFICPPNA---DDDLLRQVASY  169 (268)
T ss_dssp             EECHHHHHTTC-----HHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHT--TCEEECEECTTC---CHHHHHHHHHH
T ss_pred             EEECCCCCCCC-----HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHC--CCCEEEEEECCC---CHHHHHHHHHC
T ss_conf             98525112378-----789999999749866651588856669999999735--982699982689---77889998725


No 107
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=74.02  E-value=1.6  Score=22.05  Aligned_cols=17  Identities=6%  Similarity=0.026  Sum_probs=6.8

Q ss_pred             CCCCHHHHHHHHHHHHC
Q ss_conf             54898999999999844
Q gi|254780767|r  329 SMIRSEALVRWIERLSQ  345 (383)
Q Consensus       329 ~~~~~~~i~~~~~~ll~  345 (383)
                      +.++++.|.+++...++
T Consensus       118 Kp~~~~~L~~aI~~~~~  134 (152)
T 3eul_A          118 KDSTRTEIVKAVLDCAK  134 (152)
T ss_dssp             TTCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHC
T ss_conf             99999999999999987


No 108
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=73.77  E-value=3.7  Score=19.56  Aligned_cols=37  Identities=16%  Similarity=0.367  Sum_probs=22.7

Q ss_pred             HCCCCCCCEEEEEC-HHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             10012888689851-17765-7999986630134631111
Q gi|254780767|r   83 LIVSSKPDVLLIVD-NPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        83 ~i~~~~Pd~vi~iD-~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+++||++|+ | -||.+ +.+.+++|+..+++|+|-.
T Consensus        43 ~l~~~~~dlvll-D~mp~~dGl~l~~~ir~~~~~~piI~l   81 (142)
T 2qxy_A           43 FLRREKIDLVFV-DVFEGEESLNLIRRIREEFPDTKVAVL   81 (142)
T ss_dssp             HHTTSCCSEEEE-ECTTTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHHCCCCEEEE-CCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             998579999985-478631289999999986899978999


No 109
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=73.62  E-value=1.5  Score=22.24  Aligned_cols=89  Identities=10%  Similarity=0.177  Sum_probs=55.3

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      +|.|+.|+....-|..|    ++++++. + ++++.|+....-+.+-  ...  .+..   +             +....
T Consensus         9 ~~irv~iiG~G~~g~~h----~~~~~~~-~-~~eiv~v~d~~~~~~~--~~~--~~~~---~-------------~~~~~   62 (315)
T 3c1a_A            9 SPVRLALIGAGRWGKNY----IRTIAGL-P-GAALVRLASSNPDNLA--LVP--PGCV---I-------------ESDWR   62 (315)
T ss_dssp             CCEEEEEEECTTTTTTH----HHHHHHC-T-TEEEEEEEESCHHHHT--TCC--TTCE---E-------------ESSTH
T ss_pred             CCEEEEEECCCHHHHHH----HHHHHHC-C-CCEEEEEECCCHHHHH--HHC--CCCC---C-------------CCCHH
T ss_conf             99389999993999999----9999718-9-9489999879999999--753--5797---3-------------59999


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             6100128886898511776579999866301346311
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+.++|+|+..-.|++|+.+++.+=+.  |++|+
T Consensus        63 ell~~~~~D~V~I~tp~~~H~~~~~~al~~--gk~V~   97 (315)
T 3c1a_A           63 SVVSAPEVEAVIIATPPATHAEITLAAIAS--GKAVL   97 (315)
T ss_dssp             HHHTCTTCCEEEEESCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHCCCCCCEEEECCCHHHHHHHHHHHHHH--CCCHH
T ss_conf             995599999899928788879999999961--32211


No 110
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=72.47  E-value=1.5  Score=22.10  Aligned_cols=90  Identities=18%  Similarity=0.282  Sum_probs=45.8

Q ss_pred             CCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH-------HHHCCCEEE-ECHHHCCEEEHHHHHHHHHH
Q ss_conf             874599997-682147899999999997389983999971789-------994788065-04445311013674664599
Q gi|254780767|r    2 NSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPS-------LQKEGLVSL-FDFSELSVIGIMQVVRHLPQ   72 (383)
Q Consensus         2 ~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~-------m~~~G~~~~-~~~~~l~v~G~~evl~~~~~   72 (383)
                      .||||.|.+ |.  |-.. ..|+++.+.  +.++++.++..++       -++.|+... ++..+.            +.
T Consensus        11 ~p~riavl~SG~--Gsnl-~aLi~~~~~--~~~~~iv~vi~~~~~~~~~~A~~~gIp~~~i~~~~~------------~~   73 (215)
T 3da8_A           11 APARLVVLASGT--GSLL-RSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADH------------PS   73 (215)
T ss_dssp             SSEEEEEEESSC--CHHH-HHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHTTCCEEECCGGGS------------SS
T ss_pred             CCCEEEEEECCC--CHHH-HHHHHHHCC--CCCCEEEEEEECCCHHHHHHHHHCCCCEEEEECCCC------------CC
T ss_conf             988899998368--2659-999996377--999779999967856688999983997377405788------------99


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECHHHH-HHHHHHHH
Q ss_conf             9999999986100128886898511776-57999986
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIVDNPDF-THRVAKRV  108 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~iD~pgF-nl~lak~l  108 (383)
                      --..-.++.+.+++.+||++|++.|+-. .-.+-+..
T Consensus        74 r~~~~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~  110 (215)
T 3da8_A           74 RDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRF  110 (215)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHH
T ss_conf             9999999999987609999998461334688886422


No 111
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=71.67  E-value=2.6  Score=20.56  Aligned_cols=36  Identities=22%  Similarity=0.472  Sum_probs=27.1

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             0128886898-5117765-79999866301346311110
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+++||++++ +.-||.| +.+++.+|+. +.+|+|-.-
T Consensus        42 ~~~~~dlil~D~~mp~~~G~~l~~~ir~~-~~ipiI~lt   79 (121)
T 1zh2_A           42 ATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLS   79 (121)
T ss_dssp             HHHCCSEEEEESEETTEEHHHHHHHHHTT-CCCCEEEEE
T ss_pred             HHCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEEE
T ss_conf             71799999980999998979999999974-799099997


No 112
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5}
Probab=71.38  E-value=4.8  Score=18.79  Aligned_cols=119  Identities=14%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---------CHHHHHCCCEEEEC---------H----------HH
Q ss_conf             99997682147899999999997389983999971---------78999478806504---------4----------45
Q gi|254780767|r    6 IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG---------GPSLQKEGLVSLFD---------F----------SE   57 (383)
Q Consensus         6 i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG---------G~~m~~~G~~~~~~---------~----------~~   57 (383)
                      -|+.+|.++=|.-. .+++++-+.   ++.+.-+|         |+--|++....+-.         +          ..
T Consensus        21 ~y~t~G~P~~~~~~-~~~~~l~~~---G~d~iElGiPfSDP~aDGpvIq~a~~~al~~G~~~~~~~~~~~~~r~~~~~~p   96 (262)
T 2ekc_A           21 SYLMVGYPDYETSL-KAFKEVLKN---GTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIP   96 (262)
T ss_dssp             EEEETTSSCHHHHH-HHHHHHHHT---TCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred             EEEECCCCCHHHHH-HHHHHHHHC---CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             88828379868999-999999976---99999978999986544899999999999789977776654333102378878


Q ss_pred             CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHH
Q ss_conf             3110136746645999999999986100128886898511776-579999866301346311110022110036635579
Q gi|254780767|r   58 LSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKM  136 (383)
Q Consensus        58 l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~  136 (383)
                      +-+|+....+.++     -.++..+.+++..-|.+|..|-|-= .-.+...+++.  |+..|.+|+|+-   ...|++.+
T Consensus        97 ivlm~Y~N~i~~~-----G~~~f~~~~~~~Gv~gviipDlp~ee~~~~~~~~~~~--gl~~I~lvsp~t---~~~ri~~i  166 (262)
T 2ekc_A           97 FLLMTYYNPIFRI-----GLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKY--VLSFVPLGAPTS---TRKRIKLI  166 (262)
T ss_dssp             EEEECCHHHHHHH-----CHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHT--TCEECCEECTTC---CHHHHHHH
T ss_pred             EEEEECCCHHHHC-----CHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCCCC---HHHHHHHH
T ss_conf             8999504344006-----7899999999769757861588667667777675205--544676358888---68888888


Q ss_pred             HH
Q ss_conf             99
Q gi|254780767|r  137 CA  138 (383)
Q Consensus       137 ~~  138 (383)
                      .+
T Consensus       167 ~~  168 (262)
T 2ekc_A          167 CE  168 (262)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             75


No 113
>2jba_A Phosphate regulon transcriptional regulatory protein PHOB; transcription factor, sensory transduction, phosphate regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=71.20  E-value=3.2  Score=19.95  Aligned_cols=41  Identities=20%  Similarity=0.387  Sum_probs=28.6

Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEEE
Q ss_conf             86100128886898-5117765-7999986630--1346311110
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINYV  121 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~yv  121 (383)
                      .+.+.+++||++|+ +.-||.| +.+.+.+|+.  ..++|+|...
T Consensus        39 l~~l~~~~~dlii~D~~mp~~~G~~l~~~ir~~~~~~~~piI~ls   83 (127)
T 2jba_A           39 VNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLT   83 (127)
T ss_dssp             HTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEE
T ss_pred             HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             999971799999981889996289999999847877999099998


No 114
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=70.87  E-value=5  Score=18.72  Aligned_cols=74  Identities=18%  Similarity=0.253  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECH-HHHHH----HHHHH-----HHHHCCCCCCEEEECCCCCCC--CCCCHHH--H
Q ss_conf             999999999986100128886898511-77657----99998-----663013463111100221100--3663557--9
Q gi|254780767|r   71 PQFIFRINQTVELIVSSKPDVLLIVDN-PDFTH----RVAKR-----VRKKMPNLPIINYVCPSVWAW--REGRARK--M  136 (383)
Q Consensus        71 ~~~~~~~~~~~~~i~~~~Pd~vi~iD~-pgFnl----~lak~-----lkk~~~~ipvi~yv~PqvWAW--r~~R~k~--~  136 (383)
                      -++....+.+.+.+.+++||.+..=|. -+-|.    .++..     +-....++|+..|-+-|||-+  +.||+.|  +
T Consensus        42 ~Rl~~I~~~l~~ii~~~~pd~vaiE~~f~~~n~~sa~~l~~a~G~i~~~~~~~~i~i~~~~P~~vKk~vtG~G~A~K~qV  121 (158)
T 1hjr_A           42 SRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQV  121 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHTSSSSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
T ss_conf             99999999999999713973536989886238889999999999999999985996013688999999857997799999


Q ss_pred             HHHHHHHC
Q ss_conf             99998640
Q gi|254780767|r  137 CAYINQVI  144 (383)
Q Consensus       137 ~~~~d~~~  144 (383)
                      .+.+..++
T Consensus       122 ~~mv~~~l  129 (158)
T 1hjr_A          122 QHMVRTLL  129 (158)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
T ss_conf             99999981


No 115
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46}
Probab=70.80  E-value=2.7  Score=20.44  Aligned_cols=36  Identities=14%  Similarity=0.393  Sum_probs=21.5

Q ss_pred             CCCCCCEEEE-ECHH-----HHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             0128886898-5117-----765-7999986630134631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNP-----DFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~p-----gFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      ++.+||++++ +.-|     |.+ +.+.+.+|+..+.+|+|-.
T Consensus        44 ~~~~~dlillDl~mP~~~~~G~dGl~~l~~ir~~~~~ipvI~l   86 (140)
T 2qr3_A           44 REENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLF   86 (140)
T ss_dssp             HHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEE
T ss_pred             HHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             7279999999168877776775199999999986899828999


No 116
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=70.75  E-value=2.1  Score=21.14  Aligned_cols=33  Identities=12%  Similarity=-0.037  Sum_probs=16.3

Q ss_pred             EEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             05998538743012305111899987640273512620166
Q gi|254780767|r  194 KILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV  234 (383)
Q Consensus       194 ~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~  234 (383)
                      .+.++--|+.+      +-++++++...++  +...+..+.
T Consensus        92 vvI~iS~sG~t------~~~~~~~~~ak~~--g~~vI~IT~  124 (200)
T 1vim_A           92 VLVGISGSGET------TSVVNISKKAKDI--GSKLVAVTG  124 (200)
T ss_dssp             EEEEECSSSCC------HHHHHHHHHHHHH--TCEEEEEES
T ss_pred             EEEEECCCCCC------CCHHHHHHHHHHC--CCEEEEEEC
T ss_conf             89985799774------2169999999987--996999979


No 117
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=70.55  E-value=2.9  Score=20.31  Aligned_cols=36  Identities=28%  Similarity=0.525  Sum_probs=25.3

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             0128886898-5117765-7999986630134631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+||++++ +.-||.| +.+++.+|+..+..|++..
T Consensus        44 ~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~~ii~l   81 (136)
T 1mvo_A           44 ETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILML   81 (136)
T ss_dssp             HHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf             84599899826999999889999999854999859999


No 118
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=70.47  E-value=3.3  Score=19.88  Aligned_cols=23  Identities=0%  Similarity=0.107  Sum_probs=16.7

Q ss_pred             CCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             61242054898999999999844
Q gi|254780767|r  323 VPEYFNSMIRSEALVRWIERLSQ  345 (383)
Q Consensus       323 vPEliQ~~~~~~~i~~~~~~ll~  345 (383)
                      +-.|+.+-++++.|...+.++++
T Consensus       224 ~~~~l~KP~~~~~L~~~l~~~l~  246 (254)
T 2ayx_A          224 MDSCLSKPVTLDVIKQTLTLYAE  246 (254)
T ss_dssp             CEEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCHHHHHHHHHHHHH
T ss_conf             98999798999999999999999


No 119
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=70.19  E-value=3.1  Score=20.03  Aligned_cols=124  Identities=16%  Similarity=0.212  Sum_probs=61.4

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECH--HHCCEEEHHHHHHHHHHH
Q ss_conf             987459999768214789-----9999999997389983999971789994788065044--453110136746645999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDF--SELSVIGIMQVVRHLPQF   73 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~--~~l~v~G~~evl~~~~~~   73 (383)
                      |..|||.|++|..|...-     |..+.++|+    .+.....+.-     .|.-.+.+.  ..+..-...+..      
T Consensus         1 m~~~kI~vl~GG~S~E~eiSl~Sa~~v~~~l~----~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~------   65 (322)
T 2fb9_A            1 MEFMRVLLIAGGVSPEHEVSLLSAEGVLRHIP----FPTDLAVIAQ-----DGRWLLGEKALTALEAKAAPEGE------   65 (322)
T ss_dssp             CCCCCEEEEEECSSTTHHHHHHHHHHHHHHCS----SCEEEEEECT-----TSCEECHHHHHHHTTSSCCCCCC------
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCCCEEEEEC-----CCCEEECCCCHHHHHHCCCCCCH------
T ss_conf             99788999938787421989999999999669----8764799934-----78678436404332103576530------


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEEC--HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
Q ss_conf             99999998610012888689851--1776579999866301346311110022110036635579999986401567742
Q gi|254780767|r   74 IFRINQTVELIVSSKPDVLLIVD--NPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEK  151 (383)
Q Consensus        74 ~~~~~~~~~~i~~~~Pd~vi~iD--~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~  151 (383)
                          +.+...+...++|+|+..=  ..|=+-.++..+...  |||.+.   |.        ....+-..|+.++     +
T Consensus        66 ----~~~~~~~~~~~~D~vf~~~hG~~gEdg~~q~~le~~--gipy~G---s~--------~~~~~l~~DK~~~-----k  123 (322)
T 2fb9_A           66 ----HPFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELL--GKPYVG---AG--------VAASALCMDKDLS-----K  123 (322)
T ss_dssp             ----BCSSCCCCCTTCSEEEEECCSTTTTSSHHHHHHHHH--TCCBSS---CC--------HHHHHHHHCHHHH-----H
T ss_pred             ----HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHC--CCCEEC---CC--------HHHHHHHCCHHHH-----H
T ss_conf             ----131566763389899999878754488999999983--998514---88--------7788774399999-----9


Q ss_pred             HHHHCCCCCCE
Q ss_conf             23200255314
Q gi|254780767|r  152 EVMQRLGGPPT  162 (383)
Q Consensus       152 ~~f~k~~~~~~  162 (383)
                      .++++ .|+++
T Consensus       124 ~~l~~-~gIpt  133 (322)
T 2fb9_A          124 RVLAQ-AGVPV  133 (322)
T ss_dssp             HHHHH-TTCCC
T ss_pred             HHHHH-CCCCC
T ss_conf             99998-39985


No 120
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=70.08  E-value=3.2  Score=19.95  Aligned_cols=82  Identities=12%  Similarity=0.242  Sum_probs=46.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+.-||+|+--++.   ....+.+.|++.   ++++.......                     |.              
T Consensus         1 m~~~rILIVDD~~~---~~~~l~~~L~~~---G~~v~~a~~g~---------------------ea--------------   39 (138)
T 3c3m_A            1 MSLYTILVVDDSPM---IVDVFVTMLERG---GYRPITAFSGE---------------------EC--------------   39 (138)
T ss_dssp             -CCCEEEEECSCHH---HHHHHHHHHHHT---TCEEEEESSHH---------------------HH--------------
T ss_pred             CCCCEEEEEECCHH---HHHHHHHHHHHC---CCEEEEECCHH---------------------HH--------------
T ss_conf             99898999979999---999999999987---99999989999---------------------99--------------


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEECC
Q ss_conf             86100128886898-5117765-79999866301--34631111002
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYVCP  123 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv~P  123 (383)
                      .+.+.+++||++++ +.-||.+ +.+++.+|+..  .++|+|-..+.
T Consensus        40 l~~l~~~~pdliilD~~mP~~dG~el~~~ir~~~~~~~ipvI~ls~~   86 (138)
T 3c3m_A           40 LEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK   86 (138)
T ss_dssp             HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred             HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECC
T ss_conf             99975389989997067899988999999984865589987998637


No 121
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structure initiative, PSI-2; 2.00A {Colwellia psychrerythraea 34H}
Probab=70.04  E-value=3.3  Score=19.91  Aligned_cols=37  Identities=19%  Similarity=0.442  Sum_probs=25.7

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEE
Q ss_conf             00128886898-5117765-7999986630--134631111
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINY  120 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~y  120 (383)
                      +.+.+||+||+ +.-||.| +.+++.+|+.  ...+|+|-.
T Consensus        50 ~~~~~pDlillD~~mP~~dG~el~~~ir~~~~~~~ipvI~l   90 (143)
T 3cnb_A           50 LHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAM   90 (143)
T ss_dssp             HHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEE
T ss_pred             HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             97279999998088899986999999984788899849999


No 122
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=70.03  E-value=3.5  Score=19.69  Aligned_cols=43  Identities=16%  Similarity=0.415  Sum_probs=26.7

Q ss_pred             HHHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEEC
Q ss_conf             986100128886898-5117765-79999866301--3463111100
Q gi|254780767|r   80 TVELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYVC  122 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv~  122 (383)
                      ..+.+...+||+||+ +.-||.+ +.+++.+|+..  ..+|+|..-+
T Consensus        43 al~~l~~~~~DlillD~~mP~~dG~el~~~ir~~~~~~~iPiI~lTa   89 (154)
T 3gt7_A           43 AVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI   89 (154)
T ss_dssp             HHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf             99999838999999808999998879999998584557995999982


No 123
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HUPR1; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=69.53  E-value=2.3  Score=20.98  Aligned_cols=21  Identities=10%  Similarity=0.137  Sum_probs=12.1

Q ss_pred             HHCCCCCHHHHHHHHHHHHCC
Q ss_conf             420548989999999998449
Q gi|254780767|r  326 YFNSMIRSEALVRWIERLSQD  346 (383)
Q Consensus       326 liQ~~~~~~~i~~~~~~ll~d  346 (383)
                      |+.+-++++.+...+...+..
T Consensus        99 yl~KP~~~~~L~~~v~~~~~~  119 (139)
T 2jk1_A           99 FLTKPWHPEQLLSSARNAARM  119 (139)
T ss_dssp             EEESSCCHHHHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHHH
T ss_conf             898999999999999999999


No 124
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=69.50  E-value=5.3  Score=18.53  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=24.9

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             8745999976821478999999999973899839999717
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG   41 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG   41 (383)
                      ..|||+|..|-   -..|+.|++.|.++   +.+++++.-
T Consensus        11 ~~MKILVtGat---GfIG~~l~~~Ll~~---g~~V~~~~r   44 (321)
T 2pk3_A           11 GSMRALITGVA---GFVGKYLANHLTEQ---NVEVFGTSR   44 (321)
T ss_dssp             --CEEEEETTT---SHHHHHHHHHHHHT---TCEEEEEES
T ss_pred             CCCEEEEECCC---CHHHHHHHHHHHHC---CCEEEEEEC
T ss_conf             96679996788---88999999999988---498999808


No 125
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=69.33  E-value=5.3  Score=18.51  Aligned_cols=120  Identities=17%  Similarity=0.263  Sum_probs=62.9

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCC-EEEEEE-------CCHHHHHCCCEEE---------EC-H--------HHCC
Q ss_conf             9999768214789999999999738998-399997-------1789994788065---------04-4--------4531
Q gi|254780767|r    6 IAVIAGEISGDLLAGDLIKSLKEMVSYP-INLVGV-------GGPSLQKEGLVSL---------FD-F--------SELS   59 (383)
Q Consensus         6 i~i~aGE~SGD~~~a~li~~Lk~~~~~~-~~~~gi-------GG~~m~~~G~~~~---------~~-~--------~~l~   59 (383)
                      -|+.+|-++=|..-. ++++|.+.  -| +| .|+       -||--|++....+         ++ .        ..+-
T Consensus         9 ~y~~~G~P~~~~~~~-~l~~l~~g--~d~iE-iGiPfsDP~aDGpvIq~a~~~Al~~G~~~~~~~~~~~~~r~~~~~p~v   84 (248)
T 1geq_A            9 PYLTAGDPDKQSTLN-FLLALDEY--AGAIE-LGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIV   84 (248)
T ss_dssp             EEEETTSSCHHHHHH-HHHHHGGG--BSCEE-EECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEE
T ss_pred             EEECCCCCCHHHHHH-HHHHHHCC--CCEEE-ECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf             797171798789999-99998708--99999-788888866658999999999997798799999999999734698789


Q ss_pred             EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf             10136746645999999999986100128886898511776-57999986630134631111002211003663557999
Q gi|254780767|r   60 VIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCA  138 (383)
Q Consensus        60 v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~  138 (383)
                      +|+....+.++     -..+..+.+++..-|.+|.+|-|-- .-.+.+.+++.  |+..+.+|+|+-=   ..|++.+.+
T Consensus        85 lm~Y~N~i~~~-----G~~~f~~~~~~~Gv~g~iipDlp~ee~~~~~~~~~~~--gl~~i~lvsptt~---~~ri~~i~~  154 (248)
T 1geq_A           85 LMTYYNPIYRA-----GVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREE--GIKTVFLAAPNTP---DERLKVIDD  154 (248)
T ss_dssp             EEECHHHHHHH-----CHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHH--TCEEEEEECTTCC---HHHHHHHHH
T ss_pred             EEECCCCCCCC-----CHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC--CCCEEEEECCCCH---HHHHHHHHH
T ss_conf             98066501235-----7999999998679857860578866766676565216--9515898578881---999987763


Q ss_pred             H
Q ss_conf             9
Q gi|254780767|r  139 Y  139 (383)
Q Consensus       139 ~  139 (383)
                      .
T Consensus       155 ~  155 (248)
T 1geq_A          155 M  155 (248)
T ss_dssp             H
T ss_pred             C
T ss_conf             4


No 126
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.15A {Colwellia psychrerythraea 34H}
Probab=68.25  E-value=3.7  Score=19.55  Aligned_cols=37  Identities=16%  Similarity=0.342  Sum_probs=26.1

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             00128886898-5117765-7999986630134631111
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +..++||++++ ++-|+.| +.+++.+|+.....|++-.
T Consensus        42 l~~~~~dlillD~~mP~~dG~el~~~lr~~~~~~~iiil   80 (135)
T 3eqz_A           42 LSLNKQDIIILDLMMPDMDGIEVIRHLAEHKSPASLILI   80 (135)
T ss_dssp             SCCCTTEEEEEECCTTTTHHHHHHHHHHHTTCCCEEEEE
T ss_pred             HHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf             865899999985999999899999999952999979999


No 127
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=67.95  E-value=5.7  Score=18.32  Aligned_cols=36  Identities=19%  Similarity=0.427  Sum_probs=25.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             98745999976821478999999999973899839999717
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG   41 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG   41 (383)
                      ||  |+.+++|-.||  .|..+.+.|-++ +.++-+.+...
T Consensus         1 M~--KvalVTGas~G--IG~aiA~~la~~-Ga~V~~~~~~~   36 (258)
T 3a28_C            1 MS--KVAMVTGGAQG--IGRGISEKLAAD-GFDIAVADLPQ   36 (258)
T ss_dssp             -C--CEEEEETTTSH--HHHHHHHHHHHH-TCEEEEEECGG
T ss_pred             CC--CEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCC
T ss_conf             99--89999078868--999999999987-99899995898


No 128
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=67.71  E-value=3.4  Score=19.77  Aligned_cols=37  Identities=22%  Similarity=0.573  Sum_probs=25.3

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEE
Q ss_conf             0128886898-5117765-79999866301--346311110
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYV  121 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv  121 (383)
                      ++++||+|++ +.-||.| +.+.+.+|+..  .++|++-.-
T Consensus        42 ~~~~pdlillD~~mp~~~G~el~~~ir~~~~~~~iPii~ls   82 (124)
T 1mb3_A           42 RENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVT   82 (124)
T ss_dssp             HHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             83799999978999998479999999828877999689998


No 129
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=67.69  E-value=4  Score=19.36  Aligned_cols=120  Identities=13%  Similarity=0.176  Sum_probs=53.4

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-------CHHHHHCCCEEEEC---H---------------HHCCE
Q ss_conf             99997682147899999999997389983999971-------78999478806504---4---------------45311
Q gi|254780767|r    6 IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG-------GPSLQKEGLVSLFD---F---------------SELSV   60 (383)
Q Consensus         6 i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG-------G~~m~~~G~~~~~~---~---------------~~l~v   60 (383)
                      -|+.||.+|=|.-. +++++|.+.  -|+-=.|+-       ||--|.+....+-+   +               ..+=+
T Consensus        20 ~YltaG~P~~~~~~-~~l~~l~~g--aDiiEiGiPfSDP~aDGpvIq~A~~~AL~~G~~~~~~~~~~~~~r~~~~~p~vl   96 (271)
T 1ujp_A           20 PYLTAGFPSREGFL-QAVEEVLPY--ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFL   96 (271)
T ss_dssp             EEEETTSSCHHHHH-HHHHHHGGG--CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred             EEEECCCCCHHHHH-HHHHHHHCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             89827089878999-999997669--998996899888665569999999888867996688999999986237975599


Q ss_pred             EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf             0136746645999999999986100128886898511776-57999986630134631111002211003663557999
Q gi|254780767|r   61 IGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCA  138 (383)
Q Consensus        61 ~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~  138 (383)
                      ||.+..+.++     -.++..+.+++..-|.+|++|-|-= .-.+...+++.  |+..|.+|+|+-   .+.|++.+.+
T Consensus        97 M~Y~N~~~~~-----G~~~F~~~~~~aGvdG~iipDLP~ee~~~~~~~~~~~--gl~~I~lvaPtt---~~~Ri~~i~~  165 (271)
T 1ujp_A           97 MTYLNPVLAW-----GPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEI--GLETVFLLAPTS---TDARIATVVR  165 (271)
T ss_dssp             ECCHHHHHHH-----CHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHH--TCEEECEECTTC---CHHHHHHHHT
T ss_pred             EEECCHHHHC-----CHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHC--CCCEEEEECCCC---CHHHHHHHHH
T ss_conf             9844424416-----7378889998739842324778522137899999856--986799947888---5789999997


No 130
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=67.52  E-value=4.9  Score=18.77  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=20.2

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEE
Q ss_conf             128886898-5117765-799998663013463111
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~  119 (383)
                      ..+||++++ +.-||.| +.+.+.+|+..+++|++-
T Consensus        48 ~~~~DlvllD~~mP~~~G~e~l~~ir~~~p~~~iiv   83 (154)
T 2qsj_A           48 DNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVAL   83 (154)
T ss_dssp             TCCCSEEEECC------CHHHHHHHHHHCTTSEEEE
T ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             599978998088899888999999998788997999


No 131
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=67.46  E-value=4.1  Score=19.26  Aligned_cols=24  Identities=17%  Similarity=0.117  Sum_probs=11.7

Q ss_pred             EEEEEECCCCCCHHHHCCCHHHHHHHHHHC
Q ss_conf             059985387430123051118999876402
Q gi|254780767|r  194 KILLLPGSRAQEIYKILPFFESAVASLVKR  223 (383)
Q Consensus       194 ~I~llPGSR~~EI~~~lP~~l~~~~~l~~~  223 (383)
                      ++..+-+|..+      |-.+++++.-.++
T Consensus       134 vli~iS~SG~s------~nvi~al~~Ak~~  157 (212)
T 2i2w_A          134 VLLGISTSGNS------ANVIKAIAAAREK  157 (212)
T ss_dssp             EEEEECSSSCC------HHHHHHHHHHHHH
T ss_pred             EEEEEECCCCC------CCHHHHHHHHHHC
T ss_conf             79998089998------3289999999985


No 132
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=67.44  E-value=5.8  Score=18.26  Aligned_cols=55  Identities=7%  Similarity=0.105  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             3674664599999999998610012888689851177657999986630134631111
Q gi|254780767|r   63 IMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        63 ~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +..++.+--.+....+.+.+.+...+||.++++++-||-+--+=..+   .++|+++-
T Consensus        38 i~~il~dP~~~~~v~~~la~~~~~~~~D~Iv~~e~~Gi~la~~lA~~---l~~p~v~~   92 (190)
T 2dy0_A           38 VTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALG---LGVGFVPV   92 (190)
T ss_dssp             THHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHH---HTCEEEEE
T ss_pred             CCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCCCEEEE
T ss_conf             98276699999999999999840689999997353431206899997---59986987


No 133
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding, purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=67.23  E-value=5.9  Score=18.23  Aligned_cols=88  Identities=11%  Similarity=0.127  Sum_probs=47.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC-HHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717-89994788065044453110136746645999999999986
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG-PSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE   82 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG-~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~   82 (383)
                      |||+|+.+.  |=-|  .|..+|++. +.-.+++-+-| +.|...+-...+|.                   .-...+.+
T Consensus         1 mkvliiG~G--grEh--a~~~~l~~~-~~~~~~~~~~~N~g~~~~~~~~~~~~-------------------~d~~~i~~   56 (424)
T 2yw2_A            1 MKVLVVGNG--GREH--AIAWKVAQS-PLVKELYVAKGNAGIWEIAKRVDISP-------------------TDVEKLAE   56 (424)
T ss_dssp             CEEEEEESS--HHHH--HHHHHHTTC-TTCSEEEEEECCTTGGGTSEEECSCT-------------------TCHHHHHH
T ss_pred             CEEEEECCC--HHHH--HHHHHHHHC-CCCCEEEEECCCHHHHHHCCEEEECC-------------------CCHHHHHH
T ss_conf             989998958--9999--999999858-99888999889888985430086288-------------------99999999


Q ss_pred             HCCCCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCE
Q ss_conf             100128886898511776-579999866301346311
Q gi|254780767|r   83 LIVSSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPII  118 (383)
Q Consensus        83 ~i~~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi  118 (383)
                      .+++++||.||. ...+. ..-+|..+++.  |||++
T Consensus        57 ~~~~~~id~vi~-g~e~~l~~~~a~~l~~~--gi~~~   90 (424)
T 2yw2_A           57 FAKNEGVDFTIV-GPEAPLVEGIVDEFEKR--GLKIF   90 (424)
T ss_dssp             HHHHHTCSEEEE-CSHHHHHTTHHHHHHHT--TCCEE
T ss_pred             HHHHHCCCEEEE-CCCHHHHHHHHHHHHHC--CCCCC
T ss_conf             999969999998-98478888899999867--98313


No 134
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=66.63  E-value=6  Score=18.15  Aligned_cols=19  Identities=21%  Similarity=0.326  Sum_probs=13.9

Q ss_pred             HHHHHHHHCCCEEEECCCC
Q ss_conf             6688876275302540577
Q gi|254780767|r  278 VILELALCGIPVVSIYKSE  296 (383)
Q Consensus       278 aTLE~al~g~P~IV~Yk~~  296 (383)
                      |-.||..+|+|.|-+-.++
T Consensus       173 AI~EA~~l~IPvIaivDTn  191 (256)
T 2vqe_B          173 AVREARKLFIPVIALADTD  191 (256)
T ss_dssp             HHHHHHHTTCCCEECCCTT
T ss_pred             HHHHHHHHCCCEEEEECCC
T ss_conf             9999998589557761389


No 135
>3cvj_A Putative phosphoheptose isomerase; NP_244191.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=66.62  E-value=6  Score=18.15  Aligned_cols=101  Identities=12%  Similarity=0.132  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCC----------EEEECHHHCCEEEHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf             7899999999997389983999971789994788----------065044453110136--7466459999999999861
Q gi|254780767|r   16 DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGL----------VSLFDFSELSVIGIM--QVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus        16 D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~----------~~~~~~~~l~v~G~~--evl~~~~~~~~~~~~~~~~   83 (383)
                      +.-++.++.+.-.+ +..+.++|.|+..+-+.-+          ..+.+.......+..  ..+-..+.+   ..+..+.
T Consensus        28 i~~aa~~ia~~i~~-~~rI~i~G~G~S~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~  103 (243)
T 3cvj_A           28 IIKGAHLVSEAVMN-GGRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHERPNKSTYLERIEGL---SKSYLKL  103 (243)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEESGGGHHHHHHTSSSTTCBTTEEECCCGGGSSSSSTTHHHHHTTCTTH---HHHHHHH
T ss_pred             HHHHHHHHHHHHHC-CCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HHHHHHH
T ss_conf             99999999999975-9989999278412779999998478876552235421245524566676645568---9999998


Q ss_pred             CCCCCCCEEEEECHHHHH---HHHHHHHHHHCCCCCCEEEEC
Q ss_conf             001288868985117765---799998663013463111100
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFT---HRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFn---l~lak~lkk~~~~ipvi~yv~  122 (383)
                      ..-.+=|++|.|-+.|=|   +..++.+|++  |+|+|-..+
T Consensus       104 ~~i~~~DvvI~iS~SG~t~~vi~a~~~AK~~--G~~vIaIT~  143 (243)
T 3cvj_A          104 HQVTNKDVIMIISNSGRNTVPVEMAIESRNI--GAKVIAMTS  143 (243)
T ss_dssp             TTCCTTCEEEEECSSCCSHHHHHHHHHHHHH--TCEEEEEEC
T ss_pred             HCCCCCCEEEEECCCCCCHHHHHHHHHHHHC--CCEEEEEEC
T ss_conf             0799999999977899999999999999987--994999808


No 136
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=65.95  E-value=6.2  Score=18.07  Aligned_cols=34  Identities=18%  Similarity=0.285  Sum_probs=21.7

Q ss_pred             CCCCCEEEEECHHHH-HHH--HHHHHHHHCCCCCCEEEEC
Q ss_conf             128886898511776-579--9998663013463111100
Q gi|254780767|r   86 SSKPDVLLIVDNPDF-THR--VAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgF-nl~--lak~lkk~~~~ipvi~yv~  122 (383)
                      ..+|-++++.--||. |+-  ++..-.   -++|++...+
T Consensus        92 tg~pgv~~~TsGpG~~N~~~ai~~A~~---~~~Pll~itg  128 (604)
T 2x7j_A           92 KQRPVLLICTSGTAAANFYPAVVEAHY---SRVPIIVLTA  128 (604)
T ss_dssp             HTSCEEEEECSSHHHHTTHHHHHHHHH---HTCCEEEEEE
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHHHH---HCCCEEEEEC
T ss_conf             599699998515679989999999963---1998599948


No 137
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=65.60  E-value=6.3  Score=18.02  Aligned_cols=92  Identities=16%  Similarity=0.190  Sum_probs=47.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEE-ECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             8745999976821478999999999973899839999-717899947880650444531101367466459999999999
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVG-VGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~g-iGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |.|||+|+-+.  |--|  .|..+|++ .+.--+++- -|-+.+.....-.-.++...                 -...+
T Consensus         2 ~~MkvLviGsG--gREh--Aia~~l~~-s~~~~~v~~~pgN~g~~~~~~~~~~~~~~~-----------------d~~~i   59 (431)
T 3mjf_A            2 NAMNILIIGNG--GREH--ALGWKAAQ-SPLADKIYVAPGNAGTALEPTLENVDIAAT-----------------DIAGL   59 (431)
T ss_dssp             -CEEEEEEECS--HHHH--HHHHHHTT-CTTEEEEEEEECCHHHHHCTTCEECCCCTT-----------------CHHHH
T ss_pred             CCCEEEEECCC--HHHH--HHHHHHHH-CCCCCEEEEECCCHHHHHHCCCEEECCCCC-----------------CHHHH
T ss_conf             97789998978--9999--99999975-989897999689726653066545246866-----------------99999


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898-511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.++++++|+||. =+.| ...-++-.+++.  |+|++
T Consensus        60 ~~~~~~~~idlvivgpe~p-L~~Gl~D~l~~~--gi~vf   95 (431)
T 3mjf_A           60 LAFAQSHDIGLTIVGPEAP-LVIGVVDAFRAA--GLAIF   95 (431)
T ss_dssp             HHHHHHTTEEEEEECSHHH-HHTTHHHHHHHT--TCCEE
T ss_pred             HHHHHHCCCCEEEECCCHH-HHHHHHHHHHHC--CCCEE
T ss_conf             9999982999899897489-887799999747--99333


No 138
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=65.57  E-value=6.3  Score=18.02  Aligned_cols=36  Identities=22%  Similarity=0.347  Sum_probs=23.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+.|||+|.+ .++|--+-..|++.|+++   +.++.-+|
T Consensus         1 m~~MKI~igs-DhaG~~lK~~l~~~L~~~---g~ev~D~G   36 (162)
T 2vvp_A            1 MSGMRVYLGA-DHAGYELKQRIIEHLKQT---GHEPIDCG   36 (162)
T ss_dssp             --CCEEEEEE-CHHHHHHHHHHHHHHHHT---TCEEEECS
T ss_pred             CCCCEEEEEE-CCCHHHHHHHHHHHHHHC---CCEEEECC
T ss_conf             9998999983-880799999999999987---99899679


No 139
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structural genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli O157} SCOP: c.34.1.1
Probab=65.51  E-value=6.3  Score=18.01  Aligned_cols=36  Identities=25%  Similarity=0.259  Sum_probs=27.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             45999976821478999999999973899839999717
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG   41 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG   41 (383)
                      |||.+-.-.+||=.+|.++++.|++..  ++++.-+--
T Consensus         1 MrIvvgITGasga~~a~~ll~~L~~~~--g~eV~vV~T   36 (197)
T 1sbz_A            1 MKLIVGMTGATGAPLGVALLQALREMP--NVETHLVMS   36 (197)
T ss_dssp             CEEEEEECSSSCHHHHHHHHHHHHTCT--TCEEEEEEC
T ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCC--CCEEEEEEC
T ss_conf             989999711899999999999997338--987999998


No 140
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=65.20  E-value=6.4  Score=17.97  Aligned_cols=116  Identities=16%  Similarity=0.132  Sum_probs=58.3

