Query         gi|254780768|ref|YP_003065181.1| hypothetical protein CLIBASIA_03295 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 281
No_of_seqs    128 out of 720
Neff          6.7 
Searched_HMMs 13730
Date          Wed Jun  1 07:12:57 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780768.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1zcza2 c.97.1.4 (A:158-452) A  97.7  0.0011 7.9E-08   42.2  13.7  112  139-274   171-287 (295)
  2 d1g8ma2 c.97.1.4 (A:201-593) A  93.7    0.23 1.7E-05   26.5  12.6  118  141-274   206-385 (393)
  3 d1kjqa2 c.30.1.1 (A:2-112) Gly  92.3    0.29 2.1E-05   25.9   7.1   69    2-71     12-80  (111)
  4 d1hdoa_ c.2.1.2 (A:) Biliverdi  90.2    0.52 3.8E-05   24.2   6.7   70    1-72      3-74  (205)
  5 d1vhqa_ c.23.16.2 (A:) Putativ  89.5    0.57 4.1E-05   23.9   6.4  181    1-200     1-216 (217)
  6 d3etja2 c.30.1.1 (A:1-78) N5-c  89.0    0.14   1E-05   28.0   3.0   37    1-38      1-37  (78)
  7 d1pfka_ c.89.1.1 (A:) ATP-depe  88.4     0.2 1.5E-05   27.0   3.5   75    1-76      2-105 (320)
  8 d2pv7a2 c.2.1.6 (A:92-243) Pre  87.7    0.43 3.1E-05   24.7   4.9   37    1-37      9-45  (152)
  9 d4pfka_ c.89.1.1 (A:) ATP-depe  85.4    0.26 1.9E-05   26.2   2.8   76    1-76      1-104 (319)
 10 d3cuma2 c.2.1.6 (A:1-162) Hydr  85.4    0.64 4.6E-05   23.6   4.7  150    1-166     1-156 (162)
 11 d2g5ca2 c.2.1.6 (A:30-200) Pre  82.8       1 7.3E-05   22.3   4.8   33    1-34      1-33  (171)
 12 d1oi4a1 c.23.16.2 (A:23-192) H  81.7     1.6 0.00011   20.9   6.6  157    2-200     2-166 (170)
 13 d1jfla1 c.78.2.1 (A:1-115) Asp  80.2     1.8 0.00013   20.6   6.1   77    1-77      1-86  (115)
 14 d1jvna2 c.23.16.1 (A:-3-229) G  80.1     1.5 0.00011   21.1   4.9   67    1-70      4-72  (232)
 15 d1udca_ c.2.1.2 (A:) Uridine d  78.6       2 0.00014   20.3   7.8   75    1-76      1-84  (338)
 16 d1n7ha_ c.2.1.2 (A:) GDP-manno  75.2     2.4 0.00018   19.7   6.1   75    2-76      1-90  (339)
 17 d1t2aa_ c.2.1.2 (A:) GDP-manno  74.6     2.5 0.00018   19.6   6.0   75    2-76      1-90  (347)
 18 d1uzma1 c.2.1.2 (A:9-245) beta  74.1     2.6 0.00019   19.5   9.4  164    1-177     6-176 (237)
 19 d1y81a1 c.2.1.8 (A:6-121) Hypo  72.7     2.7  0.0002   19.3   4.6   73    2-74      2-89  (116)
 20 d2arka1 c.23.5.8 (A:1-184) Fla  72.6     2.6 0.00019   19.5   4.4  152    1-171     1-169 (184)
 21 d1q7ra_ c.23.16.1 (A:) Hypothe  70.8     2.8 0.00021   19.2   4.3   57    3-64      8-64  (202)
 22 d2c5aa1 c.2.1.2 (A:13-375) GDP  70.7     3.1 0.00022   19.0   6.2   71    3-75     17-89  (363)
 23 d1lssa_ c.2.1.9 (A:) Ktn Mja21  70.6     2.4 0.00018   19.6   3.9   30    6-35      4-33  (132)
 24 d1id1a_ c.2.1.9 (A:) Rck domai  70.5     2.8  0.0002   19.2   4.2   60    5-68      6-71  (153)
 25 d1jaya_ c.2.1.6 (A:) Coenzyme   70.3     2.3 0.00017   19.8   3.8   33    2-34      1-33  (212)
 26 d2f1ka2 c.2.1.6 (A:1-165) Prep  69.9     2.9 0.00021   19.2   4.2   31    3-34      2-32  (165)
 27 d1ek6a_ c.2.1.2 (A:) Uridine d  68.4     3.4 0.00025   18.7   5.5   76    1-76      1-92  (346)
 28 d1k9vf_ c.23.16.1 (F:) GAT sub  67.7    0.94 6.9E-05   22.4   1.3   29    1-31      1-30  (200)
 29 d2hmva1 c.2.1.9 (A:7-140) Ktn   66.4     2.4 0.00018   19.7   3.2   38    6-43      4-41  (134)
 30 d2q46a1 c.2.1.2 (A:2-253) Hypo  64.5     4.1  0.0003   18.2   5.2   72    1-74      3-77  (252)
 31 d1db3a_ c.2.1.2 (A:) GDP-manno  64.4     4.1  0.0003   18.1   4.6   75    2-76      1-89  (357)
 32 d1rkxa_ c.2.1.2 (A:) CDP-gluco  64.1     4.1  0.0003   18.1   7.2   75    2-76      9-90  (356)
 33 d2d59a1 c.2.1.8 (A:4-142) Hypo  63.2     4.1  0.0003   18.1   3.9   30    3-32     21-53  (139)
 34 d2vzsa5 c.1.8.3 (A:336-674) Ex  61.3     4.6 0.00034   17.8   4.4   28   49-76     36-63  (339)
 35 d2nv0a1 c.23.16.1 (A:1-195) Hy  60.8     4.7 0.00034   17.7   5.0   31    1-32      1-31  (195)
 36 d1xima_ c.1.15.3 (A:) D-xylose  59.1       5 0.00037   17.5   6.1  155  108-271    68-240 (392)
 37 d1kewa_ c.2.1.2 (A:) dTDP-gluc  57.7     5.3 0.00039   17.4   7.3   74    2-76      1-84  (361)
 38 d2fexa1 c.23.16.2 (A:1-188) Hy  57.6     2.1 0.00015   20.1   1.6  161    1-202     1-168 (188)
 39 d1vl0a_ c.2.1.2 (A:) DTDP-4-de  57.6     4.3 0.00032   18.0   3.2  230    1-276     2-236 (281)
 40 d1ulza2 c.30.1.1 (A:1-114) Bio  54.8     5.2 0.00038   17.4   3.3   67    1-67      1-75  (114)
 41 d1thta_ c.69.1.13 (A:) Myristo  53.2     6.2 0.00045   16.9   4.8   62   12-74     46-110 (302)
 42 d2ahra2 c.2.1.6 (A:1-152) Pyrr  53.2     6.3 0.00046   16.9   3.6   30    3-33      2-31  (152)
 43 d2csua1 c.2.1.8 (A:1-129) Acet  52.9     2.4 0.00017   19.7   1.3   75    2-76      9-100 (129)
 44 d2f5va1 c.3.1.2 (A:43-354,A:55  52.8     6.3 0.00046   16.9   3.7   28    5-32      7-34  (379)
 45 d1h5qa_ c.2.1.2 (A:) Mannitol   51.4     6.6 0.00048   16.7  10.9   82    2-83      9-105 (260)
 46 d1pgja2 c.2.1.6 (A:1-178) 6-ph  50.9     6.8 0.00049   16.7   4.3  148    1-167     2-164 (178)
 47 d1iuka_ c.2.1.8 (A:) Hypotheti  50.3     2.9 0.00021   19.1   1.4   31    3-33     15-48  (136)
 48 d2d1pb1 c.114.1.1 (B:1-119) tR  49.3     5.6 0.00041   17.2   2.7   75    1-75      1-82  (119)
 49 d1e5qa1 c.2.1.3 (A:2-124,A:392  46.2       8 0.00058   16.2   4.6   35    2-37      3-37  (182)
 50 d1jx7a_ c.114.1.1 (A:) Hypothe  44.8     8.4 0.00061   16.0   6.4   72    1-75      1-81  (117)
 51 d1i36a2 c.2.1.6 (A:1-152) Cons  43.8     8.7 0.00063   15.9   4.2   28    3-31      2-29  (152)
 52 d2j9ga2 c.30.1.1 (A:1-114) Bio  43.2     8.9 0.00064   15.9   3.6   67    1-67      1-76  (114)
 53 d1e6ua_ c.2.1.2 (A:) GDP-4-ket  42.0     9.2 0.00067   15.8   3.6   34    2-35      3-36  (315)
 54 d2g0wa1 c.1.15.4 (A:10-284) Hy  41.9     9.2 0.00067   15.7   2.9   19  232-250   220-240 (275)
 55 d2i1qa1 a.60.4.1 (A:5-64) DNA   40.9     6.2 0.00045   16.9   1.8   20  226-245     3-22  (60)
 56 d1ko7a1 c.98.2.1 (A:1-129) HPr  40.6     7.1 0.00052   16.5   2.1   43  233-278    71-113 (129)
 57 d1vmka_ c.56.2.1 (A:) Purine n  40.6     9.7 0.00071   15.6   3.1   27   49-75     86-112 (265)
 58 d1jz8a5 c.1.8.3 (A:334-625) be  40.0     9.9 0.00072   15.6   3.2   26   50-75     35-60  (292)
 59 d1n1ea2 c.2.1.6 (A:9-197) Glyc  39.8     9.2 0.00067   15.7   2.6   32    1-33      7-38  (189)
 60 d1vhta_ c.37.1.1 (A:) Dephosph  39.7     9.7 0.00071   15.6   2.7   76    1-88      2-78  (208)
 61 d1jjva_ c.37.1.1 (A:) Dephosph  38.3     8.8 0.00064   15.9   2.3   29    1-29      1-30  (205)
 62 d2hy5b1 c.114.1.1 (B:205-336)   38.2     5.3 0.00039   17.4   1.2   74    1-75      1-82  (132)
 63 d1i24a_ c.2.1.2 (A:) Sulfolipi  37.9      11 0.00077   15.3   4.0   74    2-75      2-100 (393)
 64 d2fy8a1 c.2.1.9 (A:116-244) Po  37.8     4.2  0.0003   18.1   0.6   60    5-68      3-62  (129)
 65 d2np5a1 a.4.1.9 (A:9-77) Trans  37.7     7.3 0.00053   16.4   1.8   49  107-155     4-52  (69)
 66 d1pzna1 a.60.4.1 (A:35-95) DNA  37.3     8.1 0.00059   16.1   2.0   20  226-245     5-24  (61)
 67 d1yqga2 c.2.1.6 (A:1-152) Pyrr  37.3      11 0.00079   15.3   3.8   29    3-32      2-31  (152)
 68 d1qsga_ c.2.1.2 (A:) Enoyl-ACP  36.0      11 0.00083   15.1   4.7   35    2-36      5-42  (258)
 69 d2a9va1 c.23.16.1 (A:1-196) GM  34.3      12 0.00088   15.0   5.0   32    1-32      1-32  (196)
 70 d1gpja2 c.2.1.7 (A:144-302) Gl  34.2      12 0.00088   15.0   3.3   72    5-82     27-100 (159)
 71 d7reqa2 c.23.6.1 (A:561-728) M  34.1      12 0.00089   14.9   7.2   15  112-126    56-70  (168)
 72 d1ycga1 c.23.5.1 (A:251-399) N  33.9      12 0.00089   14.9   5.5  130    3-165     4-148 (149)
 73 d2fywa1 c.135.1.1 (A:1-265) Hy  33.2      13 0.00091   14.8   2.9   20  231-250   206-225 (265)
 74 d2g7la1 a.4.1.9 (A:16-83) Puta  33.1      11 0.00082   15.2   2.2   47  107-153     7-53  (68)
 75 d2gx8a1 c.135.1.1 (A:4-373) Ni  33.1      13 0.00092   14.8   3.1   26  175-200   240-265 (370)
 76 d1yq2a5 c.1.8.3 (A:313-609) be  33.1      13 0.00092   14.8   4.1   24   52-75     36-59  (297)
 77 d2fd5a1 a.4.1.9 (A:1-76) Proba  32.8      13 0.00093   14.8   4.7   49  106-154     9-57  (76)
 78 d1qyca_ c.2.1.2 (A:) Phenylcou  32.7      13 0.00093   14.8   4.5   33    1-33      3-35  (307)
 79 d1qyda_ c.2.1.2 (A:) Pinoresin  32.6      13 0.00093   14.8   4.5   33    1-33      3-35  (312)
 80 d1r0ka2 c.2.1.3 (A:3-126,A:265  32.5      13 0.00094   14.8   4.7   59    1-74      2-60  (150)
 81 d2oi8a1 a.4.1.9 (A:8-86) Putat  31.8      13 0.00096   14.7   2.5   50  106-155    11-60  (79)
 82 d1vpda2 c.2.1.6 (A:3-163) Hydr  31.3      13 0.00098   14.6   4.5  148    3-166     2-155 (161)
 83 d1f0ka_ c.87.1.2 (A:) Peptidog  30.9      14   0.001   14.6   7.3   73    2-74      1-99  (351)
 84 d2iu5a1 a.4.1.9 (A:1-71) Trans  30.0      14   0.001   14.5   5.0   52  106-157     8-59  (71)
 85 d1zk8a1 a.4.1.9 (A:6-77) Trans  29.5      13 0.00091   14.9   1.9   49  106-154     5-53  (72)
 86 d1ks9a2 c.2.1.6 (A:1-167) Keto  29.5      14   0.001   14.4   4.4   33    3-36      2-34  (167)
 87 d1iowa1 c.30.1.2 (A:1-96) D-Al  29.5      14  0.0011   14.4   6.0   35    2-36      3-45  (96)
 88 d1gsoa2 c.30.1.1 (A:-2-103) Gl  29.1      15  0.0011   14.4   4.0   96    6-133     6-102 (105)
 89 d1yaca_ c.33.1.3 (A:) YcaC {Es  28.9     6.9  0.0005   16.6   0.5  114   16-136    41-173 (204)
 90 d1nhpa2 c.3.1.5 (A:120-242) NA  28.9      15  0.0011   14.4   6.5   27    7-33     35-61  (123)
 91 d1oc2a_ c.2.1.2 (A:) dTDP-gluc  28.4      15  0.0011   14.3   6.1   72    1-74      2-82  (346)
 92 d1rh9a1 c.1.8.3 (A:30-399) Bet  27.9      15  0.0011   14.3   2.7   17   53-69     40-56  (370)
 93 d2gena1 a.4.1.9 (A:6-75) Proba  27.5      13 0.00096   14.7   1.7   48  107-154     3-50  (70)
 94 d1xgka_ c.2.1.2 (A:) Negative   27.4      16  0.0011   14.2   4.6   32    2-33      4-35  (350)
 95 d1tksa_ d.115.1.2 (A:) 3,4-dih  27.1      16  0.0012   14.2   4.0   45  232-277   145-195 (202)
 96 d1orra_ c.2.1.2 (A:) CDP-tyvel  27.0      16  0.0012   14.1   6.9   74    3-76      2-83  (338)
 97 d2fq4a1 a.4.1.9 (A:9-77) Trans  26.6     7.1 0.00052   16.5   0.2   47  106-152     6-52  (69)
 98 d3c07a1 a.4.1.9 (A:15-89) Puta  26.4      16  0.0012   14.1   3.0   49  106-154     7-55  (75)
 99 d1mv8a2 c.2.1.6 (A:1-202) GDP-  26.4      16  0.0012   14.1   4.3   31    3-34      2-32  (202)
100 d2hkua1 a.4.1.9 (A:18-87) Puta  25.6      16  0.0011   14.2   1.8   47  107-154     4-50  (70)
101 d2csua2 c.23.4.1 (A:130-290) A  25.6      17  0.0012   14.0   4.0  114    2-129    21-148 (161)
102 d1szpa1 a.60.4.1 (A:81-144) DN  25.2       9 0.00066   15.8   0.6   20  226-245     7-26  (64)
103 d2a35a1 c.2.1.2 (A:4-215) Hypo  25.2      17  0.0012   13.9   4.4   70    2-75      3-73  (212)
104 d1vkma_ c.138.1.1 (A:) Hypothe  25.0      17  0.0013   13.9   2.1  148   16-177    44-223 (292)
105 d1l8qa2 c.37.1.20 (A:77-289) C  24.9      17  0.0013   13.9   3.7  111    9-124    48-185 (213)
106 d1ulsa_ c.2.1.2 (A:) beta-keto  24.8      17  0.0013   13.9  10.0  166    2-177     5-179 (242)
107 d1pb6a1 a.4.1.9 (A:14-85) Hypo  24.6      16  0.0012   14.1   1.7   48  107-154     7-54  (72)
108 d1rkta1 a.4.1.9 (A:2-82) Hypot  24.6      18  0.0013   13.9   2.4   49  106-154    13-61  (81)
109 d1x7fa2 c.1.8.12 (A:1-244) Out  24.4      18  0.0013   13.8   3.8   66    1-73      2-71  (244)
110 d1uh5a_ c.2.1.2 (A:) Enoyl-ACP  24.4      18  0.0013   13.8   4.8   32    2-33      2-36  (329)
111 d3coxa1 c.3.1.2 (A:5-318,A:451  24.3      18  0.0013   13.8   3.5   28    5-32     10-37  (370)
112 d1t56a1 a.4.1.9 (A:22-94) Ethr  24.1      14   0.001   14.5   1.4   49  107-155     6-54  (73)
113 d1v7ba1 a.4.1.9 (A:1-74) Trans  24.1      12  0.0009   14.9   1.1   47  107-153     7-53  (74)
114 d2hyja1 a.4.1.9 (A:8-82) Putat  23.7      16  0.0012   14.1   1.6   49  106-154     7-55  (75)
115 d2gv8a1 c.3.1.5 (A:3-180,A:288  23.4      18  0.0013   13.7   5.2   35    1-36      4-38  (335)
116 d2o7ta1 a.4.1.9 (A:1-78) Trans  23.1      13 0.00097   14.7   1.1   47  107-153    10-56  (78)
117 d2blla1 c.2.1.2 (A:316-657) Po  23.0      19  0.0014   13.7   5.1   74    2-76      1-78  (342)
118 d1z3aa1 c.97.1.2 (A:13-168) tR  22.9      19  0.0014   13.7   5.5   88  150-252     7-107 (156)
119 d2id3a1 a.4.1.9 (A:13-80) Puta  22.9     9.5 0.00069   15.7   0.3   47  106-152     8-54  (68)
120 d2g7sa1 a.4.1.9 (A:3-76) Putat  22.7      11 0.00083   15.1   0.7   47  107-153     7-53  (74)
121 d2q02a1 c.1.15.4 (A:1-271) Put  22.4      19  0.0014   13.6   3.7  180   13-249    51-244 (271)
122 d2i10a1 a.4.1.9 (A:10-78) Puta  21.7      11 0.00079   15.3   0.4   48  106-153     2-49  (69)
123 d1sgma1 a.4.1.9 (A:5-77) Putat  21.5      17  0.0013   13.9   1.4   47  107-153     5-52  (73)
124 d1vq2a_ c.97.1.2 (A:) Deoxycyt  21.4      20  0.0015   13.4   2.6   59  209-280   121-179 (193)
125 d1tg7a5 c.1.8.14 (A:41-394) Be  21.1      20  0.0015   13.4   2.5   55   17-73     41-96  (354)
126 d1rpna_ c.2.1.2 (A:) GDP-manno  20.8      21  0.0015   13.4   6.7   74    2-75      1-82  (321)
127 d1r89a3 d.58.16.2 (A:258-437)   20.8      21  0.0015   13.4   1.9  109   55-191     8-128 (180)
128 d1b22a_ a.60.4.1 (A:) DNA repa  20.5     8.6 0.00062   16.0  -0.3   21  225-245    13-33  (70)
129 d2h7ma1 c.2.1.2 (A:2-269) Enoy  20.3      21  0.0016   13.3   4.4   63    2-64      6-80  (268)