Q ss_pred             CCCCEEEEEECCCCH-------HHHH----------------------HHHHHHHHHHCCCCEEEEEECCHHHHHCCCEE
Q ss_conf             987459999768214-------7899----------------------99999999738998399997178999478806
Q gi|254780767|r    1 MNSLKIAVIAGEISG-------DLLA----------------------GDLIKSLKEMVSYPINLVGVGGPSLQKEGLVS   51 (383)
Q Consensus         1 m~~mki~i~aGE~SG-------D~~~----------------------a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~   51 (383)
                      |.+|||-|+.|..+|       |+.-                      +.+++.+.+..+.++++.+-...+=.=.|.+.
T Consensus         1 m~~~KI~iIGaGs~~~~~~~~~~~~~~~~l~~~ei~L~Did~~rl~~~~~~~~~~~~~~~~~~~i~~ttd~~~al~~adf   80 (480)
T 1obb_A            1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADF   80 (480)
T ss_dssp             -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCE
T ss_conf             99865999998733306999999984757899989998698779999999999999872998289996889998479999


Q ss_pred             EECHH---------------------------HCCEE---EHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-CHHHH
Q ss_conf             50444---------------------------53110---1367466459999999999861001288868985-11776
Q gi|254780767|r   52 LFDFS---------------------------ELSVI---GIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIV-DNPDF  100 (383)
Q Consensus        52 ~~~~~---------------------------~l~v~---G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~i-D~pgF  100 (383)
                      ++..-                           +....   |++..++++    ..+.++.+.+++..||+.++. -.|- 
T Consensus        81 Vi~t~~vgg~~~~~~~~~i~ek~gl~~~~~gqe~~~~G~gg~~~alrti----pv~~~i~~~i~~~~P~A~iin~tNP~-  155 (480)
T 1obb_A           81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQL----KYFVDIARKIEKLSPKAWYLQAANPI-  155 (480)
T ss_dssp             EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHH----HHHHHHHHHHHHHCTTCEEEECSSCH-
T ss_pred             EEEEEECCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHCCCH----HHHHHHHHHHHHHCCCEEEEEECCCH-
T ss_conf             9983432886410355643333061027687525787732666313358----99999999999869984999956816-


Q ss_pred             HHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf             579999866301346311110022
Q gi|254780767|r  101 THRVAKRVRKKMPNLPIINYVCPS  124 (383)
Q Consensus       101 nl~lak~lkk~~~~ipvi~yv~Pq  124 (383)
                       -.+...+++. .++|++= +|-.
T Consensus       156 -~ivt~a~~~~-~~~~~iG-lC~~  176 (480)
T 1obb_A          156 -FEGTTLVTRT-VPIKAVG-FCHG  176 (480)
T ss_dssp             -HHHHHHHHHH-SCSEEEE-ECSG
T ss_pred             -HHHHHHHHHC-CCCEEEE-ECCC
T ss_conf             -9999998643-6652898-5798


No 141
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=64.85  E-value=6.5  Score=17.93  Aligned_cols=80  Identities=23%  Similarity=0.332  Sum_probs=44.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC-H-----------HHHHCCCEEEECHHHCCEEEHHHHHH
Q ss_conf             98745999976821478999999999973899839999717-8-----------99947880650444531101367466
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG-P-----------SLQKEGLVSLFDFSELSVIGIMQVVR   68 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG-~-----------~m~~~G~~~~~~~~~l~v~G~~evl~   68 (383)
                      |++|||.+..-    +-.|....++|.+.   +.++.||-- |           .-++.|+..+ ..+.+..-.      
T Consensus        20 ~~~mkIvf~G~----~~f~~~~l~~L~~~---~~~i~~V~T~pdk~~~~~~v~~~a~~~~ipv~-~~~~~~~~~------   85 (329)
T 2bw0_A           20 FQSMKIAVIGQ----SLFGQEVYCHLRKE---GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVF-KYSRWRAKG------   85 (329)
T ss_dssp             -CCCEEEEECC----HHHHHHHHHHHHHT---TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEE-ECSCCEETT------
T ss_pred             HHCCEEEEECC----CHHHHHHHHHHHHC---CCCEEEEEECCCCCCCCCHHHHHHHHHCCCEE-CCCCCCCCC------
T ss_conf             22308999969----79999999999988---89789999089988898969999998199886-443367612------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH
Q ss_conf             45999999999986100128886898511776
Q gi|254780767|r   69 HLPQFIFRINQTVELIVSSKPDVLLIVDNPDF  100 (383)
Q Consensus        69 ~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgF  100 (383)
                            ....++.+.+++.+||++|.+.|+.+
T Consensus        86 ------~~~~e~~~~l~~~~~Dl~v~~~~~~i  111 (329)
T 2bw0_A           86 ------QALPDVVAKYQALGAELNVLPFCSQF  111 (329)
T ss_dssp             ------EECHHHHHHHHTTCCSEEEESSCSSC
T ss_pred             ------CCCHHHHHHHHHHCCCEEEEECCHHH
T ss_conf             ------04899999999629699999061243


No 142
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630}
Probab=64.34  E-value=5  Score=18.72  Aligned_cols=37  Identities=24%  Similarity=0.397  Sum_probs=23.5

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             00128886898-5117765-79999866301346311110
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      +.+++||++++ +.-||.| +.+.+.+++. ..+|+|...
T Consensus        44 l~~~~~dlillD~~mP~~dG~el~~~~~~~-~~~piI~lt   82 (136)
T 2qzj_A           44 IFSNKYDLIFLEIILSDGDGWTLCKKIRNV-TTCPIVYMT   82 (136)
T ss_dssp             HHHCCCSEEEEESEETTEEHHHHHHHHHTT-CCCCEEEEE
T ss_pred             HHHCCCCEEEECCCCCCCCCHHHHHHHHHC-CCCCEEEEE
T ss_conf             862799999977999899860799999836-999899999


No 143
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=64.26  E-value=4.7  Score=18.86  Aligned_cols=23  Identities=22%  Similarity=0.299  Sum_probs=9.6

Q ss_pred             HHHHH-HHHHHHHHHHCCCCCCEE
Q ss_conf             17765-799998663013463111
Q gi|254780767|r   97 NPDFT-HRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        97 ~pgFn-l~lak~lkk~~~~ipvi~  119 (383)
                      -||.| +.+.+.+|+..+.+|+|-
T Consensus        58 mP~~~G~ell~~ir~~~~~~~vI~   81 (151)
T 3kcn_A           58 MPGMEGTEVIQKARLISPNSVYLM   81 (151)
T ss_dssp             CSSSCHHHHHHHHHHHCSSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf             889870899999998689996899


No 144
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.01  E-value=6.8  Score=17.83  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=28.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++ |..+++|-.||  +|..+.+.|-++ +.+..++..+
T Consensus         1 Ms~-K~ilITGas~G--IG~a~a~~La~~-G~~~~Vi~~~   36 (250)
T 1yo6_A            1 MSP-GSVVVTGANRG--IGLGLVQQLVKD-KNIRHIIATA   36 (250)
T ss_dssp             CCC-SEEEESSCSSH--HHHHHHHHHHTC-TTCCEEEEEE
T ss_pred             CCC-CEEEEECCCCH--HHHHHHHHHHHC-CCCCEEEEEE
T ss_conf             968-99999488879--999999999977-9987899996


No 145
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=63.84  E-value=4.7  Score=18.85  Aligned_cols=36  Identities=11%  Similarity=0.319  Sum_probs=22.9

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             0128886898-5117765-79999866301346311110
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+++||++|+ ++-||.+ +.+.+.+++. .++|++...
T Consensus        44 ~~~~~dlii~D~~lP~~~g~e~~~~~~~~-~~~pii~lt   81 (123)
T 1xhf_A           44 SEYDINLVIMDINLPGKNGLLLARELREQ-ANVALMFLT   81 (123)
T ss_dssp             HHSCCSEEEECSSCSSSCHHHHHHHHHHH-CCCEEEEEE
T ss_pred             HCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCCEEEEE
T ss_conf             70899999996899984499999999856-999789999


No 146
>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=63.77  E-value=4  Score=19.33  Aligned_cols=86  Identities=15%  Similarity=0.152  Sum_probs=50.1

Q ss_pred             CCCE-EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             8745-999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    2 NSLK-IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         2 ~~mk-i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |.|| +.|+..-..-+-+|..+++.|++. +  .+++.|.-..-      .        +.|+- +   |+       .+
T Consensus         2 ~~~K~iaVvGaS~~~~k~g~~v~~~L~~~-G--~~V~pVnP~~~------~--------I~G~~-~---~~-------sl   53 (122)
T 3ff4_A            2 NAMKKTLILGATPETNRYAYLAAERLKSH-G--HEFIPVGRKKG------E--------VLGKT-I---IN-------ER   53 (122)
T ss_dssp             CCCCCEEEETCCSCTTSHHHHHHHHHHHH-T--CCEEEESSSCS------E--------ETTEE-C---BC-------SC
T ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHC-C--CEEEEECCCCC------C--------CCEEE-E---EE-------CC
T ss_conf             97664999966699998299999999978-9--98999888776------1--------00058-9---97-------45


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             8610012888689851177657999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                       +  .-..||+++..--|.....+.+.+.++  |++.+++
T Consensus        54 -~--~p~~iD~v~i~~p~~~~~~~v~e~~~~--g~k~vw~   88 (122)
T 3ff4_A           54 -P--VIEGVDTVTLYINPQNQLSEYNYILSL--KPKRVIF   88 (122)
T ss_dssp             -C--CCTTCCEEEECSCHHHHGGGHHHHHHH--CCSEEEE
T ss_pred             -C--CCCCCCEEEEEECHHHHHHHHHHHHHC--CCCEEEE
T ss_conf             -5--678875799995889989999999853--9999999


No 147
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=63.68  E-value=3  Score=20.19  Aligned_cols=39  Identities=31%  Similarity=0.586  Sum_probs=22.5

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             6100128886898-5117765-7999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+.+||++|+ +.-||.+ +.+.+.+|+..+.+|++..
T Consensus        41 ~~l~~~~~dlii~D~~lp~~~G~el~~~l~~~~~~~pii~~   81 (124)
T 1dc7_A           41 AALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIM   81 (124)
T ss_dssp             HHSSSCCCSCEEECSCSSHHHHCSTHHHHHHHCTTSCCCCB
T ss_pred             HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf             99983899999875889998459999999985899919999


No 148
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=63.17  E-value=5  Score=18.72  Aligned_cols=35  Identities=23%  Similarity=0.403  Sum_probs=19.4

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEE
Q ss_conf             0128886898-5117765-799998663013463111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~  119 (383)
                      ...+||++++ ++-||.+ +.+.+.+++..+..|++-
T Consensus        48 ~~~~pdlvllD~~lp~~~G~~~~~~~~~~~~~~~iiv   84 (215)
T 1a04_A           48 ESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVV   84 (215)
T ss_dssp             HHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEE
T ss_pred             HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             7469968999688899898623210112456655434


No 149
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=63.13  E-value=4.4  Score=19.07  Aligned_cols=33  Identities=15%  Similarity=0.322  Sum_probs=15.1

Q ss_pred             CCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEE
Q ss_conf             28886898-5117765-7999986630--13463111
Q gi|254780767|r   87 SKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIIN  119 (383)
Q Consensus        87 ~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~  119 (383)
                      ++||++|+ ++-||.+ +.+++.+|+.  ...+|+|-
T Consensus        49 ~~~dlvilD~~mP~~dG~~l~~~ir~~~~~~~~pii~   85 (140)
T 3grc_A           49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV   85 (140)
T ss_dssp             SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred             CCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf             8998998536689997899999998472569997899


No 150
>3kht_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.10A {Hahella chejuensis kctc 2396}
Probab=63.06  E-value=6.3  Score=18.01  Aligned_cols=36  Identities=25%  Similarity=0.356  Sum_probs=22.3

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEE
Q ss_conf             0128886898-5117765-79999866301--34631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~y  120 (383)
                      .+.+||++|+ +.-|+.| +.+++.+|+..  .++|+|-.
T Consensus        48 ~~~~~dliilD~~mP~~~G~el~~~ir~~~~~~~iPiI~l   87 (144)
T 3kht_A           48 QQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVIL   87 (144)
T ss_dssp             TTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEE
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             7179999998699999999999999983787899918999


No 151
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, PSI; HET: MSE; 2.00A {Enterococcus faecalis V583}
Probab=62.77  E-value=5.7  Score=18.31  Aligned_cols=48  Identities=25%  Similarity=0.383  Sum_probs=35.3

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCH---HHHHCCCEEEEC
Q ss_conf             87459999768214789999999999738998399997178---999478806504
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGP---SLQKEGLVSLFD   54 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~---~m~~~G~~~~~~   54 (383)
                      |+|||.|+-...=|=.+|+.|.++     +.++.+++-+..   .+++.|+....+
T Consensus         2 ~~MkI~IiGaGaiG~~~a~~La~~-----G~~V~lv~r~~~~~e~i~~~Gl~~~~~   52 (316)
T 2ew2_A            2 NAMKIAIAGAGAMGSRLGIMLHQG-----GNDVTLIDQWPAHIEAIRKNGLIADFN   52 (316)
T ss_dssp             --CEEEEECCSHHHHHHHHHHHHT-----TCEEEEECSCHHHHHHHHHHCEEEEET
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHC-----CCCEEEEECCHHHHHHHHHCCCEEECC
T ss_conf             989899999289999999999968-----997899978899999999789689448


No 152
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 1n4a_A* 1n4d_A
Probab=61.25  E-value=7.6  Score=17.51  Aligned_cols=61  Identities=15%  Similarity=0.228  Sum_probs=38.1

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH
Q ss_conf             861001288868985117765799998663013463111100221100366355799999864015677422
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKE  152 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~  152 (383)
                      .+.+.+.+||+||.-++ ++.-...+++++.  |+|++..- |       .....+.+.+..+--+|--|.+
T Consensus        50 ~E~l~~l~PDlVi~~~~-~~~~~~~~~l~~~--gi~v~~~~-~-------~~~~~~~~~i~~lg~i~g~~~~  110 (245)
T 1n2z_A           50 LERIVALKPDLVIAWRG-GNAERQVDQLASL--GIKVMWVD-A-------TSIEQIANALRQLAPWSPQPDK  110 (245)
T ss_dssp             HHHHHHTCCSEEEECTT-TSCHHHHHHHHHH--TCCEEECC-C-------CSHHHHHHHHHHHGGGCSCHHH
T ss_pred             HHHHHHCCCCEEEEECC-CCCHHHHHHHHHC--CCEEEECC-C-------CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998449986997247-7738899999742--86477359-9-------9999999999999999740067


No 153
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=61.07  E-value=5.5  Score=18.41  Aligned_cols=32  Identities=28%  Similarity=0.569  Sum_probs=21.1

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCC
Q ss_conf             0128886898-5117765-799998663013463
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLP  116 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ip  116 (383)
                      .+++||++++ +.-||.| +.+++.+|+.....|
T Consensus        45 ~~~~pdlvllD~~mP~~dG~el~~~ir~~~~~~~   78 (130)
T 1dz3_A           45 EEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQP   78 (130)
T ss_dssp             HHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCC
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf             8559999998289999988999999985599999


No 154
>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=61.02  E-value=5.7  Score=18.35  Aligned_cols=35  Identities=20%  Similarity=0.576  Sum_probs=18.9

Q ss_pred             CCCCCCEEEEECH--HHHH-HHHHHHHHHHC--CCCCCEEE
Q ss_conf             0128886898511--7765-79999866301--34631111
Q gi|254780767|r   85 VSSKPDVLLIVDN--PDFT-HRVAKRVRKKM--PNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~iD~--pgFn-l~lak~lkk~~--~~ipvi~y  120 (383)
                      .+.+||+|++ |+  ||.| +.+++.+|+..  .++|+|..
T Consensus        42 ~~~~pdlvll-D~~mP~mdG~e~~~~ir~~~~~~~iPVI~l   81 (459)
T 1w25_A           42 ARDLPDIILL-DVMMPGMDGFTVCRKLKDDPTTRHIPVVLI   81 (459)
T ss_dssp             HHHCCSEEEE-ESCCSSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred             HCCCCCEEEE-ECCCCCCCHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             6279999999-798999999999999970867798968999


No 155
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=61.02  E-value=7.6  Score=17.48  Aligned_cols=79  Identities=22%  Similarity=0.285  Sum_probs=42.4

Q ss_pred             CCEEEEEE-------CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             74599997-------68214789999999999738998399997178999478806504445311013674664599999
Q gi|254780767|r    3 SLKIAVIA-------GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         3 ~mki~i~a-------GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      +.||+++-       |-..+.-+...+.+.|... ..++.+.|.+.     .|.....+....++-|..  .   +   .
T Consensus         5 ~vrIl~iGDSiT~G~g~~~~~~y~~~l~~~l~~~-~~~v~~~~~~~-----~g~~~~~~~~n~g~~G~~--~---~---~   70 (215)
T 2vpt_A            5 TIKIMPVGDSCTEGMGGGEMGSYRTELYRLLTQA-GLSIDFVGSQR-----SGPSSLPDKDHEGHSGWT--I---P---Q   70 (215)
T ss_dssp             EEEEEEEESHHHHTCSSSTTCTTHHHHHHHHHHT-TCEEEECCSEE-----CCCTTCSCCEEEECTTCC--H---H---H
T ss_pred             CEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCEEEEECCC-----CCCCCCCCCCCCCCCCCC--H---H---H
T ss_conf             7189998605613848999996699999999855-99569983134-----677545565535527776--8---9---9


Q ss_pred             HHHHHHHHCCCCCCCEEEEE
Q ss_conf             99999861001288868985
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIV   95 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~i   95 (383)
                      ....+.+.+...+||+|++.
T Consensus        71 ~~~~~~~~~~~~~pd~vvi~   90 (215)
T 2vpt_A           71 IASNINNWLNTHNPDVVFLW   90 (215)
T ss_dssp             HHHHHHHHHHHHCCSEEEEE
T ss_pred             HHHHHHHHHHHCCCCEEEEE
T ss_conf             99999999865699889997


No 156
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=60.82  E-value=3.4  Score=19.82  Aligned_cols=90  Identities=12%  Similarity=0.115  Sum_probs=54.9

Q ss_pred             CCCCEEEEEECCCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             987459999768214-7899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~aGE~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |+.+||-|+.....| +.|    +.++++  .+++++.|+..+.-+.+  +..++  +..+                +..
T Consensus         3 ~~~lrvgiiG~G~~g~~~h----~~~~~~--~~~~~ivav~d~~~~~a--~~~~~--~~~~----------------~~~   56 (362)
T 3fhl_A            3 LEIIKTGLAAFGMSGQVFH----APFIST--NPHFELYKIVERSKELS--KERYP--QASI----------------VRS   56 (362)
T ss_dssp             CCCEEEEESCCSHHHHHTT----HHHHHH--CTTEEEEEEECSSCCGG--GTTCT--TSEE----------------ESC
T ss_pred             CCCEEEEEECCCHHHHHHH----HHHHHH--CCCCEEEEEECCCHHHH--HHHCC--CCCC----------------CCC
T ss_conf             6675999993689999999----999983--98929999984999999--97678--9984----------------399


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+....+|+|+..-.|.+++.+++.+=+.  |++|+
T Consensus        57 ~~ell~~~~iDaV~I~tp~~~H~~~~~~al~a--GkhV~   93 (362)
T 3fhl_A           57 FKELTEDPEIDLIVVNTPDNTHYEYAGMALEA--GKNVV   93 (362)
T ss_dssp             SHHHHTCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHHHHCCCCCCEEEECCCCHHHHHHHHHHHHC--CCCCH
T ss_conf             99996499998899948947889999999974--99751


No 157
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; 15025322, structural genomics, JCSG, protein structure initiative, PSI; HET: NAI UNL; 2.05A {Clostridium acetobutylicum atcc 824} SCOP: c.2.1.2
Probab=60.82  E-value=7.7  Score=17.46  Aligned_cols=33  Identities=18%  Similarity=0.315  Sum_probs=23.8

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             874599997682147899999999997389983999971
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      -+|||+|..| .  =..|+.|++.|.++   +.++.++.
T Consensus        11 ~~MKILItGa-t--GfIG~~lv~~L~~~---g~~V~~~~   43 (292)
T 1vl0_A           11 HHMKILITGA-N--GQLGREIQKQLKGK---NVEVIPTD   43 (292)
T ss_dssp             -CEEEEEEST-T--SHHHHHHHHHHTTS---SEEEEEEC
T ss_pred             CCCEEEEECC-C--CHHHHHHHHHHHHC---CCEEEEEE
T ss_conf             9875899899-9--88999999999868---79899932


No 158
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=60.73  E-value=5  Score=18.72  Aligned_cols=34  Identities=24%  Similarity=0.424  Sum_probs=15.8

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEE
Q ss_conf             128886898-5117765-79999866301--3463111
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIIN  119 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~  119 (383)
                      +.+||++|+ +.-||.| +.+++.+|+..  .++|+|-
T Consensus        45 ~~~pdliilD~~mP~~dG~el~~~ir~~~~~~~iPiI~   82 (133)
T 3nhm_A           45 AHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIF   82 (133)
T ss_dssp             HSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEE
T ss_pred             HCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf             47999999759999999999999998288889987899


No 159
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A
Probab=60.53  E-value=7.8  Score=17.43  Aligned_cols=78  Identities=28%  Similarity=0.416  Sum_probs=44.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++ ||+|+--+++   ....+.+.|+. .  ++++.......                                   +.
T Consensus         1 M~k-rILiVDDd~~---~~~~l~~~L~~-~--g~~v~~a~~~~-----------------------------------~a   38 (120)
T 3f6p_A            1 MDK-KILVVDDEKP---IADILEFNLRK-E--GYEVHCAHDGN-----------------------------------EA   38 (120)
T ss_dssp             CCC-EEEEECSCHH---HHHHHHHHHHH-T--TCEEEEESSHH-----------------------------------HH
T ss_pred             CCC-CEEEEECCHH---HHHHHHHHHHH-C--CCEEEEECCHH-----------------------------------HH
T ss_conf             997-1999939999---99999999998-8--99999989999-----------------------------------99


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             86100128886898-5117765-79999866301346311110
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+.+.+++||++|+ +.-||.| +.+.+.+|+. .++|++...
T Consensus        39 l~~l~~~~~dlii~D~~mP~~~G~e~~~~~r~~-~~~~ii~lt   80 (120)
T 3f6p_A           39 VEMVEELQPDLILLDIMLPNKDGVEVCREVRKK-YDMPIIMLT   80 (120)
T ss_dssp             HHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTT-CCSCEEEEE
T ss_pred             HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHC-CCCCEEEEE
T ss_conf             999971899999982999999999999999816-899589997


No 160
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=59.72  E-value=7.4  Score=17.57  Aligned_cols=91  Identities=13%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+ +||-|+....-|..+   ...++++ .+ ++++.|+..+.-+.+  +.+  .+++++       +       .+...
T Consensus         1 Mk-lrvgiIG~G~~g~~~---~~~~l~~-~~-~~~l~av~d~~~~~~--~~~--~~~~~~-------~-------~~~~~   56 (387)
T 3moi_A            1 MK-IRFGICGLGFAGSVL---MAPAMRH-HP-DAQIVAACDPNEDVR--ERF--GKEYGI-------P-------VFATL   56 (387)
T ss_dssp             CC-EEEEEECCSHHHHTT---HHHHHHH-CT-TEEEEEEECSCHHHH--HHH--HHHHTC-------C-------EESSH
T ss_pred             CC-CEEEEECCCHHHHHH---HHHHHHH-CC-CEEEEEEECCCHHHH--HHH--HHHHCC-------C-------EECCH
T ss_conf             96-169999896999999---9999973-97-919999987999999--999--998599-------8-------58999


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             8610012888689851177657999986630134631
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPI  117 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipv  117 (383)
                      .+.+.+.++|+|+..--|..+..+++++=+.  |+.|
T Consensus        57 ~ell~~~~vD~V~i~tp~~~H~~~~~~al~~--gkhV   91 (387)
T 3moi_A           57 AEMMQHVQMDAVYIASPHQFHCEHVVQASEQ--GLHI   91 (387)
T ss_dssp             HHHHHHSCCSEEEECSCGGGHHHHHHHHHHT--TCEE
T ss_pred             HHHHCCCCCCEEEECCCCHHHHHHHHHHHHH--CCCE
T ss_conf             9996599998899908967899999999861--8956


No 161
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} PDB: 3dgf_C 3dge_C
Probab=59.69  E-value=7.4  Score=17.57  Aligned_cols=40  Identities=23%  Similarity=0.459  Sum_probs=24.8

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEE
Q ss_conf             6100128886898-5117765-79999866301--346311110
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYV  121 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv  121 (383)
                      +.+.+++||++|+ +--|+.| +.+++.+|+..  .++|+|-.-
T Consensus        40 ~~~~~~~pdliilD~~mP~~~G~el~~~ir~~~~~~~iPiI~lT   83 (122)
T 3gl9_A           40 EKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLT   83 (122)
T ss_dssp             HHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEE
T ss_pred             HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             99983799999851028999889999999838878999899982


No 162
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1
Probab=59.38  E-value=7.2  Score=17.65  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=47.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+ |||+++--|+   .....|...|.+.   ++++.......                                   +.
T Consensus         1 M~-~rILiVeDd~---~~~~~l~~~L~~~---g~~V~~a~~~~-----------------------------------ea   38 (225)
T 1kgs_A            1 MN-VRVLVVEDER---DLADLITEALKKE---MFTVDVCYDGE-----------------------------------EG   38 (225)
T ss_dssp             -C-CEEEEECSSH---HHHHHHHHHHHHT---TCEEEEESSHH-----------------------------------HH
T ss_pred             CC-CEEEEEECCH---HHHHHHHHHHHHC---CCEEEEECCHH-----------------------------------HH
T ss_conf             99-6199992999---9999999999987---99999989999-----------------------------------99


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEECC
Q ss_conf             86100128886898-5117765-7999986630134631111002
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYVCP  123 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv~P  123 (383)
                      .+.+.+++||++|+ +.-|+.+ +.+.+.+|+....+|++...+.
T Consensus        39 ~~~~~~~~~dliilD~~lp~~~g~~~~~~ir~~~~~~pii~ls~~   83 (225)
T 1kgs_A           39 MYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTAL   83 (225)
T ss_dssp             HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESS
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECCCC
T ss_conf             999972899899994677654310101221113456753202334


No 163
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, dimer; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 1zy2_A*
Probab=59.16  E-value=5.7  Score=18.34  Aligned_cols=38  Identities=21%  Similarity=0.405  Sum_probs=19.8

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             100128886898-5117765-7999986630134631111
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+...+||+|++ +--||-| +.+.+.+|+..+.+|+|..
T Consensus        39 ~l~~~~~DlVllDl~mP~~dGlell~~lr~~~p~~pVIvl   78 (387)
T 1ny5_A           39 LLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVI   78 (387)
T ss_dssp             HHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf             9861899889995999999999999999844999828995


No 164
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate binding protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2phz_A
Probab=59.07  E-value=7.1  Score=17.70  Aligned_cols=36  Identities=25%  Similarity=0.427  Sum_probs=25.1

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             8610012888689851177657999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      .+.|..-+||+||.-  .+++-.+..++++.  +++++..
T Consensus        89 ~E~I~al~PDlVi~~--~~~~~~~~~~l~~~--g~~v~~~  124 (311)
T 2wi8_A           89 IEKILEMKPDVILAS--TKFPEKTLQKISTA--GTTIPVS  124 (311)
T ss_dssp             HHHHHHHCCSEEEEE--TTSCHHHHHHHHTT--SCEEEEC
T ss_pred             HHHHHHCCCCEEECC--CCCCHHHHHHHHHH--CCCEEEC
T ss_conf             999974199666546--75558899999850--9823313


No 165
>3cg4_A Response regulator receiver domain protein (CHEY- like); structural genomics, unknown function, uncharacterized protein; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=58.92  E-value=5.5  Score=18.43  Aligned_cols=20  Identities=15%  Similarity=0.195  Sum_probs=10.2

Q ss_pred             HHCCCCCHHHHHHHHHHHHC
Q ss_conf             42054898999999999844
Q gi|254780767|r  326 YFNSMIRSEALVRWIERLSQ  345 (383)
Q Consensus       326 liQ~~~~~~~i~~~~~~ll~  345 (383)
                      |+..-++++.+...+..++.
T Consensus       107 yl~KP~~~~~Ll~~v~~~l~  126 (142)
T 3cg4_A          107 YITKPFDNEDLIEKTTFFMG  126 (142)
T ss_dssp             EEESSCCHHHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHH
T ss_conf             99898999999999999999


No 166
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=58.66  E-value=8.4  Score=17.22  Aligned_cols=44  Identities=16%  Similarity=0.263  Sum_probs=34.1

Q ss_pred             CCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
Q ss_conf             874599997-682147899999999997389983999971789994
Q gi|254780767|r    2 NSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQK   46 (383)
Q Consensus         2 ~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~   46 (383)
                      .+|||+++| |..|..+.+.++-++.+++ +.++++..++-.+.++
T Consensus         3 ~~mkIlL~C~~G~STsllv~km~~~a~~~-~~~~~I~A~~~~~~~~   47 (109)
T 2l2q_A            3 GSMNILLVCGAGMSTSMLVQRIEKYAKSK-NINATIEAIAETRLSE   47 (109)
T ss_dssp             CCEEEEEESSSSCSSCHHHHHHHHHHHHH-TCSEEEEEECSTTHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEEEHHHHHH
T ss_conf             75289888789757999999999999986-9977999976899986


No 167
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=58.18  E-value=6.5  Score=17.94  Aligned_cols=36  Identities=28%  Similarity=0.598  Sum_probs=21.5

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             0128886898-5117765-79999866301346311110
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+++||++|+ +.-||.+ +.+.+..++. ..+|++...
T Consensus        42 ~~~~~dliilD~~mp~~dG~~~l~~~~~~-~~~pvi~lt   79 (120)
T 2a9o_A           42 EAEQPDIIILDLMLPEIDGLEVAKTIRKT-SSVPILMLS   79 (120)
T ss_dssp             HHHCCSEEEECSSCSSSCHHHHHHHHHHH-CCCCEEEEE
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHC-CCCCEEEEE
T ss_conf             85799899982999998999999998865-998199997


No 168
>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=57.71  E-value=6.7  Score=17.84  Aligned_cols=39  Identities=31%  Similarity=0.429  Sum_probs=21.3

Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             86100128886898-5117765-7999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+.+++||++++ |-=||.| +.+.+.+|+. ..+|++-.
T Consensus        51 l~~~~~~~pDlillDi~MP~mdGle~~~~ir~~-~~~piiil   91 (205)
T 1s8n_A           51 VELAELHKPDLVIMDVKMPRRDGIDAASEIASK-RIAPIVVL   91 (205)
T ss_dssp             HHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHT-TCSCEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHC-CCCCEEEE
T ss_conf             999983799999996404586079999999856-99998999


No 169
>3cg0_A Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; signal receiver domain; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=57.54  E-value=6.7  Score=17.84  Aligned_cols=32  Identities=31%  Similarity=0.326  Sum_probs=12.5

Q ss_pred             CCCCEEEEE-CHH-HHH-HHHHHHHHHHCCCCCCEE
Q ss_conf             288868985-117-765-799998663013463111
Q gi|254780767|r   87 SKPDVLLIV-DNP-DFT-HRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        87 ~~Pd~vi~i-D~p-gFn-l~lak~lkk~~~~ipvi~  119 (383)
                      ++||++|+- .-| +++ +.+++.+|+ .+++|+|.
T Consensus        53 ~~~dlvi~D~~mp~~~dG~~l~~~lr~-~~~~piI~   87 (140)
T 3cg0_A           53 LRPDIALVDIMLCGALDGVETAARLAA-GCNLPIIF   87 (140)
T ss_dssp             HCCSEEEEESSCCSSSCHHHHHHHHHH-HSCCCEEE
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHH-CCCCCEEE
T ss_conf             799889997678767989999999985-79996899


No 170
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=56.91  E-value=4.3  Score=19.10  Aligned_cols=79  Identities=13%  Similarity=0.075  Sum_probs=41.8

Q ss_pred             CEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH--------HHHCCCEEE-ECHHHCCEEEHHHHHHHHHHH
Q ss_conf             4599997-682147899999999997389983999971789--------994788065-044453110136746645999
Q gi|254780767|r    4 LKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPS--------LQKEGLVSL-FDFSELSVIGIMQVVRHLPQF   73 (383)
Q Consensus         4 mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~--------m~~~G~~~~-~~~~~l~v~G~~evl~~~~~~   73 (383)
                      |||.|.+ |.  |-. ...|++++++. ..++++.+|-.++        ....+.... .+...           ... -
T Consensus         2 mkiavl~SG~--Gsn-l~ali~~~~~~-~~~~~I~~Vitn~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~-~   65 (216)
T 2ywr_A            2 LKIGVLVSGR--GSN-LQAIIDAIESG-KVNASIELVISDNPKAYAIERCKKHNVECKVIQRKE-----------FPS-K   65 (216)
T ss_dssp             EEEEEEECSC--CHH-HHHHHHHHHTT-SSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGG-----------SSS-H
T ss_pred             CEEEEEEECC--CHH-HHHHHHHHHCC-CCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCC-----------CCC-H
T ss_conf             6899999179--567-99999998739-999889999980885077766451486303542145-----------687-6


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECHH
Q ss_conf             9999999861001288868985117
Q gi|254780767|r   74 IFRINQTVELIVSSKPDVLLIVDNP   98 (383)
Q Consensus        74 ~~~~~~~~~~i~~~~Pd~vi~iD~p   98 (383)
                      ...-.+..+.+.+.+||++|++-|+
T Consensus        66 ~~~~~~~~~~l~~~~~Dliv~~g~~   90 (216)
T 2ywr_A           66 KEFEERMALELKKKGVELVVLAGFM   90 (216)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             6779999999987099999994712


No 171
>3etn_A Putative phosphosugar isomerase involved in capsule formation; YP_209877.1, structural genomics; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=56.56  E-value=9.1  Score=16.99  Aligned_cols=134  Identities=14%  Similarity=0.151  Sum_probs=57.9

Q ss_pred             EECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCCC
Q ss_conf             504445311013674664599999999998610012888689851177657999986630-1346311110022110036
Q gi|254780767|r   52 LFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKK-MPNLPIINYVCPSVWAWRE  130 (383)
Q Consensus        52 ~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~-~~~ipvi~yv~PqvWAWr~  130 (383)
                      ..+.+.+.+.++.|.+++...  +..+.+.+..           +.-+|+--+..-+++. ..+.+|+.|        +-
T Consensus         9 ~~~~e~~~~q~i~~~i~~~l~--~~~~a~~~~~-----------~~~~~e~~v~~i~~~i~~~~grI~~~--------Gv   67 (220)
T 3etn_A            9 HHHHENLYFQGMIESIQELLQ--KEAQAVLNIP-----------VTDAYEKAVELIVEQIHRKKGKLVTS--------GM   67 (220)
T ss_dssp             ----------CHHHHHHHHHH--HHHHHHHTCC-----------CCTHHHHHHHHHHHHTTTTCCCEEEE--------CS
T ss_pred             CCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHCCCEEEEE--------EE
T ss_conf             221011579999999999999--9999998543-----------13579999999999997179969999--------70


Q ss_pred             CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHC
Q ss_conf             63557999998640156774223200255314763882112210013558889761876556505998538743012305
Q gi|254780767|r  131 GRARKMCAYINQVISILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKIL  210 (383)
Q Consensus       131 ~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~l  210 (383)
                      |+--.++++.-.-         |. +. |+++.|+.-+-.-...          ...+.+++ .+.++-.|-.+      
T Consensus        68 G~S~~vA~~~~~k---------l~-~l-G~~~~~~~d~~~~~~~----------~~~~~~~D-vlI~iS~SG~T------  119 (220)
T 3etn_A           68 GKAGQIAMNIATT---------FC-ST-GIPSVFLHPSEAQHGD----------LGILQEND-LLLLISNSGKT------  119 (220)
T ss_dssp             HHHHHHHHHHHHH---------HH-HT-TCCEEECCTTGGGBTG----------GGGCCTTC-EEEEECSSSCC------
T ss_pred             CHHHHHHHHHHHH---------HH-HC-CCCCEECCCHHHHHHH----------HHCCCCCC-EEEEECCCCCC------
T ss_conf             4799999999999---------99-83-9940527817788888----------51588888-89998289986------


Q ss_pred             CCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             111899987640273512620166
Q gi|254780767|r  211 PFFESAVASLVKRNPFFRFSLVTV  234 (383)
Q Consensus       211 P~~l~~~~~l~~~~~~~~~~i~~~  234 (383)
                      +-.+++++...+...+...+..+.
T Consensus       120 ~evi~~~~~ak~~~~~~~vI~IT~  143 (220)
T 3etn_A          120 REIVELTQLAHNLNPGLKFIVITG  143 (220)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             658888999874046871588860


No 172
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15}
Probab=56.44  E-value=9.1  Score=16.98  Aligned_cols=47  Identities=19%  Similarity=0.230  Sum_probs=32.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHCCCEEEE
Q ss_conf             9874599997682147899999999997389983999971-7899947880650
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG-GPSLQKEGLVSLF   53 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG-G~~m~~~G~~~~~   53 (383)
                      |+ |||.|+.+.+=|=.+|+.|.++     +.++.++.=+ -+.+++.|+...-
T Consensus         1 m~-MkI~ViGaGaiG~~~a~~L~~a-----G~~Vtlv~R~~~~ai~~~Gl~l~~   48 (312)
T 3hn2_A            1 MS-LRIAIVGAGALGLYYGALLQRS-----GEDVHFLLRRDYEAIAGNGLKVFS   48 (312)
T ss_dssp             ----CEEEECCSTTHHHHHHHHHHT-----SCCEEEECSTTHHHHHHTCEEEEE
T ss_pred             CC-CEEEEECCCHHHHHHHHHHHHC-----CCCEEEEECCHHHHHHHCCEEEEE
T ss_conf             98-8899999289999999999836-----995699968659999978949992


No 173
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=56.33  E-value=8.8  Score=17.07  Aligned_cols=39  Identities=21%  Similarity=0.142  Sum_probs=20.3

Q ss_pred             EEEEEE------CCCCHHHHHHHHHH----HHHHHCCCCEEEEEECCHHH
Q ss_conf             599997------68214789999999----99973899839999717899
Q gi|254780767|r    5 KIAVIA------GEISGDLLAGDLIK----SLKEMVSYPINLVGVGGPSL   44 (383)
Q Consensus         5 ki~i~a------GE~SGD~~~a~li~----~Lk~~~~~~~~~~giGG~~m   44 (383)
                      ++.|+|      |.+-|-.++..+.+    +++.+.| =+-+.-=||.+|
T Consensus       106 ~vvVianD~T~~gGS~G~~~~~ki~~a~elA~~~glP-~I~l~~sgGARi  154 (758)
T 3k8x_A          106 QFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIP-RIYLAANSGARI  154 (758)
T ss_dssp             EEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCC-EEEEECCCCBCC
T ss_pred             EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCC
T ss_conf             8999988476206578889999999999999983999-899965888686


No 174
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, PSI-2, protein structure initiative; 2.00A {Desulfuromonas acetoxidans dsm 684}
Probab=56.24  E-value=7.5  Score=17.53  Aligned_cols=35  Identities=14%  Similarity=0.501  Sum_probs=20.2

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEE
Q ss_conf             128886898-5117765-7999986630--134631111
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINY  120 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~y  120 (383)
                      +.+||++|+ +.-||.+ +.+.+.+|+.  ..++|+|-.
T Consensus        50 ~~~pdliilD~~mP~~dG~el~~~ir~~~~~~~iPiI~l   88 (147)
T 2zay_A           50 KTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIAL   88 (147)
T ss_dssp             HHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEE
T ss_pred             HCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf             379999998599999975189999984855689718997


No 175
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032}
Probab=55.69  E-value=9.3  Score=16.90  Aligned_cols=90  Identities=16%  Similarity=0.232  Sum_probs=53.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74599997682147899999999997389983999971789994788065044453110136746645999999999986
Q gi|254780767|r    3 SLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE   82 (383)
Q Consensus         3 ~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~   82 (383)
                      +|||.|+....=|.    ..++++++.  +++++.|+..+.-+.+.  .+  -+++   |+    +.       +....+
T Consensus         4 ~irvgiIG~G~~g~----~h~~~~~~~--~~~~l~av~d~~~~~~~--~~--~~~~---~~----~~-------~~~~~e   59 (344)
T 3euw_A            4 TLRIALFGAGRIGH----VHAANIAAN--PDLELVVIADPFIEGAQ--RL--AEAN---GA----EA-------VASPDE   59 (344)
T ss_dssp             CEEEEEECCSHHHH----HHHHHHHHC--TTEEEEEEECSSHHHHH--HH--HHTT---TC----EE-------ESSHHH
T ss_pred             CEEEEEECCHHHHH----HHHHHHHHC--CCCEEEEEECCCHHHHH--HH--HHHH---CC----CE-------ECCHHH
T ss_conf             67798999729999----999999718--99489999889999999--99--9984---99----77-------899999


Q ss_pred             HCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             100128886898511776579999866301346311
Q gi|254780767|r   83 LIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        83 ~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+..||+|+..-.|.++..+++.+=+.  |++|+
T Consensus        60 ll~~~~iD~V~I~tp~~~h~~~~~~al~~--gk~Vl   93 (344)
T 3euw_A           60 VFARDDIDGIVIGSPTSTHVDLITRAVER--GIPAL   93 (344)
T ss_dssp             HTTCSCCCEEEECSCGGGHHHHHHHHHHT--TCCEE
T ss_pred             HHCCCCCCEEEECCCCCCHHHHHHHHHHH--CCCEE
T ss_conf             96489988899715431103567998851--37511


No 176
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=55.63  E-value=4.2  Score=19.19  Aligned_cols=97  Identities=12%  Similarity=0.012  Sum_probs=45.2

Q ss_pred             EEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             599997-6821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    5 KIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         5 ki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      ||.|.+ |.=|  . ...|+++.++. ..++++.+|-.++-...|.+.   .....+.-.....+....-...-.++.+.
T Consensus         2 ki~vl~SG~GS--n-l~aLl~~~~~~-~~~~eI~~Vitn~~~~~~~~~---a~~~~~~~~~~~~~~~~~~~~~~~~l~~~   74 (209)
T 1meo_A            2 RVAVLISGTGS--N-LQALIDSTREP-NSSAQIDIVISNKAAVAGLDK---AERAGIPTRVINHKLYKNRVEFDSAIDLV   74 (209)
T ss_dssp             EEEEEESSSCT--T-HHHHHHHHHST-TCSCEEEEEEESSTTCHHHHH---HHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred             EEEEEEECCCH--H-HHHHHHHHHCC-CCCCEEEEEEECCCCHHHHHH---HHHCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             89999837846--5-99999987669-999789999988976777778---88629624554045668988889999999


Q ss_pred             CCCCCCCEEEEECHHHH-HHHHHHHH
Q ss_conf             00128886898511776-57999986
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDF-THRVAKRV  108 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgF-nl~lak~l  108 (383)
                      +.+.+||+++++-|+-. +-.+-...
T Consensus        75 l~~~~~Dliv~~g~~~ii~~~il~~~  100 (209)
T 1meo_A           75 LEEFSIDIVCLAGFMRILSGPFVQKW  100 (209)
T ss_dssp             HHHTTCCEEEEESCCSCCCHHHHHHT
T ss_pred             HHHHCCCEEEEECCCHHCCHHHHHHH
T ss_conf             98619999999560010778999876


No 177
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=55.51  E-value=4.1  Score=19.25  Aligned_cols=89  Identities=12%  Similarity=0.182  Sum_probs=53.4

Q ss_pred             CCCEEEEEEC-CCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             8745999976-821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    2 NSLKIAVIAG-EISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         2 ~~mki~i~aG-E~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      ++|||-|+.. -.+...|    +.++++  .+++++.++..+.-++..       ++..      .++       .+...
T Consensus         6 ~~irigiIG~G~~~~~~h----~~~~~~--~~~~~lvav~d~~~~~~~-------~~~~------~~~-------~~~~~   59 (352)
T 3kux_A            6 DKIKVGLLGYGYASKTFH----APLIMG--TPGLELAGVSSSDASKVH-------ADWP------AIP-------VVSDP   59 (352)
T ss_dssp             CCEEEEEECCSHHHHHTH----HHHHHT--STTEEEEEEECSCHHHHH-------TTCS------SCC-------EESCH
T ss_pred             CCCEEEEECCCHHHHHHH----HHHHHC--CCCEEEEEEECCCHHHHH-------HHCC------CCC-------EECCH
T ss_conf             076399995879999999----999844--998399999898999999-------7469------997-------68989


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             86100128886898511776579999866301346311
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+.+.+..+|+|+..-.|.++..+++.+=+.  |++++
T Consensus        60 ~~ll~~~~iD~V~i~tp~~~H~~~~~~al~~--gkhv~   95 (352)
T 3kux_A           60 QMLFNDPSIDLIVIPTPNDTHFPLAQSALAA--GKHVV   95 (352)
T ss_dssp             HHHHHCSSCCEEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             HHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCCEE
T ss_conf             9995699999899888688889889999985--99772


No 178
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia mallei}
Probab=55.03  E-value=3.4  Score=19.78  Aligned_cols=17  Identities=18%  Similarity=0.169  Sum_probs=10.5

Q ss_pred             HCCCCCHHHHHHHHHHH
Q ss_conf             20548989999999998
Q gi|254780767|r  327 FNSMIRSEALVRWIERL  343 (383)
Q Consensus       327 iQ~~~~~~~i~~~~~~l  343 (383)
                      +.++-|++.+.....++
T Consensus       248 I~~~dt~~~L~~~~~~~  264 (292)
T 3lou_A          248 VDHSYRPEQLLAVGRDV  264 (292)
T ss_dssp             CCTTCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHH
T ss_conf             49999999999999999


No 179
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=54.92  E-value=9.6  Score=16.82  Aligned_cols=96  Identities=15%  Similarity=0.154  Sum_probs=53.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      ++|||.|+-...-|..|    +++|++  .+++++.++.++..+.+  +   .+.+  -.|+-+..+.       +..+.
T Consensus         5 ~~irvgiiG~G~~~~~~----~~~l~~--~~~~elvav~d~~~~~~--~---~~a~--~~~~~~~~~~-------~~d~~   64 (362)
T 1ydw_A            5 TQIRIGVMGCADIARKV----SRAIHL--APNATISGVASRSLEKA--K---AFAT--ANNYPESTKI-------HGSYE   64 (362)
T ss_dssp             -CEEEEEESCCTTHHHH----HHHHHH--CTTEEEEEEECSSHHHH--H---HHHH--HTTCCTTCEE-------ESSHH
T ss_pred             CCCEEEEECCCHHHHHH----HHHHHH--CCCCEEEEEECCCHHHH--H---HHHH--HHCCCCCCEE-------CCCHH
T ss_conf             96189999682999999----999985--89988999987999999--9---9999--8499855565-------38999


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             61001288868985117765799998663013463111
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      +.+....||+|+..--|+.+..+++.+=+.  |++|+-
T Consensus        65 ell~~~~iD~V~I~tp~~~H~~~~~~al~a--GkhVl~  100 (362)
T 1ydw_A           65 SLLEDPEIDALYVPLPTSLHVEWAIKAAEK--GKHILL  100 (362)
T ss_dssp             HHHHCTTCCEEEECCCGGGHHHHHHHHHTT--TCEEEE
T ss_pred             HHHCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEE
T ss_conf             996499988899958826889999999976--985999


No 180
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=54.31  E-value=6  Score=18.16  Aligned_cols=56  Identities=4%  Similarity=-0.093  Sum_probs=26.8

Q ss_pred             ECHHHHHHHHHHHHHHHCCCCC-CEEEECC--------CCCCCCCC-CHHHHHHHHHHHCCCCCCC
Q ss_conf             5117765799998663013463-1111002--------21100366-3557999998640156774
Q gi|254780767|r   95 VDNPDFTHRVAKRVRKKMPNLP-IINYVCP--------SVWAWREG-RARKMCAYINQVISILPFE  150 (383)
Q Consensus        95 iD~pgFnl~lak~lkk~~~~ip-vi~yv~P--------qvWAWr~~-R~k~~~~~~d~~~~ifpFE  150 (383)
                      -|-||-=-.+...+-+++.+|- .=+|+-|        ..|-+... -...+++.+..+.--|..+
T Consensus        16 pD~~GiVa~vt~~l~~~g~NI~~~~qf~D~~~~~FFmR~~f~~~~~~~~~~l~~~f~~~a~~~~m~   81 (286)
T 3n0v_A           16 PSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDDFDEAGFRAGLAERSEAFGMA   81 (286)
T ss_dssp             ECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSSCCHHHHHHHHHHHHGGGTCE
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCEE
T ss_conf             999865999999999789987466112268888489999997699989999998899875211200


No 181
>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis}
Probab=53.33  E-value=8.5  Score=17.18  Aligned_cols=41  Identities=22%  Similarity=0.426  Sum_probs=24.8

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEEC
Q ss_conf             6100128886898-5117765-799998663013463111100
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv~  122 (383)
                      +.+...+||++++ ++-||.+ +.+.+.+++..+++|++-+.+
T Consensus        41 ~~~~~~~pdlvl~d~~l~~~~g~~~~~~l~~~~~~~~vi~~t~   83 (225)
T 3c3w_A           41 ARVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTS   83 (225)
T ss_dssp             HHHHHHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGG
T ss_pred             HHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEC
T ss_conf             9998659989998277899861589887530289985786315


No 182
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8}
Probab=53.01  E-value=10  Score=16.62  Aligned_cols=49  Identities=14%  Similarity=0.277  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEE----ECH-----HHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             999999999986100128886898----511-----7765799998663013463111
Q gi|254780767|r   71 PQFIFRINQTVELIVSSKPDVLLI----VDN-----PDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        71 ~~~~~~~~~~~~~i~~~~Pd~vi~----iD~-----pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      ..+.+.++++++.+++++||.|+.    .|.     ...-..+.+.++....++|++.
T Consensus        44 ~~~~~~l~~i~~~a~~~~~D~vliaGDlf~~~~~~~~~~~~~~~~~~~~l~~~~~v~~  101 (336)
T 2q8u_A           44 EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVV  101 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             9999999999999997499999989877779998889999999999998742897899


No 183
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=52.84  E-value=6  Score=18.18  Aligned_cols=39  Identities=18%  Similarity=0.147  Sum_probs=19.6

Q ss_pred             HHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             6100128886898-5117765-7999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+.+||+||+ +.-||.| +.+.+.+|+..+++|+|-.
T Consensus        38 ~~l~~~~~DlvllDl~mP~~dGlell~~ir~~~p~~pVIvl   78 (368)
T 3dzd_A           38 KKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVI   78 (368)
T ss_dssp             HHHHHBCCSEEEEESEETTEETTTHHHHHHHHCTTCEEEEE
T ss_pred             HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             99871799999997989999999999999963998754455


No 184
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT}
Probab=52.63  E-value=8.3  Score=17.26  Aligned_cols=108  Identities=15%  Similarity=0.202  Sum_probs=53.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+..||+|+--+++    ...+++.+-+..  ++++......+                     |.              
T Consensus         1 ms~~~vLiVDD~~~----~~~~l~~~L~~~--G~~v~~a~~g~---------------------eA--------------   39 (127)
T 3i42_A            1 MSLQQALIVEDYQA----AAETFKELLEML--GFQADYVMSGT---------------------DA--------------   39 (127)
T ss_dssp             -CCEEEEEECSCHH----HHHHHHHHHHHT--TEEEEEESSHH---------------------HH--------------
T ss_pred             CCCCEEEEEECCHH----HHHHHHHHHHHC--CCEEEEECCHH---------------------HH--------------
T ss_conf             99888999957899----999999999987--99999989999---------------------99--------------


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             86100128886898-5117765-7999986630--1346311110022110036635579999986401567742232
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVM  154 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f  154 (383)
                      .+.+.+++||++++ +.-||.| +.+++.+|+.  ...+|++-.-+   ++....+... ..-+|..+ .=||..+-.
T Consensus        40 l~~l~~~~~dlillD~~mP~~~G~el~~~lr~~~~~~~~pii~lt~---~~~~~~~~~~-~~g~~~~L-~KP~~~~~L  112 (127)
T 3i42_A           40 LHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG---FAKNDLGKEA-CELFDFYL-EKPIDIASL  112 (127)
T ss_dssp             HHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC---C-CTTCCHHH-HHHCSEEE-ESSCCHHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC---CCCHHHHHHH-HHCCCEEE-ECCCCHHHH
T ss_conf             9999808999998627899984599999998476789994999978---8879999999-71787899-798999999


No 185
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=52.26  E-value=6.5  Score=17.94  Aligned_cols=46  Identities=11%  Similarity=0.102  Sum_probs=19.2

Q ss_pred             CEEEEECHHHHH---HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             868985117765---79999866301346311110022110036635579999986401
Q gi|254780767|r   90 DVLLIVDNPDFT---HRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVIS  145 (383)
Q Consensus        90 d~vi~iD~pgFn---l~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~  145 (383)
                      |++|.|.++|-+   +..++.+|++  |++++-.-        ..+-..+.+++|+.+.
T Consensus        81 Dl~I~iS~sG~t~~~~~~~~~ak~~--g~~ii~IT--------~~~~s~la~~ad~~l~  129 (186)
T 1m3s_A           81 DLVIIGSGSGETKSLIHTAAKAKSL--HGIVAALT--------INPESSIGKQADLIIR  129 (186)
T ss_dssp             CEEEEECSSSCCHHHHHHHHHHHHT--TCEEEEEE--------SCTTSHHHHHCSEEEE
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHC--CCEEEEEE--------CCCCCHHHHHCCEEEE
T ss_conf             9999983897514699999999987--99599997--------9999967996899999


No 186
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=51.95  E-value=11  Score=16.51  Aligned_cols=91  Identities=12%  Similarity=0.266  Sum_probs=52.5

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      ++|||.|+-+   |-+ |..+++.|.+  ..++...++..++.++.--.       .+...+ ++ ..       ...+.
T Consensus        15 ~~mki~vlG~---G~v-G~~~~~~L~~--~~~v~~~~~~~~~~~~~~~~-------~~~~~~-d~-~~-------~~~l~   72 (365)
T 2z2v_A           15 RHMKVLILGA---GNI-GRAIAWDLKD--EFDVYIGDVNNENLEKVKEF-------ATPLKV-DA-SN-------FDKLV   72 (365)
T ss_dssp             -CCEEEEECC---SHH-HHHHHHHHTT--TSEEEEEESCHHHHHHHTTT-------SEEEEC-CT-TC-------HHHHH
T ss_pred             CCCEEEEECC---CHH-HHHHHHHHHC--CCCEEEEECCHHHHHHHHHH-------CCCEEE-EC-CC-------HHHHH
T ss_conf             7257999997---599-9999999864--79869998778889987742-------773687-34-99-------99999


Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             6100128886898511776579999866301346311
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+  .+.|+||-.=-|.+|..+++.+-+.  |++++
T Consensus        73 ~~~--~~~d~Vi~~~~~~~~~~v~~~~~~~--g~~yi  105 (365)
T 2z2v_A           73 EVM--KEFELVIGALPGFLGFKSIKAAIKS--KVDMV  105 (365)
T ss_dssp             HHH--TTCSCEEECCCHHHHHHHHHHHHHT--TCCEE
T ss_pred             HHH--HCCCEEEECCCCCCHHHHHHHHHHC--CCCCC
T ss_conf             997--3589999967851025899998752--85221


No 187
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural genomics center for infectious disease; 2.20A {Anaplasma phagocytophilum HZ}
Probab=51.62  E-value=2.5  Score=20.71  Aligned_cols=86  Identities=16%  Similarity=0.264  Sum_probs=40.2

Q ss_pred             CCCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             9874599997-682147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      .++|||.|.+ |.  |-. ...|+.+++.. ..++++.++-.++-.+.|...   .....+--+  ...+..   ..-.+
T Consensus         6 ~k~mkIavl~SG~--Gsn-l~aii~~~~~~-~~~~eI~~VIsn~~~~~~l~~---~~~~~i~~~--~~~~~~---~~~~~   73 (215)
T 3kcq_A            6 KKELRVGVLISGR--GSN-LEALAKAFSTE-ESSVVISCVISNNAEARGLLI---AQSYGIPTF--VVKRKP---LDIEH   73 (215)
T ss_dssp             -CCEEEEEEESSC--CHH-HHHHHHHTCCC--CSEEEEEEEESCTTCTHHHH---HHHTTCCEE--ECCBTT---BCHHH
T ss_pred             CCCCEEEEEEECC--CHH-HHHHHHHHHCC-CCCEEEEEEEECCCCCHHHHH---HHHCCCCEE--ECCCCC---CCHHH
T ss_conf             9987899999398--773-99999997769-988399999957964177767---775499887--426676---06899


Q ss_pred             HHHHCCCCCCCEEEEECHH
Q ss_conf             9861001288868985117
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNP   98 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~p   98 (383)
                      ..+.+++.+||+++++-|.
T Consensus        74 ~~~~l~~~~~Dliv~~g~~   92 (215)
T 3kcq_A           74 ISTVLREHDVDLVCLAGFM   92 (215)
T ss_dssp             HHHHHHHTTCSEEEESSCC
T ss_pred             HHHHHHHCCCCEEEEECCC
T ss_conf             9999986599999990434


No 188
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase, RV2981C, structural genomics, TB structural genomics consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=51.53  E-value=9.4  Score=16.90  Aligned_cols=39  Identities=23%  Similarity=0.485  Sum_probs=27.8

Q ss_pred             CCCCEEEEEECCCCHH-----HHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147-----899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGD-----LLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD-----~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++|||.|+.|..|..     .-|..++++|.+. ..++...++.
T Consensus         8 ~~K~kI~vl~GG~S~E~eVSl~S~~~v~~~L~~~-~y~v~~i~i~   51 (373)
T 3lwb_A            8 DRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSR-RFDVIAVGIT   51 (373)
T ss_dssp             TTCEEEEEEEEC-----CHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-CCEEEEEEEC
T ss_conf             8987799996867740699999999999975550-8869999984


No 189
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase, PHI, structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=51.53  E-value=8.1  Score=17.32  Aligned_cols=21  Identities=5%  Similarity=-0.108  Sum_probs=9.6

Q ss_pred             CCHHHHHHHHHHCCCCCEEEECC
Q ss_conf             11189998764027351262016
Q gi|254780767|r  211 PFFESAVASLVKRNPFFRFSLVT  233 (383)
Q Consensus       211 P~~l~~~~~l~~~~~~~~~~i~~  233 (383)
                      +-.+++++...++.  ...+..+
T Consensus        96 ~~~i~~~~~ak~~g--~~vI~IT  116 (180)
T 1jeo_A           96 ESVLTVAKKAKNIN--NNIIAIV  116 (180)
T ss_dssp             HHHHHHHHHHHTTC--SCEEEEE
T ss_pred             HHHHHHHHHHHHCC--CCEEEEE
T ss_conf             89999999999759--9799996


No 190
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=51.51  E-value=9.1  Score=16.98  Aligned_cols=24  Identities=17%  Similarity=0.385  Sum_probs=12.0

Q ss_pred             CCCCEEEE-ECHHHHH-HHHHHHHHH
Q ss_conf             28886898-5117765-799998663
Q gi|254780767|r   87 SKPDVLLI-VDNPDFT-HRVAKRVRK  110 (383)
Q Consensus        87 ~~Pd~vi~-iD~pgFn-l~lak~lkk  110 (383)
                      .+||++|+ ++-||.| +.+++.+|.
T Consensus        57 ~~~dlii~D~~mp~~~G~el~~~ir~   82 (143)
T 3m6m_D           57 EDYDAVIVDLHMPGMNGLDMLKQLRV   82 (143)
T ss_dssp             SCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf             89999998388899988999999986


No 191
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=51.19  E-value=11  Score=16.44  Aligned_cols=39  Identities=26%  Similarity=0.168  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
Q ss_conf             59999999999861001288868985117765799998663
Q gi|254780767|r   70 LPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRK  110 (383)
Q Consensus        70 ~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk  110 (383)
                      ...+.+..+++.+.+.+.+||++|+|..-|+-+  |..+.+
T Consensus         8 ~~~i~~~i~~La~~i~~~~~d~IvgI~rgG~~~--a~~la~   46 (153)
T 1vdm_A            8 WWQVDRAIFALAEKLREYKPDVIIGVARGGLIP--AVRLSH   46 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHH--HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH--HHHHHH
T ss_conf             999999999999998755999999988886899--999999


No 192
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 1cye_A 2che_A 2chf_A 2pl9_A* 2pmc_A ...
Probab=51.04  E-value=9.2  Score=16.94  Aligned_cols=37  Identities=16%  Similarity=0.348  Sum_probs=21.6

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEE
Q ss_conf             00128886898-5117765-7999986630--134631111
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINY  120 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~y  120 (383)
                      +.+.+||++++ +.-||.+ +.+++.+|+.  ..++|+|-.
T Consensus        45 ~~~~~~dliilD~~mP~~dG~el~~~ir~~~~~~~~piI~l   85 (128)
T 1jbe_A           45 LQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMV   85 (128)
T ss_dssp             HTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEE
T ss_pred             HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             76289999999699999998999999997567799938999


No 193
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=50.67  E-value=8.1  Score=17.30  Aligned_cols=89  Identities=9%  Similarity=0.096  Sum_probs=49.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             59999768214789999999999738998399997178999478806504445311013674664599999999998610
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELI   84 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i   84 (383)
                      |.-|+....-|..|    +.++++. + ++++.|+.++....+  +...  ++++   +          -+.+....+.+
T Consensus         2 ~~GIIG~G~~~~~~----~~~~~~~-~-~~~l~av~d~~~~~~--~~~~--~~~~---~----------~~~~~~~~e~l   58 (332)
T 2glx_A            2 RWGLIGASTIAREW----VIGAIRA-T-GGEVVSMMSTSAERG--AAYA--TENG---I----------GKSVTSVEELV   58 (332)
T ss_dssp             EEEEESCCHHHHHT----HHHHHHH-T-TCEEEEEECSCHHHH--HHHH--HHTT---C----------SCCBSCHHHHH
T ss_pred             CEEEECCHHHHHHH----HHHHHHC-C-CCEEEEEECCCHHHH--HHHH--HHHC---C----------CCEECCHHHHH
T ss_conf             09999966999999----9999738-9-978999984999999--9999--9809---9----------94018999995


Q ss_pred             CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             0128886898511776579999866301346311
Q gi|254780767|r   85 VSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        85 ~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      ...++|+|+..--|.++..+++++=+.  |++++
T Consensus        59 ~~~~iD~v~i~tp~~~H~~~~~~al~~--gk~v~   90 (332)
T 2glx_A           59 GDPDVDAVYVSTTNELHREQTLAAIRA--GKHVL   90 (332)
T ss_dssp             TCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHHC--CCCEE
T ss_conf             699999999968844657889999986--99875


No 194
>2r79_A Periplasmic binding protein; heme transport, transport protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=50.67  E-value=8.7  Score=17.09  Aligned_cols=45  Identities=16%  Similarity=0.234  Sum_probs=27.1

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECC-CCCCC
Q ss_conf             8610012888689851177657999986630134631111002-21100
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCP-SVWAW  128 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~P-qvWAW  128 (383)
                      .+.|.+-+||+|+..++.+ +-.....+++.  ++|++.+-.+ +.|-|
T Consensus        52 ~E~i~~l~PDlIi~~~~~~-~~~~~~~~~~~--~i~~~~~~~~~~~~~~   97 (283)
T 2r79_A           52 AEGVLALRPDILIGTEEMG-PPPVLKQLEGA--GVRVETLSAKPDLEAL   97 (283)
T ss_dssp             HHHHHTTCCSEEEECTTCC-CHHHHHHHHHT--TCCEEECCCCSSHHHH
T ss_pred             HHHHHHCCCCEEEEECCCC-CHHHHHHHHHC--CCCEEEECCCCCHHHH
T ss_conf             9999724999699504545-30567777623--8714772478987888


No 195
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=50.64  E-value=11  Score=16.38  Aligned_cols=39  Identities=8%  Similarity=0.158  Sum_probs=26.6

Q ss_pred             CCCCEEEEEECCCCHHHHH-----HHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899-----999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLA-----GDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~-----a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++.||.|+.|..|..---     ..+.++|++. +.++...++.
T Consensus        35 m~k~~I~vl~GG~S~E~eiSl~Sg~~v~~aL~~~-~y~v~~i~i~   78 (383)
T 3k3p_A           35 MSKETLVLLYGGRSAERDVSVLSAESVMRAINYD-NFLVKTYFIT   78 (383)
T ss_dssp             --CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCEEEEEEEC
T ss_conf             5798799996936764299999999999975363-8979999985


No 196
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi strain cl brener} PDB: 3k7s_A* 3k7o_A* 3k8c_A*
Probab=50.51  E-value=11  Score=16.37  Aligned_cols=10  Identities=30%  Similarity=0.405  Sum_probs=5.0

Q ss_pred             HHHHHCCCEE
Q ss_conf             8876275302
Q gi|254780767|r  281 ELALCGIPVV  290 (383)
Q Consensus       281 E~al~g~P~I  290 (383)
                      -.|+.++|-|
T Consensus        96 sIaANK~~GI  105 (179)
T 3k7p_A           96 SIAANKVPGV  105 (179)
T ss_dssp             HHHHHTSTTC
T ss_pred             HHHHHCCCCC
T ss_conf             8887648996


No 197
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=50.00  E-value=11  Score=16.32  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=24.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             599997682147899999999997389983999971
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+.+++|-.||  .|..+.+.|-+....+.++...+
T Consensus         7 KvalITGas~G--IG~aiA~~lA~~~~~Ga~Vv~~~   40 (259)
T 1oaa_A            7 AVCVLTGASRG--FGRALAPQLARLLSPGSVMLVSA   40 (259)
T ss_dssp             EEEEESSCSSH--HHHHHHHHHHTTBCTTCEEEEEE
T ss_pred             CEEEECCCCCH--HHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             88999077878--99999999986134899899998


No 198
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides}
Probab=49.76  E-value=5.3  Score=18.55  Aligned_cols=94  Identities=11%  Similarity=0.042  Sum_probs=44.8

Q ss_pred             CCEEEEECCCCH------HHHHHHHHH---HCCCHHHHHHHHHHCCCEEEEC--CCC-CCEEE-EEE----CCCCCCEEE
Q ss_conf             850552055203------578876355---2331156688876275302540--577-41000-010----246761023
Q gi|254780767|r  251 SPEIIIDKEQKK------QVFMTCNAA---MAASGTVILELALCGIPVVSIY--KSE-WIVNF-FIF----YIKTWTCAL  313 (383)
Q Consensus       251 ~~~i~~~~~~~~------~~l~~sd~a---i~~SGTaTLE~al~g~P~IV~Y--k~~-~lt~~-i~~----lik~~~i~L  313 (383)
                      ..+|.+.+++..      +.+....+-   .+.+|...++.+....|-+|+-  .+. -.+.+ +.+    .-.++.|.|
T Consensus       160 ~~~ILiVdD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a~~~~~~~~~Dlil~Di~mp~~mdG~~~~~~ir~~~~~piI~l  239 (286)
T 3n0r_A          160 ATEVLIIEDEPVIAADIEALVRELGHDVTDIAATRGEALEAVTRRTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFI  239 (286)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf             63299988879999999999997699748861328999999751799889981788789889999999986699838999


Q ss_pred             EHHHCCC------CCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             0244078------4261242054898999999999844
Q gi|254780767|r  314 PNLIVDY------PLVPEYFNSMIRSEALVRWIERLSQ  345 (383)
Q Consensus       314 pNii~~~------~ivPEliQ~~~~~~~i~~~~~~ll~  345 (383)
                      --- .+.      .=.-.|+.+-++++.|...+.+.|.
T Consensus       240 Ta~-~~~~~~~~~~g~~~yl~KP~~~~~L~~~i~~aL~  276 (286)
T 3n0r_A          240 TAF-PERLLTGERPEPTFLITKPFQPETVKAAIGQALF  276 (286)
T ss_dssp             ESC-GGGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHH
T ss_pred             ECC-HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             568-8899999986999899898999999999999998


No 199
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=49.73  E-value=12  Score=16.29  Aligned_cols=40  Identities=20%  Similarity=0.392  Sum_probs=25.4

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEEC
Q ss_conf             100128886898-5117765-79999866301--3463111100
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYVC  122 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv~  122 (383)
                      .+.+.+||+|++ ++-||.+ +.+++.+|+..  .++|++-+-+
T Consensus        40 ~l~~~~pdlvllD~~lp~~~G~~l~~~lr~~~~~~~~pii~~t~   83 (119)
T 2j48_A           40 QLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLG   83 (119)
T ss_dssp             HHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEES
T ss_pred             HHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf             99817999899963799999999999998288889864999977


No 200
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductase; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=49.73  E-value=12  Score=16.29  Aligned_cols=130  Identities=14%  Similarity=0.250  Sum_probs=83.8

Q ss_pred             CCCEEEEEEC-----CCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCC-CHHHHHHHHHHHCCCCCEEEEECCCCHHH
Q ss_conf             5650599853-----87430123051118999876402735126201663-36889999996048885055205520357
Q gi|254780767|r  191 QWKKILLLPG-----SRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVS-SQENLVRCIVSKWDISPEIIIDKEQKKQV  264 (383)
Q Consensus       191 ~~~~I~llPG-----SR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (383)
                      +.+.|.+-||     |+.|      -..-+.++.|.++..+.+|-|..+. -......-.+.+.+.+.+++..-++...-
T Consensus        45 ~A~~VIIVPGYGMAVAQAQ------h~V~EL~~~L~~~G~~V~faIHPVAGRmPGhmNVLLAEa~VpYd~~~emdeiN~~  118 (203)
T 2fsv_C           45 NASKVIIVPGYGMAVAQAQ------HALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSS  118 (203)
T ss_dssp             HCSEEEEEECHHHHHHTCH------HHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHTTCCGGGEEEHHHHGGG
T ss_pred             CCCEEEEECCHHHHHHHHH------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHCHHHHCCC
T ss_conf             6985999758279999999------9999999999968982489863243448872068998616987886376650653


Q ss_pred             HHHHHHHHCCCHHHHH--------HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHH
Q ss_conf             8876355233115668--------88762753025405774100001024676102302440784261242
Q gi|254780767|r  265 FMTCNAAMAASGTVIL--------ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYF  327 (383)
Q Consensus       265 l~~sd~ai~~SGTaTL--------E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEli  327 (383)
                      +..+|++|+.---=+.        ..-+.|-|.+=+.|..-. -.++|=+..-|.+..|=+.-++-.-=|+
T Consensus       119 f~~~Dv~lViGANDvvNPaA~~d~~spi~GMPvl~v~kak~v-iv~krs~~~Gyagv~NpLf~~~nt~mlf  188 (203)
T 2fsv_C          119 FQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVWKAGTV-LFIKRSMASGYAGVENELFFRNNTMMLF  188 (203)
T ss_dssp             STTCSEEEEESCCGGGCGGGTSCTTSTTTTCCCCCGGGSSEE-EEEESSSCCCTTCCCCGGGGSTTEEEEE
T ss_pred             CCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECCEE-EEEECCCCCCCCCCCCCCEECCCCEEEE
T ss_conf             001768999436554482320699996268825432507789-9997887887567877555358836993


No 201
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.76A {Sinorhizobium medicae WSM419}
Probab=49.65  E-value=12  Score=16.28  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=22.9

Q ss_pred             CCCCEEEEE-CHHH-HH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             288868985-1177-65-79999866301346311110
Q gi|254780767|r   87 SKPDVLLIV-DNPD-FT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        87 ~~Pd~vi~i-D~pg-Fn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .++|++|+- +-|| -| +.+++.+|+..+++|++..-
T Consensus        49 ~~~dlvi~D~~~p~~~~G~el~~~ir~~~~~~pii~~s   86 (132)
T 2rdm_A           49 AAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYIS   86 (132)
T ss_dssp             CCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEE
T ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99879987300589999999999999749899689997


No 202
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=49.61  E-value=12  Score=16.28  Aligned_cols=29  Identities=10%  Similarity=0.020  Sum_probs=18.5

Q ss_pred             HHHCCCHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf             23051118999876402735126201663
Q gi|254780767|r  207 YKILPFFESAVASLVKRNPFFRFSLVTVS  235 (383)
Q Consensus       207 ~~~lP~~l~~~~~l~~~~~~~~~~i~~~~  235 (383)
                      ..++|.|.++++.+.+..++..+++-.++
T Consensus       185 ~~~l~~~~~~i~~l~~~~~~~~iivGGa~  213 (258)
T 2i2x_B          185 TTTMYAFKEVNDMLLENGIKIPFACGGGA  213 (258)
T ss_dssp             TTTTTHHHHHHHHHHTTTCCCCEEEESTT
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf             67679999999999974999948988987


No 203
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=49.53  E-value=9.5  Score=16.87  Aligned_cols=36  Identities=11%  Similarity=0.208  Sum_probs=19.3

Q ss_pred             CCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEE
Q ss_conf             0128886898-5117765-7999986630--134631111
Q gi|254780767|r   85 VSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINY  120 (383)
Q Consensus        85 ~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~y  120 (383)
                      .+++||++|+ +.-|+.| +.+.+.+|+.  ..++|++-.
T Consensus        48 ~~~~~dlii~D~~mP~~dG~~l~~~ir~~~~~~~~pii~l   87 (129)
T 1p6q_A           48 AQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIIL   87 (129)
T ss_dssp             HTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEEC
T ss_pred             HHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             7189989998458899987999999983856689829999


No 204
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3iie_A
Probab=49.42  E-value=12  Score=16.26  Aligned_cols=28  Identities=11%  Similarity=0.099  Sum_probs=19.1

Q ss_pred             CCCCCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             0784261242054898999999999844
Q gi|254780767|r  318 VDYPLVPEYFNSMIRSEALVRWIERLSQ  345 (383)
Q Consensus       318 ~~~~ivPEliQ~~~~~~~i~~~~~~ll~  345 (383)
                      +|+..|--|++++..-..|.+-+.+.++
T Consensus       346 ANEiAV~~FL~~KI~F~dI~~iI~~~l~  373 (406)
T 1q0q_A          346 ANEITVAAFLAQQIRFTDIAALNLSVLE  373 (406)
T ss_dssp             HHHHHHHHHHTTSSCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             8899999998589984789999999998


No 205
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=49.32  E-value=12  Score=16.25  Aligned_cols=29  Identities=24%  Similarity=0.328  Sum_probs=16.8

Q ss_pred             CCCCCCCHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             07842612420548989999999998449
Q gi|254780767|r  318 VDYPLVPEYFNSMIRSEALVRWIERLSQD  346 (383)
Q Consensus       318 ~~~~ivPEliQ~~~~~~~i~~~~~~ll~d  346 (383)
                      +|+..|--|++++..--.|.+-+.+.+++
T Consensus       312 ANEvAV~~FL~~kI~F~dI~~iI~~~L~~  340 (376)
T 3a06_A          312 ADEVAVEAFLKGRIRFGGIHRVIEKTLEE  340 (376)
T ss_dssp             HHHHHHHHHHTTSSCTTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             98999999995899867899999999985


No 206
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C}
Probab=48.89  E-value=11  Score=16.45  Aligned_cols=36  Identities=19%  Similarity=0.157  Sum_probs=14.2

Q ss_pred             CCCCCCCEEEE-ECHHHH---HHHHHHHHHHHCCCCCCEE
Q ss_conf             00128886898-511776---5799998663013463111
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDF---THRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgF---nl~lak~lkk~~~~ipvi~  119 (383)
                      +.+.+||++|+ +|.|+.   -+....++++..+.+|++-
T Consensus        46 l~~~~~d~vilD~~l~~~~~~gl~~~~~~~~~~~~~pvi~   85 (136)
T 3kto_A           46 QISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIV   85 (136)
T ss_dssp             CCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEE
T ss_conf             9847998899993686478840899999975026886799


No 207
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=48.61  E-value=12  Score=16.18  Aligned_cols=23  Identities=17%  Similarity=0.530  Sum_probs=14.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             5999976821478999999999973
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEM   29 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~   29 (383)
                      |+.+++|-.||  .|..+.+.|-+.
T Consensus        33 KvalITGas~G--IG~aiA~~la~~   55 (279)
T 1xg5_A           33 RLALVTGASGG--IGAAVARALVQQ   55 (279)
T ss_dssp             CEEEEESTTSH--HHHHHHHHHHHT
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC
T ss_conf             88999277878--999999999987


No 208
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=48.05  E-value=11  Score=16.42  Aligned_cols=79  Identities=13%  Similarity=0.271  Sum_probs=45.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |++-||+|+--++   ..+..|...|++.   ++++.......                                   +.
T Consensus         5 ~~~pkILiVeDd~---~~~~~l~~~L~~~---g~~V~~a~~~~-----------------------------------ea   43 (233)
T 1ys7_A            5 VTSPRVLVVDDDS---DVLASLERGLRLS---GFEVATAVDGA-----------------------------------EA   43 (233)
T ss_dssp             --CCEEEEECSCH---HHHHHHHHHHHHT---TCEEEEESSHH-----------------------------------HH
T ss_pred             CCCCEEEEEECCH---HHHHHHHHHHHHC---CCEEEEECCHH-----------------------------------HH
T ss_conf             9998799997999---9999999999978---99999989999-----------------------------------99


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             86100128886898-5117765-7999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      .+.+..++||++|+ +..||-+ +.+..++++....+|++-.
T Consensus        44 ~~~~~~~~~dlvilD~~lp~~~g~~~~~~~r~~~~~~~iiil   85 (233)
T 1ys7_A           44 LRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVL   85 (233)
T ss_dssp             HHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEECC
T ss_conf             999974799789752238755686223101235777623314


No 209
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferase, sugar transport, phosphorylation; NMR {Escherichia coli K12} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=47.91  E-value=12  Score=16.11  Aligned_cols=89  Identities=16%  Similarity=0.321  Sum_probs=51.6

Q ss_pred             CCCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             9874599997-682147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |.+.||+++| |..|..+.+..+-++.+++ +-++++..++-.+....                                
T Consensus         1 m~~k~IlL~C~~G~STs~l~~km~~~a~~~-~~~~~i~A~~~~~~~~~--------------------------------   47 (106)
T 1e2b_A            1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKY-EVPVIIEAFPETLAGEK--------------------------------   47 (106)
T ss_dssp             CCCEEEEEECSSSTTTHHHHHHHHHHHHHS-CCSEEEEEECSSSTTHH--------------------------------
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEEHHHHHHH--------------------------------
T ss_conf             998889998489611999999999999987-99889999407888752--------------------------------


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
Q ss_conf             98610012888689851177657999986630134631111002211003663
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGR  132 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R  132 (383)
                          +  .+.|++++  .|-.-+...+ +++...++|+ ..|.|+..+|-.+.
T Consensus        48 ----~--~~~DviLL--~PQv~~~~~~-i~~~~~~~pV-~vI~~~~Yg~mdg~   90 (106)
T 1e2b_A           48 ----G--QNADVVLL--GPQIAYMLPE-IQRLLPNKPV-EVIDSLLYGKVDGL   90 (106)
T ss_dssp             ----H--HHCSEEEE--CTTSGGGHHH-HHHHSSSSCC-CBCCHHHHTTTCTT
T ss_pred             ----C--CCCCEEEE--CHHHHHHHHH-HHHHCCCCCE-EEECHHHHHCCCHH
T ss_conf             ----4--79979998--6889988999-9988089998-98786761156899


No 210
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=47.72  E-value=12  Score=16.09  Aligned_cols=39  Identities=18%  Similarity=0.387  Sum_probs=28.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
Q ss_conf             599997682147899999999997389983999971789994
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQK   46 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~   46 (383)
                      |+.+++|-.||  .|..+.+.|-++ +.++-+.+...+.+++
T Consensus         9 KvalITGas~G--IG~a~a~~la~~-Ga~Vv~~~r~~~~l~~   47 (319)
T 3ioy_A            9 RTAFVTGGANG--VGIGLVRQLLNQ-GCKVAIADIRQDSIDK   47 (319)
T ss_dssp             CEEEEETTTST--HHHHHHHHHHHT-TCEEEEEESCHHHHHH
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCHHHHHH
T ss_conf             88999288878--999999999987-9989999898899999