No 1  
>d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=97.71  E-value=0.0011  Score=42.22  Aligned_cols=112  Identities=16%  Similarity=0.071  Sum_probs=83.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCH-----HHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             334554653234788998999999733267225999819748896253421-----799999997543123456677189
Q gi|254780768|r  139 GSLGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGT-----DSMLQRIVDCRNNGRILAGKSGVL  213 (281)
Q Consensus       139 G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGT-----D~mi~R~~~~~~~~~~~~~~~~il  213 (281)
                      -+.|+++|++++++|+.+||.+++..-+=-|   |+++|+..+++=+=+=-     .-.++++++        ..+|+|+
T Consensus       171 ~~vT~~~pt~~e~~dL~FA~~v~k~vkSNAI---vlakn~~tiGiGaGQ~sRvda~~iA~~ka~~--------~~~g~v~  239 (295)
T d1zcza2         171 ELVVGEPLSEKELEDLEFAYRVVEGAKSNAV---LIAKDGVTVGIGSGQPSRKRAAWIATVMAGE--------KAKGAVA  239 (295)
T ss_dssp             EEEESCCCCHHHHHHHHHHHHHHHHSCSSCE---EEEETTEEEEEECSCSSHHHHHHHHHHHHGG--------GGTTCEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHCCCCCE---EEECCCCEEEEECCCHHHHHHHHHHHHHHHH--------HHCCCEE
T ss_conf             4774476643343437999999864576627---9962881787504322367776666765445--------4248279


Q ss_pred             EEECCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEE
Q ss_conf             9934888753121066279999999984990999973977998589999999987968999
Q gi|254780768|r  214 VKMCKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCG  274 (281)
Q Consensus       214 vK~~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g  274 (281)
                      .          -|=.-=-+++|+.++++|++.|+ +.|+++  .-+++|+.||++||..+=
T Consensus       240 a----------SDAFFPF~D~i~~a~~~Gv~aIi-qPGGSi--rD~evI~aan~~gi~m~f  287 (295)
T d1zcza2         240 A----------SDAFFPFPDSLEILAQAGVKAVV-APLGSI--RDEEVIEKARELGITFYK  287 (295)
T ss_dssp             E----------ESSCCSSHHHHHHHHHTTCCEEE-ECCCCT--THHHHHHHHHHHTCEEEE
T ss_pred             E----------CCCCCCCCHHHHHHHHCCCEEEE-CCCCCC--CCHHHHHHHHHHCCEEEE
T ss_conf             7----------24576885689999985994999-899864--639999999985978998


No 2  
>d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.68  E-value=0.23  Score=26.54  Aligned_cols=118  Identities=16%  Similarity=0.113  Sum_probs=77.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECC-----CCHHHHHHHHHHHHHHCCC----------
Q ss_conf             4554653234788998999999733267225999819748896253-----4217999999975431234----------
Q gi|254780768|r  141 LGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGI-----EGTDSMLQRIVDCRNNGRI----------  205 (281)
Q Consensus       141 l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~-----eGTD~mi~R~~~~~~~~~~----------  205 (281)
                      -+.++|+++++.|+.+||++++..-+=-|   |+++|+..++|=+=     .=+.-.++++++..-+...          
T Consensus       206 ~~~~~pt~~e~~dL~FAwkVvK~vKSNAI---vlak~~~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~  282 (393)
T d1g8ma2         206 TKNKTLPESAVRDLIVASIAVKYTQSNSV---CYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAG  282 (393)
T ss_dssp             SSSCCCCHHHHHHHHHHHHHHHTSCSSCE---EEEETTEEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEE---EEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             02345168899999999999862366458---996298688318997654789999999998877640630110000001


Q ss_pred             -----------------------------------------------CCCCCEEEEEECCCCCCCEEEECCCCHHHHHHH
Q ss_conf             -----------------------------------------------566771899934888753121066279999999
Q gi|254780768|r  206 -----------------------------------------------LAGKSGVLVKMCKSQQDMRADLPSIGAKTVQNV  238 (281)
Q Consensus       206 -----------------------------------------------~~~~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~~  238 (281)
                                                                     ..-.|.|+.=      |==  +|-  ++.|+.+
T Consensus       283 ~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l~~~~~~~~~~~~~g~vlAS------DAF--FPF--~D~ie~a  352 (393)
T d1g8ma2         283 VKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSS------DAF--FPF--RDNVDRA  352 (393)
T ss_dssp             CCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCCCHHHHHHHHTTCCCEEEEE------SSC--CSS--THHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEE------CCC--CCC--CHHHHHH
T ss_conf             345555416776513543320355666554201431123788764430357857980------268--687--5689999


Q ss_pred             HHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEE
Q ss_conf             984990999973977998589999999987968999
Q gi|254780768|r  239 IKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCG  274 (281)
Q Consensus       239 ~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g  274 (281)
                      +++|.+.| |+.|+++  .-+++|+.||++||..+=
T Consensus       353 a~~Gv~aI-iQPGGSi--rD~evI~aan~~~i~M~f  385 (393)
T d1g8ma2         353 KRIGVQFI-VAPSGSA--ADEVVIEACNELGITLIH  385 (393)
T ss_dssp             HTTTEEEE-EEECCCT--THHHHHHHHHHHTCEEEE
T ss_pred             HHCCCEEE-ECCCCCC--CHHHHHHHHHHHCCEEEE
T ss_conf             98599399-8798742--519999999985988998


No 3  
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=92.26  E-value=0.29  Score=25.86  Aligned_cols=69  Identities=19%  Similarity=0.142  Sum_probs=47.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             7399997798038999999997899789999548667310388567873899999999998649540677
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      .||||+ |+|.|-+.++.++++-|++++++.-...+....-...+...++.+...+.++.++.+++-+.+
T Consensus        12 ~kigIl-GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          12 TRVMLL-GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CEEEEE-SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEE-ECCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEE
T ss_conf             799999-377989999999998899899984999983655177689988789999999998627756888


No 4  
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.21  E-value=0.52  Score=24.18  Aligned_cols=70  Identities=9%  Similarity=-0.048  Sum_probs=48.4

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC--CCCCEEEEEHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             97399997798038999999997899789999548667310--3885678738999999999986495406770
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW--QDFECRELPLGDFCVLRSILHQYNIGRIVVA   72 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~ivma   72 (281)
                      |+||.|+.|.|.+=..+++.+.++|+++.++.-....-+..  .+.+....++.+...+-+.++  +++-|+.+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC--CCCEEEEE
T ss_conf             8889999998789999999999786989999837164554212353201122211456999865--98789998


No 5  
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}
Probab=89.47  E-value=0.57  Score=23.91  Aligned_cols=181  Identities=13%  Similarity=0.123  Sum_probs=93.7

Q ss_pred             CCEEEEE-EC----CCCHHH---HHHHHHHHCCCCEEEEEECCCCCCCCCCC---C-EEEEEHH-HHHH-------HHHH
Q ss_conf             9739999-77----980389---99999997899789999548667310388---5-6787389-9999-------9999
Q gi|254780768|r    1 MKRLLII-AG----SGMLPY---YVAKAARLKNDEPVIASVLNECSFDWQDF---E-CRELPLG-DFCV-------LRSI   60 (281)
Q Consensus         1 M~kigII-AG----~G~LP~---~ia~~~~~~g~~~~ii~l~~~~~~~~~~~---~-~~~~~ig-~ig~-------li~~   60 (281)
                      |+|+++| +|    .|.-..   .....++++|+++.+++..+.........   . ....++- +-..       -++.
T Consensus         1 MkKvaviLsg~g~~DG~E~~E~~~~~~~L~raG~~v~~~sp~~~~~~~~~h~~~~~~~~~r~~~~~~~~i~~~~~~~l~~   80 (217)
T d1vhqa_           1 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQ   80 (217)
T ss_dssp             CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGG
T ss_pred             CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHH
T ss_conf             98799995588887742098999999999988998999946998452150688862354235243210230135687678


Q ss_pred             HHHCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCC
Q ss_conf             98649540677024232100011102603578999999875104803589999999997697482112225242035433
Q gi|254780768|r   61 LHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGS  140 (281)
Q Consensus        61 Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~  140 (281)
                      .+...-+-+++.|+..  + ..++. +.       ..... .-+-|..+.+.+..+.++.+  .+++-=..|-+++..+.
T Consensus        81 v~~~~yDaliiPGG~g--~-~~~l~-~~-------~~~~~-~~~~~~~v~~li~~~~~~gk--~iaaIC~gp~~l~~~~~  146 (217)
T d1vhqa_          81 ADAAELDALIVPGGFG--A-AKNLS-NF-------ASLGS-ECTVDRELKALAQAMHQAGK--PLGFMCIAPAMLPKIFD  146 (217)
T ss_dssp             CCGGGCSEEEECCSTH--H-HHTSB-CH-------HHHGG-GCCBCHHHHHHHHHHHHTTC--CEEEETTGGGGHHHHCS
T ss_pred             CCHHHCCEEEECCCCC--C-HHHHH-HH-------HCCCC-CCCCCHHHHHHHHHHHHCCC--CEEEECHHHHHHHHHHC
T ss_conf             8984787899669866--3-77776-52-------10242-12228999999999998699--79998860899999846