No 211
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotide, structural genomics, NPPSFA; 2.80A {Thermus thermophilus HB8}
Probab=47.49  E-value=13  Score=16.07  Aligned_cols=87  Identities=14%  Similarity=0.238  Sum_probs=44.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE-CCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf             459999768214789999999999738998399997-1789994788065044453110136746645999999999986
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGV-GGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE   82 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~gi-GG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~   82 (383)
                      |||+++-..  |=-||  |..+|++. +.--+++-. |-+.|+..+ +. .++..                  -...+.+
T Consensus         1 MkVLviGsG--grEhA--ia~~l~~~-~~~~~v~~~pgN~g~~~~~-~~-~~~~~------------------d~~~i~~   55 (417)
T 2ip4_A            1 MKVLVVGSG--GREHA--LLWKAAQS-PRVKRLYAAPGNAGMEALA-EL-VPWNG------------------DVEALAD   55 (417)
T ss_dssp             CEEEEEESS--HHHHH--HHHHHHTC-SSCCEEEEEECCTTGGGTS-EE-CCCCS------------------CHHHHHH
T ss_pred             CEEEEECCC--HHHHH--HHHHHHHC-CCCCEEEEECCCHHHHHHC-EE-ECCCC------------------CHHHHHH
T ss_conf             989998978--99999--99999729-9989899968976777517-42-15668------------------9999999


Q ss_pred             HCCCCCCCEEEE-ECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             100128886898-511776579999866301346311
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      .+++++||.||. -..|= .--++..+++.  |+|++
T Consensus        56 ~~~~~~idlvivGpE~pL-~~gl~d~l~~~--gi~v~   89 (417)
T 2ip4_A           56 WALAEGIDLTLVGPEAPL-VEGIADAFQAR--GLLLF   89 (417)
T ss_dssp             HHHHHTCCEEEECSSHHH-HTTHHHHHHHH--TCCEE
T ss_pred             HHHHHCCCEEEECCCHHH-HHHHHHHHHHC--CCCCC
T ss_conf             999859999998974788-87889999857--99765


No 212
>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}
Probab=47.49  E-value=4.2  Score=19.20  Aligned_cols=20  Identities=20%  Similarity=0.594  Sum_probs=15.3

Q ss_pred             EEEECCCCCCCCCCCHHHHH
Q ss_conf             11100221100366355799
Q gi|254780767|r  118 INYVCPSVWAWREGRARKMC  137 (383)
Q Consensus       118 i~yv~PqvWAWr~~R~k~~~  137 (383)
                      -+|++|.||.|...+--++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~   23 (288)
T 3c8e_A            4 NTYQPAKVWTWDKSAGGAFA   23 (288)
T ss_dssp             -CCCCCSSCCCCTTCCCTTT
T ss_pred             CCCCCCCCCCCCCCCCCCCC
T ss_conf             88999742434687888645


No 213
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=47.28  E-value=13  Score=16.04  Aligned_cols=38  Identities=21%  Similarity=0.392  Sum_probs=24.4

Q ss_pred             CCCCCCCEEEEE-CHH-HHH-HHHHHHHHHHC--CCCCCEEEE
Q ss_conf             001288868985-117-765-79999866301--346311110
Q gi|254780767|r   84 IVSSKPDVLLIV-DNP-DFT-HRVAKRVRKKM--PNLPIINYV  121 (383)
Q Consensus        84 i~~~~Pd~vi~i-D~p-gFn-l~lak~lkk~~--~~ipvi~yv  121 (383)
                      +.+++||++|+= +-| |.+ +.+++.+|+..  .++|++-.-
T Consensus        45 l~~~~pdliilD~~lp~~~~G~~l~~~ir~~~~~~~iPii~lt   87 (127)
T 2gkg_A           45 IRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVIIG   87 (127)
T ss_dssp             HHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEEE
T ss_pred             HHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             9847999999975777688899999999838888998389996


No 214
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=47.09  E-value=13  Score=16.03  Aligned_cols=54  Identities=4%  Similarity=-0.017  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             674664599999999998610012888689851177657999986630134631111
Q gi|254780767|r   64 MQVVRHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        64 ~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      ..++.+--.+....+.+.+.+...++|.|+++++-||=+-  ..+-.. .|+|+++.
T Consensus        29 ~~il~~P~~~~~l~~~la~~~~~~~~d~Vvgie~~Gi~lA--~~lA~~-Lg~p~v~~   82 (186)
T 1l1q_A           29 SDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILG--GIVANS-LGVGFVAL   82 (186)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHH--HHHHHH-HTCEEEEE
T ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH--HHHHHH-CCCCEEEE
T ss_conf             2475799999999999999706699979998455444778--999998-19987877


No 215
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=46.35  E-value=13  Score=15.95  Aligned_cols=33  Identities=21%  Similarity=0.325  Sum_probs=25.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             98745999976821478999999999973899839999717
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG   41 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG   41 (383)
                      |++ ||||. | + | ..|+.|++.|.++   +.++.|+.-
T Consensus         4 M~~-~vlIt-G-a-G-fIGs~lv~~Ll~~---G~~V~~l~R   36 (286)
T 3ius_A            4 MTG-TLLSF-G-H-G-YTARVLSRALAPQ---GWRIIGTSR   36 (286)
T ss_dssp             -CC-EEEEE-T-C-C-HHHHHHHHHHGGG---TCEEEEEES
T ss_pred             CCC-EEEEE-C-C-C-HHHHHHHHHHHHC---CCEEEEEEC
T ss_conf             898-38998-9-6-1-9999999999978---998999948


No 216
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=45.94  E-value=13  Score=15.91  Aligned_cols=39  Identities=15%  Similarity=0.297  Sum_probs=25.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
Q ss_conf             98745999976821478999999999973899839999717899
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSL   44 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m   44 (383)
                      ||  |+-+++|-.+|  .|..+.+.|-+. +.++-+.+.-.+..
T Consensus         1 Mn--KvalVTGas~G--IG~aia~~la~~-Ga~V~i~~r~~~~~   39 (250)
T 2cfc_A            1 MS--RVAIVTGASSG--NGLAIATRFLAR-GDRVAALDLSAETL   39 (250)
T ss_dssp             CC--CEEEEETTTSH--HHHHHHHHHHHT-TCEEEEEESCHHHH
T ss_pred             CC--CEEEECCCCCH--HHHHHHHHHHHC-CCEEEEEECCHHHH
T ss_conf             99--89999178978--999999999987-99899998988899


No 217
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=45.78  E-value=8.3  Score=17.25  Aligned_cols=36  Identities=14%  Similarity=0.271  Sum_probs=18.5

Q ss_pred             CCCCCEEEEECHHHHHHH-HHHHHHHHCCCCCCEEEE
Q ss_conf             128886898511776579-999866301346311110
Q gi|254780767|r   86 SSKPDVLLIVDNPDFTHR-VAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFnl~-lak~lkk~~~~ipvi~yv  121 (383)
                      ..+|.++|++--.|-||. |..+.+.....+.+.-.|
T Consensus        86 ~~k~riaIlvS~~gh~L~~Ll~~~~~g~L~~eI~~VI  122 (287)
T 3nrb_A           86 TDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGII  122 (287)
T ss_dssp             TCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEE
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEE
T ss_conf             5682489999089700999999877456990499998


No 218
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=45.68  E-value=13  Score=15.88  Aligned_cols=25  Identities=8%  Similarity=0.010  Sum_probs=12.0

Q ss_pred             CEEEEHHHCCCCCCCHHHCCCCCHHH
Q ss_conf             10230244078426124205489899
Q gi|254780767|r  310 TCALPNLIVDYPLVPEYFNSMIRSEA  335 (383)
Q Consensus       310 ~i~LpNii~~~~ivPEliQ~~~~~~~  335 (383)
                      |+|+|=+|-.+.+ -+.+.-+++.++
T Consensus       263 ~~s~P~~ig~~Gi-~~i~~l~L~~~E  287 (309)
T 1hyh_A          263 YLSYPAIIGRDGV-LAETTLDLTTDE  287 (309)
T ss_dssp             EEEEEEEEETTEE-EEECCCCCCHHH
T ss_pred             EEEEEEEEECCCE-EEEECCCCCHHH
T ss_conf             9999999917925-899878999999


No 219
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=45.15  E-value=14  Score=15.83  Aligned_cols=62  Identities=19%  Similarity=0.083  Sum_probs=26.4

Q ss_pred             HHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHH
Q ss_conf             552331156688876275302540577410000102467610230244078426124205489899
Q gi|254780767|r  270 AAMAASGTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEA  335 (383)
Q Consensus       270 ~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~  335 (383)
                      .+++.+..--.++.+.+...++.- .-++...  .-++--|+|+|=+|-.+.+ -+.+.-++++++
T Consensus       245 ~~ia~a~~~i~~ail~~~~~v~~~-sv~~~g~--yG~~~v~~s~P~~ig~~Gv-~~v~~l~L~~~E  306 (331)
T 1pzg_A          245 YAPAASAVAMATSFLNDEKRVIPC-SVYCNGE--YGLKDMFIGLPAVIGGAGI-ERVIELELNEEE  306 (331)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEE-EEEEESG--GGCEEEEEEEEEEEETTEE-EEECCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEE-EEEECCC--CCCCCEEEEEEEEECCCEE-EEECCCCCCHHH
T ss_conf             889987889899874379978999-9991577--7888669999999859858-997789999999


No 220
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=45.06  E-value=14  Score=15.82  Aligned_cols=51  Identities=22%  Similarity=0.329  Sum_probs=27.4

Q ss_pred             EHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-CHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             1367466459999999999861001288868985-11776579999866301346311
Q gi|254780767|r   62 GIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIV-DNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        62 G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~i-D~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      ||.-.++++    +.+.++.+.+++.-||+++++ -.|-  --++..+++..+..+++
T Consensus       115 G~~~a~r~i----~v~~~i~~~i~~~~p~a~iin~tNP~--~i~t~~~~~~~~~~~~~  166 (450)
T 3fef_A          115 GIIRGLRAV----PIFAEIARAIRDYAPESWVINYTNPM--SVCTRVLYKVFPGIKAI  166 (450)
T ss_dssp             HHHHHHHHH----HHHHHHHHHHHHHCTTSEEEECCSSH--HHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHCCH----HHHHHHHHHHHHCCCCEEEEEECCCC--HHHHHHHHHHCCCCCEE
T ss_conf             888762228----99999999998319980899824832--78884578658987459


No 221
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=44.95  E-value=14  Score=15.81  Aligned_cols=132  Identities=14%  Similarity=0.220  Sum_probs=81.6

Q ss_pred             CCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC-CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             56505998538743012305111899987640273512620166-33688999999604888505520552035788763
Q gi|254780767|r  191 QWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV-SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCN  269 (383)
Q Consensus       191 ~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd  269 (383)
                      ..+.|.+-||=--. +.+---...+.++.|.++..+.+|-|..+ .-....+.-.+.+.+.+.+++..-++...-+...|
T Consensus        29 ~A~~ViIVPGYGmA-vAqAQ~~v~el~~~L~~~g~~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~emdeIN~~f~~tD  107 (186)
T 2bru_C           29 NSHSVIITPGYGMA-VAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTD  107 (186)
T ss_dssp             HCSEEEEECSBHHH-HTTTHHHHHHHHHHHHHHCCEEEEEECSSSSSSSSTHHHHHHHHTCCTTTEEESCCCHHHHHHCS
T ss_pred             HCCEEEEECCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHCHHHHCCCHHHCC
T ss_conf             38909997784999-99888999999999997798699995235012676305678750799899848554145201268


Q ss_pred             HHHCCCHHHHHHHH--------HHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCC
Q ss_conf             55233115668887--------62753025405774100001024676102302440784261
Q gi|254780767|r  270 AAMAASGTVILELA--------LCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVP  324 (383)
Q Consensus       270 ~ai~~SGTaTLE~a--------l~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivP  324 (383)
                      ++|+.----+.--|        +.|-|.+=+.|..- ...++|-...-|.|..|=+.-++-.-
T Consensus       108 v~lVIGANDvVNPaA~~d~~SpIyGMPvl~v~kak~-Viv~KRsm~~GyaGv~NpLF~~~nt~  169 (186)
T 2bru_C          108 TVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQN-VIVFKRSMNTGYAGVQNPLFFKENTH  169 (186)
T ss_dssp             EEEECBCGGGGCGGGTTSTTSSSTTCCCCCCTTSSE-EEEECSSSCCSSCCCSCTTTBSSSEE
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCE-EEEEECCCCCCCCCCCCCCEECCCCE
T ss_conf             999954777417554689999536883003160778-99997677788678877536748847


No 222
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=44.83  E-value=12  Score=16.08  Aligned_cols=23  Identities=17%  Similarity=0.419  Sum_probs=10.0

Q ss_pred             CCCCEEEE-ECHHHHH-HHHHHHHH
Q ss_conf             28886898-5117765-79999866
Q gi|254780767|r   87 SKPDVLLI-VDNPDFT-HRVAKRVR  109 (383)
Q Consensus        87 ~~Pd~vi~-iD~pgFn-l~lak~lk  109 (383)
                      ++||++++ +.-|+.+ +.+++.+|
T Consensus        53 ~~~dlii~D~~mP~~dG~el~~~ir   77 (140)
T 3c97_A           53 RQFDVIIMDIQMPVMDGLEAVSEIR   77 (140)
T ss_dssp             SCCSEEEECTTCCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf             7998899947999989999999998


No 223
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori SS1}
Probab=44.47  E-value=14  Score=15.76  Aligned_cols=29  Identities=24%  Similarity=0.142  Sum_probs=23.2

Q ss_pred             CCCCEEEEEECCCCHHHH-----HHHHHHHHHHH
Q ss_conf             987459999768214789-----99999999973
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL-----AGDLIKSLKEM   29 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~-----~a~li~~Lk~~   29 (383)
                      +++|||.|++|..|.+.-     |..+.++|+++
T Consensus        18 ~s~mkiaVl~GG~S~Eh~vSl~Sa~~i~~aL~~~   51 (367)
T 2pvp_A           18 GSHMEFCVLFGGASFEHEISIVSAIALKGVLKDR   51 (367)
T ss_dssp             --CCCEEEEEECSSTTHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             9998899990858530187999999999987425


No 224
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver domain, target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=44.35  E-value=14  Score=15.75  Aligned_cols=32  Identities=19%  Similarity=0.490  Sum_probs=12.5

Q ss_pred             CCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEE
Q ss_conf             8886898-5117765-799998663013463111
Q gi|254780767|r   88 KPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        88 ~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~  119 (383)
                      +||++++ +.-||.+ +.+.+.+++..+.+|+|.
T Consensus        49 ~~dlvilD~~mp~~~G~~l~~~~~~~~~~~pvI~   82 (143)
T 3jte_A           49 SIDVVITDMKMPKLSGMDILREIKKITPHMAVII   82 (143)
T ss_dssp             TCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             9739997477777788999999998789996999


No 225
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis atcc 12228}
Probab=44.15  E-value=14  Score=15.73  Aligned_cols=50  Identities=14%  Similarity=0.233  Sum_probs=32.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC--CH-------HHHHCCCEEEECHHH
Q ss_conf             9874599997682147899999999997389983999971--78-------999478806504445
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG--GP-------SLQKEGLVSLFDFSE   57 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG--G~-------~m~~~G~~~~~~~~~   57 (383)
                      |++|||-+++|.+.    ++.|++.|++. +.+  +..|.  |+       .-+..|....+|+..
T Consensus         2 m~~~kIv~lsGGtG----~~~ll~gL~~~-~~~--lt~IVn~~DDggssG~Lr~~~~~~~~gDir~   60 (332)
T 2ppv_A            2 MKQMNVVLIGGGTG----LSVLARGLREF-PID--ITAIVTVADNGGSTGKIRDVMDIPAPGDIRN   60 (332)
T ss_dssp             -CCEEEEEEECHHH----HHHHHHHHTTS-SEE--EEEEECCCCCSHHHHHHHHHSCCCCCHHHHH
T ss_pred             CCCCCEEEECCHHH----HHHHHHHHHHC-CCC--EEEEEECCCCCHHHHHHHHHHCCCCCCCHHH
T ss_conf             97673899868022----89999999758-998--3999989618704678888839999980989


No 226
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative reductase, PSI; 1.28A {Pseudomonas aeruginosa PAO1} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=44.10  E-value=14  Score=15.73  Aligned_cols=35  Identities=11%  Similarity=0.262  Sum_probs=26.1

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             87459999768214789999999999738998399
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINL   36 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~   36 (383)
                      ++|||.++.|-++-+-....|++.+.+..+.+.++
T Consensus         5 ~~MKIl~I~GS~R~~S~t~~l~~~~~~~~~~g~ev   39 (193)
T 1rtt_A            5 DDIKVLGISGSLRSGSYNSAALQEAIGLVPPGMSI   39 (193)
T ss_dssp             --CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEE
T ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf             99779999898998888999999999864699989


No 227
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A*
Probab=43.91  E-value=14  Score=15.71  Aligned_cols=31  Identities=29%  Similarity=0.468  Sum_probs=22.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             4599997682147899999999997389983999971
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |||+| +| +||=+ |+.|+++|.++   +.++.++.
T Consensus         1 MKILI-tG-atGfi-G~~l~~~L~~~---g~~V~~~~   31 (312)
T 3ko8_A            1 MRIVV-TG-GAGFI-GSHLVDKLVEL---GYEVVVVD   31 (312)
T ss_dssp             CEEEE-ET-TTSHH-HHHHHHHHHHT---TCEEEEEC
T ss_pred             CEEEE-EC-CCCHH-HHHHHHHHHHC---CCEEEEEE
T ss_conf             96999-88-88689-99999999978---69899997


No 228
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.84  E-value=14  Score=15.70  Aligned_cols=41  Identities=20%  Similarity=0.348  Sum_probs=27.2

Q ss_pred             CCCC--EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
Q ss_conf             9874--5999976821478999999999973899839999717899
Q gi|254780767|r    1 MNSL--KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSL   44 (383)
Q Consensus         1 m~~m--ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m   44 (383)
                      |+++  |+.+++|-.||  .|..+.+.|-+. +.++-+.+..-+..
T Consensus         1 M~rl~gKvalVTGas~G--IG~aia~~la~~-Ga~V~i~~r~~~~l   43 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNG--IGRATAVLFARE-GAKVTITGRHAERL   43 (278)
T ss_dssp             -CTTTTCEEEETTTTSH--HHHHHHHHHHHT-TCEEEEEESCHHHH
T ss_pred             CCCCCCCEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCHHHH
T ss_conf             95869988999485878--999999999987-99899997988999


No 229
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=43.46  E-value=14  Score=15.66  Aligned_cols=143  Identities=17%  Similarity=0.107  Sum_probs=61.8

Q ss_pred             CEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCC--CCEEEECCCC-CHHHHHHHHHHHCCCC------------------
Q ss_conf             505998538743012305111899987640273--5126201663-3688999999604888------------------
Q gi|254780767|r  193 KKILLLPGSRAQEIYKILPFFESAVASLVKRNP--FFRFSLVTVS-SQENLVRCIVSKWDIS------------------  251 (383)
Q Consensus       193 ~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~--~~~~~i~~~~-~~~~~~~~~~~~~~~~------------------  251 (383)
                      +.|++|.|||...=.    .+.+.++++.+.--  ++..+.-..+ ..-.....-..+.+..                  
T Consensus        14 k~V~VF~gs~~~~~~----~~~~~A~~Lg~~La~~g~~lV~GGG~~GlMga~a~g~~~~gg~viGi~~~~l~~~e~~~~~   89 (215)
T 2a33_A           14 RRICVFCGSSQGKKS----SYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGET   89 (215)
T ss_dssp             SEEEEECCSSCCSSH----HHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEESSCC--------
T ss_pred             CEEEEECCCCCCCCC----HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
T ss_conf             539998867899597----8999999999999987995998997589999999899856995235456545740004766


Q ss_pred             -CEEEEEC---CCCHHHHHHHHHHHCCCH-HHHH-HHH---------HHCCCEEEECCCCCCEE---EEEECCCCCCEEE
Q ss_conf             -5055205---520357887635523311-5668-887---------62753025405774100---0010246761023
Q gi|254780767|r  252 -PEIIIDK---EQKKQVFMTCNAAMAASG-TVIL-ELA---------LCGIPVVSIYKSEWIVN---FFIFYIKTWTCAL  313 (383)
Q Consensus       252 -~~i~~~~---~~~~~~l~~sd~ai~~SG-TaTL-E~a---------l~g~P~IV~Yk~~~lt~---~i~~lik~~~i~L  313 (383)
                       .++....   ..+...+..||+.|+-.| .-|| |+.         ....|.+++..-++-.-   ++..++.-.+++-
T Consensus        90 ~~~~~~~~~~~~Rk~~m~~~sdafIvlPGG~GTLdEl~evltl~qlg~~~kpiilln~~gfw~~l~~~l~~~~~~g~i~~  169 (215)
T 2a33_A           90 VGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISP  169 (215)
T ss_dssp             CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCH
T ss_pred             CCEEEEECCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCH
T ss_conf             66557754899999998873878899188741288899999999808878884898365038999999999998799996


Q ss_pred             EHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf             0244078426124205489899999999984498
Q gi|254780767|r  314 PNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDT  347 (383)
Q Consensus       314 pNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~  347 (383)
                      .        ..+++.---+++++.+.+..+....
T Consensus       170 ~--------~~~~i~v~d~~~e~i~~L~~~~~~~  195 (215)
T 2a33_A          170 T--------AREIIVSAPTAKELVKKLEEYAPCH  195 (215)
T ss_dssp             H--------HHTTEEEESSHHHHHHHHHC-----
T ss_pred             H--------HCCCEEEECCHHHHHHHHHHCCCCC
T ss_conf             9--------8093899399999999999638985


No 230
>3mwf_A Iron-regulated ABC transporter siderophore-bindin SIRA; ABC transporter binding protein, transport protein; HET: SE8; 1.70A {Staphylococcus aureus subsp} PDB: 3mwg_A
Probab=43.42  E-value=14  Score=15.66  Aligned_cols=35  Identities=23%  Similarity=0.347  Sum_probs=23.6

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             8610012888689851177657999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      .+.|.+-+||+||.  +++++-...+.|++.   .|++.+
T Consensus        76 ~E~i~~l~PDlVi~--~~~~~~~~~~~L~~~---~p~v~~  110 (298)
T 3mwf_A           76 LEEISKLKPDLIVA--SKVRNEKVYDQLSKI---APTVST  110 (298)
T ss_dssp             HHHHHHTCCSEEEE--EHHHHGGGHHHHHHH---SCEEEE
T ss_pred             HHHHHCCCCCEEEE--CCCCCHHHHHHHHCC---CCEECC
T ss_conf             99996389985994--176577899985044---853025


No 231
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=43.31  E-value=6.9  Score=17.76  Aligned_cols=20  Identities=15%  Similarity=0.361  Sum_probs=14.3

Q ss_pred             HHHCCCCCCCEEEEECHHHH
Q ss_conf             86100128886898511776
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDF  100 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgF  100 (383)
                      .+.|..-+||+||+.++..-
T Consensus        88 ~E~ilal~PDlIi~~~~~~~  107 (303)
T 3gfv_A           88 FDKVAELDPDLIIISARQSE  107 (303)
T ss_dssp             HHHHHHTCCSEEEECGGGGG
T ss_pred             HHHHHHCCCCEEEEECCCHH
T ss_conf             99997239799999555225


No 232
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa PAO1} PDB: 3i5a_A*
Probab=43.02  E-value=13  Score=16.04  Aligned_cols=38  Identities=24%  Similarity=0.299  Sum_probs=25.6

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHHC--CCCCCEEEE
Q ss_conf             00128886898-5117765-79999866301--346311110
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKKM--PNLPIINYV  121 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~--~~ipvi~yv  121 (383)
                      +.+.+||+||+ +.-||+| +.+.+.+|+..  ..+|+|..-
T Consensus        59 ~~~~~pDlvllD~~mP~~dGlel~~~iR~~~~~~~~pii~lt  100 (358)
T 3bre_A           59 ANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLS  100 (358)
T ss_dssp             HHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEE
T ss_pred             HHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             984499999980888999999999999736455796299963


No 233
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, polymorphism, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=42.74  E-value=15  Score=15.59  Aligned_cols=55  Identities=15%  Similarity=0.121  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC---CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             367466459999999999861001---2888689851177657999986630134631111
Q gi|254780767|r   63 IMQVVRHLPQFIFRINQTVELIVS---SKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        63 ~~evl~~~~~~~~~~~~~~~~i~~---~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +..++.+-..+....+.+.+.+++   .++|.++++++-||-+-.+=..+   .|+|+++.
T Consensus        29 i~~ll~dp~~~~~~~~~l~~~~~~~~~~~~D~Ivgie~~Gi~la~~lA~~---l~~p~v~~   86 (180)
T 1zn8_A           29 ISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQE---LGLGCVLI   86 (180)
T ss_dssp             CHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHH---HTCEEEEE
T ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHH---CCCCEEEE
T ss_conf             84476199999999999999998745678889998256643601688997---29982899


No 234
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=42.73  E-value=15  Score=15.59  Aligned_cols=134  Identities=16%  Similarity=0.222  Sum_probs=82.8

Q ss_pred             CCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC-CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             6505998538743012305111899987640273512620166-336889999996048885055205520357887635
Q gi|254780767|r  192 WKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV-SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNA  270 (383)
Q Consensus       192 ~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~  270 (383)
                      .+.|.+-||=--. +.+---..-+.++.|.++..+.+|-|..+ .-......-.+.+.+.+.+++..-++...-+..+|+
T Consensus        22 A~~ViIVPGYGmA-VAqAQ~~v~el~~~L~~~g~~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~f~~~Dv  100 (184)
T 1d4o_A           22 ANSIIITPGYGLC-AAKAQYPIADLVKMLSEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDL  100 (184)
T ss_dssp             CSEEEEEECHHHH-HTTTHHHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHHTCCGGGEEEHHHHGGGGGGCSE
T ss_pred             CCCEEEECCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHCHHHHCCCCCCCCE
T ss_conf             8909997785998-998899999999999977972799832232347752035675228998998386641453200689


Q ss_pred             HHCCCHHHHHHHH--------HHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHH
Q ss_conf             5233115668887--------62753025405774100001024676102302440784261242
Q gi|254780767|r  271 AMAASGTVILELA--------LCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYF  327 (383)
Q Consensus       271 ai~~SGTaTLE~a--------l~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEli  327 (383)
                      +|+.--.-+.--|        +.|-|.+=+.|..-. ..++|-+..-|.|..|=+.-++-.-=|+
T Consensus       101 ~lVIGANDvVNPaA~~dp~spI~GMPvl~v~kak~V-iv~KRs~~~GyaGv~NpLF~~~nt~Mlf  164 (184)
T 1d4o_A          101 VLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQV-IVMKRSLGVGYAAVDNPIFYKPNTAMLL  164 (184)
T ss_dssp             EEEESCSGGGCTHHHHCTTSTTTTCCCCCGGGSSCE-EEEESSSCCCTTCCCCGGGGSTTEEEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEE-EEEECCCCCCCCCCCCCCEECCCCEEEE
T ss_conf             999546555584324799996557835682028889-9996788788577867335548837994


No 235
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=42.59  E-value=12  Score=16.29  Aligned_cols=27  Identities=11%  Similarity=-0.032  Sum_probs=14.6

Q ss_pred             CCCCEEEEHHHCCCCCCCHHHCC-CCCHH
Q ss_conf             67610230244078426124205-48989
Q gi|254780767|r  307 KTWTCALPNLIVDYPLVPEYFNS-MIRSE  334 (383)
Q Consensus       307 k~~~i~LpNii~~~~ivPEliQ~-~~~~~  334 (383)
                      ...|+|+|=+|-.+.+. +.+.- +.+++
T Consensus       260 ~~~~~s~P~~ig~~Gv~-~i~~l~~L~~~  287 (314)
T 1mld_A          260 DCPYFSTPLLLGKKGIE-KNLGIGKISPF  287 (314)
T ss_dssp             SSSEEEEEEEEETTEEE-EECCCCSCCHH
T ss_pred             CCEEEEEEEEEECCEEE-EECCCCCCCHH
T ss_conf             87899998899389589-98178999999


No 236
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=42.52  E-value=15  Score=15.57  Aligned_cols=103  Identities=10%  Similarity=0.109  Sum_probs=60.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      -|++|+....+    |..++++|++  +++.++.|+-.+.-...|-.    +..+.|.|.              +++.+.
T Consensus         5 ~rvlI~Gag~~----g~~l~~~l~~--~~~y~vvgfiD~d~~~~g~~----i~gi~V~~~--------------~~l~~~   60 (141)
T 3nkl_A            5 KKVLIYGAGSA----GLQLANMLRQ--GKEFHPIAFIDDDRKKHKTT----MQGITIYRP--------------KYLERL   60 (141)
T ss_dssp             EEEEEECCSHH----HHHHHHHHHH--SSSEEEEEEECSCGGGTTCE----ETTEEEECG--------------GGHHHH
T ss_pred             CEEEEECCCHH----HHHHHHHHHH--CCCCEEEEEEECCCCCCEEE----ECCCCCCCH--------------HHHHHH
T ss_conf             77999877989----9999999987--89966999995786414148----678203668--------------787788


Q ss_pred             CCCCCCCEEEEEC--HHHHH-HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHH
Q ss_conf             0012888689851--17765-799998663013463111100221100366355
Q gi|254780767|r   84 IVSSKPDVLLIVD--NPDFT-HRVAKRVRKKMPNLPIINYVCPSVWAWREGRAR  134 (383)
Q Consensus        84 i~~~~Pd~vi~iD--~pgFn-l~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k  134 (383)
                      +++++.|.|++..  .+... .++...+.+.  ++.  .++-|.++-|-.++..
T Consensus        61 i~~~~i~~viia~p~~~~~~~~~l~~~~~~~--~i~--i~~vP~~~~~~~~~~~  110 (141)
T 3nkl_A           61 IKKHCISTVLLAVPSASQVQKKVIIESLAKL--HVE--VLTIPNLDDLVNGKLS  110 (141)
T ss_dssp             HHHHTCCEEEECCTTSCHHHHHHHHHHHHTT--TCE--EEECCCHHHHHTTSSC
T ss_pred             HHHCCCCEEEEECCCCCHHHHHHHHHHHHCC--CCC--EEECCCHHHHHCCCCC
T ss_conf             8646863899945888999999999987505--972--3777888887349836


No 237
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=42.49  E-value=15  Score=15.57  Aligned_cols=31  Identities=10%  Similarity=0.216  Sum_probs=22.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             4599997682147899999999997389983999971
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |||+|..|-   -..|+.|++.|.++   +.++.|+-
T Consensus         1 MkILItGat---GfiG~~lv~~Ll~~---g~~V~~~d   31 (338)
T 1udb_A            1 MRVLVTGGS---GYIGSHTCVQLLQN---GHDVIILD   31 (338)
T ss_dssp             CEEEEETTT---SHHHHHHHHHHHHT---TCEEEEEE
T ss_pred             CEEEEECCC---CHHHHHHHHHHHHC---CCEEEEEE
T ss_conf             969998988---78999999999978---49899997


No 238
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=42.49  E-value=13  Score=16.01  Aligned_cols=12  Identities=8%  Similarity=0.481  Sum_probs=6.1

Q ss_pred             HCCCCCCCEEEE
Q ss_conf             100128886898
Q gi|254780767|r   83 LIVSSKPDVLLI   94 (383)
Q Consensus        83 ~i~~~~Pd~vi~   94 (383)
                      .+...+||+||-
T Consensus        81 ~l~~~~pDLVvS   92 (247)
T 1j9j_A           81 VVMDKRVDLIVS   92 (247)
T ss_dssp             TTSTTCCSEEEE
T ss_pred             CCCCCCCCEEEE
T ss_conf             546999888996


No 239
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=42.41  E-value=15  Score=15.56  Aligned_cols=87  Identities=20%  Similarity=0.219  Sum_probs=46.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             59999768214789999999999738998399997178999478806504445311013674664599999999998610
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELI   84 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i   84 (383)
                      |.++++|+.+-+..+..+.+.|.+. +-.+++..+.|+        +                 .+    ....++.+..
T Consensus        33 r~lvv~d~~~~~~~~~~v~~~L~~~-~i~~~~~~~~~~--------~-----------------t~----~~v~~~~~~~   82 (370)
T 1jq5_A           33 KTVVIADEIVWKIAGHTIVNELKKG-NIAAEEVVFSGE--------A-----------------SR----NEVERIANIA   82 (370)
T ss_dssp             EEEEEECHHHHHHTHHHHHHHHHTT-TCEEEEEECCSS--------C-----------------BH----HHHHHHHHHH
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHC-CCEEEEEEECCC--------C-----------------CH----HHHHHHHHHH
T ss_conf             5999989768899999999999877-996999995999--------9-----------------99----9999999997


Q ss_pred             CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf             01288868985117765799998663013463111100221
Q gi|254780767|r   85 VSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSV  125 (383)
Q Consensus        85 ~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~Pqv  125 (383)
                      +..++|++|.|= .|=-+-+||.+--. .++|++..  |+.
T Consensus        83 ~~~~~D~IvavG-GGs~~D~aK~~A~~-~~~p~i~I--PTt  119 (370)
T 1jq5_A           83 RKAEAAIVIGVG-GGKTLDTAKAVADE-LDAYIVIV--PTA  119 (370)
T ss_dssp             HHTTCSEEEEEE-SHHHHHHHHHHHHH-HTCEEEEE--ESS
T ss_pred             HHCCCCEEEECC-CCCCCCHHHHHHCC-CCCCEEEE--CCC
T ss_conf             604887899737-86302012122101-46632552--364


No 240
>1zgz_A Torcad operon transcriptional regulatory protein TORR; two-component system, gene regulation, transcription factor, TMAO respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=42.38  E-value=15  Score=15.56  Aligned_cols=34  Identities=21%  Similarity=0.423  Sum_probs=20.1

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEE
Q ss_conf             128886898-5117765-7999986630134631111
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~y  120 (383)
                      +++||++|+ +.-||.| +.+.+.+|+. ..+|++-.
T Consensus        44 ~~~~dliilD~~mP~~dG~e~~~~~r~~-~~~piI~l   79 (122)
T 1zgz_A           44 NQSVDLILLDINLPDENGLMLTRALRER-STVGIILV   79 (122)
T ss_dssp             HSCCSEEEEESCCSSSCHHHHHHHHHTT-CCCEEEEE
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHC-CCCCEEEE
T ss_conf             3999899997898997728999999847-99939999


No 241
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=42.22  E-value=15  Score=15.54  Aligned_cols=204  Identities=14%  Similarity=0.085  Sum_probs=90.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEE--CHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650--4445311013674664599999999998
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLF--DFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~--~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      .++-++..+.|...+. .+.+.+++.              .++.|.+..+  .-.+-+              .....+..
T Consensus         2 ~~~avi~~~~~npf~~-~~~~g~~~~--------------a~~~G~~~~~~~~~~~~d--------------~~~q~~~i   52 (288)
T 1gud_A            2 AEYAVVLKTLSNPFWV-DMKKGIEDE--------------AKTLGVSVDIFASPSEGD--------------FQSQLQLF   52 (288)
T ss_dssp             CEEEEEESCSSSHHHH-HHHHHHHHH--------------HHHHTCCEEEEECSSTTC--------------HHHHHHHH
T ss_pred             CEEEEEECCCCCHHHH-HHHHHHHHH--------------HHHCCCEEEEEECCCCCC--------------HHHHHHHH
T ss_conf             6799997989888999-999999999--------------997499799997589899--------------99999999


Q ss_pred             HHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEECC----CCCCCCCCCH--------HHHHHHHHHHCCCC
Q ss_conf             61001288868985--1177657999986630134631111002----2110036635--------57999998640156
Q gi|254780767|r   82 ELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVCP----SVWAWREGRA--------RKMCAYINQVISIL  147 (383)
Q Consensus        82 ~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~P----qvWAWr~~R~--------k~~~~~~d~~~~if  147 (383)
                      +.+...+||.+|+.  |.......+. +++++  |||++.+-.+    ..+.....+.        ..-....++++.  
T Consensus        53 ~~~i~~~~Dgii~~~~~~~~~~~~~~-~~~~~--~Ipvv~~~~~~~~~~~~~~~~~~~~~v~~d~~~~g~~~~~~l~~--  127 (288)
T 1gud_A           53 EDLSNKNYKGIAFAPLSSVNLVMPVA-RAWKK--GIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIID--  127 (288)
T ss_dssp             HHHHTSSEEEEEECCSSSSTTHHHHH-HHHHT--TCEEEEESSCCCHHHHHHTTCCCSEEEECCHHHHHHHHHHHHHH--
T ss_pred             HHHHHCCCCEEEEECCCCCCCHHHHH-HHHHC--CCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH--
T ss_conf             99996599989973356411179999-99858--98499935777754333456870269924789999999999999--


Q ss_pred             CCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf             77422320025531476388211221001355888976187655650599853874301230511189998764027351
Q gi|254780767|r  148 PFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFF  227 (383)
Q Consensus       148 pFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~  227 (383)
                          ....+ .+ .+.++.++-... ........+.+.....++...+....|....|-..      +.++.+...+|++
T Consensus       128 ----~~~~~-~~-~v~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  194 (288)
T 1gud_A          128 ----KLGAE-GG-EVAIIEGKAGNA-SGEARRNGATEAFKKASQIKLVASQPADWDRIKAL------DVATNVLQRNPNI  194 (288)
T ss_dssp             ----HHGGG-CE-EEEEEECSTTCH-HHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHH------HHHHHHHHHCTTC
T ss_pred             ----HCCCC-CC-EEEEECCCCCCC-HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH------HHHHHHHHCCCCC
T ss_conf             ----63888-76-698624884320-37899871677765134531001112312468999------9999887419986


Q ss_pred             EEEECCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             262016633688999999604888505
Q gi|254780767|r  228 RFSLVTVSSQENLVRCIVSKWDISPEI  254 (383)
Q Consensus       228 ~~~i~~~~~~~~~~~~~~~~~~~~~~i  254 (383)
                      ..++......-.-.-..+.+.+.+.++
T Consensus       195 ~~i~~~~d~~a~g~~~al~~~g~~~dv  221 (288)
T 1gud_A          195 KAIYCANDTMAMGVAQAVANAGKTGKV  221 (288)
T ss_dssp             CEEEESSHHHHHHHHHHHHHTTCTTTS
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCCCE
T ss_conf             057535988999999999976999984


No 242
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D domain swapping; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=42.03  E-value=15  Score=15.52  Aligned_cols=78  Identities=19%  Similarity=0.286  Sum_probs=41.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |.+ +|+++--|+   ..+..|...|+..   ++++.......                                   +.
T Consensus         3 M~~-~ILlVeDd~---~~~~~l~~~L~~~---g~~v~~a~~~~-----------------------------------~a   40 (230)
T 2oqr_A            3 MAT-SVLIVEDEE---SLADPLAFLLRKE---GFEATVVTDGP-----------------------------------AA   40 (230)
T ss_dssp             -CC-EEEEECSCH---HHHHHHHHHHHHT---TCEEEEECSHH-----------------------------------HH
T ss_pred             CCC-EEEEEECCH---HHHHHHHHHHHHC---CCEEEEECCHH-----------------------------------HH
T ss_conf             998-399996999---9999999999987---99999989999-----------------------------------99


Q ss_pred             HHHCCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             86100128886898-5117765-79999866301346311110
Q gi|254780767|r   81 VELIVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      .+.+..+.||++|+ +..|+.+ ..+.+..++ ...+|++..-
T Consensus        41 l~~~~~~~~DliilDi~lp~~~g~~~~~~~~~-~~~~pii~lt   82 (230)
T 2oqr_A           41 LAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA-RSSVPVIMVT   82 (230)
T ss_dssp             HHHHHHHCCSEEEEESSCSSSCHHHHHHHHHH-HCSCSEEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC-CCCEEEEEEE
T ss_conf             99997489989999489999888742023224-5640799982