Q ss_pred             CCCC-CCCHHHHHHHHHHHHHHHHHCC----CCCEEEEEEECCEEEE----------EECCCCHHHHHHHHHHHH
Q ss_conf             4554-6532347889989999997332----6722599981974889----------625342179999999754
Q gi|254780768|r  141 LGTC-VPNRDVKRDILAAMKSAEALSE----LDVGQSAVSIGGRVVA----------LEGIEGTDSMLQRIVDCR  200 (281)
Q Consensus       141 l~~~-~p~~~~~~dI~~g~~i~~~l~~----~DiGQsvVv~~g~Via----------iEa~eGTD~mi~R~~~~~  200 (281)
                      +.++ ..+.  ..+.   .+-+++.|.    .++.+.||..+|.++.          .|.++|=++|+.++-++.
T Consensus       147 ~~~~~~~~~--~~~~---~~~l~~~Ga~~v~~~~~~~vVD~dg~ivTspA~m~a~~i~e~~~gi~klv~~~l~l~  216 (217)
T d1vhqa_         147 FPLRLTIGT--DIDT---AEVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLA  216 (217)
T ss_dssp             SCCEECCCS--CHHH---HHHHHHTTCEECCCCTTCCEEETTTTEEEECGGGTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEECC--CHHH---HHHHHHCCCCEEECCCCEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             488715415--8535---999997699089656773899669989926312048789999999999999999864


No 6  
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}
Probab=88.98  E-value=0.14  Score=28.04  Aligned_cols=37  Identities=19%  Similarity=0.178  Sum_probs=31.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf             97399997798038999999997899789999548667
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECS   38 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~   38 (281)
                      |+++||| |+|.|-+..+.++..-|+++.++.......
T Consensus         1 ~k~vgIl-G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           1 MKQVCVL-GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             CEEEEEE-BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CCEEEEE-CCCHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf             9789997-487899999999998699799986999883


No 7  
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=88.37  E-value=0.2  Score=26.96  Aligned_cols=75  Identities=19%  Similarity=0.115  Sum_probs=48.4

Q ss_pred             CCEEEEEECCCCHHH------HHHHHHHHCCCCEEEEEECCCC---C--------CCCCCC---------CEE---EEEH
Q ss_conf             973999977980389------9999999789978999954866---7--------310388---------567---8738
Q gi|254780768|r    1 MKRLLIIAGSGMLPY------YVAKAARLKNDEPVIASVLNEC---S--------FDWQDF---------ECR---ELPL   51 (281)
Q Consensus         1 M~kigIIAG~G~LP~------~ia~~~~~~g~~~~ii~l~~~~---~--------~~~~~~---------~~~---~~~i   51 (281)
                      |+||||+-+.|.=|-      -+.+.+...|++++-+. .|..   +        .....+         .+.   ...-
T Consensus         2 mkrIgIltsGG~~pg~Na~i~~~v~~~~~~~~~v~g~~-~G~~Gl~~~~~~~l~~~~v~~~~~~gGs~lgt~R~~~~~~~   80 (320)
T d1pfka_           2 IKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIY-DGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDE   80 (320)
T ss_dssp             CCEEEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEES-THHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCGGGGSH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf             86499986688866889999999999987899899994-66888727985729999998898469985231478877665


Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             9999999999864954067702423
Q gi|254780768|r   52 GDFCVLRSILHQYNIGRIVVAGAID   76 (281)
Q Consensus        52 g~ig~li~~Lk~~~i~~ivmaG~V~   76 (281)
                      ....++++.|++++++.++.+|+-.
T Consensus        81 ~~~~~~~~~l~~~~I~~li~iGG~~  105 (320)
T d1pfka_          81 NIRAVAIENLKKRGIDALVVIGGDG  105 (320)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf             5550388899876998899967965


No 8  
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}
Probab=87.74  E-value=0.43  Score=24.74  Aligned_cols=37  Identities=19%  Similarity=0.201  Sum_probs=32.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             9739999779803899999999789978999954866
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC   37 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~   37 (281)
                      |+|+++|.|.|..=.-+|+.++++|+++.+.......
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf             8869999688978999999999769973851331021


No 9  
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=85.44  E-value=0.26  Score=26.17  Aligned_cols=76  Identities=20%  Similarity=0.065  Sum_probs=50.1

Q ss_pred             CCEEEEEECCCCHHH------HHHHHHHHCCCCEEEEE--ECCCCCCC---C-----CCC---------CEE---EEEHH
Q ss_conf             973999977980389------99999997899789999--54866731---0-----388---------567---87389
Q gi|254780768|r    1 MKRLLIIAGSGMLPY------YVAKAARLKNDEPVIAS--VLNECSFD---W-----QDF---------ECR---ELPLG   52 (281)
Q Consensus         1 M~kigIIAG~G~LP~------~ia~~~~~~g~~~~ii~--l~~~~~~~---~-----~~~---------~~~---~~~ig   52 (281)
                      |+||||+-..|.=|.      -+.+.+...|.+++-+.  +.|..+.+   +     ..+         .+.   ...-.
T Consensus         1 mkrIaIl~sGG~~pgiNa~i~~~v~~~~~~~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~~~~~   80 (319)
T d4pfka_           1 MKRIGVLTSGGDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTEE   80 (319)
T ss_dssp             CCEEEEEEESSCCTTHHHHHHHHHHHHHHTTCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTSSSHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             98899987688768999999999999987799999983166875679951599899987986486300358888655410


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             999999999864954067702423
Q gi|254780768|r   53 DFCVLRSILHQYNIGRIVVAGAID   76 (281)
Q Consensus        53 ~ig~li~~Lk~~~i~~ivmaG~V~   76 (281)
                      +..++++.|++++++.++.+|+-.
T Consensus        81 ~~~~~~~~l~~~~I~~li~iGG~~  104 (319)
T d4pfka_          81 GQKKGIEQLKKHGIQGLVVIGGDG  104 (319)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEECHH
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCH
T ss_conf             044699999983366389953836


No 10 
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=85.42  E-value=0.64  Score=23.57  Aligned_cols=150  Identities=12%  Similarity=0.013  Sum_probs=82.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE-EEHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             973999977980389999999978997899995486673103885678-7389999999999864954067702423210
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRE-LPLGDFCVLRSILHQYNIGRIVVAGAIDRRP   79 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~-~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP   79 (281)
                      |+|+|+| |-|..=..+|+.+.++|+++++..........+....... -...      +.++.  ++-++.+=..  .+
T Consensus         1 M~kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~------e~~~~--~diii~~v~~--~~   69 (162)
T d3cuma2           1 MKQIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSAR------DAVQG--ADVVISMLPA--SQ   69 (162)
T ss_dssp             CCEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHH------HHHTS--CSEEEECCSC--HH
T ss_pred             CCEEEEE-EEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHHH------HHCCC--CCEEEECCCC--HH
T ss_conf             9999999-778999999999997799689997830145553211001110034------44036--6701222454--06


Q ss_pred             CHHHHCCCHHHHHHHHHHH-----HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0011102603578999999-----87510480358999999999769748211222524203543345546532347889
Q gi|254780768|r   80 NVQDLCFSIKDSLRISKMI-----WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus        80 ~~~~l~~D~~~~~~l~k~l-----~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      ...........   +...+     .-.....+-..-+.+.+.+++.|++.+++.-.-..--+..|.++---..  +...+
T Consensus        70 ~~~~v~~~~~~---~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~~a~~G~l~~~~gG--~~~~~  144 (162)
T d3cuma2          70 HVEGLYLDDDG---LLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGG--DAEAL  144 (162)
T ss_dssp             HHHHHHHSTTC---HHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEES--CHHHH
T ss_pred             HHHHHHHCCCC---CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECC--CHHHH
T ss_conf             58988734333---22358999889978988878999999999977992893515668322355874899618--99999


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             989999997332
Q gi|254780768|r  155 LAAMKSAEALSE  166 (281)
Q Consensus       155 ~~g~~i~~~l~~  166 (281)
                      +.-..+++.+++
T Consensus       145 ~~~~~il~~~~~  156 (162)
T d3cuma2         145 EKARPLFEAMGR  156 (162)
T ss_dssp             HHHHHHHHHHEE
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999999718


No 11 
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=82.84  E-value=1  Score=22.26  Aligned_cols=33  Identities=27%  Similarity=0.276  Sum_probs=29.0

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             9739999779803899999999789978999954
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVL   34 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~   34 (281)
                      |+||+|| |-|..=--+|++++++|+...+.++.
T Consensus         1 Mk~I~II-G~G~mG~sla~~L~~~g~~~~I~~~D   33 (171)
T d2g5ca2           1 MQNVLIV-GVGFMGGSFAKSLRRSGFKGKIYGYD   33 (171)
T ss_dssp             CCEEEEE-SCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCEEEEE-CCCHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             9789999-41989999999999639970899997


No 12 
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]}
Probab=81.73  E-value=1.6  Score=20.94  Aligned_cols=157  Identities=12%  Similarity=0.095  Sum_probs=90.3

Q ss_pred             CEEEEEECCCCHHHHH---HHHHHHCCCCEEEEEECCCCCCCCCC--CCEE-EEEHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             7399997798038999---99999789978999954866731038--8567-8738999999999986495406770242
Q gi|254780768|r    2 KRLLIIAGSGMLPYYV---AKAARLKNDEPVIASVLNECSFDWQD--FECR-ELPLGDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus         2 ~kigIIAG~G~LP~~i---a~~~~~~g~~~~ii~l~~~~~~~~~~--~~~~-~~~ig~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      +||+|+...|--..++   .+.++.+|+++.++...+........  ..+. ...+.+       ......+=+++.|+.
T Consensus         2 KkIail~~dgf~~~E~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~~~~~v~~d~~l~~-------~~~~~yDalivpGG~   74 (170)
T d1oi4a1           2 KKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDE-------VTPAEFDALLLPGGH   74 (170)
T ss_dssp             CEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGGG-------CCGGGCSEEEECCBT
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEECCCCHHH-------CCHHHCEEEEECCCH
T ss_conf             8899994798379999999999997899899624789944665036717955871799-------895156299972404


Q ss_pred             CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHH--HHH
Q ss_conf             321000111026035789999998751048035899999999976974821122252420354334554653234--788
Q gi|254780768|r   76 DRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDV--KRD  153 (281)
Q Consensus        76 ~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~--~~d  153 (281)
                      .  |.                .+     ..|..+++.+..++++.+  .+.+-=.-|-+|+..|++.+++.+...  ..+
T Consensus        75 ~--~~----------------~l-----~~~~~~~~~i~~~~~~~k--~i~aiC~g~~~La~~glL~g~~~T~~~~~~~~  129 (170)
T d1oi4a1          75 S--PD----------------YL-----RGDNRFVTFTRDFVNSGK--PVFAICHGPQLLISADVIRGRKLTAVKPIIID  129 (170)
T ss_dssp             H--HH----------------HH-----TTSHHHHHHHHHHHHTTC--CEEEETTTHHHHHHHTCCTTCEECCCGGGHHH
T ss_pred             H--HH----------------HH-----CCCHHHHHHHHHHHHCCC--EEEECCCCHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             6--65----------------64-----248378999998863178--14520223477765432025555567508999


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             99899999973326722599981974889625342179999999754
Q gi|254780768|r  154 ILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCR  200 (281)
Q Consensus       154 I~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~  200 (281)
                      +       +..+..=+-|.+||.+++++.-   .|...+...+..+.
T Consensus       130 l-------~~~g~~~~~~~~VVdd~~liTs---~g~~~~~~fa~~~i  166 (170)
T d1oi4a1         130 V-------KNAGAEFYDQEVVVDKDQLVTS---RTPDDLPAFNREAL  166 (170)
T ss_dssp             H-------HHTTCEECCSSCEEETTTEEEE---SSGGGHHHHHHHHH
T ss_pred             H-------HHCCCEEECCCEEEECCEEEEC---CCHHHHHHHHHHHH
T ss_conf             9-------9679989469889999979989---98406999999999


No 13 
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=80.19  E-value=1.8  Score=20.60  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=42.7

Q ss_pred             CCEEEEEECCCCHHHH-HHHHHHHCC-------CCEEE-EEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             9739999779803899-999999789-------97899-99548667310388567873899999999998649540677
Q gi|254780768|r    1 MKRLLIIAGSGMLPYY-VAKAARLKN-------DEPVI-ASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         1 M~kigIIAG~G~LP~~-ia~~~~~~g-------~~~~i-i~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      |++||||.|-|-..-. +.+.+....       +..++ .......+....-....+-+...+...++.|.+.|++-++|
T Consensus         1 Mk~IGIIGGmgp~at~~yy~~i~~~~~~~~d~~~~~~il~s~~~~~~r~~~~~~~~~~~~~~l~~~~~~Le~~Ga~~i~i   80 (115)
T d1jfla1           1 MKTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIM   80 (115)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             97888846719899999999999998876489788125033687878999975242204799999999999669999997


Q ss_pred             ECCCCC
Q ss_conf             024232
Q gi|254780768|r   72 AGAIDR   77 (281)
Q Consensus        72 aG~V~k   77 (281)
                      +-.-.+
T Consensus        81 ~cNT~H   86 (115)
T d1jfla1          81 PCNTAH   86 (115)
T ss_dssp             SCTGGG
T ss_pred             CCCHHH
T ss_conf             675899


No 14 
>d1jvna2 c.23.16.1 (A:-3-229) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]}
Probab=80.14  E-value=1.5  Score=21.05  Aligned_cols=67  Identities=18%  Similarity=0.213  Sum_probs=47.6

Q ss_pred             CCEEEEEE-CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEE-HHHHHHHHHHHHHCCCCEEE
Q ss_conf             97399997-798038999999997899789999548667310388567873-89999999999864954067
Q gi|254780768|r    1 MKRLLIIA-GSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELP-LGDFCVLRSILHQYNIGRIV   70 (281)
Q Consensus         1 M~kigIIA-G~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~-ig~ig~li~~Lk~~~i~~iv   70 (281)
                      |++|+||= |.|++.. ++++++..|.++.++.  ...+..+++++...+| +|.++...+.|+..+..+.+
T Consensus         4 m~~I~IiDyg~gN~~S-v~~al~~lG~~~~ii~--~~~~~~l~~~d~IILPGvG~f~~~m~~L~~~~l~~~i   72 (232)
T d1jvna2           4 MPVVHVIDVESGNLQS-LTNAIEHLGYEVQLVK--SPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPI   72 (232)
T ss_dssp             SCEEEEECCSCSCCHH-HHHHHHHTTCEEEEES--SGGGCCSTTCSCEEEEECSCHHHHHHHHHHTTCHHHH
T ss_pred             CCEEEEEECCCCHHHH-HHHHHHHCCCCEEEEE--CCCHHHHHCCCEEEECCCCCCCCHHHHHCCCCHHHHH
T ss_conf             9999999789868999-9999998699769998--8427656228869980478750033420020000011