No 243
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=42.02  E-value=9.5  Score=16.87  Aligned_cols=17  Identities=18%  Similarity=0.063  Sum_probs=10.9

Q ss_pred             HCCCCCHHHHHHHHHHH
Q ss_conf             20548989999999998
Q gi|254780767|r  327 FNSMIRSEALVRWIERL  343 (383)
Q Consensus       327 iQ~~~~~~~i~~~~~~l  343 (383)
                      +.++.|++.+...+..+
T Consensus       243 I~~~dt~~~l~~k~~~~  259 (288)
T 3obi_A          243 ISHRDTPADLVRKGRDI  259 (288)
T ss_dssp             CCTTCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHH
T ss_conf             69999999999999999


No 244
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=41.95  E-value=15  Score=15.51  Aligned_cols=18  Identities=22%  Similarity=0.473  Sum_probs=12.9

Q ss_pred             HHHHHHHCCCEEEECCCC
Q ss_conf             688876275302540577
Q gi|254780767|r  279 ILELALCGIPVVSIYKSE  296 (383)
Q Consensus       279 TLE~al~g~P~IV~Yk~~  296 (383)
                      -.||..+++|.|-+-.++
T Consensus       173 i~Ea~~l~IPvI~ivDtn  190 (231)
T 3bbn_B          173 LRECITLGIPTICLIDTN  190 (231)
T ss_dssp             HHHHHTTTCCEEECCCSS
T ss_pred             HHHHHHCCCCEEEEECCC
T ss_conf             999997399878874389


No 245
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=41.83  E-value=15  Score=15.50  Aligned_cols=89  Identities=19%  Similarity=0.231  Sum_probs=50.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      |||-|+....-|..|    +++|++.  +++++.|+..+.-+.+  +.+.+  +++..-..             ... +.
T Consensus         2 ~kigiIG~G~~~~~~----~~~l~~~--~~~~lvav~d~~~~~~--~~~a~--~~~~~~~~-------------~~~-e~   57 (325)
T 2ho3_A            2 LKLGVIGTGAISHHF----IEAAHTS--GEYQLVAIYSRKLETA--ATFAS--RYQNIQLF-------------DQL-EV   57 (325)
T ss_dssp             EEEEEECCSHHHHHH----HHHHHHT--TSEEEEEEECSSHHHH--HHHGG--GSSSCEEE-------------SCH-HH
T ss_pred             CEEEEECCCHHHHHH----HHHHHHC--CCEEEEEEECCCHHHH--HHHHH--HCCCCCCC-------------CHH-HH
T ss_conf             599999983999999----9999868--8908999988999999--99999--84998356-------------859-99


Q ss_pred             CCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             00128886898511776579999866301346311
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.++|+|+..--|.+|..+++.+=+.  |++|+
T Consensus        58 l~~~~iD~V~I~tp~~~H~~~~~~al~~--gkhV~   90 (325)
T 2ho3_A           58 FFKSSFDLVYIASPNSLHFAQAKAALSA--GKHVI   90 (325)
T ss_dssp             HHTSSCSEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             HHCCCCCEEEEECCCCHHHHHHHHHHHC--CCCHH
T ss_conf             7189998999958960315999999863--45122


No 246
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=41.74  E-value=14  Score=15.76  Aligned_cols=10  Identities=20%  Similarity=0.175  Sum_probs=3.9

Q ss_pred             EEEECCCCHH
Q ss_conf             9997682147
Q gi|254780767|r    7 AVIAGEISGD   16 (383)
Q Consensus         7 ~i~aGE~SGD   16 (383)
                      |+.+|-++=|
T Consensus        23 yi~aG~P~~~   32 (262)
T 1rd5_A           23 YITAGDPDLA   32 (262)
T ss_dssp             EEETTSSCHH
T ss_pred             EEECCCCCHH
T ss_conf             9727789978


No 247
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=41.68  E-value=15  Score=15.49  Aligned_cols=35  Identities=17%  Similarity=0.387  Sum_probs=22.2

Q ss_pred             CCCCCEEEE-ECHH-HHH-HHHHHHHHHHCCCCCCEEEE
Q ss_conf             128886898-5117-765-79999866301346311110
Q gi|254780767|r   86 SSKPDVLLI-VDNP-DFT-HRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        86 ~~~Pd~vi~-iD~p-gFn-l~lak~lkk~~~~ipvi~yv  121 (383)
                      ...||++++ +.-| |++ +.+++.+++. +.+|+|-+-
T Consensus        48 ~~~~dlillD~~mp~g~dG~e~~~~ir~~-~~~PvI~lT   85 (140)
T 3h5i_A           48 GWYPDLILMDIELGEGMDGVQTALAIQQI-SELPVVFLT   85 (140)
T ss_dssp             TCCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEEEEE
T ss_pred             CCCCCEEEEECCCCCCCCHHHHHHHHHHC-CCCCEEEEE
T ss_conf             69998999726653357899999999856-999899998


No 248
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=41.66  E-value=4.7  Score=18.84  Aligned_cols=27  Identities=30%  Similarity=0.601  Sum_probs=22.6

Q ss_pred             CC-CC-EEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             98-74-59999768214789999999999
Q gi|254780767|r    1 MN-SL-KIAVIAGEISGDLLAGDLIKSLK   27 (383)
Q Consensus         1 m~-~m-ki~i~aGE~SGD~~~a~li~~Lk   27 (383)
                      || +| ||.|+.|.++|=+-|+.|.+.++
T Consensus         1 M~~~i~~IvIVGgGtAGw~tAa~Lar~~~   29 (538)
T 2aqj_A            1 MNKPIKNIVIVGGGTAGWMAASYLVRALQ   29 (538)
T ss_dssp             -CCBCCEEEEECCSHHHHHHHHHHHHHCC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf             99987579998987899999999998708


No 249
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=41.25  E-value=16  Score=15.44  Aligned_cols=32  Identities=25%  Similarity=0.234  Sum_probs=16.1

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             99997682147899999999997389983999971
Q gi|254780767|r    6 IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         6 i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |.+....+||=.+|.+|++.|++.   +.++.-+-
T Consensus         4 I~lgITGasga~~a~~l~~~L~k~---g~~V~vv~   35 (189)
T 2ejb_A            4 IALCITGASGVIYGIKLLQVLEEL---DFSVDLVI   35 (189)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHHT---TCEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHHHHC---CCEEEEEE
T ss_conf             999974289999999999999978---99799996


No 250
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/beta protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=41.21  E-value=14  Score=15.84  Aligned_cols=33  Identities=15%  Similarity=0.179  Sum_probs=16.3

Q ss_pred             CCCCCEEEEECHHHHHH---------HHHHHHHHHCCCCCCE
Q ss_conf             12888689851177657---------9999866301346311
Q gi|254780767|r   86 SSKPDVLLIVDNPDFTH---------RVAKRVRKKMPNLPII  118 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFnl---------~lak~lkk~~~~ipvi  118 (383)
                      ..+||+||-==..|.|+         -++..+-....|||=|
T Consensus        82 ~~~pDlVvSGIN~G~N~g~dv~~sSGTVgAA~Ea~~~GipaI  123 (280)
T 1l5x_A           82 GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAL  123 (280)
T ss_dssp             TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEE
T ss_pred             CCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCE
T ss_conf             899878996676765478105755588999999998199833


No 251
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=41.13  E-value=16  Score=15.43  Aligned_cols=94  Identities=19%  Similarity=0.165  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHCCCC--EEEEEECCHHHH-------HCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4789999999999738998--399997178999-------4788065044453110136746645999999999986100
Q gi|254780767|r   15 GDLLAGDLIKSLKEMVSYP--INLVGVGGPSLQ-------KEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIV   85 (383)
Q Consensus        15 GD~~~a~li~~Lk~~~~~~--~~~~giGG~~m~-------~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~   85 (383)
                      -|.+|-...-.||++.+.+  +....+|++.-+       +-|.+.-+.+++-..-|.- .+       ...+-+.+.++
T Consensus        38 ~D~~AlE~Al~lkE~~g~~~~Vt~ls~Gp~~a~~~Lr~alAmGaD~av~v~d~~~~~~d-~~-------atA~~LA~~i~  109 (264)
T 1o97_C           38 WDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSD-AI-------VVGRILTEVIK  109 (264)
T ss_dssp             HHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHHTTCSEEEEECCGGGTTCC-HH-------HHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-HH-------HHHHHHHHHHH
T ss_conf             67999999999984479956999998150888999999997279726999605777878-99-------99999999997


Q ss_pred             CCCCCEEEE----ECHH--HHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             128886898----5117--76579999866301346311110
Q gi|254780767|r   86 SSKPDVLLI----VDNP--DFTHRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        86 ~~~Pd~vi~----iD~p--gFnl~lak~lkk~~~~ipvi~yv  121 (383)
                      +..||+|++    +|.-  -.--.+|..|     |+|.+-||
T Consensus       110 ~~~~DLIl~G~qs~D~~tgqvg~~lAe~L-----g~p~vt~v  146 (264)
T 1o97_C          110 KEAPDMVFAGVQSSDQAYASTGISVASYL-----NWPHAAVV  146 (264)
T ss_dssp             HHCCSEEEEESCCTTTCCCCHHHHHHHHH-----TCCEEEEE
T ss_pred             HCCCCEEEEECCCCCCCCCCHHHHHHHHH-----CCCCEEEE
T ss_conf             43999999914346999883428999981-----99815678


No 252
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=40.95  E-value=16  Score=15.41  Aligned_cols=31  Identities=13%  Similarity=0.253  Sum_probs=14.1

Q ss_pred             CCCEEEEECHHHHH---HHHHHHHHHHCCCCCCEEE
Q ss_conf             88868985117765---7999986630134631111
Q gi|254780767|r   88 KPDVLLIVDNPDFT---HRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        88 ~Pd~vi~iD~pgFn---l~lak~lkk~~~~ipvi~y  120 (383)
                      +=|++|++.+.|=+   +..++.+|++  |++++-.
T Consensus       116 ~gDvli~iS~SG~s~~ii~a~~~Ak~~--g~~~iai  149 (198)
T 2xbl_A          116 EGDVLIGYSTSGKSPNILAAFREAKAK--GMTCVGF  149 (198)
T ss_dssp             TTCEEEEECSSSCCHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHC--CCEEEEE
T ss_conf             999899970899976899999999985--9989999


No 253
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=40.62  E-value=16  Score=15.38  Aligned_cols=89  Identities=15%  Similarity=0.095  Sum_probs=51.3

Q ss_pred             CCCCEEEEEECCCCHH-HHHHHHHHHHHHHCCCCEEEEEECCHH---HHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHH
Q ss_conf             9874599997682147-899999999997389983999971789---994788065044453110136746645999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGD-LLAGDLIKSLKEMVSYPINLVGVGGPS---LQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFR   76 (383)
Q Consensus         1 m~~mki~i~aGE~SGD-~~~a~li~~Lk~~~~~~~~~~giGG~~---m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~   76 (383)
                      |+ .||-|+.....|. .|.    .+++.  .+++++.|+....   .+++.      .+...+-              .
T Consensus         1 M~-irvgiIG~G~~~~~~h~----~~~~~--~~~~~lvav~d~~~~~~~~~~------~~~~~~~--------------~   53 (349)
T 3i23_A            1 MT-VKMGFIGFGKSANRYHL----PYVMI--RETLEVKTIFDLHVNEKAAAP------FKEKGVN--------------F   53 (349)
T ss_dssp             CC-EEEEEECCSHHHHHTTH----HHHTT--CTTEEEEEEECTTCCHHHHHH------HHTTTCE--------------E
T ss_pred             CC-EEEEEECCCHHHHHHHH----HHHHC--CCCCEEEEEEECCHHHHHHHH------HHCCCCC--------------E
T ss_conf             95-05999988099999999----99961--989789999909999999997------5538993--------------5


Q ss_pred             HHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             999986100128886898511776579999866301346311
Q gi|254780767|r   77 INQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        77 ~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +....+.+.+.+||+|+..--|.++..++.++=+.  |++|+
T Consensus        54 ~~~~~ell~~~~iD~V~i~tp~~~H~~~~~~al~a--gkhV~   93 (349)
T 3i23_A           54 TADLNELLTDPEIELITICTPAHTHYDLAKQAILA--GKSVI   93 (349)
T ss_dssp             ESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHT--TCEEE
T ss_pred             ECCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHC--CCEEE
T ss_conf             79999996599988899888714567889999984--99187


No 254
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=40.42  E-value=13  Score=15.91  Aligned_cols=38  Identities=21%  Similarity=0.479  Sum_probs=25.6

Q ss_pred             CCCCCCCEEEE-ECHHHHH-HHHHHHHHHHCCCCCCEEEEC
Q ss_conf             00128886898-5117765-799998663013463111100
Q gi|254780767|r   84 IVSSKPDVLLI-VDNPDFT-HRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        84 i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~~~~ipvi~yv~  122 (383)
                      +..++||++|+ ++.||.+ +.+.+++++. ...|+|...+
T Consensus        45 ~~~~~~DliilD~~lp~~~g~~~~~~~r~~-~~~~iIilt~   84 (238)
T 2gwr_A           45 VRELRPDLVLLDLMLPGMNGIDVCRVLRAD-SGVPIVMLTA   84 (238)
T ss_dssp             HHHHCCSEEEEESSCSSSCHHHHHHHHHTT-CCCCEEEEEE
T ss_pred             HHHCCCCEEEEECCCCCCCCCCEEECCCCC-CCCCCCCCCC
T ss_conf             983799999991677666887123112235-6653110125


No 255
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural genomics, PSI; 2.01A {Pseudomonas aeruginosa}
Probab=40.15  E-value=16  Score=15.33  Aligned_cols=104  Identities=18%  Similarity=0.188  Sum_probs=58.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHH-HHHHHHCCCCEEEEEECCHHHH-----HCCCEEEE-CHH------------HCCEE
Q ss_conf             98745999976821478999999-9999738998399997178999-----47880650-444------------53110
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLI-KSLKEMVSYPINLVGVGGPSLQ-----KEGLVSLF-DFS------------ELSVI   61 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li-~~Lk~~~~~~~~~~giGG~~m~-----~~G~~~~~-~~~------------~l~v~   61 (383)
                      |+. ||.|+.||++|=  |..++ +++++.  ...++.-+|.+..-     ..|...-+ .++            .+.+.
T Consensus         1 M~~-kIaIT~GDPaGI--GpEIilka~~~~--~~~~~vvig~~~~l~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~v~   75 (328)
T 1yxo_A            1 MSL-RFALTPGEPAGI--GPDLCLLLARSA--QPHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVW   75 (328)
T ss_dssp             CCC-CEEEECCSTTSS--HHHHHHHHTTSC--CSSCEEEEECHHHHHHHHHHHTCCCEEEECBTTBCCSSCCCTTEEEEE
T ss_pred             CCC-EEEEECCCCCHH--HHHHHHHHHHHC--CCCCEEEEECHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCEEEEE
T ss_conf             996-099988987446--899999999717--999989998999999999984999851366813323302678856785


Q ss_pred             EH--------HHH-HHHHHHHHHHHHHHHHHCCCCCCCEEEE------------ECHHHHHHHHHHHHH
Q ss_conf             13--------674-6645999999999986100128886898------------511776579999866
Q gi|254780767|r   62 GI--------MQV-VRHLPQFIFRINQTVELIVSSKPDVLLI------------VDNPDFTHRVAKRVR  109 (383)
Q Consensus        62 G~--------~ev-l~~~~~~~~~~~~~~~~i~~~~Pd~vi~------------iD~pgFnl~lak~lk  109 (383)
                      -.        .++ -.+-......++...+.+++.+-|++|+            ..|||..--+|++..
T Consensus        76 ~~~~~~~~~~G~~~~~~g~~~~~~l~~Av~~~~~g~~~alVT~PInK~~i~~aG~~f~GHTE~la~~~~  144 (328)
T 1yxo_A           76 DTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTH  144 (328)
T ss_dssp             ECCCSSCCCTTCCCGGGHHHHHHHHHHHHHHHHTTSCSEEEECCCCHHHHHHTTCCCCCHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCEEHHHHHHHC
T ss_conf             364456778897498999999999999999997197543660782789998679984866598776504


No 256
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=39.96  E-value=13  Score=15.88  Aligned_cols=60  Identities=25%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      |||+|.. - || ..|+.|++.|.+. +   +..++.-..     -+...|+.+            .       +.+.+.
T Consensus         1 MKILItG-~-tG-fIG~~l~~~L~~~-g---~~v~~~~~~-----~~~~~Dl~d------------~-------~~~~~~   49 (299)
T 1n2s_A            1 MNILLFG-K-TG-QVGWELQRSLAPV-G---NLIALDVHS-----KEFCGDFSN------------P-------KGVAET   49 (299)
T ss_dssp             CEEEEEC-T-TS-HHHHHHHHHTTTT-S---EEEEECTTC-----SSSCCCTTC------------H-------HHHHHH
T ss_pred             CEEEEEC-C-CC-HHHHHHHHHHHHC-C---CEEEEECCC-----CCCCCCCCC------------H-------HHHHHH
T ss_conf             9699989-9-98-8999999999868-9---999997898-----543176889------------9-------999999


Q ss_pred             CCCCCCCEEEE
Q ss_conf             00128886898
Q gi|254780767|r   84 IVSSKPDVLLI   94 (383)
Q Consensus        84 i~~~~Pd~vi~   94 (383)
                      ++..+||+||-
T Consensus        50 l~~~kpD~Vih   60 (299)
T 1n2s_A           50 VRKLRPDVIVN   60 (299)
T ss_dssp             HHHHCCSEEEE
T ss_pred             HHHCCCCEEEE
T ss_conf             99759989997


No 257
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, DNA-binding protein; 3.10A {Cauliflower mosaic virus}
Probab=39.79  E-value=16  Score=15.30  Aligned_cols=27  Identities=19%  Similarity=0.251  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             674664599999999998610012888
Q gi|254780767|r   64 MQVVRHLPQFIFRINQTVELIVSSKPD   90 (383)
Q Consensus        64 ~evl~~~~~~~~~~~~~~~~i~~~~Pd   90 (383)
                      .|++.....+.+-++++.+.+.+.+|+
T Consensus        12 ~~~l~~~k~l~~di~~il~~~~S~~~~   38 (129)
T 3f6n_A           12 SEILSDQKSMKADIKAILELLGSQNPI   38 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             999999999999999999742799720


No 258
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.62  E-value=16  Score=15.28  Aligned_cols=84  Identities=10%  Similarity=0.008  Sum_probs=46.8

Q ss_pred             CCCEEEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             874599997-6821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    2 NSLKIAVIA-GEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         2 ~~mki~i~a-GE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      +.|||+++| |..|.-+.+.++-++.+++ +.++++..++=.+.++.       .++..+      +.==|.+...++++
T Consensus         5 k~~kIlL~C~~GmSSsll~~km~~~a~~~-~~~~~v~A~~~~~~~~~-------~~~~Dv------iLL~PQv~~~~~~i   70 (108)
T 3nbm_A            5 KELKVLVLCAGSGTSAQLANAINEGANLT-EVRVIANSGAYGAHYDI-------MGVYDL------IILAPQVRSYYREM   70 (108)
T ss_dssp             CCEEEEEEESSSSHHHHHHHHHHHHHHHH-TCSEEEEEEETTSCTTT-------GGGCSE------EEECGGGGGGHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEEEHHHHHHH-------HHCCCE------EEECHHHHHHHHHH
T ss_conf             63469999799975999999999999976-99789999538999988-------642899------99866799999999


Q ss_pred             HHHCCCCCCCEEEEECHHHH
Q ss_conf             86100128886898511776
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDF  100 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgF  100 (383)
                      .+...+..- -+..||..++
T Consensus        71 ~~~~~~~~i-pv~~I~~~~Y   89 (108)
T 3nbm_A           71 KVDAERLGI-QIVATRGMEY   89 (108)
T ss_dssp             HHHHTTTTC-EEEECCHHHH
T ss_pred             HHHHHHCCC-CEEEECHHHH
T ss_conf             999877399-2887287874


No 259
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=39.18  E-value=17  Score=15.24  Aligned_cols=36  Identities=11%  Similarity=0.002  Sum_probs=22.2

Q ss_pred             CCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             00128886898511776579999866301346311110
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv  121 (383)
                      +...+.+.+|+--+.+-...++..+.+.  ++|.+...
T Consensus        65 li~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~  100 (346)
T 1usg_A           65 IVNDGIKYVIGHLCSSSTQPASDIYEDE--GILMISPG  100 (346)
T ss_dssp             HHHTTCCEEECCSSHHHHHHHHHHHHHH--TCEEEECC
T ss_pred             HHHCCCCEEECCCCCCCHHHCCHHHHHC--CCCCCCCC
T ss_conf             9976991787786662033200245406--86422576


No 260
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=38.69  E-value=17  Score=15.19  Aligned_cols=87  Identities=14%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH-----HCCCEEEECHHHCCEEEHHHHHHHHHHHHH
Q ss_conf             987459999768214789999999999738998399997178999-----478806504445311013674664599999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQ-----KEGLVSLFDFSELSVIGIMQVVRHLPQFIF   75 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~-----~~G~~~~~~~~~l~v~G~~evl~~~~~~~~   75 (383)
                      |+. ||.|+.+   |-+ |..+.+.|.+. + ++++..++-+.-+     ..+....    ..      + +..      
T Consensus         4 m~~-kI~ViGa---G~v-G~~va~~L~~~-~-~~~v~~~dr~~~~~~~~~~~~~~~~----~~------d-~~d------   59 (118)
T 3ic5_A            4 MRW-NICVVGA---GKI-GQMIAALLKTS-S-NYSVTVADHDLAALAVLNRMGVATK----QV------D-AKD------   59 (118)
T ss_dssp             TCE-EEEEECC---SHH-HHHHHHHHHHC-S-SEEEEEEESCHHHHHHHHTTTCEEE----EC------C-TTC------
T ss_pred             CCC-CEEEECC---CHH-HHHHHHHHHHC-C-CCCEEEECCCHHHHHHCCCCCCCCC----CC------C-CCC------
T ss_conf             607-8899867---999-99999999878-9-9847861265666410001222211----12------4-489------


Q ss_pred             HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99999861001288868985117765799998663013463
Q gi|254780767|r   76 RINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLP  116 (383)
Q Consensus        76 ~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ip  116 (383)
                       ...+.+.+  .+.|+|+..-.+.++..+++.+-+.  |++
T Consensus        60 -~~~l~~~l--~~~DvVi~~~p~~~~~~ia~aa~~~--g~~   95 (118)
T 3ic5_A           60 -EAGLAKAL--GGFDAVISAAPFFLTPIIAKAAKAA--GAH   95 (118)
T ss_dssp             -HHHHHHHT--TTCSEEEECSCGGGHHHHHHHHHHT--TCE
T ss_pred             -HHHHHHHH--CCCCEEEECCCCCCCHHHHHHHHHH--CCC
T ss_conf             -99999998--5998999837830459999999990--999


No 261
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=38.54  E-value=17  Score=15.17  Aligned_cols=24  Identities=29%  Similarity=0.508  Sum_probs=14.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             9874599997682147899999999997
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKE   28 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~   28 (383)
                      |++.||-|+ |  .|+ .|+.+.-.|..
T Consensus         3 m~~~KI~Ii-G--aG~-VG~~~a~~l~~   26 (321)
T 3p7m_A            3 MARKKITLV-G--AGN-IGGTLAHLALI   26 (321)
T ss_dssp             CCCCEEEEE-C--CSH-HHHHHHHHHHH
T ss_pred             CCCCEEEEE-C--CCH-HHHHHHHHHHH
T ss_conf             888879999-9--898-99999999982


No 262
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=38.11  E-value=17  Score=15.13  Aligned_cols=149  Identities=10%  Similarity=0.067  Sum_probs=73.0

Q ss_pred             CCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC-CCHH-HHHHHHHHHCCCCCEEEEECCCCHHHHHHH
Q ss_conf             56505998538743012305111899987640273512620166-3368-899999960488850552055203578876
Q gi|254780767|r  191 QWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV-SSQE-NLVRCIVSKWDISPEIIIDKEQKKQVFMTC  268 (383)
Q Consensus       191 ~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~-~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~l~~s  268 (383)
                      +..+|+-...||-         .+.++....++..++++++.-. |..+ ......+.+.+++..++. ......+|..+
T Consensus       121 dg~~ILTh~~S~t---------V~~~l~~A~~~gk~f~V~v~EsrP~~~G~~la~~L~~~GI~vt~I~-Dsav~~~m~~v  190 (315)
T 3ecs_A          121 DGATILTHAYSRV---------VLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVL-DAAVGYIMEKA  190 (315)
T ss_dssp             TTEEEEECSCCHH---------HHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEEC-GGGHHHHGGGC
T ss_pred             CCCEEEEECCCHH---------HHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC-HHHHHHHHHCC
T ss_conf             9999997488099---------9999999998699089999579986327999999997799879976-57999997508


Q ss_pred             HHHHC-------------CCHHHHH--HHHHHCCCEEEE---CCCCCCEEEEEECC----CCCCEEEEHHHCCCC-----
Q ss_conf             35523-------------3115668--887627530254---05774100001024----676102302440784-----
Q gi|254780767|r  269 NAAMA-------------ASGTVIL--ELALCGIPVVSI---YKSEWIVNFFIFYI----KTWTCALPNLIVDYP-----  321 (383)
Q Consensus       269 d~ai~-------------~SGTaTL--E~al~g~P~IV~---Yk~~~lt~~i~~li----k~~~i~LpNii~~~~-----  321 (383)
                      |.+++             .+||..+  =+..+++|.+|+   ||.....-.--+-+    +.+.-.+..--.++.     
T Consensus       191 d~VlvGAd~V~~nG~v~nkiGT~~iA~~Ak~~~vPvyV~aes~Kf~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~v~v~n  270 (315)
T 3ecs_A          191 DLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQTGQDLKEEH  270 (315)
T ss_dssp             SEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSCCCSSGGGSCGGGTC-------------CCBCC
T ss_pred             CEEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCC
T ss_conf             88998201896388885564189999998763997698325656766455655667612026766033377899976778


Q ss_pred             -----CCCHHH------CCCCCHHHHHHHHHHHHCCHHH
Q ss_conf             -----261242------0548989999999998449899
Q gi|254780767|r  322 -----LVPEYF------NSMIRSEALVRWIERLSQDTLQ  349 (383)
Q Consensus       322 -----ivPEli------Q~~~~~~~i~~~~~~ll~d~~~  349 (383)
                           +=||||      .+-++|..++.++.+++-.+..
T Consensus       271 p~fD~tP~~lIt~iiTE~Gi~~Ps~v~~~L~kly~~~~~  309 (315)
T 3ecs_A          271 PWVDYTAPSLITLLFTDLGVLTPSAVSDELIKLYLAAAE  309 (315)
T ss_dssp             CSEEEECGGGCSEEEETTEEECGGGHHHHHHHHHTCC--
T ss_pred             CCEECCCHHHCCEEECCCCCCCHHHHHHHHHHHHHCCHH
T ss_conf             652076989899998689826758899999997534101


No 263
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, nysgrc, NEW YORK structural genomix research consortium; 2.00A {Bermanella marisrubri}
Probab=37.47  E-value=18  Score=15.06  Aligned_cols=25  Identities=16%  Similarity=0.477  Sum_probs=12.6

Q ss_pred             CCCCCEEEE-ECHHHHH-HHHHHHHHH
Q ss_conf             128886898-5117765-799998663
Q gi|254780767|r   86 SSKPDVLLI-VDNPDFT-HRVAKRVRK  110 (383)
Q Consensus        86 ~~~Pd~vi~-iD~pgFn-l~lak~lkk  110 (383)
                      +++||++++ +.-|+.| +.+.+.+|+
T Consensus        48 ~~~pdlillD~~mP~~dG~el~~~ir~   74 (132)
T 3lte_A           48 TFEPAIMTLDLSMPKLDGLDVIRSLRQ   74 (132)
T ss_dssp             HTCCSEEEEESCBTTBCHHHHHHHHHT
T ss_pred             HCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf             479999999689878889999999984


No 264
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=37.15  E-value=18  Score=15.03  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=23.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      ||  |+.+++|-.||  .|..+.+.|-++ +  .++...+
T Consensus         1 Mk--KvalVTGas~G--IG~aiA~~la~~-G--a~V~i~~   33 (256)
T 1geg_A            1 MK--KVALVTGAGQG--IGKAIALRLVKD-G--FAVAIAD   33 (256)
T ss_dssp             -C--CEEEEETTTSH--HHHHHHHHHHHT-T--CEEEEEE
T ss_pred             CC--CEEEECCCCCH--HHHHHHHHHHHC-C--CEEEEEE
T ss_conf             99--89999166558--999999999987-9--9899997


No 265
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of NADP, oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=37.06  E-value=18  Score=15.02  Aligned_cols=135  Identities=15%  Similarity=0.219  Sum_probs=83.6

Q ss_pred             CCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC-CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             56505998538743012305111899987640273512620166-33688999999604888505520552035788763
Q gi|254780767|r  191 QWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV-SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCN  269 (383)
Q Consensus       191 ~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd  269 (383)
                      ..+.|.+-||=--. +.+---..-+.++.|.++..+.+|-|..+ .-......-.+.+.+.+.+++..-++...-+..+|
T Consensus        44 ~A~~VIIVPGYGMA-VAQAQh~V~El~~~L~~~g~~V~faIHPVAGRmPGHmNVLLAEA~VpYd~v~emdeiN~~f~~~D  122 (207)
T 1djl_A           44 EANSIIITPGYGLC-AAKAQYPIADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTD  122 (207)
T ss_dssp             HCSEEEEEECHHHH-HHTCHHHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHTTCCGGGEEEHHHHGGGGGGCS
T ss_pred             CCCEEEEECCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEEECHHCCCCHHHHHEEECCCCHHHHHCHHHHCCCHHCCC
T ss_conf             69859998682799-99888999999999997799699985063101643053301004898899727464155211087


Q ss_pred             HHHCCCHHHHH--------HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHH
Q ss_conf             55233115668--------88762753025405774100001024676102302440784261242
Q gi|254780767|r  270 AAMAASGTVIL--------ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYF  327 (383)
Q Consensus       270 ~ai~~SGTaTL--------E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEli  327 (383)
                      ++|+.--.=+.        ...+.|-|.+=+.|..-. ..++|=+..-|.+..|=+.-++-.-=|+
T Consensus       123 v~lViGANDvvNPaA~~dp~spI~GMPil~v~~ak~V-iv~KRsm~~GyaGv~NpLF~~~nt~Mlf  187 (207)
T 1djl_A          123 LVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQV-IVMKRSLGVGYAAVDNPIFYKPNTAMLL  187 (207)
T ss_dssp             EEEEESCCGGGCTHHHHCTTSTTTTCCCCCGGGSSEE-EEEESSSCCCTTCCCCGGGGSTTEEEEE
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE-EEEECCCCCCCCCCCCCCEECCCCEEEE
T ss_conf             9999547654485113799996479955571508789-9996778788577867334448836994


No 266
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=37.03  E-value=10  Score=16.60  Aligned_cols=148  Identities=16%  Similarity=0.095  Sum_probs=71.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973899839999717899947880650444531101367466459999999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT   80 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~   80 (383)
                      |+.+|+.|+ | +|| .-|..|++-|.++  |++++..+.+..- .+|-..-.-...+....+-.....+     ....+
T Consensus        17 ms~~kv~Iv-G-asG-yvG~eLlrlL~~H--P~~ei~~l~aS~~-saGk~~~~~~~~~~~~~~~~~~~~~-----~~~~~   85 (381)
T 3hsk_A           17 MSVKKAGVL-G-ATG-SVGQRFILLLSKH--PEFEIHALGASSR-SAGKKYKDAASWKQTETLPETEQDI-----VVQEC   85 (381)
T ss_dssp             -CCEEEEEE-T-TTS-HHHHHHHHHHTTC--SSEEEEEEEECTT-TTTSBHHHHCCCCCSSCCCHHHHTC-----BCEES
T ss_pred             CCEEEEEEE-C-CHH-HHHHHHHHHHHCC--CCCCEEEEEECCC-CCCCCHHHCCCCCCCCCCCCCCCCE-----EEEEC
T ss_conf             752279999-9-701-9999999999749--9970689986475-5896434406653431355566540-----58845


Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE-----EEC---CCCCCCCCCC-HHHHHHHHHHHCCCCCCCH
Q ss_conf             861001288868985117765799998663013463111-----100---2211003663-5579999986401567742
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN-----YVC---PSVWAWREGR-ARKMCAYINQVISILPFEK  151 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~-----yv~---PqvWAWr~~R-~k~~~~~~d~~~~ifpFE~  151 (383)
                      .......+.|++++.=-.|....+++.+..+  ++.+|-     .-.   |-+|.|-..- ...+..+   ..      .
T Consensus        86 ~~~~~~~~~DvvFlalP~~~s~~~~~~~~~~--g~~vID~Ssa~R~~~d~~~~~~~~~~~~~~~~~~~---~~------~  154 (381)
T 3hsk_A           86 KPEGNFLECDVVFSGLDADVAGDIEKSFVEA--GLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENK---VK------Q  154 (381)
T ss_dssp             SSCTTGGGCSEEEECCCHHHHHHHHHHHHHT--TCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHH---HH------H
T ss_pred             CHHHCHHCCCEEEECCCCHHHHHHHHHHHHC--CCEEECCHHHHHCCCCCCEEEECCCHHHHHHHHHH---HH------H
T ss_conf             4110400177899648826788887877637--95552255664234784224410486778999862---13------2


Q ss_pred             HHHHCCCCCCEEECCCCCCC
Q ss_conf             23200255314763882112
Q gi|254780767|r  152 EVMQRLGGPPTTFVGHPLSS  171 (383)
Q Consensus       152 ~~f~k~~~~~~~fVGHPl~d  171 (383)
                      +++.. .-..+..|.||-.-
T Consensus       155 e~~r~-~i~~a~lIanPGC~  173 (381)
T 3hsk_A          155 AVSKG-GKKPGFIICISNCS  173 (381)
T ss_dssp             HHHTT-CCCCCEEEEECCHH
T ss_pred             HHCCC-CHHCCCHHHCCCCC
T ss_conf             20100-01010066627962


No 267
>1vkm_A Conserved hypothetical protein TM1464; conserved hypothetical protein possibly involved in carbohydrate metabolism, structural genomics; HET: MSE UNL; 1.90A {Thermotoga maritima MSB8} SCOP: c.138.1.1
Probab=36.02  E-value=13  Score=15.98  Aligned_cols=48  Identities=17%  Similarity=0.186  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHCCCH-------HHHHHHH-HHCCCEEEECCCCCCEEEEEE--CCCCCC
Q ss_conf             357887635523311-------5668887-627530254057741000010--246761
Q gi|254780767|r  262 KQVFMTCNAAMAASG-------TVILELA-LCGIPVVSIYKSEWIVNFFIF--YIKTWT  310 (383)
Q Consensus       262 ~~~l~~sd~ai~~SG-------TaTLE~a-l~g~P~IV~Yk~~~lt~~i~~--lik~~~  310 (383)
                      ...|+.+..+++|||       -.|||.. -+|+| |+.|+++.+-.|+.+  -+++++
T Consensus       143 L~eL~~tpv~VVcaG~KsiLDi~~TlE~LET~GV~-Vvgy~td~fPaFy~~~Sg~~~~~  200 (297)
T 1vkm_A          143 LTEMSSSRAVLVSSGIKSILDVEATFEMLETLEIP-LVGFRTNEFPLFFSRKSGRRVPR  200 (297)
T ss_dssp             HHHHTTCCEEEEESBBCTTSCHHHHHHHHHHTTCC-EEEESCSBCCBTTBSCCSCBCCE
T ss_pred             HHHHHCCCEEEEECCCHHHCCCHHHHHHHHHCCEE-EEEECCCCCCCEEECCCCCCCCC
T ss_conf             89983398179940635440547789998736637-99626887551440789985887


No 268
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=35.10  E-value=19  Score=14.82  Aligned_cols=33  Identities=27%  Similarity=0.409  Sum_probs=26.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             45999976821478999999999973899839999717
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG   41 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG   41 (383)
                      ||+.+++|-.||  .|..+.+.|.+.   +.++..++-
T Consensus         1 mKVvlVTGas~G--IG~aia~~la~~---Ga~Vv~~~~   33 (257)
T 1fjh_A            1 MSIIVISGCATG--IGAATRKVLEAA---GHQIVGIDI   33 (257)
T ss_dssp             CCEEEEETTTSH--HHHHHHHHHHHT---TCEEEEEES
T ss_pred             CCEEEECCCCCH--HHHHHHHHHHHC---CCEEEEEEC
T ss_conf             979999198789--999999999987---999999968


No 269
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=34.71  E-value=20  Score=14.78  Aligned_cols=64  Identities=16%  Similarity=0.368  Sum_probs=36.9

Q ss_pred             HHHHHHCCCCCCCEEEE-ECHHHH----HHHHHHHHHHHCCCCCCEEEECCC-CCCCCCCCHHHHHHHHHHHCC
Q ss_conf             99986100128886898-511776----579999866301346311110022-110036635579999986401
Q gi|254780767|r   78 NQTVELIVSSKPDVLLI-VDNPDF----THRVAKRVRKKMPNLPIINYVCPS-VWAWREGRARKMCAYINQVIS  145 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~-iD~pgF----nl~lak~lkk~~~~ipvi~yv~Pq-vWAWr~~R~k~~~~~~d~~~~  145 (383)
                      .+..+...+.+.+.+++ ||+||=    ...++..+++.  ..|++-||.|- =+|  .+-...+.-.+|+++.
T Consensus        28 ~~~l~~a~~~~~kaivL~IdSPGG~v~~~~~I~~~i~~~--~~~v~~~v~~~~~~A--aS~g~~ia~a~d~i~~   97 (230)
T 3bpp_A           28 DRYITIAEQDNAEAIIIELDTPGGRADAMMNIVQRIQQS--KIPVIIYVYPPGASA--ASAGTYIALGSHLIAM   97 (230)
T ss_dssp             HHHHHHHHHTTCSEEEEEEEBSCBCHHHHHHHHHHHHTC--SSCEEEEECSTTCEE--ETHHHHHHHTSSEEEE
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHH--HHHHHHHHHCCCEEEE
T ss_conf             999999976899869999859881899999999998604--678857999734467--7778998850898997


No 270
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=34.26  E-value=20  Score=14.73  Aligned_cols=61  Identities=11%  Similarity=0.081  Sum_probs=25.3

Q ss_pred             HHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHH
Q ss_conf             55233115668887627530254057741000010246761023024407842612420548989
Q gi|254780767|r  270 AAMAASGTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSE  334 (383)
Q Consensus       270 ~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~  334 (383)
                      .+++.+-.-.+++.+.+...+... ..++...  .-++--|+|+|=.+ |+.=+-+.++-..+++
T Consensus       223 ~~~a~~~~~~~~~i~~~~~~v~~~-s~~~~g~--yg~~~v~~s~P~~l-g~~Gv~~~~~l~L~~~  283 (308)
T 2d4a_B          223 YGPAAGLVLTVEAIKRDSKRIYPY-SLYLQGE--YGYNDIVAEVPAVI-GKSGIERIIELPLTED  283 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEE-EEEEESG--GGCEEEEEEEEEEE-ETTEEEEECCCCCCHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEE-EEEECCC--CCCCCEEEEEEEEE-CCCCEEEECCCCCCHH
T ss_conf             599999999999752698737887-8875156--78777899964898-4894599768998999


No 271
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=33.86  E-value=20  Score=14.69  Aligned_cols=171  Identities=15%  Similarity=0.208  Sum_probs=86.5