No 15 
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=78.59  E-value=2  Score=20.28  Aligned_cols=75  Identities=16%  Similarity=0.219  Sum_probs=55.4

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-------CC--CCCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             973999977980389999999978997899995486673-------10--388567873899999999998649540677
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF-------DW--QDFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-------~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      |+ +-|+.|+|-+=..+++.+.++|++++++.-......       ..  .++.+...++.+...+.+.++..+++.|+-
T Consensus         1 MK-iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MR-VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CE-EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE
T ss_conf             97-99989887899999999997849799997888752656777886247887799901689899999874169989999


Q ss_pred             ECCCC
Q ss_conf             02423
Q gi|254780768|r   72 AGAID   76 (281)
Q Consensus        72 aG~V~   76 (281)
                      .....
T Consensus        80 lAa~~   84 (338)
T d1udca_          80 FAGLK   84 (338)
T ss_dssp             CCSCC
T ss_pred             CCCCC
T ss_conf             98766


No 16 
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.17  E-value=2.4  Score=19.66  Aligned_cols=75  Identities=13%  Similarity=0.014  Sum_probs=52.1

Q ss_pred             CEEEEE-ECCCCHHHHHHHHHHHCCCCEEEEEECCCC-C-------------CCCCCCCEEEEEHHHHHHHHHHHHHCCC
Q ss_conf             739999-779803899999999789978999954866-7-------------3103885678738999999999986495
Q gi|254780768|r    2 KRLLII-AGSGMLPYYVAKAARLKNDEPVIASVLNEC-S-------------FDWQDFECRELPLGDFCVLRSILHQYNI   66 (281)
Q Consensus         2 ~kigII-AG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~-------------~~~~~~~~~~~~ig~ig~li~~Lk~~~i   66 (281)
                      +|.+|| .|+|-+=..+++.+.++|++++.+...... +             .....+.+...++.....+.+.++..++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC
T ss_conf             99899968864899999999997849899997888555514366654223340456459997636688999999864134


Q ss_pred             CEEEEECCCC
Q ss_conf             4067702423
Q gi|254780768|r   67 GRIVVAGAID   76 (281)
Q Consensus        67 ~~ivmaG~V~   76 (281)
                      +.|+-+....
T Consensus        81 D~Vih~Aa~~   90 (339)
T d1n7ha_          81 DEVYNLAAQS   90 (339)
T ss_dssp             SEEEECCSCC
T ss_pred             CHHHHCCCCC
T ss_conf             1122012213


No 17 
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.57  E-value=2.5  Score=19.56  Aligned_cols=75  Identities=17%  Similarity=0.050  Sum_probs=51.5

Q ss_pred             CEEEEE-ECCCCHHHHHHHHHHHCCCCEEEEEECCCC-C----------CC---CCCCCEEEEEHHHHHHHHHHHHHCCC
Q ss_conf             739999-779803899999999789978999954866-7----------31---03885678738999999999986495
Q gi|254780768|r    2 KRLLII-AGSGMLPYYVAKAARLKNDEPVIASVLNEC-S----------FD---WQDFECRELPLGDFCVLRSILHQYNI   66 (281)
Q Consensus         2 ~kigII-AG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~----------~~---~~~~~~~~~~ig~ig~li~~Lk~~~i   66 (281)
                      +||+|| .|+|-+=..+.+.+.++|++++.+...... +          ..   ..++.+...++.+...+...+...++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEEEEECCCCHHHHHHHHHCCC
T ss_conf             98899904776899999999997839899998887545501278875353553247818999146780654788863565


Q ss_pred             CEEEEECCCC
Q ss_conf             4067702423
Q gi|254780768|r   67 GRIVVAGAID   76 (281)
Q Consensus        67 ~~ivmaG~V~   76 (281)
                      ..++-+....
T Consensus        81 ~~v~~~~a~~   90 (347)
T d1t2aa_          81 TEIYNLGAQS   90 (347)
T ss_dssp             SEEEECCSCC
T ss_pred             CEEEEEEECC
T ss_conf             3133200013


No 18 
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=74.15  E-value=2.6  Score=19.49  Aligned_cols=164  Identities=10%  Similarity=0.056  Sum_probs=92.6

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE---EHHHHHHHHHHHHHC--CCCEEEEECC
Q ss_conf             973999977980-3899999999789978999954866731038856787---389999999999864--9540677024
Q gi|254780768|r    1 MKRLLIIAGSGM-LPYYVAKAARLKNDEPVIASVLNECSFDWQDFECREL---PLGDFCVLRSILHQY--NIGRIVVAGA   74 (281)
Q Consensus         1 M~kigIIAG~G~-LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~---~ig~ig~li~~Lk~~--~i~~ivmaG~   74 (281)
                      ++|.+||.|.+. +=..+++.+.+.|.+++++....+....   ......   +..++.++++...++  .++-+|-.=.
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHCC---CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             99879992788889999999999879989999799330067---538997538999999999999985698328986500


Q ss_pred             CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-EEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             232100011102603578999999875104803589999999997697-4821122252420354334554653234788
Q gi|254780768|r   75 IDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGV-SVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus        75 V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~-~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      +..+..+.+...+     ...+.+ ...-.+--.+.+.++..+.+++. +++-........ ..++.. ....+|...  
T Consensus        83 ~~~~~~~~~~~~e-----~~~~~~-~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-~~~~~~-~Y~asKaal--  152 (237)
T d1uzma1          83 LSADAFLMRMTEE-----KFEKVI-NANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-GIGNQA-NYAASKAGV--  152 (237)
T ss_dssp             CCC-----CCCHH-----HHHHHH-HHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------CCH-HHHHHHHHH--
T ss_pred             CCCCCCHHHCCHH-----HHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCC-CCCCCH-HHHHHHHHH--
T ss_conf             1010017658999-----999998-765410024444101001436788637871355446-775527-789999999--


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf             998999999733267225999819
Q gi|254780768|r  154 ILAAMKSAEALSELDVGQSAVSIG  177 (281)
Q Consensus       154 I~~g~~i~~~l~~~DiGQsvVv~~  177 (281)
                      ..+...++.++++..|-=.+|.-+
T Consensus       153 ~~lt~~lA~e~~~~gIrVN~I~PG  176 (237)
T d1uzma1         153 IGMARSIARELSKANVTANVVAPG  176 (237)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             999998776531478106355207


No 19 
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=72.67  E-value=2.7  Score=19.33  Aligned_cols=73  Identities=8%  Similarity=-0.049  Sum_probs=42.7

Q ss_pred             CEEEEEECC---CCHHHHHHHHHHHCCCCEEEEEECCCCC------CCCC------CCCEEEEEHHHHHHHHHHHHHCCC
Q ss_conf             739999779---8038999999997899789999548667------3103------885678738999999999986495
Q gi|254780768|r    2 KRLLIIAGS---GMLPYYVAKAARLKNDEPVIASVLNECS------FDWQ------DFECRELPLGDFCVLRSILHQYNI   66 (281)
Q Consensus         2 ~kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~l~~~~~------~~~~------~~~~~~~~ig~ig~li~~Lk~~~i   66 (281)
                      +.+|+|.-+   +.+-..+.+.+...|++++-+.-.....      +.+.      +......+=.....+++.+.+.++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp~~~~~~~l~~~~~~g~   81 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVEAGF   81 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCEEEEEEECHHHHHHHHHHHHHCCC
T ss_conf             67999842699998099999999988997999813342215854556611102110379998178999999999986699


Q ss_pred             CEEEEECC
Q ss_conf             40677024
Q gi|254780768|r   67 GRIVVAGA   74 (281)
Q Consensus        67 ~~ivmaG~   74 (281)
                      +.+.|-+.
T Consensus        82 k~v~~~~g   89 (116)
T d1y81a1          82 KKLWFQPG   89 (116)
T ss_dssp             CEEEECTT
T ss_pred             CEEEECCC
T ss_conf             65885065


No 20 
>d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]}
Probab=72.57  E-value=2.6  Score=19.48  Aligned_cols=152  Identities=17%  Similarity=0.141  Sum_probs=77.9

Q ss_pred             CCEEEEEECCC-----CHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCEEEE----EH----HHHHHHHHHHHHCCC
Q ss_conf             97399997798-----038999999997-89978999954866731038856787----38----999999999986495
Q gi|254780768|r    1 MKRLLIIAGSG-----MLPYYVAKAARL-KNDEPVIASVLNECSFDWQDFECREL----PL----GDFCVLRSILHQYNI   66 (281)
Q Consensus         1 M~kigIIAG~G-----~LP~~ia~~~~~-~g~~~~ii~l~~~~~~~~~~~~~~~~----~i----g~ig~li~~Lk~~~i   66 (281)
                      |+|+.||-++.     .+...|++.++. .|.++.+..+..-...++.+++-..+    ..    +++...++.+...--
T Consensus         1 M~kilivy~S~~G~T~~~A~~ia~g~~~~~g~~v~~~~~~~~~~~dl~~~d~iiiGsPty~g~~~~~~~~fld~~~~~~~   80 (184)
T d2arka1           1 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLW   80 (184)
T ss_dssp             CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHTGGGTT
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             98699999899838999999999855334695699940234452205328678982574023447999999998778877


Q ss_pred             CEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHC-CCCC-CCCCC
Q ss_conf             406770242321000111026035789999998751048035899999999976974821122252420-3543-34554
Q gi|254780768|r   67 GRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELL-VQVG-SLGTC  144 (281)
Q Consensus        67 ~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll-~~~G-~l~~~  144 (281)
                      .+  +.|++-  -.|.               .......|+...+..+...+...|+.+++..+...... .+.| ...+.
T Consensus        81 ~~--l~gK~~--a~f~---------------s~g~~~gG~e~al~~~~~~l~~~G~~vvg~~~~~~~~~~~~~g~~~~~~  141 (184)
T d2arka1          81 GE--IDGKIA--CAFS---------------SSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGKKFTLHYGAVVAGE  141 (184)
T ss_dssp             TS--CTTCEE--EEEE---------------EESSBTSSHHHHHHHHHHHHHHTTCEECCEEEEEETTEEESSSEEEESS
T ss_pred             HH--HCCEEE--EEEE---------------CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             87--589699--9998---------------1688884289999986167640887796246445656678777514899


Q ss_pred             CCCHHHHHHH-HHHHHHHHHHCCCCCEE
Q ss_conf             6532347889-98999999733267225
Q gi|254780768|r  145 VPNRDVKRDI-LAAMKSAEALSELDVGQ  171 (281)
Q Consensus       145 ~p~~~~~~dI-~~g~~i~~~l~~~DiGQ  171 (281)
                      .|++++.+.. .+|.++++....+--|+
T Consensus       142 ~~~~~dl~~a~~lGk~lAe~~~~l~~gr  169 (184)
T d2arka1         142 PRSEEEKEACRRLGRRLAEWVAIFVDGR  169 (184)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9499999999999999999999999755


No 21 
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=70.75  E-value=2.8  Score=19.21  Aligned_cols=57  Identities=18%  Similarity=0.268  Sum_probs=34.4

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             39999779803899999999789978999954866731038856787389999999999864
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQY   64 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~   64 (281)
                      |||||+-.|++ ..+++++++.|.++.++.-.    .++.+++...++=|......+.+++.
T Consensus         8 kIgii~~~Gn~-~s~~~al~~~G~~~~~v~~~----~~l~~~D~lIlPGG~~~~~~~~l~~~   64 (202)
T d1q7ra_           8 KIGVLGLQGAV-REHVRAIEACGAEAVIVKKS----EQLEGLDGLVLPGGESTTMRRLIDRY   64 (202)
T ss_dssp             EEEEESCGGGC-HHHHHHHHHTTCEEEEECSG----GGGTTCSEEEECCCCHHHHHHHHHHT
T ss_pred             EEEEEECCCCH-HHHHHHHHHCCCCEEEECCH----HHHHCCCEEEECCCCCHHHHHHHHHH
T ss_conf             79999789989-99999999879929998998----99712898998798847999876666


No 22 
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=70.70  E-value=3.1  Score=18.97  Aligned_cols=71  Identities=10%  Similarity=0.062  Sum_probs=44.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             3999977980389999999978997899995486673--103885678738999999999986495406770242
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF--DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~--~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      ||-|..|+|-+=..+++.+.++|++++++........  ......+...++.+...+++.++  +++.|+-+...
T Consensus        17 KILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a~~   89 (363)
T d2c5aa1          17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAAD   89 (363)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHH--CCCEEEECCCC
T ss_conf             79997888789999999999782989999689852113423567279935155898998761--48767310233


No 23 
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=70.57  E-value=2.4  Score=19.65  Aligned_cols=30  Identities=33%  Similarity=0.450  Sum_probs=26.5

Q ss_pred             EEECCCCHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             997798038999999997899789999548
Q gi|254780768|r    6 IIAGSGMLPYYVAKAARLKNDEPVIASVLN   35 (281)
Q Consensus         6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~   35 (281)
                      +|.|.|.+-..+++.+...|++++++....
T Consensus         4 vI~G~G~~G~~la~~L~~~g~~v~vid~d~   33 (132)
T d1lssa_           4 IIAGIGRVGYTLAKSLSEKGHDIVLIDIDK   33 (132)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             EEECCCHHHHHHHHHHHHCCCCCCEECCCH
T ss_conf             998988999999999997799720021784


No 24 
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=70.46  E-value=2.8  Score=19.24  Aligned_cols=60  Identities=18%  Similarity=0.235  Sum_probs=38.4

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC----CC--CCCCEEEEEHHHHHHHHHHHHHCCCCE
Q ss_conf             99977980389999999978997899995486673----10--388567873899999999998649540
Q gi|254780768|r    5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF----DW--QDFECRELPLGDFCVLRSILHQYNIGR   68 (281)
Q Consensus         5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~----~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~   68 (281)
                      -||+|+|.+-..+++.+...|++++++....+...    ..  ..+.+.+-+..+    -..|++.++.+
T Consensus         6 iII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d----~~~L~~a~i~~   71 (153)
T d1id1a_           6 FIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND----SSVLKKAGIDR   71 (153)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS----HHHHHHHTTTT
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCC----HHHHHHHCCCC
T ss_conf             9998988899999999997699879995330558999998533996899906864----67797735402


No 25 
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=70.25  E-value=2.3  Score=19.83  Aligned_cols=33  Identities=24%  Similarity=0.223  Sum_probs=29.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             739999779803899999999789978999954
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVL   34 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~   34 (281)
                      =|+++|-|.|.+=..+|+.+.++|+++++....
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             979999488399999999999879989999799


No 26 
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=69.88  E-value=2.9  Score=19.18  Aligned_cols=31  Identities=16%  Similarity=0.198  Sum_probs=26.7