Q ss_pred             CHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE----------CHHHHHHHHHHHHHHHC-CCCCCEEEEC
Q ss_conf             444531101367466459999999999861001288868985----------11776579999866301-3463111100
Q gi|254780767|r   54 DFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLIV----------DNPDFTHRVAKRVRKKM-PNLPIINYVC  122 (383)
Q Consensus        54 ~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~i----------D~pgFnl~lak~lkk~~-~~ipvi~yv~  122 (383)
                      +++|--+.|..+..   ..+.|...++++  +..+|++++.+          |-.    .+|+.+..+. ..+|++.|=+
T Consensus        86 ~leE~Di~g~~~~~---~eL~r~i~~l~~--~r~~Pk~IfV~sTC~seiIGdDl~----~va~~l~~~~~~~v~v~~~~~  156 (437)
T 3aek_A           86 VLEEQDLAGLADAH---KELDREVAKLLE--RRPDIRQLFLVGSCPSEVLKLDLD----RAAERLSGLHAPHVRVYSYTG  156 (437)
T ss_dssp             ECCGGGGSSSCCHH---HHHHHHHHHHHH--TCTTCCEEEEEECHHHHHTTCCHH----HHHHHHHHHSTTTCEEEEEEC
T ss_pred             ECCCCHHHCCCCCH---HHHHHHHHHHHH--HCCCCCEEEEECCCCHHHHCCCHH----HHHHHHHHHCCCCCEEEEECC
T ss_conf             54613642557627---999999999996--089987899974683887677899----999999872089824996248


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             22110036635579999986401567742232002553147638821122100135588897618765565059985387
Q gi|254780767|r  123 PSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSR  202 (383)
Q Consensus       123 PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR  202 (383)
                      |.+   ..+-..-....+..++--.|       +...-++..+|. +-+..  ...-....++.|+.    +..++||++
T Consensus       157 ~g~---~~~~~~G~d~~l~aLv~~~~-------~~~~~~v~i~G~-~~~~d--~~ei~rlL~~~GI~----v~~~~p~~~  219 (437)
T 3aek_A          157 SGL---DTTFTQGEDTCLAAMVPTLD-------TTEAAELIVVGA-LPDVV--EDQCLSLLTQLGVG----PVRMLPARR  219 (437)
T ss_dssp             CTT---TCCTTHHHHHHHHHHGGGSC-------BCCCCCEEEESC-CCHHH--HHHHHHHHHHTTCC----CEEEESCSS
T ss_pred             CCC---CCCHHHHHHHHHHHHHCCCC-------CCCCCCCEEECC-CCCCH--HHHHHHHHHHCCCE----EEEECCCCC
T ss_conf             874---53367999999999845268-------877876214146-78406--99999999986997----899838987


Q ss_pred             CCCHHHH---------CCCHHHHHHHHHHCCCCCEEEE--CCC-CCHHHHHHHHHHHCCCC
Q ss_conf             4301230---------5111899987640273512620--166-33688999999604888
Q gi|254780767|r  203 AQEIYKI---------LPFFESAVASLVKRNPFFRFSL--VTV-SSQENLVRCIVSKWDIS  251 (383)
Q Consensus       203 ~~EI~~~---------lP~~l~~~~~l~~~~~~~~~~i--~~~-~~~~~~~~~~~~~~~~~  251 (383)
                      ..|+..+         -|.+..++..+.+++- .-+.-  |.. .....+++...+.++.+
T Consensus       220 ~~~l~~~~~~~~~i~~~p~~~~~a~~le~r~g-~p~~~~~PiG~egT~~wL~~Ia~~~Gi~  279 (437)
T 3aek_A          220 SDIEPAVGPNTRFILAQPFLGETTGALERRGA-KRIAAPFPFGEEGTTLWLKAVADAYGVS  279 (437)
T ss_dssp             GGGCCCBCTTCEEEESSTTCHHHHHHHHHTTC-EECCCCCSCHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCCCEEEEECHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             88897446665788746889999999998469-6643789775699999999999884887


No 272
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=33.53  E-value=20  Score=14.66  Aligned_cols=22  Identities=18%  Similarity=0.250  Sum_probs=11.9

Q ss_pred             HHCCCHHHHH-HHHHHCCCEEEE
Q ss_conf             5233115668-887627530254
Q gi|254780767|r  271 AMAASGTVIL-ELALCGIPVVSI  292 (383)
Q Consensus       271 ai~~SGTaTL-E~al~g~P~IV~  292 (383)
                      .+...|...+ .++-+.+|.+++
T Consensus       479 Gilk~GA~iv~Ala~~~vP~itv  501 (760)
T 3ff6_A          479 QVLKFGAYIVDGLRQYKQPILIY  501 (760)
T ss_dssp             THHHHHHHHHHHHHTCCSCEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             89999999999997089987999


No 273
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, structurual genomics; 2.20A {Pseudomonas aeruginosa PAO1} SCOP: c.2.1.3 d.81.1.1
Probab=33.05  E-value=21  Score=14.61  Aligned_cols=94  Identities=20%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             CCC-CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             987-4599997682147899999999997389983999971789994788065044453110136746645999999999
Q gi|254780767|r    1 MNS-LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         1 m~~-mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      |++ |||-|+.+  || .-|..|++-|.++.-|..++..+..++  ++|-..-+.-+++.+-.+                
T Consensus         3 Ms~~i~VaIvGA--TG-yvG~eLi~lL~~~~hP~~~l~~~aS~~--saGk~i~~~~~~l~v~~l----------------   61 (340)
T 2hjs_A            3 MSQPLNVAVVGA--TG-SVGEALVGLLDERDFPLHRLHLLASAE--SAGQRMGFAESSLRVGDV----------------   61 (340)
T ss_dssp             --CCCCEEEETT--TS-HHHHHHHHHHHHTTCCCSCEEEEECTT--TTTCEEEETTEEEECEEG----------------
T ss_pred             CCCCCEEEEECC--CC-HHHHHHHHHHHHCCCCCCEEEEEECCC--CCCCEEEECCEEEEEEEC----------------
T ss_conf             999855999888--55-999999999986699845399998667--789776689927899968----------------


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             9861001288868985117765799998663013463111
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                        +...-.+.|+|++---.|....++..+.+.  |++++-
T Consensus        62 --~~~~~~~~DvvF~alp~~~s~~~~~~~~~~--g~~ViD   97 (340)
T 2hjs_A           62 --DSFDFSSVGLAFFAAAAEVSRAHAERARAA--GCSVID   97 (340)
T ss_dssp             --GGCCGGGCSEEEECSCHHHHHHHHHHHHHT--TCEEEE
T ss_pred             --CHHHHCCCCEEEECCCCCHHHHHHHHHHHC--CEEEEE
T ss_conf             --732420488899858861479999998546--917997


No 274
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99}
Probab=32.99  E-value=21  Score=14.60  Aligned_cols=38  Identities=13%  Similarity=0.256  Sum_probs=25.2

Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             6100128886898511776579999866301346311110
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYV  121 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv  121 (383)
                      +.+..++||+|++=|-.|  +.+++++|+...++|++..-
T Consensus        38 ~~~~~~~~Dlvilp~~~G--~~l~~~ir~~~~~~pIi~lt   75 (223)
T 2hqr_A           38 YLMDIRNYDLVMVSDKNA--LSFVSRIKEKHSSIVVLVSS   75 (223)
T ss_dssp             HHHTTSCCSEEEECCTTH--HHHHHHHHHHCTTSEEEEEE
T ss_pred             HHHHCCCCCEEEECCCCH--HHHHHHHHHCCCCCEEEEEC
T ss_conf             998458999999589889--99999987648983299823


No 275
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=32.96  E-value=21  Score=14.60  Aligned_cols=39  Identities=26%  Similarity=0.450  Sum_probs=24.5

Q ss_pred             HHHHHCCCCCCCEEEE--ECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             9986100128886898--51177657999986630134631111
Q gi|254780767|r   79 QTVELIVSSKPDVLLI--VDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~--iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +..+.+.+.+||.+|+  +|...+. ...++++++  |||++.+
T Consensus        56 ~~i~~li~~~~dgIii~~~~~~~~~-~~l~~a~~~--gIpvv~~   96 (289)
T 3brs_A           56 ELIEEAIKRKPDVILLAAADYEKTY-DAAKEIKDA--GIKLIVI   96 (289)
T ss_dssp             HHHHHHHHTCCSEEEECCSCTTTTH-HHHTTTGGG--TCEEEEE
T ss_pred             HHHHHHHHCCCCEEEEECCCHHHHH-HHHHHHHHC--CCCEEEE
T ss_conf             9999999769999999688415369-999999975--9987999


No 276
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Ralstonia solanacearum MOLK2}
Probab=32.71  E-value=21  Score=14.57  Aligned_cols=49  Identities=27%  Similarity=0.369  Sum_probs=34.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC--HHHHHCCCEEEEC
Q ss_conf             98745999976821478999999999973899839999717--8999478806504
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG--PSLQKEGLVSLFD   54 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG--~~m~~~G~~~~~~   54 (383)
                      |+-+||.|+-+..=|=.+|+.|.+    . +.++.++.-+-  +.+++.|++..-+
T Consensus         1 m~m~KI~IiGaGaiG~~~A~~L~~----~-G~~Vtlv~R~~~~~~i~~~Gl~i~~~   51 (335)
T 3ghy_A            1 MSLTRICIVGAGAVGGYLGARLAL----A-GEAINVLARGATLQALQTAGLRLTED   51 (335)
T ss_dssp             -CCCCEEEESCCHHHHHHHHHHHH----T-TCCEEEECCHHHHHHHHHTCEEEEET
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHH----C-CCCEEEEEEHHHHHHHHHCCCEEECC
T ss_conf             998889998877999999999996----8-99089997589999999879099359


No 277
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, protein structure initiative; 2.40A {Rhodospirillum rubrum atcc 11170}
Probab=32.61  E-value=21  Score=14.56  Aligned_cols=38  Identities=18%  Similarity=0.433  Sum_probs=20.8

Q ss_pred             HCCCCCCCEEEE-ECHHHHH-HHHHHHHHHH--CCCCCCEEE
Q ss_conf             100128886898-5117765-7999986630--134631111
Q gi|254780767|r   83 LIVSSKPDVLLI-VDNPDFT-HRVAKRVRKK--MPNLPIINY  120 (383)
Q Consensus        83 ~i~~~~Pd~vi~-iD~pgFn-l~lak~lkk~--~~~ipvi~y  120 (383)
                      .+...+||++|+ +.-|+.| +.+.+.+|+.  ...+|+|-.
T Consensus        54 ~~~~~~~dlIilD~~mP~~dG~el~~~ir~~~~~~~iPvI~l   95 (152)
T 3heb_A           54 RVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVIL   95 (152)
T ss_dssp             GGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred             HHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             665069998998689999988999999984877799958999


No 278
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: TRP; 2.50A {Thermotoga maritima}
Probab=32.22  E-value=18  Score=14.98  Aligned_cols=27  Identities=22%  Similarity=0.385  Sum_probs=20.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             9874599997682147899999999997
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKE   28 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~   28 (383)
                      |+.|||| +.=+|||++|-++++-.+++
T Consensus        10 ~~~~ri~-tG~~PTG~lHlG~~i~~i~~   36 (340)
T 2g36_A           10 HHHMRIL-SGMRPTGKLHIGHLVGALEN   36 (340)
T ss_dssp             --CCEEE-EEECCCSSCBHHHHHTHHHH
T ss_pred             CCCCEEE-ECCCCCCCCHHHHHHHHHHH
T ss_conf             5445366-56188971458878999999


No 279
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=32.07  E-value=22  Score=14.50  Aligned_cols=36  Identities=19%  Similarity=0.309  Sum_probs=24.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             9874599997682147899999999997389983999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV   37 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~   37 (383)
                      |++ ||+++.|-+.-+-....+++++.+..+.+.++.
T Consensus         1 Msk-KIl~i~GS~R~~s~t~~la~~~~~~l~~~~ev~   36 (192)
T 3fvw_A            1 MSK-RILFIVGSFSEGSFNRQLAKKAETIIGDRAQVS   36 (192)
T ss_dssp             --C-EEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEE
T ss_pred             CCC-EEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf             998-499998999999879999999998757997799


No 280
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthesis, methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=31.72  E-value=22  Score=14.46  Aligned_cols=32  Identities=13%  Similarity=0.393  Sum_probs=23.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             4599997682147899999999997389983999971
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |||+|..|  || ..|+.|++.|.++ + ..+++++-
T Consensus         1 MKILVTG~--sG-fIGs~lv~~Ll~~-g-~~~V~~ld   32 (345)
T 2bll_A            1 MRVLILGV--NG-FIGNHLTERLLRE-D-HYEVYGLD   32 (345)
T ss_dssp             CEEEEETC--SS-HHHHHHHHHHHHS-T-TCEEEEEE
T ss_pred             CEEEEECC--CC-HHHHHHHHHHHHC-C-CCEEEEEE
T ss_conf             97999898--87-8999999999977-9-98899995


No 281
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=31.72  E-value=22  Score=14.46  Aligned_cols=53  Identities=15%  Similarity=0.184  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHHH----HHHCCCCCCCEEEEECHHHHHHH--HHHHHHHHCCCCCCEEE
Q ss_conf             367466459999999999----86100128886898511776579--99986630134631111
Q gi|254780767|r   63 IMQVVRHLPQFIFRINQT----VELIVSSKPDVLLIVDNPDFTHR--VAKRVRKKMPNLPIINY  120 (383)
Q Consensus        63 ~~evl~~~~~~~~~~~~~----~~~i~~~~Pd~vi~iD~pgFnl~--lak~lkk~~~~ipvi~y  120 (383)
                      +..++.+-..+....+.+    .+.....++|.|+++++-||-+-  +|..+     ++|.++.
T Consensus        30 it~ll~dp~~~~~i~~~la~~l~e~~~~~~~D~Vvg~e~~Gi~la~~lA~~L-----~~p~v~~   88 (187)
T 1g2q_A           30 FLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALAL-----GVGFVPV   88 (187)
T ss_dssp             CHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHH-----TCEEEEE
T ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH-----CCCEEEE
T ss_conf             8246549999999999999999986176798799983457535589999986-----9984899


No 282
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosphatase, mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=31.17  E-value=15  Score=15.48  Aligned_cols=40  Identities=18%  Similarity=0.303  Sum_probs=19.8

Q ss_pred             HHHCCCCCCCEEEEECHHHH--------HHHHHHHHHHHCCCCCCEEE
Q ss_conf             86100128886898511776--------57999986630134631111
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDF--------THRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgF--------nl~lak~lkk~~~~ipvi~y  120 (383)
                      ...+...+||+||-==..|.        +=-++..+-....|||=|=+
T Consensus        77 l~~l~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GipsIAv  124 (254)
T 2v4n_A           77 VNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAV  124 (254)
T ss_dssp             HHTTSSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEE
T ss_pred             HCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             420057999989979738974773623118899999999749983489


No 283
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=31.10  E-value=22  Score=14.40  Aligned_cols=38  Identities=13%  Similarity=0.163  Sum_probs=22.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++-||.+.+-|--++-.|.+++..+-+..+  .++.-+|
T Consensus         1 ~~k~kVvi~~~~~D~H~lG~~~va~~l~~~G--~~V~~LG   38 (137)
T 1ccw_A            1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAG--FNVVNIG   38 (137)
T ss_dssp             CCCCEEEEEEETTCCCCHHHHHHHHHHHHTT--CEEEEEE
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCC--CEEEECC
T ss_conf             9998799994698745899999999999879--8799778


No 284
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, alter splicing, cell junction, cell membrane, endoplasmic reticul glycoprotein; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 2wjw_A* 2wjx_A
Probab=31.06  E-value=22  Score=14.39  Aligned_cols=33  Identities=6%  Similarity=-0.021  Sum_probs=26.1

Q ss_pred             CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             12888689851177657999986630134631111
Q gi|254780767|r   86 SSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+++|+=-+.+....++..+...  ++|.+-|
T Consensus        58 ~~~v~aiiGp~~s~~~~~~~~~~~~~--~ip~is~   90 (376)
T 3hsy_A           58 SRGVYAIFGFYDKKSVNTITSFCGTL--HVSFITP   90 (376)
T ss_dssp             HTTCSEEEECCCTTTHHHHHHHHHHH--TCEEEEC
T ss_pred             HCCCEEEECCCCCHHHHHHHHHHHHC--CCCCCCC
T ss_conf             75986999999818899999998633--6643345


No 285
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha JMP134}
Probab=30.99  E-value=22  Score=14.39  Aligned_cols=47  Identities=17%  Similarity=0.271  Sum_probs=31.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH---HHHCCCEEEE
Q ss_conf             9874599997682147899999999997389983999971789---9947880650
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPS---LQKEGLVSLF   53 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~---m~~~G~~~~~   53 (383)
                      |+.|||.|+-+.+=|=.+|+.|-+    . +.++.++.= |++   .++.|+....
T Consensus        17 ~~~MkI~IlGaGaiGt~~A~~L~~----a-G~dV~li~R-~~~~~~i~~~Gl~l~~   66 (318)
T 3hwr_A           17 FQGMKVAIMGAGAVGCYYGGMLAR----A-GHEVILIAR-PQHVQAIEATGLRLET   66 (318)
T ss_dssp             ---CEEEEESCSHHHHHHHHHHHH----T-TCEEEEECC-HHHHHHHHHHCEEEEC
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHH----C-CCCEEEEEC-HHHHHHHHHCCEEEEC
T ss_conf             169989999907999999999984----7-990899983-8999999977969946


No 286
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Vibrio parahaemolyticus AQ3810}
Probab=30.91  E-value=23  Score=14.38  Aligned_cols=40  Identities=28%  Similarity=0.390  Sum_probs=28.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
Q ss_conf             4599997682147899999999997389983999971789994
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQK   46 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~   46 (383)
                      ||+-+++|-.||  .|..+.+.|-++ +.++-+.+.-.+++++
T Consensus         1 MkiVlITGassG--IG~a~A~~la~~-G~~V~l~~R~~~~l~~   40 (230)
T 3guy_A            1 MSLIVITGASSG--LGAELAKLYDAE-GKATYLTGRSESKLST   40 (230)
T ss_dssp             --CEEEESTTSH--HHHHHHHHHHHT-TCCEEEEESCHHHHHH
T ss_pred             CCEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCHHHHHH
T ss_conf             999999187719--999999999987-9989999899999999


No 287
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=30.87  E-value=22  Score=14.45  Aligned_cols=27  Identities=7%  Similarity=-0.117  Sum_probs=13.0

Q ss_pred             CCCCEEEEHHHCCCCCCCHHHCC-CCCHH
Q ss_conf             67610230244078426124205-48989
Q gi|254780767|r  307 KTWTCALPNLIVDYPLVPEYFNS-MIRSE  334 (383)
Q Consensus       307 k~~~i~LpNii~~~~ivPEliQ~-~~~~~  334 (383)
                      ...|+|+|=+|-.+.+ -+.++- .++++
T Consensus       268 ~~~~~s~P~~ig~~Gv-~~ivel~~L~~~  295 (326)
T 1smk_A          268 ELPFFASKVRLGRNGI-EEVYSLGPLNEY  295 (326)
T ss_dssp             SSSEEEEEEEEETTEE-EEECCCCCCCHH
T ss_pred             CCEEEEEEEEECCCEE-EEECCCCCCCHH
T ss_conf             5279999819948933-998348999999


No 288
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=30.77  E-value=23  Score=14.36  Aligned_cols=28  Identities=21%  Similarity=0.398  Sum_probs=19.1

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHH
Q ss_conf             8610012888689851177657999986630
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKK  111 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~  111 (383)
                      .+.|..-+||+||.-+   ++-.....+++.
T Consensus        88 ~E~i~~l~PDlii~~~---~~~~~~~~l~~~  115 (296)
T 2chu_A           88 FEAINALKPDLIIISG---RQSKFYDKLKEI  115 (296)
T ss_dssp             HHHHHHTCCSEEEECT---TTGGGHHHHHTT
T ss_pred             HHHHHHCCCCEEEECC---CCHHHHHHHHHH
T ss_conf             9999706998599458---646899999952


No 289
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=30.68  E-value=23  Score=14.35  Aligned_cols=32  Identities=19%  Similarity=0.370  Sum_probs=17.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             59999768214789999999999738998399997
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGV   39 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~gi   39 (383)
                      |+.+++|-.||  .|..+.+.|-+. +.++-+.+.
T Consensus        22 KvalITGas~G--IG~aiA~~la~~-Ga~V~i~~r   53 (267)
T 1vl8_A           22 RVALVTGGSRG--LGFGIAQGLAEA-GCSVVVASR   53 (267)
T ss_dssp             CEEEEETTTSH--HHHHHHHHHHHT-TCEEEEEES
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEEC
T ss_conf             98999489878--999999999987-998999979


No 290
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=30.61  E-value=23  Score=14.34  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHCCC--CCCCEEEEECHHHHHHH--HHHHHHHHCCCCCCEEE
Q ss_conf             9999999999861001--28886898511776579--99986630134631111
Q gi|254780767|r   71 PQFIFRINQTVELIVS--SKPDVLLIVDNPDFTHR--VAKRVRKKMPNLPIINY  120 (383)
Q Consensus        71 ~~~~~~~~~~~~~i~~--~~Pd~vi~iD~pgFnl~--lak~lkk~~~~ipvi~y  120 (383)
                      -.+....+.+.+.++.  .+||.|+++++-||=+-  +|..+     |+|.++.
T Consensus        52 ~~~~~i~~~l~~~~k~~~~~~D~Ivgie~~Gi~~A~~lA~~L-----g~p~v~v  100 (236)
T 1qb7_A           52 ETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVEL-----EIPFVLM  100 (236)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHH-----TCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHH-----HCCEEEE
T ss_conf             999999999999998548999899966446589899999986-----3476886


No 291
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=30.19  E-value=23  Score=14.30  Aligned_cols=78  Identities=10%  Similarity=0.092  Sum_probs=46.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      |||-|+.-..=    |..+.+.|++  + ++++.++....-+  ..+...++                          +.
T Consensus         1 MkVgIIG~G~i----G~~v~~~l~~--~-~~el~~v~d~~~~--~~~~~~~~--------------------------de   45 (236)
T 2dc1_A            1 MLVGLIGYGAI----GKFLAEWLER--N-GFEIAAILDVRGE--HEKMVRGI--------------------------DE   45 (236)
T ss_dssp             CEEEEECCSHH----HHHHHHHHHH--T-TCEEEEEECSSCC--CTTEESSH--------------------------HH
T ss_pred             CEEEEECCCHH----HHHHHHHHHH--C-CCEEEEEEECCCC--CCCCCCCH--------------------------HH
T ss_conf             97999958889----9999999971--9-9889999967850--22444899--------------------------99


Q ss_pred             CCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             00128886898511776579999866301346311
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +...+||+||-.-.|+.....++++=++  |++++
T Consensus        46 ~l~~~~DvVie~a~~~a~~e~a~~~L~~--G~~vv   78 (236)
T 2dc1_A           46 FLQREMDVAVEAASQQAVKDYAEKILKA--GIDLI   78 (236)
T ss_dssp             HTTSCCSEEEECSCHHHHHHHHHHHHHT--TCEEE
T ss_pred             HHCCCCCEEEEECCCCCCHHHHHHHHHC--CCCEE
T ss_conf             9438887899906974047999999973--99799


No 292
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=29.69  E-value=24  Score=14.24  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=21.9

Q ss_pred             HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             610012888689851177657999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +.+.+.+..++.. .+.+.++.++..+.+.  +||++..
T Consensus        69 ~lv~~~~v~vi~~-~~S~~~~a~~~~~~~~--~ip~i~~  104 (392)
T 3lkb_A           69 EAVDRFKIPVFLS-YATGANLQLKPLIQEL--RIPTIPA  104 (392)
T ss_dssp             HHHHTTCCSCEEE-CCHHHHHHHHHHHHHH--TCCEEES
T ss_pred             HHHHCCCCEEEEC-CCCHHHHHHHHHHHHC--CCEEECC
T ss_conf             9986699569808-9858899988888764--9238724


No 293
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=29.64  E-value=24  Score=14.24  Aligned_cols=34  Identities=24%  Similarity=0.409  Sum_probs=23.5

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+.|||+|. | .||- .|..++++|.++   +.++.++.
T Consensus        19 ~~~MkIlI~-G-asG~-iG~~lv~~Ll~~---g~~V~~l~   52 (236)
T 3e8x_A           19 FQGMRVLVV-G-ANGK-VARYLLSELKNK---GHEPVAMV   52 (236)
T ss_dssp             --CCEEEEE-T-TTSH-HHHHHHHHHHHT---TCEEEEEE
T ss_pred             CCCCEEEEE-C-CCCH-HHHHHHHHHHHC---CCEEEEEE
T ss_conf             799908999-9-9888-999999999978---59899998


No 294
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=29.52  E-value=6.3  Score=18.04  Aligned_cols=47  Identities=23%  Similarity=0.307  Sum_probs=32.2

Q ss_pred             CCCCCCCEEEEECHHHHHH---HHHHHHHHHCCCCCCEEEECCCCCCCCCCC
Q ss_conf             0012888689851177657---999986630134631111002211003663
Q gi|254780767|r   84 IVSSKPDVLLIVDNPDFTH---RVAKRVRKKMPNLPIINYVCPSVWAWREGR  132 (383)
Q Consensus        84 i~~~~Pd~vi~iD~pgFnl---~lak~lkk~~~~ipvi~yv~PqvWAWr~~R  132 (383)
                      ....+..+||.|++-|+.-   ++.+.+++.  |+++|-=.|-...|.-.++
T Consensus       154 ~it~ktkaIi~vh~~G~~~d~~~i~~ia~~~--~i~vIEDaA~a~ga~~~g~  203 (437)
T 3bb8_A          154 AVSDKTKAIMIAHTLGNLFDLAEVRRVADKY--NLWLIEDCCDALGSTYDGK  203 (437)
T ss_dssp             HCCTTEEEEEEECGGGCCCCHHHHHHHHHHH--TCEEEEECTTCTTCEETTE
T ss_pred             HHCCCCCEEEEECCCCCCCCHHHHHHHHHHC--CCCEEECCHHHHCCEECCE
T ss_conf             7246973899845777633348999999985--9817825615316726988


No 295
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=29.48  E-value=21  Score=14.55  Aligned_cols=87  Identities=11%  Similarity=0.149  Sum_probs=43.8

Q ss_pred             EHHHHHHHHHHHHHH-------------HHHHHHHCCCCCCCEEEEECH-----------HHHHHHHHHHH-HHHCCCC-
Q ss_conf             136746645999999-------------999986100128886898511-----------77657999986-6301346-
Q gi|254780767|r   62 GIMQVVRHLPQFIFR-------------INQTVELIVSSKPDVLLIVDN-----------PDFTHRVAKRV-RKKMPNL-  115 (383)
Q Consensus        62 G~~evl~~~~~~~~~-------------~~~~~~~i~~~~Pd~vi~iD~-----------pgFnl~lak~l-kk~~~~i-  115 (383)
                      ++.|+..+|..+++.             +.++.+-.-....|++|.-|.           -|.-+.++|.+ -+..-|| 
T Consensus        95 tVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~~iVVTDG~rILGLGD~G~~gm~I~~GKl~Ly~~~gGI~  174 (564)
T 1pj3_A           95 TVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR  174 (564)
T ss_dssp             HHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf             16999999887521777048602665569999970774572299996671021066789884333100567766407877


Q ss_pred             -----CCEEEE---------CCCCCCCCCCCHH--H----HHHHHHHHCCCCC
Q ss_conf             -----311110---------0221100366355--7----9999986401567
Q gi|254780767|r  116 -----PIINYV---------CPSVWAWREGRAR--K----MCAYINQVISILP  148 (383)
Q Consensus       116 -----pvi~yv---------~PqvWAWr~~R~k--~----~~~~~d~~~~ifp  148 (383)
                           |++-=+         -|..--||..|++  .    +.+++..+...||
T Consensus       175 P~~~lPi~LDvGTnN~~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~f~  227 (564)
T 1pj3_A          175 PDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYG  227 (564)
T ss_dssp             GGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHCCCEEEECCCCHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             66545557405777175503822203344556620389999999999998559


No 296
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=29.47  E-value=24  Score=14.22  Aligned_cols=20  Identities=35%  Similarity=0.582  Sum_probs=14.7

Q ss_pred             HHHHHHHHHCCCEEEECCCC
Q ss_conf             56688876275302540577
Q gi|254780767|r  277 TVILELALCGIPVVSIYKSE  296 (383)
Q Consensus       277 TaTLE~al~g~P~IV~Yk~~  296 (383)
                      +|-.|+..+++|+|-+-.++
T Consensus       129 ~ai~Ea~~l~IP~I~ivDTn  148 (208)
T 1vi6_A          129 QAVSEATAVGIPVVALCDSN  148 (208)
T ss_dssp             HHHHHHHHTTCCEEEEECTT
T ss_pred             HHHHHHHHCCCCEEEEECCC
T ss_conf             99999998099658872499


No 297
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=29.37  E-value=20  Score=14.72  Aligned_cols=25  Identities=16%  Similarity=0.230  Sum_probs=13.8

Q ss_pred             CCCCCEEEEECHHHHHHH-HHHHHHH
Q ss_conf             128886898511776579-9998663
Q gi|254780767|r   86 SSKPDVLLIVDNPDFTHR-VAKRVRK  110 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFnl~-lak~lkk  110 (383)
                      +.+|.++|+|--.|-||. |..+.+.
T Consensus       103 ~~~~riaIlvS~~g~~l~~ll~~~~~  128 (302)
T 3o1l_A          103 AQKKRVVLMASRESHCLADLLHRWHS  128 (302)
T ss_dssp             TSCCEEEEEECSCCHHHHHHHHHHHT
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHC
T ss_conf             66836999981898439999999877


No 298
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure initiative; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=29.15  E-value=22  Score=14.42  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHC-------CCHHHHHHHH---HHCCCEEEECCCC
Q ss_conf             357887635523-------3115668887---6275302540577
Q gi|254780767|r  262 KQVFMTCNAAMA-------ASGTVILELA---LCGIPVVSIYKSE  296 (383)
Q Consensus       262 ~~~l~~sd~ai~-------~SGTaTLE~a---l~g~P~IV~Yk~~  296 (383)
                      ...+..||+.|+       -|||+- |+.   .+|+| |++|.+.
T Consensus        64 ~~~l~~aD~via~ldg~~~D~GT~~-EiG~A~algkp-vi~~~~D  106 (162)
T 3ehd_A           64 TENVLASDLLVALLDGPTIDAGVAS-EIGVAYAKGIP-VVALYTD  106 (162)
T ss_dssp             HHHHHTCSEEEEECCSSSCCHHHHH-HHHHHHHTTCC-EEEECCC
T ss_pred             HHHHHHCCEEEEECCCCCCCCCHHH-HHHHHHHCCCE-EEEEECC
T ss_conf             9999869999998489999988899-99999986995-9999635


No 299
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=28.91  E-value=24  Score=14.16  Aligned_cols=45  Identities=16%  Similarity=0.239  Sum_probs=29.1

Q ss_pred             HHHHH-HHHHHHHHCCCCCCCEEEEECHHHHHHH--HHHHHHHHCCCCCCEEE
Q ss_conf             99999-9999986100128886898511776579--99986630134631111
Q gi|254780767|r   71 PQFIF-RINQTVELIVSSKPDVLLIVDNPDFTHR--VAKRVRKKMPNLPIINY  120 (383)
Q Consensus        71 ~~~~~-~~~~~~~~i~~~~Pd~vi~iD~pgFnl~--lak~lkk~~~~ipvi~y  120 (383)
                      |.+.+ .-+.+.+.+...++|+|++++.-|+-+-  +|..|     |+|.++.
T Consensus       112 P~~l~~lG~~lA~~~~~~~iD~Vvgv~~~GiplA~~vA~~L-----gvP~v~~  159 (291)
T 1o57_A          112 PSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYL-----NVPVVIV  159 (291)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHH-----TCCEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHH-----CCCEEEE
T ss_conf             99999999999997377899799931756699999999996-----9997999


No 300
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium} SCOP: c.56.1.2
Probab=28.74  E-value=19  Score=14.92  Aligned_cols=13  Identities=23%  Similarity=0.588  Sum_probs=7.0

Q ss_pred             CCCCCCEEEEECH
Q ss_conf             0128886898511
Q gi|254780767|r   85 VSSKPDVLLIVDN   97 (383)
Q Consensus        85 ~~~~Pd~vi~iD~   97 (383)
                      .+.+||+||.||+
T Consensus       183 ~~~kPDlVIaIDA  195 (371)
T 1c8b_A          183 KKVNPDFIIAIDA  195 (371)
T ss_dssp             HHHCCSEEEEEEE
T ss_pred             HHHCCCEEEEECH
T ss_conf             7528999999422


No 301
>2c82_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; RV2870C, DOXP/MEP pathway, oxidoreductase, isoprene biosynthesis, metal-binding; 1.9A {Mycobacterium tuberculosis} PDB: 2jd1_A* 2jcv_A* 2jcz_A* 2jd2_A 2jcx_A* 2jcy_A 2jd0_A*
Probab=28.61  E-value=25  Score=14.12  Aligned_cols=28  Identities=14%  Similarity=0.167  Sum_probs=19.2

Q ss_pred             CCCCCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             0784261242054898999999999844
Q gi|254780767|r  318 VDYPLVPEYFNSMIRSEALVRWIERLSQ  345 (383)
Q Consensus       318 ~~~~ivPEliQ~~~~~~~i~~~~~~ll~  345 (383)
                      +|+..|--|++++..--.|.+-+.+.++
T Consensus       329 ANEvAV~~FL~~kI~F~dI~~iI~~vL~  356 (413)
T 2c82_A          329 ANEEAAAAFLAGRIGFPAIVGIIADVLH  356 (413)
T ss_dssp             HHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             9799999999589986789999999998


No 302
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens}
Probab=28.38  E-value=17  Score=15.17  Aligned_cols=13  Identities=15%  Similarity=0.245  Sum_probs=4.5

Q ss_pred             HHHHHHCCCCCEE
Q ss_conf             9876402735126
Q gi|254780767|r  217 VASLVKRNPFFRF  229 (383)
Q Consensus       217 ~~~l~~~~~~~~~  229 (383)
                      ++.+.+.+|+.++
T Consensus        98 ~~~~~e~~~~~~I  110 (278)
T 3fdj_A           98 RAVYLEEHPQAKV  110 (278)
T ss_dssp             HHHHHTTCTTCEE
T ss_pred             HHHHHHHCCCCEE
T ss_conf             9988866799749


No 303
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=28.23  E-value=25  Score=14.08  Aligned_cols=98  Identities=16%  Similarity=0.331  Sum_probs=59.5

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      |||.|-=-...|    =.+.++|++..| +.++..+|...=-..|-++.            |      .+.+...+..++
T Consensus         1 mkIgvfDSGiGG----ltv~~~l~~~~p-~~~~iy~~D~~~~PYG~ks~------------e------~i~~~~~~~~~~   57 (254)
T 1b73_A            1 MKIGIFDSGVGG----LTVLKAIRNRYR-KVDIVYLGDTARVPYGIRSK------------D------TIIRYSLECAGF   57 (254)
T ss_dssp             CEEEEEESSSGG----GTHHHHHHHHST-TCEEEEEECTTTCCCTTSCH------------H------HHHHHHHHHHHH
T ss_pred             CEEEEEECCCCH----HHHHHHHHHHCC-CCCEEEEECCCCCCCCCCCH------------H------HHHHHHHHHHHH
T ss_conf             979999489867----999999999789-99889994688899998999------------9------999999999999


Q ss_pred             CCCCCCCEEEEE-CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf             001288868985-11776579999866301346311110022110
Q gi|254780767|r   84 IVSSKPDVLLIV-DNPDFTHRVAKRVRKKMPNLPIINYVCPSVWA  127 (383)
Q Consensus        84 i~~~~Pd~vi~i-D~pgFnl~lak~lkk~~~~ipvi~yv~PqvWA  127 (383)
                      +.+.++|++|.- -.....  ....+++. +.+|+++.+.|.+.+
T Consensus        58 L~~~~~~~IviaCNTa~a~--~~~~l~~~-~~ipvi~ii~~~~~~   99 (254)
T 1b73_A           58 LKDKGVDIIVVACNTASAY--ALERLKKE-INVPVFGVIEPGVKE   99 (254)
T ss_dssp             HHTTTCSEEEECCHHHHTT--SHHHHHHH-SSSCEEESHHHHHHH
T ss_pred             HHHCCCCEEEEECCCHHHH--HHHHHHHH-CCCCEEECCCHHHHH
T ss_conf             9976999999937857899--99999986-379876056287999


No 304
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=28.05  E-value=25  Score=14.06  Aligned_cols=37  Identities=8%  Similarity=0.272  Sum_probs=26.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |++||=-+++|-..  ..|+.|++.|.++ +.++++.++.
T Consensus         1 m~~~k~ILITG~tG--fiG~~l~~~Ll~~-g~~v~v~~~d   37 (348)
T 1oc2_A            1 MSQFKNIIVTGGAG--FIGSNFVHYVYNN-HPDVHVTVLD   37 (348)
T ss_dssp             --CCSEEEEETTTS--HHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred             CCCCCEEEEECCCC--HHHHHHHHHHHHC-CCCEEEEEEE
T ss_conf             99998899947886--8999999999977-9973999983


No 305
>1wb0_A Chitinase 1, chitotriosidase 1; hydrolase, human chitinase, argadin, cyclopentapeptide inhibitors, chitinase inhibitors, alternative splicing; HET: RAG; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=27.98  E-value=25  Score=14.05  Aligned_cols=159  Identities=16%  Similarity=0.144  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHCCCCEEE-EEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             789999999999738998399-9971789994788065044453110136746645999999999986100128886898
Q gi|254780767|r   16 DLLAGDLIKSLKEMVSYPINL-VGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLI   94 (383)
Q Consensus        16 D~~~a~li~~Lk~~~~~~~~~-~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~   94 (383)
                      |...-.-+.+||++ ++++++ ..|||-...              .-+|.+++..--.-.+..+.+++.+++++.|-|-+
T Consensus        52 d~~~~~~~~~Lk~~-np~lKvllsiGGw~~~--------------s~~Fs~~a~~~~~R~~Fi~s~v~~l~~~~fDGiDi  116 (445)
T 1wb0_A           52 DETLYQEFNGLKKM-NPKLKTLLAIGGWNFG--------------TQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDL  116 (445)
T ss_dssp             HHHHHHHHHHGGGT-CTTCEEEEEEECTTTC--------------SHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CHHHHHHHHHHHHH-CCCCEEEEEEECCCCC--------------CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             18899999999986-8997699999389778--------------70687886699999999999999999829983772


Q ss_pred             -E-----------CHHHHHHHHHHHHHHHC------CCCC---CEEEECCCCCCCC-CCCHHHHHHHHHHHCCCCCCCHH
Q ss_conf             -5-----------11776579999866301------3463---1111002211003-66355799999864015677422
Q gi|254780767|r   95 -V-----------DNPDFTHRVAKRVRKKM------PNLP---IINYVCPSVWAWR-EGRARKMCAYINQVISILPFEKE  152 (383)
Q Consensus        95 -i-----------D~pgFnl~lak~lkk~~------~~ip---vi~yv~PqvWAWr-~~R~k~~~~~~d~~~~ifpFE~~  152 (383)
                       -           |...|.. +-+.+|...      .+.+   +.--+++.-|-+. ...++.+.+++|.+-..-     
T Consensus       117 DWEyP~~~g~~~~D~~nf~~-ll~elr~~l~~~~~~~~~~~~~ls~avp~~~~~~~~~yd~~~i~~~vD~invMt-----  190 (445)
T 1wb0_A          117 DWEYPGSQGSPAVDKERFTT-LVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMA-----  190 (445)
T ss_dssp             ECSCTTSTTCCTTHHHHHHH-HHHHHHHHHHHHHHHHCSCCCEEEEEECCCHHHHHHHCCHHHHHHHCSEEEECC-----
T ss_pred             CCCCCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCHHHHHHHCCEEEEEE-----
T ss_conf             25135446888015677999-999999999998876177762278870587177662131454432146578986-----


Q ss_pred             HHHCCCCCCEEECCC--CCCCCCCC--------CCCHHHHHHHCCCCCCCCEEEE
Q ss_conf             320025531476388--21122100--------1355888976187655650599
Q gi|254780767|r  153 VMQRLGGPPTTFVGH--PLSSSPSI--------LEVYSQRNKQRNTPSQWKKILL  197 (383)
Q Consensus       153 ~f~k~~~~~~~fVGH--Pl~d~~~~--------~~~~~~~~~~~~~~~~~~~I~l  197 (383)
                       |+ ++|.-..++||  ||......        ....-......+.++++-++++
T Consensus       191 -YD-~~g~w~~~tg~~spLy~~~~~~~~~~~~~v~~~v~~~~~~G~p~~KlvlGi  243 (445)
T 1wb0_A          191 -YD-FHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGM  243 (445)
T ss_dssp             -CC-SSCTTSSBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             -EC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             -31-467777778888867788555687777558488899997499832479987


No 306
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.87  E-value=25  Score=14.04  Aligned_cols=31  Identities=19%  Similarity=0.350  Sum_probs=23.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             599997682147899999999997389983999971
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+.+++|-.||  .|..+.+.|-+. +  .++...+
T Consensus         6 K~~lVTG~s~G--IG~aia~~la~~-G--a~V~~~~   36 (245)
T 1uls_A            6 KAVLITGAAHG--IGRATLELFAKE-G--ARLVACD   36 (245)
T ss_dssp             CEEEEESTTSH--HHHHHHHHHHHT-T--CEEEEEE
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC-C--CEEEEEE
T ss_conf             89999377878--999999999987-9--9999997


No 307
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=27.85  E-value=25  Score=14.04  Aligned_cols=14  Identities=14%  Similarity=0.197  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHCCHH
Q ss_conf             99999999844989
Q gi|254780767|r  335 ALVRWIERLSQDTL  348 (383)
Q Consensus       335 ~i~~~~~~ll~d~~  348 (383)
                      .+...+.++-.+++
T Consensus       429 dl~~~~~e~~~~~~  442 (497)
T 3mc6_A          429 ILRTTVQELKSESN  442 (497)
T ss_dssp             HHHHHHHHHTCC--
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999983747


No 308
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.63  E-value=26  Score=14.01  Aligned_cols=94  Identities=14%  Similarity=0.086  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHCCC-CEEEEEECCHHHH-------HCCCEEEECH--HHCCEEEHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             78999999999973899-8399997178999-------4788065044--453110136746645999999999986100
Q gi|254780767|r   16 DLLAGDLIKSLKEMVSY-PINLVGVGGPSLQ-------KEGLVSLFDF--SELSVIGIMQVVRHLPQFIFRINQTVELIV   85 (383)
Q Consensus        16 D~~~a~li~~Lk~~~~~-~~~~~giGG~~m~-------~~G~~~~~~~--~~l~v~G~~evl~~~~~~~~~~~~~~~~i~   85 (383)
                      |.+|-...-.||++.+. .+....+|++.-+       +-|.+.-+.+  .+...-|. +.+.    .-+   -+...++
T Consensus        39 D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alamGad~a~~i~~~~~~~~~~-d~~~----ta~---~la~~~~  110 (252)
T 1efp_B           39 DEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDI-EPLA----VAK---ILAAVAR  110 (252)
T ss_dssp             HHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHHTCSEEEEEECCSSTTCCC-CHHH----HHH---HHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-CHHH----HHH---HHHHHHH
T ss_conf             6999999999754279809999996637879999988623798269999245346677-8999----999---9999987


Q ss_pred             CCCCCEEEE----ECHH--HHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf             128886898----5117--765799998663013463111100
Q gi|254780767|r   86 SSKPDVLLI----VDNP--DFTHRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        86 ~~~Pd~vi~----iD~p--gFnl~lak~lkk~~~~ipvi~yv~  122 (383)
                      ...||+|++    +|.-  -.--.+|.+|     |+|.+-||.
T Consensus       111 ~~~~DLIl~G~~s~D~~~g~vg~~lAe~L-----g~P~vt~v~  148 (252)
T 1efp_B          111 AEGTELIIAGKQAIDNDMNATGQMLAAIL-----GWAQATFAS  148 (252)
T ss_dssp             HHTCSEEEEESCCTTTCCCCHHHHHHHHH-----TCEEEEEEE
T ss_pred             HCCCCEEEEEEECCCCCCCCCCHHHHHHC-----CCCCEEEEE
T ss_conf             41999999983256678884216889762-----898135789


No 309
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=27.57  E-value=21  Score=14.55  Aligned_cols=12  Identities=17%  Similarity=0.196  Sum_probs=4.6

Q ss_pred             HHHHHHHHHHHH
Q ss_conf             765799998663
Q gi|254780767|r   99 DFTHRVAKRVRK  110 (383)
Q Consensus        99 gFnl~lak~lkk  110 (383)
                      ||.-.+.|.+.+
T Consensus       143 ~~gr~~rkav~~  154 (538)
T 1yvr_A          143 MWGRALRKAVSD  154 (538)
T ss_dssp             -CCHHHHHHHHH
T ss_pred             CCCHHHHHHHHH
T ss_conf             523899999999


No 310
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,, transport protein; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=27.48  E-value=26  Score=14.00  Aligned_cols=84  Identities=18%  Similarity=0.275  Sum_probs=47.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHC--CCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             459999768214789999999999738--998399997178999478806504445311013674664599999999998
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMV--SYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~--~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      -||-++.= ...|-+-+.+.+.+++..  ..++++....+..          |.                   ....+..
T Consensus         3 ~kIgv~~~-~~~~~f~~~~~~g~~~~a~~~~~~~l~~~~~~~----------d~-------------------~~q~~~i   52 (309)
T 2fvy_A            3 TRIGVTIY-KYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQN----------DQ-------------------SKQNDQI   52 (309)
T ss_dssp             EEEEEEES-CTTSHHHHHHHHHHHHHHHTCTTEEEEEEECTT----------CH-------------------HHHHHHH
T ss_pred             CEEEEEEC-CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----------CH-------------------HHHHHHH
T ss_conf             88999978-998989999999999999876992899975999----------99-------------------9999999


Q ss_pred             HHCCCCCCCEEEE--ECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             6100128886898--51177657999986630134631111
Q gi|254780767|r   82 ELIVSSKPDVLLI--VDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        82 ~~i~~~~Pd~vi~--iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      +.+...+||.+|+  +|...+. ...++++++  |||++.+
T Consensus        53 ~~~i~~~vD~iiv~~~d~~~~~-~~l~~a~~~--gipvv~~   90 (309)
T 2fvy_A           53 DVLLAKGVKALAINLVDPAAAG-TVIEKARGQ--NVPVVFF   90 (309)
T ss_dssp             HHHHHTTCSEEEECCSSGGGHH-HHHHHHHTT--TCCEEEE
T ss_pred             HHHHHCCCCEEEECCCCHHHHH-HHHHHHHHC--CCCEEEE
T ss_conf             9999769999996674224159-999999986--9978996


No 311
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; X-RAY, aspartate aminotransferase, colitose, perosamine, O- antigen, PLP; HET: G4M; 1.70A {Escherichia coli O55} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=27.30  E-value=14  Score=15.66  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=26.3

Q ss_pred             CCCCCCEEEEECHHHHHH---HHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf             012888689851177657---9999866301346311110022110
Q gi|254780767|r   85 VSSKPDVLLIVDNPDFTH---RVAKRVRKKMPNLPIINYVCPSVWA  127 (383)
Q Consensus        85 ~~~~Pd~vi~iD~pgFnl---~lak~lkk~~~~ipvi~yv~PqvWA  127 (383)
                      ...++++||.|..-|..-   .|.+.+++.  ++++|-=.|-..-+
T Consensus       125 i~~~tkaIi~vh~~G~~~d~~~I~~i~~~~--~i~vIEDaAqa~G~  168 (390)
T 3b8x_A          125 VTDSTKAILTVNLLGNPNNFDEINKIIGGR--DIILLEDNCESMGA  168 (390)
T ss_dssp             CCTTEEEEEEECGGGCCCCHHHHHHHHTTS--CCEEEEECTTCTTC
T ss_pred             HCCCCEEEEEECCCCCCCCHHHHHHHHHHC--CCEEECCCHHCCCC
T ss_conf             424870533005678846789999999872--98577013014587


No 312
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=27.17  E-value=26  Score=13.96  Aligned_cols=36  Identities=6%  Similarity=-0.028  Sum_probs=21.4

Q ss_pred             CCCCCEEEEECHHHH-HHHHHHHHHHHCCCCCCEEEEC
Q ss_conf             128886898511776-5799998663013463111100
Q gi|254780767|r   86 SSKPDVLLIVDNPDF-THRVAKRVRKKMPNLPIINYVC  122 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgF-nl~lak~lkk~~~~ipvi~yv~  122 (383)
                      ..+|-++++.--||+ |+- ..-.-....++|++...+
T Consensus        66 tg~~~v~~~tsGpg~~N~~-~al~eA~~~~~Pll~It~  102 (589)
T 2pgn_A           66 KDRSAAVGAWHCVGNLLLH-AAMQEARTGRIPAVHIGL  102 (589)
T ss_dssp             HTSCCEEEEEEGGGGGGCH-HHHHHHHHTTCCEEEEEE
T ss_pred             HCCCEEEECCCCHHHHHHH-HHHHHHHHHCCCEEEEEC
T ss_conf             6998899917788999999-999998664798899968


No 313
>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440}
Probab=27.05  E-value=25  Score=14.08  Aligned_cols=14  Identities=14%  Similarity=0.097  Sum_probs=4.6

Q ss_pred             CHHHHHHHHHHHHH
Q ss_conf             11776579999866
Q gi|254780767|r   96 DNPDFTHRVAKRVR  109 (383)
Q Consensus        96 D~pgFnl~lak~lk  109 (383)
                      |.|.+---+...++
T Consensus        15 D~~~~r~~l~~~L~   28 (136)
T 3hdv_A           15 DNAVNREALILYLK   28 (136)
T ss_dssp             SCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
T ss_conf             99999999999999


No 314
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural genomics, JCSG, protein structure initiative, PSI; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=26.84  E-value=26  Score=13.92  Aligned_cols=42  Identities=14%  Similarity=0.307  Sum_probs=24.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
Q ss_conf             987459999768214789999999999738998399997178999478
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEG   48 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G   48 (383)
                      |++|||+|+-..  |=-||  ++.+|++. +.. -+..-|-+.|+..+
T Consensus        13 ~~~~rVLviGsG--gREHA--ia~~l~~s-~~~-v~~~pgN~g~~~~~   54 (412)
T 1vkz_A           13 MKAVRVHILGSG--GREHA--IGWAFAKQ-GYE-VHFYPGNAGTKRDG   54 (412)
T ss_dssp             ---CEEEEEECS--HHHHH--HHHHHHHT-TCE-EEEEECCTTGGGTS
T ss_pred             HHCCEEEEECCC--HHHHH--HHHHHHCC-CCC-EEEECCCHHHHHHC
T ss_conf             426789999978--89999--99998569-980-89968987887425


No 315
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* 3jq7_A* 3jq8_A* ...
Probab=26.75  E-value=27  Score=13.91  Aligned_cols=31  Identities=16%  Similarity=0.172  Sum_probs=22.6

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             599997682147899999999997389983999971
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+.+++|-.||  .|..+.+.|-+. +  .++...+
T Consensus        24 kvAlITGas~G--IG~aiA~~la~~-G--a~Vvi~~   54 (288)
T 2x9g_A           24 PAAVVTGAAKR--IGRAIAVKLHQT-G--YRVVIHY   54 (288)
T ss_dssp             CEEEETTCSSH--HHHHHHHHHHHH-T--CEEEEEE
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC-C--CEEEEEE
T ss_conf             98999586878--999999999987-9--9899996


No 316
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber dsm 13855}
Probab=26.51  E-value=27  Score=13.88  Aligned_cols=33  Identities=18%  Similarity=0.408  Sum_probs=18.6

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCC-CCEEEEEEC
Q ss_conf             4599997682147899999999997389-983999971
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVS-YPINLVGVG   40 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~-~~~~~~giG   40 (383)
                      |||-|+ | + |. .|+.+.-.|+...- .++-++-+-
T Consensus         1 mKV~Ii-G-a-G~-VG~~~a~~l~~~~~~~el~L~Di~   34 (314)
T 3nep_X            1 MKVTVI-G-A-GN-VGATVAECVARQDVAKEVVMVDIK   34 (314)
T ss_dssp             CEEEEE-C-C-SH-HHHHHHHHHHHHTCSSEEEEECSS
T ss_pred             CEEEEE-C-C-CH-HHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             979999-9-6-98-999999999837999869997689


No 317
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=26.44  E-value=27  Score=13.87  Aligned_cols=90  Identities=12%  Similarity=0.116  Sum_probs=49.2

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             87459999768214789999999999738998399997178999478806504445311013674664599999999998
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTV   81 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~   81 (383)
                      .|++|-++....+.+- -+.+.+.+++.              .++.|.+..+-..+      .+.        ....+..
T Consensus         1 ~p~~Ig~~~~~~~~~~-~~~~~~~~~~~--------------a~~~G~~~~~~~~~------~~~--------~~q~~~i   51 (306)
T 2vk2_A            1 APLTVGFSQVGSESGW-RAAETNVAKSE--------------AEKRGITLKIADGQ------QKQ--------ENQIKAV   51 (306)
T ss_dssp             -CCEEEEEECCCCSHH-HHHHHHHHHHH--------------HHHHTCEEEEEECT------TCH--------HHHHHHH
T ss_pred             CCEEEEEEECCCCCHH-HHHHHHHHHHH--------------HHHCCCEEEEEECC------CCH--------HHHHHHH
T ss_conf             9879999979998899-99999999999--------------99869989999599------999--------9999999


Q ss_pred             HHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf             61001288868985--1177657999986630134631111002
Q gi|254780767|r   82 ELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVCP  123 (383)
Q Consensus        82 ~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~P  123 (383)
                      +.+.+.+||.+|++  |..... ...+++++.  |||++.+-.+
T Consensus        52 ~~li~~~vDgIii~~~~~~~~~-~~i~~a~~~--gipvv~~d~~   92 (306)
T 2vk2_A           52 RSFVAQGVDAIFIAPVVATGWE-PVLKEAKDA--EIPVFLLDRS   92 (306)
T ss_dssp             HHHHHHTCSEEEECCSSSSSCH-HHHHHHHHT--TCCEEEESSC
T ss_pred             HHHHHCCCCEEEECCCCCHHHH-HHHHHHHHC--CCEEEEECCC
T ss_conf             9999769899999078821159-999999976--9819998145


No 318
>2etv_A Iron(III) ABC transporter, periplasmic iron- binding protein, putative; TM0189, structural genomics; HET: MLY; 1.70A {Thermotoga maritima MSB8} SCOP: c.92.2.4
Probab=26.32  E-value=27  Score=13.86  Aligned_cols=65  Identities=15%  Similarity=0.190  Sum_probs=35.9

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH
Q ss_conf             861001288868985117765799998663013463111100221100366355799999864015677422
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKE  152 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~  152 (383)
                      .+.+.+-+||+||.-++..  -.....++..  |||++..-..   .+...+...+.+.+..+--+|--|.+
T Consensus        89 ~E~il~l~PDlVi~~~~~~--~~~~~~l~~~--gipvv~~~~~---~~~~~~~~~~~~~i~~lg~i~g~e~~  153 (346)
T 2etv_A           89 LESLITLQPDVVFITYVDR--XTAXDIQEXT--GIPVVVLSYG---NLGTFEDEDLFRSIELAGXILGREER  153 (346)
T ss_dssp             HHHHHHHCCSEEEEESCCH--HHHHHHHHHH--TSCEEEECCC---CTTCSCCHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHCCCCCEEEECCCCC--HHHHHHHHHC--CCCEEEECCC---CCCCCCHHHHHHHHHHHCCCCCCCHH
T ss_conf             9999708997999578774--0366676522--8973651368---76768999999999986331189179


No 319
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD- dependent, metal-binding, NAD, NADP, oxidoreductase, pyridoxine biosynthesis; HET: SUC; 1.70A {Yersinia pestis} PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=26.30  E-value=27  Score=13.86  Aligned_cols=101  Identities=20%  Similarity=0.316  Sum_probs=55.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHH-----HHCCCEEEE---C---------HHHCCEE------
Q ss_conf             5999976821478999999999973899839999717899-----947880650---4---------4453110------
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSL-----QKEGLVSLF---D---------FSELSVI------   61 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m-----~~~G~~~~~---~---------~~~l~v~------   61 (383)
                      ||.|+.|+++|=  |..++-.+... +...++.-+|.+..     +..|++.-+   +         ...+.+.      
T Consensus        10 rIaIT~GDPaGI--GpEIilk~~~~-~~~~~~iiigd~~~l~~~~~~l~~~~~~~~i~~~~~~~~~~~~~l~v~~~~~~~   86 (334)
T 3lxy_A           10 RLVITPGEPAGV--GPDLAITLAQQ-DWPVELVVCADPALLLARASQLNLPLQLREYQADQPAIAQQAGSLTILPVKTAV   86 (334)
T ss_dssp             EEEEECCCTTSS--HHHHHHHHTTS-CCSSEEEEEECHHHHHHHHHHTTCCCEEEECCTTSCCCCCCTTEEEEEECCCSS
T ss_pred             CEEEECCCCCHH--HHHHHHHHHHC-CCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCEEEECCCCCC
T ss_conf             589975887541--79999999716-799986999899999999997599961788478513221467833540012356


Q ss_pred             ----EHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE------------ECHHHHHHHHHHHHH
Q ss_conf             ----136746645999999999986100128886898------------511776579999866
Q gi|254780767|r   62 ----GIMQVVRHLPQFIFRINQTVELIVSSKPDVLLI------------VDNPDFTHRVAKRVR  109 (383)
Q Consensus        62 ----G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~------------iD~pgFnl~lak~lk  109 (383)
                          |-.+ -.+-......++...+.+++.+.|++|+            .+|||..--||+..+
T Consensus        87 ~~~~G~~~-~~~g~~~~~~l~~A~~~~~~g~~daiVT~PInK~~i~~aG~~f~GHTE~la~~~~  149 (334)
T 3lxy_A           87 NVVPGKLD-VGNSHYVVETLAKACDGAISGEFAALVTGPVQKSIINDAGIPFIGHTEFFADRSH  149 (334)
T ss_dssp             CCCTTCCC-GGGHHHHHHHHHHHHHHHHHTSSSCEEECCCCHHHHHHTTCCCSCHHHHHHHHHT
T ss_pred             CCCCCCCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf             57889757-3233899999999998853241048997761256676438885873456530027


No 320
>2qk4_A Trifunctional purine biosynthetic protein adenosine-3; purine synthesis, enzyme, protein-ATP complex, structural genomics; HET: ATP; 2.45A {Homo sapiens}
Probab=25.66  E-value=28  Score=13.78  Aligned_cols=87  Identities=13%  Similarity=0.219  Sum_probs=45.5

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCE-EEEE-ECCHHHHHCCCEEE--ECHHHCCEEEHHHHHHHHHHHHHHHHH
Q ss_conf             4599997682147899999999997389983-9999-71789994788065--044453110136746645999999999
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPI-NLVG-VGGPSLQKEGLVSL--FDFSELSVIGIMQVVRHLPQFIFRINQ   79 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~-~~~g-iGG~~m~~~G~~~~--~~~~~l~v~G~~evl~~~~~~~~~~~~   79 (383)
                      +||+|+...  |--|  .+..+|++  .+.+ +++- -|-+.+.......-  .++.+                   ...
T Consensus        25 ~KILviGsG--gREh--Aia~~l~~--s~~~~~v~~~pgN~g~~~~~~~~~~~i~~~d-------------------~~~   79 (452)
T 2qk4_A           25 ARVLIIGSG--GREH--TLAWKLAQ--SHHVKQVLVAPGNAGTACSEKISNTAISISD-------------------HTA   79 (452)
T ss_dssp             EEEEEEECS--HHHH--HHHHHHTT--CTTEEEEEEEECCGGGSBSSSEEECCCCSSC-------------------HHH
T ss_pred             CEEEEECCC--HHHH--HHHHHHHH--CCCCCEEEEECCCHHHHCCCCCCCCCCCCCC-------------------HHH
T ss_conf             779999978--8999--99999985--9898889997898798500431234658679-------------------999


Q ss_pred             HHHHCCCCCCCEEEE-ECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             986100128886898-511776579999866301346311
Q gi|254780767|r   80 TVELIVSSKPDVLLI-VDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~-iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                      +.+.+++++||.||. -..| ...-++-.+++.  |+|++
T Consensus        80 i~~~~~~~~iDlvivGpE~p-L~~Gl~D~l~~~--gi~vf  116 (452)
T 2qk4_A           80 LAQFCKEKKIEFVVVGPEAP-LAAGIVGNLRSA--GVQCF  116 (452)
T ss_dssp             HHHHHHHHTCCEEEECSSHH-HHTTHHHHHHHT--TCCEE
T ss_pred             HHHHHHHHCCCEEEECCCHH-HHHHHHHHHHHC--CCCEE
T ss_conf             99999985999999897389-898899999867--99443


No 321
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=25.64  E-value=28  Score=13.78  Aligned_cols=52  Identities=4%  Similarity=0.115  Sum_probs=29.9

Q ss_pred             CCCCEEEEEECCCCHHHH----HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCC
Q ss_conf             987459999768214789----99999999973899839999717899947880650444531
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLL----AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELS   59 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~----~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~   59 (383)
                      |++ ||+|+.|-+..+-.    +...+++|++. +.++++.=+     -+.+++...+..++.
T Consensus         1 ~~K-KvLII~aHP~~~S~~~al~~~~~~~l~~~-G~eV~v~DL-----y~~~f~P~l~~~d~~   56 (273)
T 1d4a_A            1 VGR-RALIVLAHSERTSFNYAMKEAAAAALKKK-GWEVVESDL-----YAMNFNPIISRKDIT   56 (273)
T ss_dssp             CCC-EEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEET-----TTTTCCCCCCGGGBC
T ss_pred             CCC-EEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCEEEEEEC-----CCCCCCCCCCHHHHH
T ss_conf             986-59999818998557999985107899978-997999987-----336899867989984


No 322
>1pt6_A Integrin alpha-1; X-RAY diffraction, cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=25.50  E-value=28  Score=13.76  Aligned_cols=12  Identities=17%  Similarity=0.672  Sum_probs=7.4

Q ss_pred             CCCEEEEECHHH
Q ss_conf             888689851177
Q gi|254780767|r   88 KPDVLLIVDNPD   99 (383)
Q Consensus        88 ~Pd~vi~iD~pg   99 (383)
                      +-|+++++|..|
T Consensus         7 ~~DivfvlD~S~   18 (213)
T 1pt6_A            7 QLDIVIVLDGSN   18 (213)
T ss_dssp             CEEEEEEEECCT
T ss_pred             CEEEEEEEECCC
T ss_conf             448999997988


No 323
>3ofo_B 30S ribosomal protein S2; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_B* 2wwl_B 3ofp_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B 1vs5_B 3i1o_B 3i1q_B 3i1s_B 3i1z_B 3i21_B 3kc4_B 3or9_B 3ora_B 2qal_B* 1p87_B 2aw7_B 2avy_B ...
Probab=25.24  E-value=28  Score=13.73  Aligned_cols=19  Identities=37%  Similarity=0.496  Sum_probs=14.5

Q ss_pred             HHHHHHHHCCCEEEECCCC
Q ss_conf             6688876275302540577
Q gi|254780767|r  278 VILELALCGIPVVSIYKSE  296 (383)
Q Consensus       278 aTLE~al~g~P~IV~Yk~~  296 (383)
                      |-.||..+|+|+|-+-.++
T Consensus       164 ai~Ea~~l~IPvI~ivDTn  182 (218)
T 3ofo_B          164 AIKEANNLGIPVFAIVDTN  182 (218)
T ss_dssp             HHHHHHHTTCCEEEECCTT
T ss_pred             HHHHHHHCCCCEEEEEECC
T ss_conf             9999998599779985079


No 324
>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, T protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A*
Probab=25.20  E-value=28  Score=13.73  Aligned_cols=28  Identities=25%  Similarity=0.418  Sum_probs=16.0

Q ss_pred             HHHCCCCCCCEEEEECHHHHHHHHHHHHHH
Q ss_conf             861001288868985117765799998663
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRK  110 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk  110 (383)
                      .+.|..-+||++|.-.+.+  -.....+.+
T Consensus        78 ~E~i~~l~PDlii~~~~~~--~~~~~~~~~  105 (296)
T 3lhs_A           78 LEEISKLKPDLIIADSSRH--KGINKELNK  105 (296)
T ss_dssp             HHHHHHTCCSEEEEETTTT--TTTHHHHHH
T ss_pred             HHHHHCCCCCEEEECCCCC--HHHHHHHHH
T ss_conf             9999627999999648875--146788861


No 325
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=25.12  E-value=28  Score=13.72  Aligned_cols=24  Identities=17%  Similarity=0.418  Sum_probs=16.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             8745999976821478999999999973
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEM   29 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~   29 (383)
                      ++|||-|+ |  .|. .|+.+.-.|...
T Consensus         4 ~~~KV~Ii-G--aG~-VG~~~a~~l~~~   27 (318)
T 1ez4_A            4 NHQKVVLV-G--DGA-VGSSYAFAMAQQ   27 (318)
T ss_dssp             TBCEEEEE-C--CSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEE-C--CCH-HHHHHHHHHHHC
T ss_conf             99879998-9--798-999999999827


No 326
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} SCOP: d.159.1.7
Probab=25.05  E-value=18  Score=15.02  Aligned_cols=36  Identities=17%  Similarity=0.087  Sum_probs=18.9

Q ss_pred             CCCCEEEEEECCCCHHHHHH--HHHHHHHHHCCCCEEEEEECCH
Q ss_conf             98745999976821478999--9999999738998399997178
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAG--DLIKSLKEMVSYPINLVGVGGP   42 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a--~li~~Lk~~~~~~~~~~giGG~   42 (383)
                      |++|||.|++     |.||-  .|=+.+... ..+++..-..|+
T Consensus         4 m~~~kI~viS-----D~Hgn~~al~~vl~~~-~~~~D~iih~GD   41 (176)
T 3ck2_A            4 MAKQTIIVMS-----DSHGDSLIVEEVRDRY-VGKVDAVFHNGD   41 (176)
T ss_dssp             CCCEEEEEEC-----CCTTCHHHHHHHHHHH-TTTSSEEEECSC
T ss_pred             CCCCEEEEEE-----CCCCCHHHHHHHHHHH-HCCCCEEEECCC
T ss_conf             5478999990-----0689989999999997-779999998998


No 327
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 2hl1_A*
Probab=24.98  E-value=18  Score=14.99  Aligned_cols=70  Identities=16%  Similarity=0.301  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEE---------CHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf             99999999861001288868985---------11776579999866301--34631111002211003663557999998
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIV---------DNPDFTHRVAKRVRKKM--PNLPIINYVCPSVWAWREGRARKMCAYIN  141 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~i---------D~pgFnl~lak~lkk~~--~~ipvi~yv~PqvWAWr~~R~k~~~~~~d  141 (383)
                      +.+...++.+...+.+.+.+|+=         -+|++-+.+.+.+....  -|..|.                       
T Consensus        57 v~~av~eI~~~a~kv~~~~ivlYPyAHLSs~La~P~~A~~vL~~le~~L~~~g~eV~-----------------------  113 (143)
T 2hl0_A           57 SLKAIEEISKVAEQVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKERGFNVG-----------------------  113 (143)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHHTTCEEE-----------------------
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE-----------------------
T ss_conf             999999999999864998799937111168778968999999999999985896599-----------------------


Q ss_pred             HHCCCCCCCHHHHHCCCCCCEEECCCCCCCCCC
Q ss_conf             640156774223200255314763882112210
Q gi|254780767|r  142 QVISILPFEKEVMQRLGGPPTTFVGHPLSSSPS  174 (383)
Q Consensus       142 ~~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~~~  174 (383)
                          --||  -||+.+   +.+.-||||.+...
T Consensus       114 ----raPF--GwyK~F---~i~ckGHPLsElSr  137 (143)
T 2hl0_A          114 ----KAPF--GYYKAF---KISCKGHPLAELSR  137 (143)
T ss_dssp             ----ECCS--SEEEEE---EEEECCCTTSEEEE
T ss_pred             ----EECC--CCEEEE---EEEECCCCHHHHCC
T ss_conf             ----8176--220447---98845750799520


No 328
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, malate dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=24.61  E-value=29  Score=13.66  Aligned_cols=62  Identities=15%  Similarity=0.209  Sum_probs=28.2

Q ss_pred             CCCCCEEEEECH-----------HHHHHHHHHHH-HHHCCCC------CCEEEE---------CCCCCCCCCCCHH--H-
Q ss_conf             128886898511-----------77657999986-6301346------311110---------0221100366355--7-
Q gi|254780767|r   86 SSKPDVLLIVDN-----------PDFTHRVAKRV-RKKMPNL------PIINYV---------CPSVWAWREGRAR--K-  135 (383)
Q Consensus        86 ~~~Pd~vi~iD~-----------pgFnl~lak~l-kk~~~~i------pvi~yv---------~PqvWAWr~~R~k--~-  135 (383)
                      ....+++|.-|.           -|.-+.++|.+ -+..-||      |++-=+         -|-.--||+.|++  . 
T Consensus       168 ~~~v~viVVTDG~rILGLGDlG~~gm~I~vGK~~Ly~~~aGI~P~~~lPI~LDvGTnn~~Ll~Dp~YlG~r~~Rv~g~~y  247 (605)
T 1o0s_A          168 EEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDY  247 (605)
T ss_dssp             CSCCCEEEEECSSCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHH
T ss_pred             CCCCEEEEEECCCCEEECCCCCCCCCCCEEEHHHHHHHHCCCCHHHCCCEEECCCCCHHHHCCCCHHHCCCCCCCCCCCH
T ss_conf             66825999966710331467787644521136876666359887654775643788627651473431345555663348


Q ss_pred             ---HHHHHHHHCCCC
Q ss_conf             ---999998640156
Q gi|254780767|r  136 ---MCAYINQVISIL  147 (383)
Q Consensus       136 ---~~~~~d~~~~if  147 (383)
                         +.+++..+...|
T Consensus       248 d~~idefv~av~~~~  262 (605)
T 1o0s_A          248 DTLLDNFMKACTKKY  262 (605)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999999861


No 329
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=24.50  E-value=29  Score=13.64  Aligned_cols=81  Identities=19%  Similarity=0.174  Sum_probs=42.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC--HHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHH---HHHH
Q ss_conf             45999976821478999999999973899839999717--899947880650444531101367466459999---9999
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG--PSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFI---FRIN   78 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG--~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~---~~~~   78 (383)
                      |||.+.+   |+| .|...+++|.+.   +.++.||--  ++-...+..  .++.+++--      .++|.+.   -.-.
T Consensus         1 Mkiv~~~---~~~-~~~~~l~~L~~~---~~~i~~V~t~~~~~~~~~~~--~~v~~~a~~------~~ip~~~~~~~~~~   65 (305)
T 2bln_A            1 MKTVVFA---YHD-MGCLGIEALLAA---GYEISAIFTHTDNPGEKAFY--GSVARLAAE------RGIPVYAPDNVNHP   65 (305)
T ss_dssp             CEEEEEE---CHH-HHHHHHHHHHHT---TCEEEEEECCCC------CC--CCHHHHHHH------HTCCEECCSCCCSH
T ss_pred             CEEEEEC---CCH-HHHHHHHHHHHC---CCCEEEEEECCCCCCCCCCC--CHHHHHHHH------CCCCEECCCCCCCH
T ss_conf             9599992---778-999999999978---99889999089999887898--989999998------69989845989989


Q ss_pred             HHHHHCCCCCCCEEEEECHHH
Q ss_conf             998610012888689851177
Q gi|254780767|r   79 QTVELIVSSKPDVLLIVDNPD   99 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~iD~pg   99 (383)
                      .+.+.+++.+||++|.+.|+-
T Consensus        66 ~~~~~l~~~~~dl~i~~~~~~   86 (305)
T 2bln_A           66 LWVERIAQLSPDVIFSFYYRH   86 (305)
T ss_dssp             HHHHHHHHTCCSEEEEESCCS
T ss_pred             HHHHHHHHCCCCEEEEEHHHH
T ss_conf             999999832999999863212


No 330
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=24.18  E-value=18  Score=15.05  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=26.0

Q ss_pred             CCCCCEEEEECHHHHH---HHHHHHHHHHCCCCCCEEEECCCCCCCCCC
Q ss_conf             1288868985117765---799998663013463111100221100366
Q gi|254780767|r   86 SSKPDVLLIVDNPDFT---HRVAKRVRKKMPNLPIINYVCPSVWAWREG  131 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFn---l~lak~lkk~~~~ipvi~yv~PqvWAWr~~  131 (383)
                      ..++++|+.|..-|..   -++.+.++++  |+++|-=.|-...+.-.+
T Consensus       149 ~~~tkaIi~vh~~G~~~d~~~i~~i~k~~--~i~vIEDaAqa~Ga~~~g  195 (399)
T 2oga_A          149 TPRTRALLPVHLYGHPADMDALRELADRH--GLHIVEDAAQAHGARYRG  195 (399)
T ss_dssp             CTTEEEECCBCGGGCCCCHHHHHHHHHHH--TCEECEECTTCTTCEETT
T ss_pred             CCCCEEEEEECCCCCCCCHHHHHHHHHHC--CCEEEEECCCHHCCCCCC
T ss_conf             76650898527889800369999999973--986999773121573463


No 331
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=24.10  E-value=30  Score=13.59  Aligned_cols=24  Identities=13%  Similarity=0.113  Sum_probs=11.9

Q ss_pred             CEEEEHHHCCCCCCCHHHCCCCCHH
Q ss_conf             1023024407842612420548989
Q gi|254780767|r  310 TCALPNLIVDYPLVPEYFNSMIRSE  334 (383)
Q Consensus       310 ~i~LpNii~~~~ivPEliQ~~~~~~  334 (383)
                      |+|+|=++-.+.+ -+.+.-+++++
T Consensus       274 ~~s~P~~lg~~Gv-~~v~~l~L~~~  297 (322)
T 1t2d_A          274 FGGTPVVLGANGV-EQVIELQLNSE  297 (322)
T ss_dssp             EEEEEEEEETTEE-EEECCCCCCHH
T ss_pred             EEEEEEEECCCCE-EEECCCCCCHH
T ss_conf             9998899834740-79789998999


No 332
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=23.84  E-value=30  Score=13.56  Aligned_cols=39  Identities=21%  Similarity=0.332  Sum_probs=26.3

Q ss_pred             HHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             99861001288868985117765799998663013463111
Q gi|254780767|r   79 QTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIIN  119 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~  119 (383)
                      .+.+.+...++|.+.++=.|+|.-.+.+.+++.  |+|++.
T Consensus        98 ~~~~~~~~~~~~~iy~CGP~~M~~~v~~~l~~~--GvP~~~  136 (142)
T 3lyu_A           98 KVRELLESEDWDLVFMVGPVGDQKQVFEVVKEY--GVPMLE  136 (142)
T ss_dssp             HHHHHHHSSCCSEEEEESCHHHHHHHHHHHHHH--TCCBC-
T ss_pred             HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHC--CCCEEE
T ss_conf             877544677886999969999999999999981--989880


No 333
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide complex; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=23.79  E-value=30  Score=13.55  Aligned_cols=32  Identities=16%  Similarity=0.318  Sum_probs=23.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             87459999768214789999999999738998399997
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGV   39 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~gi   39 (383)
                      ++|||+|. |-.  =..|+.|++.|.++ +  .++.++
T Consensus        19 ~~MkILVT-Ggt--GfiG~~lv~~Ll~~-G--~~V~~~   50 (330)
T 2pzm_A           19 SHMRILIT-GGA--GCLGSNLIEHWLPQ-G--HEILVI   50 (330)
T ss_dssp             TCCEEEEE-TTT--SHHHHHHHHHHGGG-T--CEEEEE
T ss_pred             CCCEEEEE-CCC--CHHHHHHHHHHHHC-C--CEEEEE
T ss_conf             99769998-987--78999999999978-6--989999


No 334
>3iac_A Glucuronate isomerase; IDP02065, structural genomics, center for structural genomics of infectious diseases, csgid; 2.22A {Salmonella typhimurium}
Probab=23.71  E-value=30  Score=13.55  Aligned_cols=107  Identities=10%  Similarity=0.126  Sum_probs=59.8

Q ss_pred             CCEEEHHHHH---HHHHHHHHHHHH--------HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH-CCCCCCEEEECCCC
Q ss_conf             3110136746---645999999999--------98610012888689851177657999986630-13463111100221
Q gi|254780767|r   58 LSVIGIMQVV---RHLPQFIFRINQ--------TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKK-MPNLPIINYVCPSV  125 (383)
Q Consensus        58 l~v~G~~evl---~~~~~~~~~~~~--------~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~-~~~ipvi~yv~Pqv  125 (383)
                      -.+.|+-|++   .+...++...+.        ....+++.+..++.+-|-|-=.|.-.+.+.+- +.+.+|+       
T Consensus       113 ~~~FGide~ll~~~~A~~i~d~~n~~L~~~~f~~r~Ll~~~nVe~v~TTDDP~DdLe~H~~la~~~~~~~rV~-------  185 (473)
T 3iac_A          113 RRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDDPIDSLEYHRQIAADDSIDIEVA-------  185 (473)
T ss_dssp             HTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEECCBCTTCCCHHHHHHHHCTTCCSEEE-------
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCEE-------
T ss_conf             9976998877975439999999999976887768999998690699947999885789999853799776123-------


Q ss_pred             CCCCCCCHH-----HHHHHHHH--------------HCCCCCCCHHHHHCCCCCCEEECCCCCCCC
Q ss_conf             100366355-----79999986--------------401567742232002553147638821122
Q gi|254780767|r  126 WAWREGRAR-----KMCAYINQ--------------VISILPFEKEVMQRLGGPPTTFVGHPLSSS  172 (383)
Q Consensus       126 WAWr~~R~k-----~~~~~~d~--------------~~~ifpFE~~~f~k~~~~~~~fVGHPl~d~  172 (383)
                      .+||+-++-     .+..++++              ++-.+-.=.+||.+ +|..+.=.|+|-...
T Consensus       186 PtfRPD~~l~i~~~~f~~~l~kL~~~sg~~i~s~~~~l~AL~~R~~~F~~-~G~~~sDhgl~~~~~  250 (473)
T 3iac_A          186 PSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDHFAA-CGCRASDHGIETLRF  250 (473)
T ss_dssp             CCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHH-TTCCEEEEEESSCCC
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCC
T ss_conf             03155010265717699999999998598868899999999999999998-098896037886665


No 335
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=23.70  E-value=30  Score=13.54  Aligned_cols=34  Identities=21%  Similarity=0.221  Sum_probs=19.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHC-CCCEEEEEECC
Q ss_conf             459999768214789999999999738-99839999717
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMV-SYPINLVGVGG   41 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~-~~~~~~~giGG   41 (383)
                      |||-|+ |  +|++ |+.+.-.|..+. -.++.++-+-.
T Consensus         1 mKI~Ii-G--aG~V-G~~~a~~l~~~~~~~el~L~Di~~   35 (304)
T 2v6b_A            1 MKVGVV-G--TGFV-GSTAAFALVLRGSCSELVLVDRDE   35 (304)
T ss_dssp             CEEEEE-C--CSHH-HHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CEEEEE-C--CCHH-HHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             979999-9--6889-999999998379988699985899


No 336
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=23.60  E-value=30  Score=13.53  Aligned_cols=33  Identities=30%  Similarity=0.445  Sum_probs=24.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9874599997682147899999999997389983999971
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |+--||+|. | + |- .|..|++.|.++   +.+++|+.
T Consensus         1 M~m~kiLIt-G-a-G~-iG~~l~~~L~~~---g~~V~~~~   33 (286)
T 3gpi_A            1 MSLSKILIA-G-C-GD-LGLELARRLTAQ---GHEVTGLR   33 (286)
T ss_dssp             -CCCCEEEE-C-C-SH-HHHHHHHHHHHT---TCCEEEEE
T ss_pred             CCCCEEEEE-C-C-CH-HHHHHHHHHHHC---CCEEEEEE
T ss_conf             997879998-9-4-59-999999999978---59899997