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             39999779803899999999789978999954
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVL   34 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~   34 (281)
                      |||+| |.|..=.-+|+.+.++|++++.....
T Consensus         2 kI~iI-G~G~mG~~lA~~l~~~g~~V~~~d~~   32 (165)
T d2f1ka2           2 KIGVV-GLGLIGASLAGDLRRRGHYLIGVSRQ   32 (165)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEEE-EECHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             99999-10498999999999789989999898


No 27 
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.41  E-value=3.4  Score=18.65  Aligned_cols=76  Identities=14%  Similarity=0.258  Sum_probs=53.3

Q ss_pred             CC-EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC------C---------CCCCCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             97-39999779803899999999789978999954866------7---------31038856787389999999999864
Q gi|254780768|r    1 MK-RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC------S---------FDWQDFECRELPLGDFCVLRSILHQY   64 (281)
Q Consensus         1 M~-kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~------~---------~~~~~~~~~~~~ig~ig~li~~Lk~~   64 (281)
                      |. ||-|..|+|-+=..+++.+.++|++++.+.-....      .         ....+..+...++.....+.+.++..
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf             99729997897389999999999786979999778742134432067888888733787179995644640122221233


Q ss_pred             CCCEEEEECCCC
Q ss_conf             954067702423
Q gi|254780768|r   65 NIGRIVVAGAID   76 (281)
Q Consensus        65 ~i~~ivmaG~V~   76 (281)
                      .+..++-+..+.
T Consensus        81 ~~~~i~h~Aa~~   92 (346)
T d1ek6a_          81 SFMAVIHFAGLK   92 (346)
T ss_dssp             CEEEEEECCSCC
T ss_pred             CCCCCCCCCCCC
T ss_conf             423320003136


No 28 
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=67.73  E-value=0.94  Score=22.43  Aligned_cols=29  Identities=17%  Similarity=0.280  Sum_probs=20.6

Q ss_pred             CCEEEEE-ECCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf             9739999-779803899999999789978999
Q gi|254780768|r    1 MKRLLII-AGSGMLPYYVAKAARLKNDEPVIA   31 (281)
Q Consensus         1 M~kigII-AG~G~LP~~ia~~~~~~g~~~~ii   31 (281)
                      |+ |||| -|.|++ ..+.++++..|..+..+
T Consensus         1 MK-I~IiDyg~gN~-~si~~al~~~g~~~~~~   30 (200)
T d1k9vf_           1 MR-IGIISVGPGNI-MNLYRGVKRASENFEDV   30 (200)
T ss_dssp             CE-EEEECSSSSCC-HHHHHHHHHHTTTSSSC
T ss_pred             CE-EEEEECCCCHH-HHHHHHHHHHCCCCCCC
T ss_conf             98-99990798689-99999999853004511


No 29 
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=66.39  E-value=2.4  Score=19.65  Aligned_cols=38  Identities=13%  Similarity=0.121  Sum_probs=29.5

Q ss_pred             EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
Q ss_conf             99779803899999999789978999954866731038
Q gi|254780768|r    6 IIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQD   43 (281)
Q Consensus         6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~   43 (281)
                      +|.|.|.+=..+++.+.+.|++++++....+......+
T Consensus         4 iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~   41 (134)
T d2hmva1           4 AVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS   41 (134)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT
T ss_pred             EEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
T ss_conf             99898899999999999879918994370888899997


No 30 
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=64.49  E-value=4.1  Score=18.15  Aligned_cols=72  Identities=14%  Similarity=0.125  Sum_probs=50.4

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECC-CCCCC--CCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             97399997798038999999997899789999548-66731--0388567873899999999998649540677024
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLN-ECSFD--WQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~-~~~~~--~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      |.|+-|..|+|.+=..+++.+.++|+++.++.+.- .....  .....+....+.....+.+.++  +|+.++-+..
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~   77 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTS   77 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCC--CCEEEEEEEE
T ss_conf             88899989865899999999997799379999727877887555782899853012332323212--1002589985


No 31 
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}
Probab=64.43  E-value=4.1  Score=18.14  Aligned_cols=75  Identities=20%  Similarity=0.131  Sum_probs=46.3

Q ss_pred             CEEEEEEC-CCCHHHHHHHHHHHCCCCEEEEEECCCC-C----------C--CCCCCCEEEEEHHHHHHHHHHHHHCCCC
Q ss_conf             73999977-9803899999999789978999954866-7----------3--1038856787389999999999864954
Q gi|254780768|r    2 KRLLIIAG-SGMLPYYVAKAARLKNDEPVIASVLNEC-S----------F--DWQDFECRELPLGDFCVLRSILHQYNIG   67 (281)
Q Consensus         2 ~kigIIAG-~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~----------~--~~~~~~~~~~~ig~ig~li~~Lk~~~i~   67 (281)
                      .|++||-| +|-+=..+++.+.++|++++.+.-.... +          .  ..+++.....++.+...+.+.++..+.+
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC
T ss_conf             98899968886899999999997869899997897555556688887403303897599982067979988887525987


Q ss_pred             EEEEECCCC
Q ss_conf             067702423
Q gi|254780768|r   68 RIVVAGAID   76 (281)
Q Consensus        68 ~ivmaG~V~   76 (281)
                      .|+-+-...
T Consensus        81 ~v~h~aa~~   89 (357)
T d1db3a_          81 EVYNLGAMS   89 (357)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEECCC
T ss_conf             899852035


No 32 
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=64.13  E-value=4.1  Score=18.11  Aligned_cols=75  Identities=9%  Similarity=0.020  Sum_probs=56.5

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             7399997798038999999997899789999548667310-------388567873899999999998649540677024
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW-------QDFECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-------~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      +|+=|..|+|-+=..+++.+.++|++++.+.........+       +.++....++.+...+.+.++...+..++-+..
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa   88 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   88 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHC
T ss_conf             98999788877999999999977998999978998617777664014687699840568576002343020244444421


Q ss_pred             CC
Q ss_conf             23
Q gi|254780768|r   75 ID   76 (281)
Q Consensus        75 V~   76 (281)
                      ..
T Consensus        89 ~~   90 (356)
T d1rkxa_          89 QP   90 (356)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             56


No 33 
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=63.16  E-value=4.1  Score=18.11  Aligned_cols=30  Identities=10%  Similarity=-0.009  Sum_probs=14.7

Q ss_pred             EEEEEECC---CCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             39999779---8038999999997899789999
Q gi|254780768|r    3 RLLIIAGS---GMLPYYVAKAARLKNDEPVIAS   32 (281)
Q Consensus         3 kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~   32 (281)
                      ++|+|.-+   +.+...+++.+...|++++.+.
T Consensus        21 sIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          21 KIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEC
T ss_conf             699991059999825999999997899799989


No 34 
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=61.35  E-value=4.6  Score=17.78  Aligned_cols=28  Identities=7%  Similarity=0.050  Sum_probs=20.7

Q ss_pred             EEHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             7389999999999864954067702423
Q gi|254780768|r   49 LPLGDFCVLRSILHQYNIGRIVVAGAID   76 (281)
Q Consensus        49 ~~ig~ig~li~~Lk~~~i~~ivmaG~V~   76 (281)
                      .+-....+.++.+|+.|+.-|=+-+..+
T Consensus        36 ~~~~~~~~~l~~~k~~G~N~iR~~~~~~   63 (339)
T d2vzsa5          36 WNETAAADKLKYVLNLGLNTVRLEGHIE   63 (339)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             9999999999999976998999558889


No 35 
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}
Probab=60.82  E-value=4.7  Score=17.72  Aligned_cols=31  Identities=10%  Similarity=0.068  Sum_probs=26.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             97399997798038999999997899789999
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIAS   32 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~   32 (281)
                      |.|||+|.=.|++.- ..++++..|.++.++.
T Consensus         1 m~~igv~~~~G~~~~-~~~al~~~G~~~~~i~   31 (195)
T d2nv0a1           1 MLTIGVLGLQGAVRE-HIHAIEACGAAGLVVK   31 (195)
T ss_dssp             CCEEEEECSSSCCHH-HHHHHHHTTCEEEEEC
T ss_pred             CCEEEEEECCCHHHH-HHHHHHHCCCCEEEEC
T ss_conf             929999962882999-9999998799199989


No 36 
>d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]}
Probab=59.12  E-value=5  Score=17.53  Aligned_cols=155  Identities=20%  Similarity=0.158  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHCCCEEECHHHCCHHHCCC----CCCCCCCCCCHHH--HHHHHHHHHHHHHHCCCCCEEEEEEECCEEE
Q ss_conf             589999999997697482112225242035----4334554653234--7889989999997332672259998197488
Q gi|254780768|r  108 AILKASIDLLESYGVSVVGAHEIVPELLVQ----VGSLGTCVPNRDV--KRDILAAMKSAEALSELDVGQSAVSIGGRVV  181 (281)
Q Consensus       108 ~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~----~G~l~~~~p~~~~--~~dI~~g~~i~~~l~~~DiGQsvVv~~g~Vi  181 (281)
                      .++..+.+.+++.|+++...+   ++++..    .|-+|.+-|+-..  ...+..++.++..+|    ++.+|+-.|+- 
T Consensus        68 ~~~~~~k~~l~~tGl~~~~~t---~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLG----a~~~v~W~G~~-  139 (392)
T d1xima_          68 GIIAGFKKALDETGLIVPMVT---TNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELG----AKTLVLWGGRE-  139 (392)
T ss_dssp             HHHHHHHHHHHHHTCBCCEEE---CCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT----CCEEEEECTTS-
T ss_pred             HHHHHHHHHHHHCCCEEEEEE---CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC----CCEEEECCCCC-
T ss_conf             999999999986398234663---3424471431588779399999999999999999999958----98379637877-


Q ss_pred             EEECCCCHH--HHHHHHHHHHHHCCCCC---CCCEEEEEECCCCCCCE-EEECCCCHHHHHHHHHCCC---EEEEEECCC
Q ss_conf             962534217--99999997543123456---67718999348887531-2106627999999998499---099997397
Q gi|254780768|r  182 ALEGIEGTD--SMLQRIVDCRNNGRILA---GKSGVLVKMCKSQQDMR-ADLPSIGAKTVQNVIKAGL---AGIALEAGK  252 (281)
Q Consensus       182 aiEa~eGTD--~mi~R~~~~~~~~~~~~---~~~~ilvK~~K~~QD~r-~DlP~IG~~Ti~~~~~ag~---~giaiea~~  252 (281)
                      +-|-...||  .+.+|..+..+.....+   +.+..+.==|||+.-+. .-+|++|. ++..+.+.+.   -|+.++.+.
T Consensus       140 G~~~~~~~d~~~~~~~~~e~l~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~-al~~i~~vg~p~~vgvnlD~gH  218 (392)
T d1xima_         140 GAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGH-AIAFVQELERPELFGINPETGH  218 (392)
T ss_dssp             EESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHH-HHHHHTTSSSGGGEEECCBHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHH-HHHHHHHCCCCCCEEEECCHHH
T ss_conf             667876558999999999999999998875088855986037788875434077999-9999997199003667411324


Q ss_pred             EEEE--CHHHHHHHHHHC-CCE
Q ss_conf             7998--589999999987-968
Q gi|254780768|r  253 SLVL--EKELVKKHADEA-GIF  271 (281)
Q Consensus       253 ~lil--d~~~~i~~a~~~-~i~  271 (281)
                      ..+.  +.+..++.|-.+ .|+
T Consensus       219 ~~~ag~~~~~~ia~a~~~gkL~  240 (392)
T d1xima_         219 EQMSNLNFTQGIAQALWHKKLF  240 (392)
T ss_dssp             HHTTTCCHHHHHHHHHHHTCBC
T ss_pred             HHHCCCCHHHHHHHHHHCCCEE
T ss_conf             5433798579999998659789


No 37 
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}
Probab=57.70  E-value=5.3  Score=17.37  Aligned_cols=74  Identities=16%  Similarity=0.262  Sum_probs=51.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC-CC------CC---CCCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             739999779803899999999789978999954866-73------10---388567873899999999998649540677
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC-SF------DW---QDFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~~------~~---~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      =|+=|..|+|-+=..+++.+.++|+++++ .+.... ..      .+   +++++...++.+...+.+.++..+++.|+-
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVV-NIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEE-EEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCEEE-EEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             97999888767999999999977997899-98479864427778765316884799865789899999997579999998


Q ss_pred             ECCCC
Q ss_conf             02423
Q gi|254780768|r   72 AGAID   76 (281)
Q Consensus        72 aG~V~   76 (281)
                      ++...
T Consensus        80 lAa~~   84 (361)
T d1kewa_          80 LAAES   84 (361)
T ss_dssp             CCSCC
T ss_pred             CCCCC
T ss_conf             96016


No 38 
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=57.62  E-value=2.1  Score=20.06  Aligned_cols=161  Identities=17%  Similarity=0.114  Sum_probs=82.9

Q ss_pred             CCEEEEEECCCCHH---HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCEE-EEEHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             97399997798038---999999997-899789999548667310388567-8738999999999986495406770242
Q gi|254780768|r    1 MKRLLIIAGSGMLP---YYVAKAARL-KNDEPVIASVLNECSFDWQDFECR-ELPLGDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus         1 M~kigIIAG~G~LP---~~ia~~~~~-~g~~~~ii~l~~~~~~~~~~~~~~-~~~ig~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      |+|++++.-.|-=.   ..+...++. .|.++.++...+............ ...+       +.+.....+-+++.|+.
T Consensus         1 M~kv~vll~~gf~~~E~~~~~~~l~~~~g~~v~~vs~~~~~V~s~~G~~v~~d~~l-------~~~~~~~~D~liipGG~   73 (188)
T d2fexa1           1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSY-------DALDPVDIDALVIPGGL   73 (188)
T ss_dssp             CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEG-------GGCCTTTCSEEEECCBS
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEECCCH-------HHCCHHHCCEEEECCCC
T ss_conf             97899996798529999999999754189689999579996784899989616765-------88893033589964776


Q ss_pred             CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             32100011102603578999999875104803589999999997697482112225242035433455465323478899
Q gi|254780768|r   76 DRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL  155 (281)
Q Consensus        76 ~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~  155 (281)
                      .  +.. .                     .+..++. +++.+.++|- .+.+----+-+|+..|++.+++-+.+.+..-.
T Consensus        74 ~--~~~-~---------------------~~~~l~~-~lr~~~~~~~-~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~  127 (188)
T d2fexa1          74 S--WEK-G---------------------TAADLGG-LVKRFRDRDR-LVAGICAAASALGGTGVLNDVAHTGNALASHK  127 (188)
T ss_dssp             H--HHH-T---------------------CCCCCHH-HHHHHHHTTC-EEEEETHHHHHHHHTTTTTTSCBCCSCHHHHH
T ss_pred             C--CCC-C---------------------CCHHHHH-HHHHHHHHCC-EEEEECCHHHHHHHCCCCCCCEEECCCHHHHH
T ss_conf             6--433-4---------------------4199999-9999997399-79974502678987476589477446127655


Q ss_pred             HHHHHHHHHC--CCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             8999999733--2672259998197488962534217999999975431
Q gi|254780768|r  156 AAMKSAEALS--ELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCRNN  202 (281)
Q Consensus       156 ~g~~i~~~l~--~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~~~  202 (281)
                      .    ...+.  ..=+-|..||.+|.++.-   .||.+ +.-+-.+.+.
T Consensus       128 ~----~~~~~~~~~~~~~~~vV~DgnliTs---~G~aa-~d~al~ii~~  168 (188)
T d2fexa1         128 A----YPAYRGEAHYRDQPRAVSDGGVVTA---AGSAP-VSFAVEILKS  168 (188)
T ss_dssp             T----STTCCCGGGBCCCSSCEEETTEEEE---CTTCH-HHHHHHHHHH
T ss_pred             H----HHHCCCCCEEEECCEEEECCCEEEC---CCCHH-HHHHHHHHHH
T ss_conf             4----5640787449847779977998999---97069-9999999998


No 39 
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}
Probab=57.58  E-value=4.3  Score=17.95  Aligned_cols=230  Identities=15%  Similarity=0.084  Sum_probs=111.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf             97399997798038999999997899789999548667310388567873899999999998649540677024232100
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPN   80 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~   80 (281)
                      |+ |-|..|+|-+=..+++.+..+|++++.+....   .+          +.....+-++++..+++.|+-+.... .+.
T Consensus         2 MK-IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---~D----------~~d~~~~~~~l~~~~~d~vih~a~~~-~~~   66 (281)
T d1vl0a_           2 MK-ILITGANGQLGREIQKQLKGKNVEVIPTDVQD---LD----------ITNVLAVNKFFNEKKPNVVINCAAHT-AVD   66 (281)
T ss_dssp             EE-EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---CC----------TTCHHHHHHHHHHHCCSEEEECCCCC-CHH
T ss_pred             CE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECHH---CC----------CCCHHHHHHHHHHCCCCEEEEECCCC-CCC
T ss_conf             87-99979998899999999986889899920412---56----------78999999999873997997402223-321


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC--EEECHHHCCHHHCC-CCCCCCCCCCCHHHHHHHHHH
Q ss_conf             011102603578999999875104803589999999997697--48211222524203-543345546532347889989
Q gi|254780768|r   81 VQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGV--SVVGAHEIVPELLV-QVGSLGTCVPNRDVKRDILAA  157 (281)
Q Consensus        81 ~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~--~vi~~~~~l~~ll~-~~G~l~~~~p~~~~~~dI~~g  157 (281)
                      .....++.     ..    ..    .-.....+.......+.  ...+...+..+-.. +........|...--..-..+
T Consensus        67 ~~~~~~~~-----~~----~~----n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~  133 (281)
T d1vl0a_          67 KCEEQYDL-----AY----KI----NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEG  133 (281)
T ss_dssp             HHHHCHHH-----HH----HH----HTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             CCCCCCHH-----HC----CC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             12346200-----00----32----3123222211000013222234442254114444553252000102344322489


Q ss_pred             HHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHH
Q ss_conf             99999733267225999819748896253421799999997543123456677189993488875312106627999999
Q gi|254780768|r  158 MKSAEALSELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADLPSIGAKTVQN  237 (281)
Q Consensus       158 ~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~~~~~~~~~~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~  237 (281)
                      ...+++.+.    +.++++-+.|.+-.. .....++.++..          +..+.+-   .+|-+-+..-.-=.+.+..
T Consensus       134 e~~~~~~~~----~~~i~R~~~vyG~~~-~~~~~~~~~~~~----------~~~~~~~---~~~~~~~i~v~D~~~~~~~  195 (281)
T d1vl0a_         134 ENFVKALNP----KYYIVRTAWLYGDGN-NFVKTMINLGKT----------HDELKVV---HDQVGTPTSTVDLARVVLK  195 (281)
T ss_dssp             HHHHHHHCS----SEEEEEECSEESSSS-CHHHHHHHHHHH----------CSEEEEE---SSCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHCC----CCCCCCEEEEECCCC-CCCCCHHHHHCC----------CCCEEEC---CCCEECCCHHHHHHHHHHH
T ss_conf             999998688----755543257857986-666220001104----------8742602---7743022022256666654


Q ss_pred             HHHCCCEEEEEECCCEEEECHHHHHHHHHHCCC--EEEEEC
Q ss_conf             998499099997397799858999999998796--899957
Q gi|254780768|r  238 VIKAGLAGIALEAGKSLVLEKELVKKHADEAGI--FVCGID  276 (281)
Q Consensus       238 ~~~ag~~giaiea~~~lild~~~~i~~a~~~~i--~i~g~~  276 (281)
                      +.+....|+.--++.-.+--.|-+...++..|.  .+.-+.
T Consensus       196 ~~~~~~~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~  236 (281)
T d1vl0a_         196 VIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCT  236 (281)
T ss_dssp             HHHHTCCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECC
T ss_conf             43312568616727996516789999999849985387614


No 40 
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=54.80  E-value=5.2  Score=17.40  Aligned_cols=67  Identities=10%  Similarity=0.009  Sum_probs=42.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC--CCEEEE------EHHHHHHHHHHHHHCCCC
Q ss_conf             9739999779803899999999789978999954866731038--856787------389999999999864954
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQD--FECREL------PLGDFCVLRSILHQYNIG   67 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~--~~~~~~------~ig~ig~li~~Lk~~~i~   67 (281)
                      |=|==|||-.|.-...+++.|+..|++++.+.-....+...-.  .+...+      +.-.+..++...++.+|+
T Consensus         1 m~kkvLIANRGEiA~Ri~ra~~elgi~tvav~s~~D~~s~~~~~ad~~~~ig~~~~~sYln~~~Ii~~A~~~~~d   75 (114)
T d1ulza2           1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTDPLDTYLNKQRIINLALEVGAD   75 (114)
T ss_dssp             CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSSTTHHHHCHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHCCEEEECCCCHHHHHHCHHHHHHHHHHHCCC
T ss_conf             974046756889999999999996297578735512117436545500465898355252679999999996997


No 41 
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}
Probab=53.21  E-value=6.2  Score=16.89  Aligned_cols=62  Identities=13%  Similarity=0.020  Sum_probs=43.9

Q ss_pred             CHHHHHHHHHHHCCCCEEEEEECCCC--CC-CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             03899999999789978999954866--73-10388567873899999999998649540677024
Q gi|254780768|r   12 MLPYYVAKAARLKNDEPVIASVLNEC--SF-DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus        12 ~LP~~ia~~~~~~g~~~~ii~l~~~~--~~-~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      ..-..+++.+..+|+.++....+|+.  +. ....+... .-..++...++.++.++++++.++|.
T Consensus        46 ~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~-~~~~dl~~vi~~l~~~~~~~i~lvG~  110 (302)
T d1thta_          46 DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT-TGKNSLCTVYHWLQTKGTQNIGLIAA  110 (302)
T ss_dssp             GGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHH-HHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             799999999997899899956789887888865678788-99989999997630357761689997


No 42 
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}
Probab=53.17  E-value=6.3  Score=16.89  Aligned_cols=30  Identities=23%  Similarity=0.371  Sum_probs=25.9

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             3999977980389999999978997899995
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      |||+| |.|++-..+++.+.++|+++++..-
T Consensus         2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r   31 (152)
T d2ahra2           2 KIGII-GVGKMASAIIKGLKQTPHELIISGS   31 (152)
T ss_dssp             EEEEE-CCSHHHHHHHHHHTTSSCEEEEECS
T ss_pred             EEEEE-ECCHHHHHHHHHHHHCCCEEEEECC
T ss_conf             89999-0439999999999858981899827


No 43 
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=52.93  E-value=2.4  Score=19.71  Aligned_cols=75  Identities=15%  Similarity=0.072  Sum_probs=47.6

Q ss_pred             CEEEEEECC---CCHHHHHHHHHHHCC-CCEEEEEECCCCC------CCCC------CCCEEEEEHHHHHHHHHHHHHCC
Q ss_conf             739999779---803899999999789-9789999548667------3103------88567873899999999998649
Q gi|254780768|r    2 KRLLIIAGS---GMLPYYVAKAARLKN-DEPVIASVLNECS------FDWQ------DFECRELPLGDFCVLRSILHQYN   65 (281)
Q Consensus         2 ~kigIIAG~---G~LP~~ia~~~~~~g-~~~~ii~l~~~~~------~~~~------~~~~~~~~ig~ig~li~~Lk~~~   65 (281)
                      +.+|+|..+   +.+-..+.++++..+ ++++.+.-.....      +.+.      |......+-...-.+++.+.+.+
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~~~~~~~~~~~~~~g   88 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKG   88 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHHHHCC
T ss_conf             85999834799987089999999974997089962676230884866535335778866788448677088899999739


Q ss_pred             CCEEE-EECCCC
Q ss_conf             54067-702423
Q gi|254780768|r   66 IGRIV-VAGAID   76 (281)
Q Consensus        66 i~~iv-maG~V~   76 (281)
                      ++.++ +.+.+.
T Consensus        89 ~~~~vi~s~Gf~  100 (129)
T d2csua1          89 VKGVVIITAGFG  100 (129)
T ss_dssp             CCEEEECCCSST
T ss_pred             CCEEEEECCCCC
T ss_conf             988987133546


No 44 
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Probab=52.82  E-value=6.3  Score=16.85  Aligned_cols=28  Identities=18%  Similarity=0.176  Sum_probs=24.5

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             9997798038999999997899789999
Q gi|254780768|r    5 LIIAGSGMLPYYVAKAARLKNDEPVIAS   32 (281)
Q Consensus         5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~   32 (281)
                      -||.|+|-==..+|..|.++|+++.++-
T Consensus         7 viIVGsG~aG~v~A~~La~~G~kVlvLE   34 (379)
T d2f5va1           7 VVIVGSGPIGCTYARELVGAGYKVAMFD   34 (379)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             8998968899999999965889399993


No 45 
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}
Probab=51.45  E-value=6.6  Score=16.71  Aligned_cols=82  Identities=5%  Similarity=0.053  Sum_probs=51.7

Q ss_pred             CEEEEEECCCC-HHHHHHHHHHHCCCCEEEEEECCCCCCC----C-C--CCCE--EEEE---HHHHHHHHHHHHHC--CC
Q ss_conf             73999977980-3899999999789978999954866731----0-3--8856--7873---89999999999864--95
Q gi|254780768|r    2 KRLLIIAGSGM-LPYYVAKAARLKNDEPVIASVLNECSFD----W-Q--DFEC--RELP---LGDFCVLRSILHQY--NI   66 (281)
Q Consensus         2 ~kigIIAG~G~-LP~~ia~~~~~~g~~~~ii~l~~~~~~~----~-~--~~~~--~~~~---ig~ig~li~~Lk~~--~i   66 (281)
                      +|.+||.|.+. +=..+++.+.+.|.+++++........+    + +  ..++  ...+   -.++.++++...++  .+
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   88 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             99799928888899999999998799899997987889999999999719946999844899999999999999982997


Q ss_pred             CEEEEECCCCCCCCHHH
Q ss_conf             40677024232100011
Q gi|254780768|r   67 GRIVVAGAIDRRPNVQD   83 (281)
Q Consensus        67 ~~ivmaG~V~krP~~~~   83 (281)
                      +-+|-.-.+..+-.+.+
T Consensus        89 DilVnnAg~~~~~~~~~  105 (260)
T d1h5qa_          89 SGLIANAGVSVVKPATE  105 (260)
T ss_dssp             EEEEECCCCCCCSCGGG
T ss_pred             CEECCCCCCCCCCCHHH
T ss_conf             67614433334677787


No 46 
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}
Probab=50.88  E-value=6.8  Score=16.65  Aligned_cols=148  Identities=12%  Similarity=0.076  Sum_probs=75.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CC-----CCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             97399997798038999999997899789999548667310-38-----8567873899999999998649540677024
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW-QD-----FECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-~~-----~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      | |||+| |-|..=.-+|+.+.++|+++++.....+....+ +.     .....-...+...++..+..... ..+++. 
T Consensus         2 M-kIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-   77 (178)
T d1pgja2           2 M-DVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRK-ALILVQ-   77 (178)
T ss_dssp             B-SEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCE-EEECCC-
T ss_pred             C-EEEEE-EEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE-EEEEEC-
T ss_conf             8-99999-1619899999999978995999979989999999828962002112455434678875256607-999605-


Q ss_pred             CCCCCCHHHHCCCHHHHHHHHHHHHHHHCC---------CCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCC
Q ss_conf             232100011102603578999999875104---------80358999999999769748211222524203543345546
Q gi|254780768|r   75 IDRRPNVQDLCFSIKDSLRISKMIWQLVSG---------GNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCV  145 (281)
Q Consensus        75 V~krP~~~~l~~D~~~~~~l~k~l~~~~~~---------gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~  145 (281)
                       . ......         .+.... .....         .+-..-+.+.+.+.+.|+..+++.-.-...-+..|. +- -
T Consensus        78 -~-~~~~~~---------~~~~~~-~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g~~~~a~~g~-~~-m  143 (178)
T d1pgja2          78 -A-GAATDS---------TIEQLK-KVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AF-F  143 (178)
T ss_dssp             -C-SHHHHH---------HHHHHH-HHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EE-E
T ss_pred             -C-CCHHHH---------HHHHHH-HHCCCCCEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCHHCCCC-EE-E
T ss_conf             -7-532332---------223035-43245615305675435689999999860360475024568831311885-78-8


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             5323478899899999973326
Q gi|254780768|r  146 PNRDVKRDILAAMKSAEALSEL  167 (281)
Q Consensus       146 p~~~~~~dI~~g~~i~~~l~~~  167 (281)
                      .. -+.++.++...+++.+++-
T Consensus       144 vg-G~~~~~~~v~pil~~~~~~  164 (178)
T d1pgja2         144 PG-GTLSVWEEIRPIVEAAAAK  164 (178)
T ss_dssp             EE-ECHHHHHHHHHHHHHHSCB
T ss_pred             EE-CCHHHHHHHHHHHHHHHCC
T ss_conf             50-8999999999999998454


No 47 
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=50.26  E-value=2.9  Score=19.13  Aligned_cols=31  Identities=10%  Similarity=0.125  Sum_probs=15.6

Q ss_pred             EEEEEECC---CCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             39999779---80389999999978997899995
Q gi|254780768|r    3 RLLIIAGS---GMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         3 kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      .+|+|.-+   +..-..+++.++..|++.+.+..
T Consensus        15 sIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          15 TIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             EEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             EEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf             6999964699997368999999638997148873