No 337
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A
Probab=23.54  E-value=30  Score=13.52  Aligned_cols=110  Identities=13%  Similarity=0.112  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHCCCCEE-EEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECH
Q ss_conf             9999999973899839-99971789994788065044453110136746645999999999986100128886898-511
Q gi|254780767|r   20 GDLIKSLKEMVSYPIN-LVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLI-VDN   97 (383)
Q Consensus        20 a~li~~Lk~~~~~~~~-~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~-iD~   97 (383)
                      -+-+.+||++ +|+++ +..|||-... .              .|..++..-..-.+..+.+++.++++.-|-|-+ --|
T Consensus        74 ~~~~~~lk~~-~p~lKvllSiGGw~~s-~--------------~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGIDiDWE~  137 (392)
T 1ll7_A           74 IKQMYLLKKN-NRNLKTLLSIGGWTYS-P--------------NFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQY  137 (392)
T ss_dssp             HHHHHHHHHH-CTTCEEEEEEEHHHHG-G--------------GSHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred             HHHHHHHHHH-CCCCEEEEEEECCCCC-C--------------CHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_conf             9999999865-8997699998189888-7--------------6766744999999999999999861666735661141


Q ss_pred             HH-------HHHHHHHHHHHHC--------CCCC-CEEE-ECCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             77-------6579999866301--------3463-1111-00221100366355799999864015
Q gi|254780767|r   98 PD-------FTHRVAKRVRKKM--------PNLP-IINY-VCPSVWAWREGRARKMCAYINQVISI  146 (383)
Q Consensus        98 pg-------Fnl~lak~lkk~~--------~~ip-vi~y-v~PqvWAWr~~R~k~~~~~~d~~~~i  146 (383)
                      |+       |. .+.+.+|...        .+.. .+-. +++..|.-+.--.+.+.+++|.+.+.
T Consensus       138 p~~~~~~~~~~-~ll~elr~~l~~~~~~~~~~~~~~ls~a~~~~~~~~~~yd~~~l~~~vD~i~vM  202 (392)
T 1ll7_A          138 PEDEKQANDFV-LLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLM  202 (392)
T ss_dssp             CCSHHHHHHHH-HHHHHHHHHHHHHHHTSTTSCCCEEEEEEECSHHHHTTSCHHHHHTTCSEEEEE
T ss_pred             CCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCHHHHHHHHHHCCEEEEE
T ss_conf             45543112088-999999999998765404787247888436875761412099887305889998


No 338
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A*
Probab=23.48  E-value=30  Score=13.52  Aligned_cols=39  Identities=8%  Similarity=0.011  Sum_probs=24.9

Q ss_pred             CCCCHHHHHHHHHH-----------HHCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             54898999999999-----------8449899999999999999983899
Q gi|254780767|r  329 SMIRSEALVRWIER-----------LSQDTLQRRAMLHGFENLWDRMNTK  367 (383)
Q Consensus       329 ~~~~~~~i~~~~~~-----------ll~d~~~r~~~~~~~~~~~~~Lg~~  367 (383)
                      +-.+++...+.+..           +++.+..-.++.+++.+..++-|-.
T Consensus       353 GI~s~~DA~e~i~AGAslVQiyTalvy~Gp~~i~~I~~eL~~~L~~~G~~  402 (415)
T 3i65_A          353 GIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYY  402 (415)
T ss_dssp             SCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCS
T ss_pred             CCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             98999999999984987988517888319189999999999999984999


No 339
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=23.18  E-value=31  Score=13.48  Aligned_cols=18  Identities=11%  Similarity=0.123  Sum_probs=11.7

Q ss_pred             EEEEEECCCCCCHHHHCC
Q ss_conf             059985387430123051
Q gi|254780767|r  194 KILLLPGSRAQEIYKILP  211 (383)
Q Consensus       194 ~I~llPGSR~~EI~~~lP  211 (383)
                      -+++-|+..-+++...++
T Consensus       138 Glalnp~T~i~~l~~~l~  155 (246)
T 3inp_A          138 GLALNPATGIDCLKYVES  155 (246)
T ss_dssp             EEEECTTCCSGGGTTTGG
T ss_pred             EEEECCCCCHHHHHHHHH
T ss_conf             999637778999988764


No 340
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, protein structure initiative NDRT; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=23.17  E-value=31  Score=13.48  Aligned_cols=33  Identities=30%  Similarity=0.452  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHHC----------CCHHHHHHH---HHHCCCEEEECCCC
Q ss_conf             357887635523----------311566888---76275302540577
Q gi|254780767|r  262 KQVFMTCNAAMA----------ASGTVILEL---ALCGIPVVSIYKSE  296 (383)
Q Consensus       262 ~~~l~~sd~ai~----------~SGTaTLE~---al~g~P~IV~Yk~~  296 (383)
                      .+.+..||++|+          -|||+- |+   ..+|+| |++|.+.
T Consensus        62 ~~~i~~~D~via~Ld~f~g~~~D~GT~~-EiG~A~algKP-Vv~~~~d  107 (161)
T 2f62_A           62 IQMIKDCDAVIADLSPFRGHEPDCGTAF-EVGCAAALNKM-VLTFTSD  107 (161)
T ss_dssp             HHHHHHCSEEEEECCCCSSSSCCHHHHH-HHHHHHHTTCE-EEEECSC
T ss_pred             HHHHHHCCEEEEEECCCCCCCCCCCHHH-HHHHHHHCCCE-EEEEECC
T ss_conf             9999879999999237779999988899-99999987995-9999667


No 341
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=23.14  E-value=31  Score=13.47  Aligned_cols=135  Identities=13%  Similarity=0.196  Sum_probs=83.2

Q ss_pred             CCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCC-CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             565059985387430123051118999876402735126201663-3688999999604888505520552035788763
Q gi|254780767|r  191 QWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVS-SQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCN  269 (383)
Q Consensus       191 ~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd  269 (383)
                      ..+.|.+.||=--. +.+---..-+.++.|.++..+.+|-|..+. -....+.-.+.+.+.+.+++..-++...-+..+|
T Consensus        22 ~A~~VvIVPGYGmA-vAqAQ~~v~el~~~L~~~g~~V~faIHPVAGRMPGHmNVLLAEA~VPYd~v~eMdeIN~~f~~tD  100 (180)
T 1pno_A           22 NASKVIIVPGYGMA-VAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTAD  100 (180)
T ss_dssp             TCSEEEEEECHHHH-HHTCHHHHHHHHHHHHHTTCEEEEEECTTCTTSTTHHHHHHHHTTCCGGGEEEHHHHGGGGGGCS
T ss_pred             HCCEEEEECCHHHH-HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHCHHHHCCHHHHCC
T ss_conf             48949997681799-99988999999999986898169984304033875412466531798899737664044021267


Q ss_pred             HHHCCCHHHHH--------HHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHH
Q ss_conf             55233115668--------88762753025405774100001024676102302440784261242
Q gi|254780767|r  270 AAMAASGTVIL--------ELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYF  327 (383)
Q Consensus       270 ~ai~~SGTaTL--------E~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEli  327 (383)
                      ++|+.----+.        ..-+.|-|.+=+.|..- ...++|-+..-|.+..|=+.-++-.-=|+
T Consensus       101 v~lVIGANDvVNPaA~~dp~SpI~GMPvl~v~kak~-viv~KRsm~~GyaGv~NpLF~~~nt~Mlf  165 (180)
T 1pno_A          101 VAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGT-VLFIKRSMASGYAGVENELFFRNNTMMLF  165 (180)
T ss_dssp             EEEEESCCGGGCGGGTTCTTSTTTTCCCCCGGGSSE-EEEEESSSCCCTTCCCCGGGTSTTEEEEE
T ss_pred             EEEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCE-EEEEECCCCCCCCCCCCCCEECCCCEEEE
T ss_conf             999943654357766169999756995566040888-99997888888687877625638847993


No 342
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=22.86  E-value=31  Score=13.44  Aligned_cols=25  Identities=16%  Similarity=0.409  Sum_probs=12.7

Q ss_pred             CCCCEEEE-ECHHHHH-HHHHHHHHHH
Q ss_conf             28886898-5117765-7999986630
Q gi|254780767|r   87 SKPDVLLI-VDNPDFT-HRVAKRVRKK  111 (383)
Q Consensus        87 ~~Pd~vi~-iD~pgFn-l~lak~lkk~  111 (383)
                      .+||++++ +.=||.| +.+++.+|+.
T Consensus        59 ~~~DliilD~~MP~~dG~e~~~~ir~~   85 (145)
T 3kyj_B           59 PNVDLILLDIEMPVMDGMEFLRHAKLK   85 (145)
T ss_dssp             TTCCEEEECTTSCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCHHHHHHHHHHC
T ss_conf             999899987899999999999999856


No 343
>3k4t_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding protein, P binding; 2.59A {Cauliflower mosaic virus}
Probab=22.68  E-value=32  Score=13.41  Aligned_cols=47  Identities=15%  Similarity=0.319  Sum_probs=33.3

Q ss_pred             CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHH
Q ss_conf             98999999999844989999999999999998389999----899999999986
Q gi|254780767|r  332 RSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKP----AGHMAAEIVLQV  381 (383)
Q Consensus       332 ~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~----a~~~AA~~I~~~  381 (383)
                      |-..|.+++...+.|.   +.+..+.+.+.+++|+..+    -.-.||.+|.++
T Consensus         3 NLnqIqkEvs~vl~~q---KS~k~dI~aILa~lGSt~~~~~nlEavAAKIi~Dl   53 (95)
T 3k4t_A            3 NLNQIQKEVSEILSDQ---KSMKADIKAILELLGSQNPIKESLETVAAKIVNDL   53 (95)
T ss_dssp             HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             5899999999999999---99998899999985689975130999999999999


No 344
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=22.19  E-value=32  Score=13.35  Aligned_cols=89  Identities=19%  Similarity=0.333  Sum_probs=52.0

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECC-----HHHHHCCCEEEE-CHHHCCEEEHHHHHHHHHHHHHH
Q ss_conf             745999976821478999999999973899839999717-----899947880650-44453110136746645999999
Q gi|254780767|r    3 SLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGG-----PSLQKEGLVSLF-DFSELSVIGIMQVVRHLPQFIFR   76 (383)
Q Consensus         3 ~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG-----~~m~~~G~~~~~-~~~~l~v~G~~evl~~~~~~~~~   76 (383)
                      .|||.|+...    -.|..+.+.|++.   ++++..+--     +.+++.|...++ |.++                   
T Consensus         4 gmhVII~G~G----r~G~~va~~L~~~---g~~vvvID~d~~~v~~l~~~g~~vi~GDat~-------------------   57 (413)
T 3l9w_A            4 GMRVIIAGFG----RFGQITGRLLLSS---GVKMVVLDHDPDHIETLRKFGMKVFYGDATR-------------------   57 (413)
T ss_dssp             CCSEEEECCS----HHHHHHHHHHHHT---TCCEEEEECCHHHHHHHHHTTCCCEESCTTC-------------------
T ss_pred             CCEEEEECCC----HHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHCCCCEEEECCCC-------------------
T ss_conf             9969998988----8999999999968---9988999899999999997799099963899-------------------


Q ss_pred             HHHHHHHCCCCCCCEEE-EECHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             99998610012888689-8511776579999866301346311
Q gi|254780767|r   77 INQTVELIVSSKPDVLL-IVDNPDFTHRVAKRVRKKMPNLPII  118 (383)
Q Consensus        77 ~~~~~~~i~~~~Pd~vi-~iD~pgFnl~lak~lkk~~~~ipvi  118 (383)
                       ..+.+..--.+.+++| ++|.+.-|+.++..+|+.++.++++
T Consensus        58 -~~~L~~Agi~~A~~vIia~~d~~~n~~i~~~ar~~~p~~~Ii   99 (413)
T 3l9w_A           58 -MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQII   99 (413)
T ss_dssp             -HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEE
T ss_pred             -HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEE
T ss_conf             -999985697759999997198899999999999978998399


No 345
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis}
Probab=21.83  E-value=33  Score=13.30  Aligned_cols=63  Identities=16%  Similarity=0.220  Sum_probs=32.2

Q ss_pred             HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH
Q ss_conf             9861001288868985117765799998663013463111100221100366355799999864015677422
Q gi|254780767|r   80 TVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKE  152 (383)
Q Consensus        80 ~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~  152 (383)
                      -.+.+..-+||+||.-++-+-...+ +.+++.  ++|++.+..++-|       ..+.+.++.+--+|..|.+
T Consensus        51 n~E~i~~l~PDlIi~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~-------~~~~~~i~~~g~~~g~~~~  113 (255)
T 3md9_A           51 NAEGILAMKPTMLLVSELAQPSLVL-TQIASS--GVNVVTVPGQTTP-------ESVAMKINAVATALHQTEK  113 (255)
T ss_dssp             CHHHHHTTCCSEEEEETTCSCHHHH-HHHHHT--TCEEEEECCCCSH-------HHHHHHHHHHHHHHTCHHH
T ss_pred             CHHHHHCCCCCEEEECCCCCCHHHH-HHHHHC--CCCEEEECCCCCH-------HHHHHHHHHHHHHCCCHHH
T ss_conf             9999946699889964644415677-788760--7833640477987-------8988999898786070689


No 346
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolase; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=21.77  E-value=33  Score=13.30  Aligned_cols=123  Identities=11%  Similarity=0.156  Sum_probs=68.9

Q ss_pred             HHHHHHHHHCCCCEE-EEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECHH
Q ss_conf             999999973899839-99971789994788065044453110136746645999999999986100128886898-5117
Q gi|254780767|r   21 DLIKSLKEMVSYPIN-LVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPDVLLI-VDNP   98 (383)
Q Consensus        21 ~li~~Lk~~~~~~~~-~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~-iD~p   98 (383)
                      +-+.+||++ +|+++ +..|||-.+ +         +     +|..++..--.-.+..+.+++.++++.-|-|-+ --||
T Consensus        93 ~~~~~lK~~-np~lKvllSvGGw~~-s---------~-----~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGIDIDWE~p  156 (406)
T 3g6m_A           93 KQLYKLKKA-NRSLKIMLSIGGWTW-S---------T-----NFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYP  156 (406)
T ss_dssp             HHHHHHHHH-CTTCEEEEEEECSSS-C---------T-----THHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCC
T ss_pred             HHHHHHHHH-CCCCEEEEEEECCCC-C---------C-----CHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             999999986-899869999958877-7---------6-----47778669999999999999999846667500232226


Q ss_pred             H-------HHHHHHHHHHHHC--------CCCC--CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
Q ss_conf             7-------6579999866301--------3463--111100221100366355799999864015677422320025531
Q gi|254780767|r   99 D-------FTHRVAKRVRKKM--------PNLP--IINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGPP  161 (383)
Q Consensus        99 g-------Fnl~lak~lkk~~--------~~ip--vi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~  161 (383)
                      +       |. .+.+.+|+..        .+.+  +.-.+++..|..+......+.+++|.+...-      |+ ++|--
T Consensus       157 ~~~~d~~~~~-~ll~~Lr~~~~~~~~~~~~g~~~~ls~a~~~~~~~~~~~d~~~l~~~vD~invMt------YD-~~g~w  228 (406)
T 3g6m_A          157 ASETDANNMV-LLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLGSVLDNINLMA------YD-YAGSW  228 (406)
T ss_dssp             CSHHHHHHHH-HHHHHHHHHHHHHHHHHSTTCCCEEEEEEECSHHHHTTSCHHHHHHHCSEEEEEC------CC-CSSTT
T ss_pred             CCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCHHHHHHHCCEEEEEC------CC-CCCCC
T ss_conf             7732100079-9999999988877666325775389996457978745557999986477766642------12-56777


Q ss_pred             EEECCC
Q ss_conf             476388
Q gi|254780767|r  162 TTFVGH  167 (383)
Q Consensus       162 ~~fVGH  167 (383)
                      ...+||
T Consensus       229 ~~~tg~  234 (406)
T 3g6m_A          229 DSVSGH  234 (406)
T ss_dssp             SSSCCC
T ss_pred             CCCCCC
T ss_conf             777776


No 347
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural genomics, NPPSFA; 2.50A {Thermus thermophilus HB8}
Probab=21.64  E-value=22  Score=14.41  Aligned_cols=25  Identities=20%  Similarity=0.397  Sum_probs=18.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             4599997682147899999999997
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKE   28 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~   28 (383)
                      ||--++.=+|||++|-++++..+++
T Consensus         1 m~ri~tG~~PSG~~HlGh~l~~i~~   25 (337)
T 2el7_A            1 MKRVLSGIQPSGEIHIGNYLGAIKQ   25 (337)
T ss_dssp             CCCEEEEECSCSCCBHHHHHTHHHH
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             9856778388985728877999999


No 348
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=21.60  E-value=33  Score=13.27  Aligned_cols=51  Identities=14%  Similarity=0.190  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHH---HHHHHCCCCCCE
Q ss_conf             645999999999986100128886898511776579999---866301346311
Q gi|254780767|r   68 RHLPQFIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAK---RVRKKMPNLPII  118 (383)
Q Consensus        68 ~~~~~~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak---~lkk~~~~ipvi  118 (383)
                      +++..+++.+++......+...+.+|+==.-||-+--|.   .+|+..++++++
T Consensus        23 ~~~~~Ik~~L~~~l~~~~~~G~~~fisg~a~G~D~~aAe~vl~lk~~yp~i~L~   76 (181)
T 2nx2_A           23 KALYYIKKAIKNRLIAFLDEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVA   76 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             107999999999999999779959997696559999999999975347795499


No 349
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=21.56  E-value=33  Score=13.27  Aligned_cols=80  Identities=15%  Similarity=0.161  Sum_probs=44.4

Q ss_pred             CCCEEEEECH----HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEE
Q ss_conf             8886898511----776579999866301346311110022110036635579999986401567742232002553147
Q gi|254780767|r   88 KPDVLLIVDN----PDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGPPTT  163 (383)
Q Consensus        88 ~Pd~vi~iD~----pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~~~  163 (383)
                      .|=-|+.||.    |. .+...+.+.+. +|++++.+.+|..++++..--..-...+..+...-|++. ..+.. +..+.
T Consensus        75 ~p~pvl~iDTg~~FpE-Ti~f~d~v~~~-~gl~l~v~~~~~~~~~g~~~~~~~~~~~~~~~K~~pl~~-al~~~-~~d~~  150 (325)
T 1zun_A           75 LPFPVMHVDTRWKFQE-MYRFRDQMVEE-MGLDLITHINPDGVAQGINPFTHGSAKHTDIMKTEGLKQ-ALDKH-GFDAA  150 (325)
T ss_dssp             CSSCEEEECCSCCCHH-HHHHHHHHHHT-TTCCEEEECC--------------CCHHHHHHTHHHHHH-HHHHH-TCSEE
T ss_pred             CCEEEEEECCCCCHHH-HHHHHHHHHHH-HCCCCEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH-HHHHC-CCCEE
T ss_conf             9835899548986299-99999999998-299722514806776177865578688647887788999-99860-87638


Q ss_pred             ECCCCCCC
Q ss_conf             63882112
Q gi|254780767|r  164 FVGHPLSS  171 (383)
Q Consensus       164 fVGHPl~d  171 (383)
                      +.|..--+
T Consensus       151 i~G~RrdE  158 (325)
T 1zun_A          151 FGGARRDE  158 (325)
T ss_dssp             ECCCCTTS
T ss_pred             EECCCHHH
T ss_conf             84243544


No 350
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=21.52  E-value=15  Score=15.60  Aligned_cols=43  Identities=9%  Similarity=0.182  Sum_probs=28.2

Q ss_pred             HHHCCCCCCCEEEEECHHHHHH---HHHHHHHHHCCCCCCEEEECCCC
Q ss_conf             8610012888689851177657---99998663013463111100221
Q gi|254780767|r   81 VELIVSSKPDVLLIVDNPDFTH---RVAKRVRKKMPNLPIINYVCPSV  125 (383)
Q Consensus        81 ~~~i~~~~Pd~vi~iD~pgFnl---~lak~lkk~~~~ipvi~yv~Pqv  125 (383)
                      .......++.++|.+.+-|+..   ++.+.+++.  |+++|-=.|-..
T Consensus       115 ~~~~~~~~~~~ii~~~~~G~~~d~~~i~~~~~~~--~i~lIED~A~a~  160 (394)
T 1o69_A          115 AIKECEKKPKALILTHLYGNAAKMDEIVEICKEN--DIVLIEDAAEAL  160 (394)
T ss_dssp             HHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHT--TCEEEEECTTCT
T ss_pred             HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC--CCEEEECCHHHH
T ss_conf             9850356856999824788851689999999975--986884130432


No 351
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=21.42  E-value=33  Score=13.25  Aligned_cols=99  Identities=15%  Similarity=0.193  Sum_probs=61.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999976821478999999999973899839999717899947880650444531101367466459999999999861
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVEL   83 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~   83 (383)
                      |||.|-=-...    |=.+.++|++..| +.++..+|...--..|-++                  -..+.+...+..+.
T Consensus         1 mkIgvfDSGiG----Glsvl~~l~~~lp-~~~~iY~~D~a~~PYG~ks------------------~~~i~~~~~~~~~~   57 (255)
T 2jfz_A            1 MKIGVFDSGVG----GFSVLKSLLKARL-FDEIIYYGDSARVPYGTKD------------------PTTIKQFGLEALDF   57 (255)
T ss_dssp             CEEEEEESSST----THHHHHHHHHTTC-CSEEEEEECTTTCCCTTSC------------------HHHHHHHHHHHHHH
T ss_pred             CEEEEEECCCC----HHHHHHHHHHHCC-CCCEEEEECCCCCCCCCCC------------------HHHHHHHHHHHHHH
T ss_conf             98999928976----7999999998789-9998999447899989899------------------99999999999999


Q ss_pred             CCCCCCCEEEEEC-HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
Q ss_conf             0012888689851-17765799998663013463111100221100
Q gi|254780767|r   84 IVSSKPDVLLIVD-NPDFTHRVAKRVRKKMPNLPIINYVCPSVWAW  128 (383)
Q Consensus        84 i~~~~Pd~vi~iD-~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAW  128 (383)
                      +.+.++|++|.=. ...  --....+|+. +.+|++..+.|.+.|=
T Consensus        58 l~~~~~~~IVIACNTas--a~al~~lr~~-~~ipiigvi~p~~~a~  100 (255)
T 2jfz_A           58 FKPHEIELLIVACNTAS--ALALEEMQKY-SKIPIVGVIEPSILAI  100 (255)
T ss_dssp             HGGGCCSCEEECCHHHH--HHTHHHHHHH-CSSCEECSSHHHHHHH
T ss_pred             HHHCCCCEEEECCCHHH--HHHHHHHHHC-CCCCEEECCCCHHHHH
T ss_conf             99739998997576898--9756998844-6886676763069999


No 352
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A*
Probab=21.25  E-value=34  Score=13.23  Aligned_cols=105  Identities=15%  Similarity=0.252  Sum_probs=55.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCE-EEH-HHHHHHHHHHHHHHH
Q ss_conf             987459999768214789999999999738998399997178999478806504445311-013-674664599999999
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSV-IGI-MQVVRHLPQFIFRIN   78 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v-~G~-~evl~~~~~~~~~~~   78 (383)
                      |+++|=.++|+  .| -.|.+++|++|+.   +++...|--+.-..+-   -..+.+-++ +|- .+....|-    ..+
T Consensus         1 m~~~~~~lian--rg-~ia~r~~r~~~~~---g~~~v~v~s~~d~~~~---~~~~ad~~~~~~~~~~~~~~yl----~~~   67 (1150)
T 3hbl_A            1 MKQIKKLLVAN--RG-EIAIRIFRAAAEL---DISTVAIYSNEDKSSL---HRYKADESYLVGSDLGPAESYL----NIE   67 (1150)
T ss_dssp             --CCCEEEECC--CH-HHHHHHHHHHHHT---TCEEEEEECGGGTTCG---GGGTSSEEEECCTTSCTTGGGT----CHH
T ss_pred             CCCCCEEEEEC--CC-HHHHHHHHHHHHC---CCEEEEECCHHHHCCC---CHHHCCEEEECCCCCCHHHCCC----CHH
T ss_conf             99788899989--71-9999999999986---9939998184784688---9788788898289886332115----999


Q ss_pred             HHHHHCCCCCCCEEEEECHHHH---HHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf             9986100128886898511776---5799998663013463111100221
Q gi|254780767|r   79 QTVELIVSSKPDVLLIVDNPDF---THRVAKRVRKKMPNLPIINYVCPSV  125 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~iD~pgF---nl~lak~lkk~~~~ipvi~yv~Pqv  125 (383)
                      .+.+.+++.++|+|.-  --||   |-.+|+.+.+.  ||.   +|.|+.
T Consensus        68 ~i~~~a~~~~~~ai~p--gygflsen~~~a~~~~~~--gi~---~iGp~~  110 (1150)
T 3hbl_A           68 RIIDVAKQANVDAIHP--GYGFLSENEQFARRCAEE--GIK---FIGPHL  110 (1150)
T ss_dssp             HHHHHHHHTTCSEEEC--TTTTSTTCHHHHHHHHHT--TCE---ESSSCH
T ss_pred             HHHHHHHHHCCCEEEC--CCCCCCCCHHHHHHHHHC--CCE---EECCCH
T ss_conf             9999999979299965--844032499999999987--997---989699


No 353
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=21.13  E-value=34  Score=13.21  Aligned_cols=41  Identities=12%  Similarity=0.185  Sum_probs=28.8

Q ss_pred             HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             9998610012888689851177657999986630134631111
Q gi|254780767|r   78 NQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      ..+.+.+.+.++.++|++.+..---.|++.|++.  |+++..+
T Consensus        44 ~~L~~~l~~~~~kvlIF~~~~~~~~~l~~~L~~~--g~~~~~i   84 (191)
T 2p6n_A           44 VYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLK--GVEAVAI   84 (191)
T ss_dssp             HHHHHHHTTSCSCEEEECSCHHHHHHHHHHHHHH--TCCEEEE
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHC--CCCEEEE
T ss_conf             9999998448999999989999999999999878--9979999


No 354
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=21.01  E-value=34  Score=13.20  Aligned_cols=41  Identities=15%  Similarity=0.273  Sum_probs=21.3

Q ss_pred             HHHHHCCCCCCCEEEEECHHHHHHHHHHH--HHHHCCCCCCEEEE
Q ss_conf             99861001288868985117765799998--66301346311110
Q gi|254780767|r   79 QTVELIVSSKPDVLLIVDNPDFTHRVAKR--VRKKMPNLPIINYV  121 (383)
Q Consensus        79 ~~~~~i~~~~Pd~vi~iD~pgFnl~lak~--lkk~~~~ipvi~yv  121 (383)
                      .+.+.+.+.+.++++..-+..-..-++..  +.+  .++|.+.+.
T Consensus        64 ~~~~li~~~~v~aiig~~~s~~~~a~~~~~~~~~--~~vp~i~~~  106 (364)
T 3lop_A           64 NVRDMARVDNPVALLTVVGTANVEALMREGVLAE--ARLPLVGPA  106 (364)
T ss_dssp             HHHHHHHHSCEEEEECCCCHHHHHHHHHTTHHHH--HTCCEESCS
T ss_pred             HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH--CCCCCCCCC
T ss_conf             9999996399679997888612455677888886--188644676


No 355
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A*
Probab=20.96  E-value=34  Score=13.19  Aligned_cols=37  Identities=11%  Similarity=0.019  Sum_probs=29.6

Q ss_pred             CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf             128886898511776579999866301346311110022
Q gi|254780767|r   86 SSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPS  124 (383)
Q Consensus        86 ~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~Pq  124 (383)
                      +.+.++||+-.+.+-...++..+...  +||+|-+.+..
T Consensus        69 ~~~V~aviGp~~s~~~~~v~~~~~~~--~iP~Is~~~~~  105 (395)
T 3h6g_A           69 SLGVAAIFGPSHSSSANAVQSICNAL--GVPHIQTRWKH  105 (395)
T ss_dssp             HHCCSCEECCSSHHHHHHHHHHHHHT--TCCEEECSCCC
T ss_pred             HCCCEEEECCCCCHHHHHHHHHHHHC--CEEEEECCCCC
T ss_conf             66976999889828899999998633--46674046787


No 356
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reductase family; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=20.95  E-value=34  Score=13.19  Aligned_cols=35  Identities=17%  Similarity=0.274  Sum_probs=24.9

Q ss_pred             CCCCE-EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             98745-99997682147899999999997389983999971
Q gi|254780767|r    1 MNSLK-IAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         1 m~~mk-i~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      |..|| .-+++|-.||  .|..+.+.|-++ +  .++..++
T Consensus         1 M~~mk~~VlITGas~G--IG~a~a~~la~~-G--~~V~~~~   36 (234)
T 2ehd_A            1 MEGMKGAVLITGASRG--IGEATARLLHAK-G--YRVGLMA   36 (234)
T ss_dssp             ---CCCEEEESSTTSH--HHHHHHHHHHHT-T--CEEEEEE
T ss_pred             CCCCCCEEEEECCCCH--HHHHHHHHHHHC-C--CEEEEEE
T ss_conf             9999988999776749--999999999987-9--9999998


No 357
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Porphyromonas gingivalis W83}
Probab=20.95  E-value=34  Score=13.19  Aligned_cols=55  Identities=16%  Similarity=0.156  Sum_probs=37.2

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHH---HHH-CCCEEEECHHH
Q ss_conf             874599997682147899999999997389983999971-789---994-78806504445
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG-GPS---LQK-EGLVSLFDFSE   57 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG-G~~---m~~-~G~~~~~~~~~   57 (383)
                      ++|||.|+-..+=|-.+|+.|.++-... +...++.-+. |++   |++ .|+....+-.+
T Consensus         7 ~~MkI~IlGaGaiG~~~a~~L~~~g~~~-~~~~~Vt~i~R~~~~~ai~~~~gl~i~~~~~~   66 (317)
T 2qyt_A            7 QPIKIAVFGLGGVGGYYGAMLALRAAAT-DGLLEVSWIARGAHLEAIRAAGGLRVVTPSRD   66 (317)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHHHHHT-TSSEEEEEECCHHHHHHHHHHTSEEEECSSCE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCC-CCCEEEEEEEEHHHHHHHHHCCCEEEEECCCC
T ss_conf             9998999996899999999999859988-87516799922899999997699799968974


No 358
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.92  E-value=34  Score=13.18  Aligned_cols=47  Identities=30%  Similarity=0.268  Sum_probs=31.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH---HHHCCCEEEEC
Q ss_conf             9874599997682147899999999997389983999971789---99478806504
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPS---LQKEGLVSLFD   54 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~---m~~~G~~~~~~   54 (383)
                      |+ |||.|+-..+=|=.+|+.|-    +  ..++.++.-.|++   +++.|+...-+
T Consensus         1 m~-MkI~IiGaGaiG~~~a~~L~----~--~~~V~l~~r~~~~~~~i~~~Gl~~~~~   50 (307)
T 3ego_A            1 MS-LKIGIIGGGSVGLLCAYYLS----L--YHDVTVVTRRQEQAAAIQSEGIRLYKG   50 (307)
T ss_dssp             -C-CEEEEECCSHHHHHHHHHHH----T--TSEEEEECSCHHHHHHHHHHCEEEEET
T ss_pred             CC-CEEEEECCCHHHHHHHHHHH----C--CCCEEEEECCHHHHHHHHHCCEEEEEC
T ss_conf             99-88999996599999999997----7--298799988889999999779099309


No 359
>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=20.92  E-value=34  Score=13.18  Aligned_cols=35  Identities=20%  Similarity=0.193  Sum_probs=19.8

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             874599997682147899999999997389983999971
Q gi|254780767|r    2 NSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         2 ~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      .+|||+|.+ .++|--+--.|.+.|+++   +.++.-+|
T Consensus        11 ~~MKI~igs-DHaG~~lK~~l~~~L~~~---g~ev~D~G   45 (155)
T 1o1x_A           11 HHVKIAIAS-DHAAFELKEKVKNYLLGK---GIEVEDHG   45 (155)
T ss_dssp             CCCEEEEEE-CSTTHHHHHHHHHHHHHT---TCEEEECC
T ss_pred             CCEEEEEEE-CCHHHHHHHHHHHHHHHC---CCEEEECC
T ss_conf             763999974-871799999999999987---99899789


No 360
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=20.75  E-value=34  Score=13.16  Aligned_cols=32  Identities=22%  Similarity=0.479  Sum_probs=24.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             4599997682147899999999997389983999971
Q gi|254780767|r    4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG   40 (383)
Q Consensus         4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG   40 (383)
                      ||+.+++|-.||  .|..+.+.|-+. +  .++...+
T Consensus         1 mKVvlVTGas~G--IG~aiA~~la~~-G--a~V~i~~   32 (255)
T 2dkn_A            1 MSVIAITGSASG--IGAALKELLARA-G--HTVIGID   32 (255)
T ss_dssp             -CEEEEETTTSH--HHHHHHHHHHHT-T--CEEEEEE
T ss_pred             CCEEEEECCCCH--HHHHHHHHHHHC-C--CEEEEEE
T ss_conf             949999488779--999999999987-9--9999997


No 361
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A*
Probab=20.70  E-value=35  Score=13.15  Aligned_cols=34  Identities=6%  Similarity=0.264  Sum_probs=26.7

Q ss_pred             CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             2888689851177657999986630134631111
Q gi|254780767|r   87 SKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINY  120 (383)
Q Consensus        87 ~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~y  120 (383)
                      .+||+||.+--=|.-|+.++.+.....++|++=.
T Consensus        34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~~PvlGi   67 (272)
T 2i2c_A           34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGI   67 (272)
T ss_dssp             SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEE
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             8999999989709999999987631799829998


No 362
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=20.70  E-value=35  Score=13.15  Aligned_cols=76  Identities=16%  Similarity=0.360  Sum_probs=43.9

Q ss_pred             EEECCHHHHHCCCEEEECHHHCCEEEHHHH--HHHHHHHHHHHHHHHHHCCCCCCCEEEEE---CHHHHHHHHHHHHHHH
Q ss_conf             997178999478806504445311013674--66459999999999861001288868985---1177657999986630
Q gi|254780767|r   37 VGVGGPSLQKEGLVSLFDFSELSVIGIMQV--VRHLPQFIFRINQTVELIVSSKPDVLLIV---DNPDFTHRVAKRVRKK  111 (383)
Q Consensus        37 ~giGG~~m~~~G~~~~~~~~~l~v~G~~ev--l~~~~~~~~~~~~~~~~i~~~~Pd~vi~i---D~pgFnl~lak~lkk~  111 (383)
                      .++--|.++=+|.-..++.+.++++|-.|.  +.++..=  ..++..+.+.+.+|-++|+-   .-|..-+.+|+.    
T Consensus        29 ~~i~RpGl~L~G~~~~~~~~RIqi~G~~E~~Yl~~l~~e--~r~~~~~~~~~~~~p~iIvt~~~~~~~~l~~~a~~----  102 (314)
T 1ko7_A           29 TDISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDE--ERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKE----  102 (314)
T ss_dssp             SCEECCHHHHTTCCTTCCTTSEEEECHHHHHHHHHSCHH--HHTTHHHHHCCTTCCCEEECTTCCCCHHHHHHHHH----
T ss_pred             CCCCCHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCHH--HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH----
T ss_conf             566767687565665668975999858999999868999--99999999836698789998999999999999998----


Q ss_pred             CCCCCCEE
Q ss_conf             13463111
Q gi|254780767|r  112 MPNLPIIN  119 (383)
Q Consensus       112 ~~~ipvi~  119 (383)
                       .++|++.
T Consensus       103 -~~ipll~  109 (314)
T 1ko7_A          103 -HETPLIT  109 (314)
T ss_dssp             -TTCCEEE
T ss_pred             -HCCEEEE
T ss_conf             -3974998


No 363
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=20.67  E-value=35  Score=13.15  Aligned_cols=36  Identities=25%  Similarity=0.336  Sum_probs=20.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf             599997682147899999999997389983999971789
Q gi|254780767|r    5 KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPS   43 (383)
Q Consensus         5 ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~   43 (383)
                      |+.+++|-.||  .|..+.+.|-+. +.++-+.+.-.+.
T Consensus        14 KvalVTGas~G--IG~aia~~la~~-Ga~V~i~~r~~~~   49 (267)
T 1iy8_A           14 RVVLITGGGSG--LGRATAVRLAAE-GAKLSLVDVSSEG   49 (267)
T ss_dssp             CEEEEETTTSH--HHHHHHHHHHHT-TCEEEEEESCHHH
T ss_pred             CEEEEECCCCH--HHHHHHHHHHHC-CCEEEEEECCHHH
T ss_conf             98999378878--999999999987-9989999788888


No 364
>2jky_A Hypoxanthine-guanine phosphoribosyltransferase; nucleus, cytoplasm, magnesium, GMP complex, FLIP peptide-plane, glycosyltransferase; HET: 5GP; 2.3A {Saccharomyces cerevisiae} PDB: 2jkz_A*
Probab=20.67  E-value=35  Score=13.15  Aligned_cols=37  Identities=16%  Similarity=0.221  Sum_probs=25.6

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECHHHHHH--HHHHHHH
Q ss_conf             999999998610012888689851177657--9999866
Q gi|254780767|r   73 FIFRINQTVELIVSSKPDVLLIVDNPDFTH--RVAKRVR  109 (383)
Q Consensus        73 ~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl--~lak~lk  109 (383)
                      +-+...++.+.|..++||++|+|--.|+-.  .|+..|+
T Consensus        13 i~~~~~~La~~I~~~~pD~IVgI~rGG~i~A~~ls~~L~   51 (213)
T 2jky_A           13 VHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLK   51 (213)
T ss_dssp             HHHHHHTTHHHHHHHCCSEEEECSGGGHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHC
T ss_conf             999999999997588999999989888999999999852


No 365
>2qip_A Protein of unknown function VPA0982; APC85975, structural genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.53  E-value=35  Score=13.13  Aligned_cols=16  Identities=19%  Similarity=0.376  Sum_probs=11.3

Q ss_pred             CCCCCCEEEEECHHHH
Q ss_conf             0128886898511776
Q gi|254780767|r   85 VSSKPDVLLIVDNPDF  100 (383)
Q Consensus        85 ~~~~Pd~vi~iD~pgF  100 (383)
                      .+.++.+.|+||+.-+
T Consensus         6 ~~~~~rvaIfID~~Nl   21 (165)
T 2qip_A            6 SDHKEKIAILVDVQNV   21 (165)
T ss_dssp             CCCCEEEEEEEEHHHH
T ss_pred             CCCCCEEEEEEEHHHH
T ss_conf             7887709999956768


No 366
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=20.52  E-value=35  Score=13.13  Aligned_cols=17  Identities=18%  Similarity=0.429  Sum_probs=6.4

Q ss_pred             HHHHHHCCCCCCCEEEE
Q ss_conf             99986100128886898
Q gi|254780767|r   78 NQTVELIVSSKPDVLLI   94 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~   94 (383)
                      +.+.+.|...+||+|++
T Consensus       135 ~~l~~~i~~~~Pd~v~t  151 (270)
T 3dfi_A          135 EDIESMIAECDPTLVLT  151 (270)
T ss_dssp             HHHHHHHHHHCCSEEEE
T ss_pred             HHHHHHHHHCCCCEEEC
T ss_conf             99999998549978978


No 367
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum tls} SCOP: c.2.1.2
Probab=20.49  E-value=35  Score=13.12  Aligned_cols=25  Identities=20%  Similarity=0.363  Sum_probs=19.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             98745999976821478999999999973
Q gi|254780767|r    1 MNSLKIAVIAGEISGDLLAGDLIKSLKEM   29 (383)
Q Consensus         1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~   29 (383)
                      |+  |+.+++|-.||  .|..+.+.|-+.
T Consensus         1 Mk--KV~lITGas~G--IG~aiA~~la~~   25 (244)
T 2bd0_A            1 MK--HILLITGAGKG--IGRAIALEFARA   25 (244)
T ss_dssp             -C--EEEEEETTTSH--HHHHHHHHHHHH
T ss_pred             CC--CEEEEECCCCH--HHHHHHHHHHHH
T ss_conf             99--88999358868--999999999983


Done!