No 48 
>d2d1pb1 c.114.1.1 (B:1-119) tRNA 2-thiouridine synthesizing protein C, TusC {Escherichia coli [TaxId: 562]}
Probab=49.33  E-value=5.6  Score=17.19  Aligned_cols=75  Identities=15%  Similarity=0.087  Sum_probs=48.5

Q ss_pred             CCEEEEEECCCCH-------HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             9739999779803-------899999999789978999954866731038856787389999999999864954067702
Q gi|254780768|r    1 MKRLLIIAGSGML-------PYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG   73 (281)
Q Consensus         1 M~kigIIAG~G~L-------P~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG   73 (281)
                      |+|+.+|.-++-+       ...+|..+...|+++.++...+....-.++..........+.+.++.|...++.++.-++
T Consensus         1 Mkkv~ii~~~~P~~~~~~~~al~~Ala~a~~~~~V~iff~~dGV~~l~~~~~p~~~~~~~l~~~~~~l~~~~~~~i~vc~   80 (119)
T d2d1pb1           1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCA   80 (119)
T ss_dssp             CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGCTTCCGGGGTCCCCGGGGHHHHHTTCCCEEEEH
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEH
T ss_conf             96799997589998678999999999998479977999943389987237886434578889999999867996699728


Q ss_pred             CC
Q ss_conf             42
Q gi|254780768|r   74 AI   75 (281)
Q Consensus        74 ~V   75 (281)
                      .-
T Consensus        81 ~s   82 (119)
T d2d1pb1          81 AS   82 (119)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             75


No 49 
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=46.22  E-value=8  Score=16.18  Aligned_cols=35  Identities=20%  Similarity=0.166  Sum_probs=27.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             739999779803899999999789978999954866
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC   37 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~   37 (281)
                      +|+.| -|.|..=..+|+.+.++|++++++....+.
T Consensus         3 K~Ili-iGaG~~G~~~a~~L~~~g~~V~v~dr~~~~   37 (182)
T d1e5qa1           3 KSVLM-LGSGFVTRPTLDVLTDSGIKVTVACRTLES   37 (182)
T ss_dssp             CEEEE-ECCSTTHHHHHHHHHTTTCEEEEEESCHHH
T ss_pred             CEEEE-ECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             87999-878799999999998497979999897477


No 50 
>d1jx7a_ c.114.1.1 (A:) Hypothetical protein YchN {Escherichia coli [TaxId: 562]}
Probab=44.83  E-value=8.4  Score=16.04  Aligned_cols=72  Identities=13%  Similarity=0.108  Sum_probs=44.0

Q ss_pred             CCEEEEEECCCC-------HHHHHHHHHHHCCC--CEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             973999977980-------38999999997899--789999548667310388567873899999999998649540677
Q gi|254780768|r    1 MKRLLIIAGSGM-------LPYYVAKAARLKND--EPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         1 M~kigIIAG~G~-------LP~~ia~~~~~~g~--~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      |+|+.||.-+|-       -+..+|.++..+|+  ++.++...+....-.++....  ....+..+++.|..+|++ +..
T Consensus         1 M~k~~ii~~~~P~~~~~~~~al~~A~a~~~~~~~~eV~vff~~dgV~~~~~~~~~~--~~~~~~~~l~~l~~~gv~-v~v   77 (117)
T d1jx7a_           1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPG--EGYNIQQMLEILTAQNVP-VKL   77 (117)
T ss_dssp             CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCS--SSCCHHHHHHHHHHTTCC-EEE
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCC--CCCCHHHHHHHHHHCCCE-EEE
T ss_conf             96799998479988289999999999999638897379999662677751557864--435589999999977988-999


Q ss_pred             ECCC
Q ss_conf             0242
Q gi|254780768|r   72 AGAI   75 (281)
Q Consensus        72 aG~V   75 (281)
                      ++.=
T Consensus        78 C~~~   81 (117)
T d1jx7a_          78 CKTC   81 (117)
T ss_dssp             EHHH
T ss_pred             EHHH
T ss_conf             7788


No 51 
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=43.82  E-value=8.7  Score=15.94  Aligned_cols=28  Identities=29%  Similarity=0.299  Sum_probs=22.2

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf             39999779803899999999789978999
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIA   31 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii   31 (281)
                      |||+| |-|..=..+++.+.++|+++++.
T Consensus         2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~   29 (152)
T d1i36a2           2 RVGFI-GFGEVAQTLASRLRSRGVEVVTS   29 (152)
T ss_dssp             EEEEE-SCSHHHHHHHHHHHHTTCEEEEC
T ss_pred             EEEEE-CHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             89998-18999999999999879969997


No 52 
>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.16  E-value=8.9  Score=15.87  Aligned_cols=67  Identities=12%  Similarity=0.040  Sum_probs=41.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--CCCEEEE-------EHHHHHHHHHHHHHCCCC
Q ss_conf             973999977980389999999978997899995486673103--8856787-------389999999999864954
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQ--DFECREL-------PLGDFCVLRSILHQYNIG   67 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~--~~~~~~~-------~ig~ig~li~~Lk~~~i~   67 (281)
                      |=|==|||-.|.-..-+++.|+..|++.+.+.-....+...-  ..+...+       +.-++..+++.-++.+|+
T Consensus         1 m~~kvLIANRGeiA~Ri~ra~~elgi~tvavys~~D~~~~h~~~ade~v~lg~~~~~~sYl~~~~Ii~~A~~~~~d   76 (114)
T d2j9ga2           1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAV   76 (114)
T ss_dssp             CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCEEECCCCCHHHHHCCHHHHHHHHHHHCCC
T ss_conf             9740467568899999999999968952777412224434200477602538975243414889999999984786


No 53 
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}
Probab=42.01  E-value=9.2  Score=15.75  Aligned_cols=34  Identities=15%  Similarity=0.301  Sum_probs=28.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             7399997798038999999997899789999548
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLN   35 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~   35 (281)
                      +||-|..|.|-+=..+++++.++|+.++++.-..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~   36 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD   36 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf             8899985872899999999997849899965702


No 54 
>d2g0wa1 c.1.15.4 (A:10-284) Hypothetical protein Lmo2234 {Listeria monocytogenes [TaxId: 1639]}
Probab=41.91  E-value=9.2  Score=15.74  Aligned_cols=19  Identities=11%  Similarity=0.190  Sum_probs=15.6

Q ss_pred             HHHHHHHHHCCCEE--EEEEC
Q ss_conf             99999999849909--99973
Q gi|254780768|r  232 AKTVQNVIKAGLAG--IALEA  250 (281)
Q Consensus       232 ~~Ti~~~~~ag~~g--iaiea  250 (281)
                      +..++.+.+.|+.|  +.+|.
T Consensus       220 ~~i~~~L~~~gy~G~~~~iE~  240 (275)
T d2g0wa1         220 VGFAKILKEHGVNPRVMGVEV  240 (275)
T ss_dssp             HHHHHHHHHHTCCCSCEEECC
T ss_pred             HHHHHHHHHCCCCCCEEEEEE
T ss_conf             999999998099988799995


No 55 
>d2i1qa1 a.60.4.1 (A:5-64) DNA repair protein Rad51, N-terminal domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=40.86  E-value=6.2  Score=16.93  Aligned_cols=20  Identities=35%  Similarity=0.772  Sum_probs=14.5

Q ss_pred             EECCCCHHHHHHHHHCCCEE
Q ss_conf             10662799999999849909
Q gi|254780768|r  226 DLPSIGAKTVQNVIKAGLAG  245 (281)
Q Consensus       226 DlP~IG~~Ti~~~~~ag~~g  245 (281)
                      |+|-|||.|.+.+.++|+..
T Consensus         3 ~IpGIG~~~a~~L~~~G~~t   22 (60)
T d2i1qa1           3 DLPGVGPSTAEKLVEAGYID   22 (60)
T ss_dssp             TSTTCCHHHHHHHHHHTCCS
T ss_pred             CCCCCCHHHHHHHHHCCCCC
T ss_conf             88898999999999836999


No 56 
>d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=40.63  E-value=7.1  Score=16.50  Aligned_cols=43  Identities=9%  Similarity=0.031  Sum_probs=30.8

Q ss_pred             HHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECHH
Q ss_conf             9999999849909999739779985899999999879689995775
Q gi|254780768|r  233 KTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCGIDRE  278 (281)
Q Consensus       233 ~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g~~~~  278 (281)
                      +.++.+.+.+..|+++..|..   -.++++++|+++++-++..+.+
T Consensus        71 ~~i~~l~~~~~~~lIit~g~~---~p~~li~~a~~~~iPll~t~~~  113 (129)
T d1ko7a1          71 GRMRKLCRPETPAIIVTRDLE---PPEELIEAAKEHETPLITSKIA  113 (129)
T ss_dssp             THHHHHCCTTCCCEEECTTCC---CCHHHHHHHHHTTCCEEECCSC
T ss_pred             HHHHHHHCCCCCEEEEECCCC---CCHHHHHHHHHHCCEEEEECCC
T ss_conf             999998178986899979999---9899999999809849995785


No 57 
>d1vmka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima [TaxId: 2336]}
Probab=40.56  E-value=9.7  Score=15.61  Aligned_cols=27  Identities=11%  Similarity=0.044  Sum_probs=21.5

Q ss_pred             EEHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             738999999999986495406770242
Q gi|254780768|r   49 LPLGDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus        49 ~~ig~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      .++.++-.-+..|+.-||+.++....+
T Consensus        86 ~~~~~v~~~i~al~~lGv~~ii~tna~  112 (265)
T d1vmka_          86 HDPATVAFPVYLAKYVGVKGVVVTNAA  112 (265)
T ss_dssp             CCHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             888994259999987398769996143


No 58 
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=40.04  E-value=9.9  Score=15.55  Aligned_cols=26  Identities=8%  Similarity=-0.059  Sum_probs=12.8

Q ss_pred             EHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             38999999999986495406770242
Q gi|254780768|r   50 PLGDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus        50 ~ig~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      +-.++-+=+..+|+.||.-|=+.++.
T Consensus        35 ~~~~~~~di~l~k~~G~N~iR~~~~p   60 (292)
T d1jz8a5          35 DEQTMVQDILLMKQNNFNAVRCSHYP   60 (292)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECTTSC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             99999999999996699889965899


No 59 
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=39.78  E-value=9.2  Score=15.75  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=27.5

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             973999977980389999999978997899995
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      |+||+ |-|.|..=..+|..+-.+|+++.+...
T Consensus         7 m~KI~-ViGaG~wGtAlA~~La~~g~~V~l~~r   38 (189)
T d1n1ea2           7 LNKAV-VFGSGAFGTALAMVLSKKCREVCVWHM   38 (189)
T ss_dssp             EEEEE-EECCSHHHHHHHHHHHTTEEEEEEECS
T ss_pred             ECEEE-EECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             15699-999899999999999975996899992


No 60 
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=39.71  E-value=9.7  Score=15.59  Aligned_cols=76  Identities=13%  Similarity=0.176  Sum_probs=40.4

Q ss_pred             CC-EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             97-39999779803899999999789978999954866731038856787389999999999864954067702423210
Q gi|254780768|r    1 MK-RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRP   79 (281)
Q Consensus         1 M~-kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP   79 (281)
                      |+ =|||-.|-|.==-.+++.+.+.|+.++  .. +.....+.+...   +  -...+   .+..+-.-.-.-|.++ |.
T Consensus         2 mk~iIgitG~igSGKStv~~~l~~~G~~vi--da-D~i~~~l~~~~~---~--~~~~i---~~~fg~~i~~~~~~i~-r~   69 (208)
T d1vhta_           2 LRYIVALTGGIGSGKSTVANAFADLGINVI--DA-DIIARQVVEPGA---P--ALHAI---ADHFGANMIAADGTLQ-RR   69 (208)
T ss_dssp             CCEEEEEECCTTSCHHHHHHHHHHTTCEEE--EH-HHHHHHTTSTTC---T--HHHHH---HHHHCGGGBCTTSCBC-HH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHCCCCEE--EC-HHHHHHHHHCCC---H--HHHHH---HHHHHCCCCCCCCCCC-HH
T ss_conf             887999789886889999999998799199--74-399999984133---6--78999---9876000124786520-01


Q ss_pred             CHHHHCCCH
Q ss_conf             001110260
Q gi|254780768|r   80 NVQDLCFSI   88 (281)
Q Consensus        80 ~~~~l~~D~   88 (281)
                      .+..+.+.-
T Consensus        70 ~L~~~vf~~   78 (208)
T d1vhta_          70 ALRERIFAN   78 (208)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHHH
T ss_conf             246665213


No 61 
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=38.28  E-value=8.8  Score=15.89  Aligned_cols=29  Identities=17%  Similarity=-0.015  Sum_probs=21.9

Q ss_pred             CCE-EEEEECCCCHHHHHHHHHHHCCCCEE
Q ss_conf             973-99997798038999999997899789
Q gi|254780768|r    1 MKR-LLIIAGSGMLPYYVAKAARLKNDEPV   29 (281)
Q Consensus         1 M~k-igIIAG~G~LP~~ia~~~~~~g~~~~   29 (281)
                      |.- |||-.|.|+==-.+++.+.+.|++++
T Consensus         1 M~~iIgITG~igSGKStv~~~l~~~G~~vi   30 (205)
T d1jjva_           1 MTYIVGLTGGIGSGKTTIANLFTDLGVPLV   30 (205)
T ss_dssp             CCEEEEEECSTTSCHHHHHHHHHTTTCCEE
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHCCCEEE
T ss_conf             968999888887889999999998799399


No 62 
>d2hy5b1 c.114.1.1 (B:205-336) Intracellular sulfur oxidation protein DsrF {Chromatium vinosum [TaxId: 1049]}
Probab=38.22  E-value=5.3  Score=17.36  Aligned_cols=74  Identities=11%  Similarity=0.214  Sum_probs=48.1

Q ss_pred             CCEEEEEECCCCH-------HHHHHHHHHHCCCCEEEEEECCCCCCCCC-CCCEEEEEHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             9739999779803-------89999999978997899995486673103-885678738999999999986495406770
Q gi|254780768|r    1 MKRLLIIAGSGML-------PYYVAKAARLKNDEPVIASVLNECSFDWQ-DFECRELPLGDFCVLRSILHQYNIGRIVVA   72 (281)
Q Consensus         1 M~kigIIAG~G~L-------P~~ia~~~~~~g~~~~ii~l~~~~~~~~~-~~~~~~~~ig~ig~li~~Lk~~~i~~ivma   72 (281)
                      |+|+.+|--++-+       ...+|.++...+.++.++.. +....... +-.-.......+.++++.|...++.++.-+
T Consensus         1 Mkk~l~ii~~aPy~s~~a~~al~~A~aa~~~~~~v~vff~-~dGV~~l~~~q~p~~~~~~~l~~~l~~l~~~~v~~v~vc   79 (132)
T d2hy5b1           1 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFL-DDGVYQLTRGQDTKGIGMKNFSPTYRTLGDYEVRRIYVD   79 (132)
T ss_dssp             CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEEC-GGGGGGGBSCCCCGGGTCCCCGGGGGGGGGGTCCEEEEE
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE-CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf             9679999668999867999999999999707997799995-429888544689876688789999999986598537761


Q ss_pred             CCC
Q ss_conf             242
Q gi|254780768|r   73 GAI   75 (281)
Q Consensus        73 G~V   75 (281)
                      +.-
T Consensus        80 ~~s   82 (132)
T d2hy5b1          80 RDS   82 (132)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999


No 63 
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=37.92  E-value=11  Score=15.34  Aligned_cols=74  Identities=22%  Similarity=0.235  Sum_probs=50.6

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEE-E-----------C---CCCCC----------CCCCCCEEEEEHHHHHH
Q ss_conf             7399997798038999999997899789999-5-----------4---86673----------10388567873899999
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIAS-V-----------L---NECSF----------DWQDFECRELPLGDFCV   56 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~-l-----------~---~~~~~----------~~~~~~~~~~~ig~ig~   56 (281)
                      .||-|..|+|-+-..+++.+.++|++++++. +           .   .....          ..+++.+...++.+...
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHH
T ss_conf             98999899848999999999978598999946775422110121113433215778877776227970799830789999


Q ss_pred             HHHHHHHCCCCEEEEECCC
Q ss_conf             9999986495406770242
Q gi|254780768|r   57 LRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus        57 li~~Lk~~~i~~ivmaG~V   75 (281)
                      +-+.++..+++.|+-+...
T Consensus        82 l~~~~~~~~~d~ViHlAa~  100 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQ  100 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSC
T ss_pred             HHHHHHHHCCHHEECCCCC
T ss_conf             9999975110120012342


No 64 
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}
Probab=37.80  E-value=4.2  Score=18.08  Aligned_cols=60  Identities=15%  Similarity=0.056  Sum_probs=33.4

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCE
Q ss_conf             9997798038999999997899789999548667310388567873899999999998649540
Q gi|254780768|r    5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGR   68 (281)
Q Consensus         5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~   68 (281)
                      -||+|+|.+-..+++.++  +++++++................++. |+... -+.|++.++.+
T Consensus         3 ivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~-~~~L~~a~i~~   62 (129)
T d2fy8a1           3 VVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVH-GDPTR-VSDLEKANVRG   62 (129)
T ss_dssp             EEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEE-SCTTS-HHHHHHTTCTT
T ss_pred             EEEECCCHHHHHHHHHHC--CCCCEEEECCHHHHHHHHHCCCCCCC-CCCCC-HHHHHHHHHHC
T ss_conf             999898889999999975--79988998264888999862861125-65477-78897743513


No 65 
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=37.67  E-value=7.3  Score=16.44  Aligned_cols=49  Identities=14%  Similarity=0.192  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             3589999999997697482112225242035433455465323478899
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL  155 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~  155 (281)
                      +.|+.+..+.|.++|+.=++..++....=++.|.+...=|++++.-.-.
T Consensus         4 e~i~~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~iy~~F~sK~~L~~~~   52 (69)
T d2np5a1           4 ERLAAALFDVAAESGLEGASVREVAKRAGVSIGAVQHHFSTKDEMFAFA   52 (69)
T ss_dssp             HHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
T ss_conf             9999999999998491406799999883988879988883999999999


No 66 
>d1pzna1 a.60.4.1 (A:35-95) DNA repair protein Rad51, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=37.31  E-value=8.1  Score=16.14  Aligned_cols=20  Identities=35%  Similarity=0.660  Sum_probs=14.3

Q ss_pred             EECCCCHHHHHHHHHCCCEE
Q ss_conf             10662799999999849909
Q gi|254780768|r  226 DLPSIGAKTVQNVIKAGLAG  245 (281)
Q Consensus       226 DlP~IG~~Ti~~~~~ag~~g  245 (281)
                      ++|-|||.|.+.+.++++..
T Consensus         5 ~i~GIG~~~a~~L~~~g~~s   24 (61)
T d1pzna1           5 DLPGVGPATAEKLREAGYDT   24 (61)
T ss_dssp             CCTTCCHHHHHHHHTTTCCS
T ss_pred             CCCCCCHHHHHHHHHHCCCC
T ss_conf             17997999999999944999


No 67 
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}
Probab=37.29  E-value=11  Score=15.27  Aligned_cols=29  Identities=21%  Similarity=0.220  Sum_probs=23.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCC-CCEEEEE
Q ss_conf             39999779803899999999789-9789999
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKN-DEPVIAS   32 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g-~~~~ii~   32 (281)
                      |||+| |.|++-..+++.+.++| +++++..
T Consensus         2 kI~fI-G~G~MG~ai~~~l~~~~~~~i~v~~   31 (152)
T d1yqga2           2 NVYFL-GGGNMAAAVAGGLVKQGGYRIYIAN   31 (152)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             89999-6749999999999978997589994


No 68 
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}
Probab=36.01  E-value=11  Score=15.14  Aligned_cols=35  Identities=14%  Similarity=0.275  Sum_probs=29.3

Q ss_pred             CEEEEEECCCC---HHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             73999977980---389999999978997899995486
Q gi|254780768|r    2 KRLLIIAGSGM---LPYYVAKAARLKNDEPVIASVLNE   36 (281)
Q Consensus         2 ~kigIIAG~G~---LP~~ia~~~~~~g~~~~ii~l~~~   36 (281)
                      +|.+||-|.+.   +-..+|+.+.+.|.++++......
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~   42 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK   42 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             98799989998511899999999986999999958889


No 69 
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=34.26  E-value=12  Score=14.96  Aligned_cols=32  Identities=13%  Similarity=0.152  Sum_probs=28.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             97399997798038999999997899789999
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIAS   32 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~   32 (281)
                      |.||.||=-...+...+++.++..|.++.++.
T Consensus         1 m~ki~iiD~g~~~~~~i~r~l~~lg~~~~i~~   32 (196)
T d2a9va1           1 MLKIYVVDNGGQWTHREWRVLRELGVDTKIVP   32 (196)
T ss_dssp             CCBEEEEEESCCTTCHHHHHHHHTTCBCCEEE
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf             98899998987299999999997898699993


No 70 
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=34.20  E-value=12  Score=14.95  Aligned_cols=72  Identities=17%  Similarity=0.185  Sum_probs=36.6

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEEECCC-CCC-CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
Q ss_conf             99977980389999999978997899995486-673-1038856787389999999999864954067702423210001
Q gi|254780768|r    5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNE-CSF-DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQ   82 (281)
Q Consensus         5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~-~~~-~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~   82 (281)
                      .+|-|.|..-..+++.+...|..-+.+.=+.. ... ....+...+.++.++..   .++  ..+=|+.+-.-+ .|.+.
T Consensus        27 ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~---~l~--~~Divi~atss~-~~ii~  100 (159)
T d1gpja2          27 VLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD---HLA--RSDVVVSATAAP-HPVIH  100 (159)
T ss_dssp             EEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH---HHH--TCSEEEECCSSS-SCCBC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH---HHC--CCCEEEEECCCC-CCCCC
T ss_conf             999879889999999999669857999758688999988864114345145787---735--489999924898-76412


No 71 
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=34.12  E-value=12  Score=14.94  Aligned_cols=15  Identities=13%  Similarity=0.029  Sum_probs=8.9

Q ss_pred             HHHHHHHHCCCEEEC
Q ss_conf             999999976974821
Q gi|254780768|r  112 ASIDLLESYGVSVVG  126 (281)
Q Consensus       112 ~i~~~fe~~G~~vi~  126 (281)
                      .+..+|+..||+|+.
T Consensus        56 ~va~~l~~~G~eVi~   70 (168)
T d7reqa2          56 VIATAYADLGFDVDV   70 (168)
T ss_dssp             HHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHCCCCEEC
T ss_conf             999999867851420


No 72 
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=33.92  E-value=12  Score=14.92  Aligned_cols=130  Identities=12%  Similarity=0.022  Sum_probs=66.7

Q ss_pred             EEEEEECC--C---CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             39999779--8---038999999997899789999548667310388567873899999999998649540677024232
Q gi|254780768|r    3 RLLIIAGS--G---MLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDR   77 (281)
Q Consensus         3 kigIIAG~--G---~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~k   77 (281)
                      |+-||-++  |   .+...|++.+...|.++.++.+......                .+...+..  + +.++.|.=+-
T Consensus         4 K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~~~~~~----------------~~~~~~~~--~-d~ii~Gspt~   64 (149)
T d1ycga1           4 KAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVSDRN----------------DVIKEILD--A-RAVLVGSPTI   64 (149)
T ss_dssp             EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGSCHH----------------HHHHHHHH--C-SEEEEECCCB
T ss_pred             EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH----------------HHHHHHHH--C-CEEEEEEECC
T ss_conf             799999999808999999999998756982699971435568----------------77543641--7-8499996034


Q ss_pred             CCCHHHHCCCHHHHHHHHHHH---------HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCH
Q ss_conf             100011102603578999999---------87510480358999999999769748211222524203543345546532
Q gi|254780768|r   78 RPNVQDLCFSIKDSLRISKMI---------WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNR  148 (281)
Q Consensus        78 rP~~~~l~~D~~~~~~l~k~l---------~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~  148 (281)
                         .....+.++..+...+-.         +.. ..+.+..++.+.+.++..|++++..          +++.....|++
T Consensus        65 ---~g~~~~~~~~~l~~l~~~~~~~k~~~~fgs-~g~~g~a~~~l~~~l~~~g~~~v~~----------~~~~~~~~P~~  130 (149)
T d1ycga1          65 ---NNDILPVVSPLLDDLVGLRPKNKVGLAFGA-YGWGGGAQKILEERLKAAKIELIAE----------PGPTVQWVPRG  130 (149)
T ss_dssp             ---TTBCCGGGHHHHHHHHHHCCSSCEEEEEEE-ESSSCCHHHHHHHHHHHTTCEESCS----------SCCEEESSCCH
T ss_pred             ---CCCCCHHHHHHHHHHHCCCCCCCEEEEEEC-CCCCCHHHHHHHHHHHHCCCEEECC----------CEEEECCCCCH
T ss_conf             ---677798999999987504558987999951-3687136999999999879999615----------55899056898


Q ss_pred             HHHHH-HHHHHHHHHHHC
Q ss_conf             34788-998999999733
Q gi|254780768|r  149 DVKRD-ILAAMKSAEALS  165 (281)
Q Consensus       149 ~~~~d-I~~g~~i~~~l~  165 (281)
                      ++++. -++|.+++.++.
T Consensus       131 ~dl~~~~e~g~~ia~kl~  148 (149)
T d1ycga1         131 EDLQRCYELGRKIAARIA  148 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999862


No 73 
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=33.23  E-value=13  Score=14.85  Aligned_cols=20  Identities=20%  Similarity=0.245  Sum_probs=11.4

Q ss_pred             CHHHHHHHHHCCCEEEEEEC
Q ss_conf             79999999984990999973
Q gi|254780768|r  231 GAKTVQNVIKAGLAGIALEA  250 (281)
Q Consensus       231 G~~Ti~~~~~ag~~giaiea  250 (281)
                      .-.+...+.+.|+..|.+..
T Consensus       206 k~h~~~~a~~~gi~li~~GH  225 (265)
T d2fywa1         206 YYHTAQDMLSDGLLALDPGH  225 (265)
T ss_dssp             CHHHHHHHHHTTCEEEECCG
T ss_pred             CCHHHHHHHHCCCEEEECCC
T ss_conf             71789999866997997886


No 74 
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=33.11  E-value=11  Score=15.15  Aligned_cols=47  Identities=21%  Similarity=0.220  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             35899999999976974821122252420354334554653234788
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      +.|+.+..+.|.+.|+.=++..++....=.++|.+...-+++++...
T Consensus         7 ~~Il~aa~~l~~~~g~~~~si~~ia~~~gvs~~~~y~hF~~K~~L~~   53 (68)
T d2g7la1           7 RWIVDTAVALMRAEGLEKVTMRRLAQELDTGPASLYVYVANTAELHA   53 (68)
T ss_dssp             HHHHHHHHHHHHHHCSSSCCHHHHHHHTTSCHHHHTTTCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf             99999999999984903078999999978287676287759999999


No 75 
>d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]}
Probab=33.09  E-value=13  Score=14.83  Aligned_cols=26  Identities=8%  Similarity=-0.037  Sum_probs=17.3

Q ss_pred             EECCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             81974889625342179999999754
Q gi|254780768|r  175 SIGGRVVALEGIEGTDSMLQRIVDCR  200 (281)
Q Consensus       175 v~~g~ViaiEa~eGTD~mi~R~~~~~  200 (281)
                      .--|+|--.+...-.+++++|+.+.-
T Consensus       240 ~G~Grig~l~~p~~l~~~~~~vk~~l  265 (370)
T d2gx8a1         240 LGLGKIGYLQEEMTLGQFAEHVKQSL  265 (370)
T ss_dssp             EEEEEEEEEEEEEEHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHC
T ss_conf             57645999378603999999999871


No 76 
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=33.06  E-value=13  Score=14.83  Aligned_cols=24  Identities=8%  Similarity=0.079  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             999999999986495406770242
Q gi|254780768|r   52 GDFCVLRSILHQYNIGRIVVAGAI   75 (281)
Q Consensus        52 g~ig~li~~Lk~~~i~~ivmaG~V   75 (281)
                      ....+-+..+|+.|+.-|=+..+.
T Consensus        36 ~~~~~di~l~k~~G~N~iR~~h~p   59 (297)
T d1yq2a5          36 AGAREDLALMKRFNVNAIRTSHYP   59 (297)
T ss_dssp             HHHHHHHHHHHHTTCCEEEETTSC
T ss_pred             HHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             999999999997799889856899


No 77 
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.84  E-value=13  Score=14.81  Aligned_cols=49  Identities=20%  Similarity=0.143  Sum_probs=43.3

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      -+.|+.+..+.|.++|+.=++..++....=++.|-+...-|++++...-
T Consensus         9 r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~~Ke~L~~~   57 (76)
T d2fd5a1           9 RARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLE   57 (76)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGGGGGGTCSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHH
T ss_conf             9999999999999849130569999998389955004208999999999


No 78 
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}
Probab=32.69  E-value=13  Score=14.79  Aligned_cols=33  Identities=24%  Similarity=0.265  Sum_probs=29.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             973999977980389999999978997899995
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      .+||-|+.|+|.+=..+++++.++|++++++.-
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R   35 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVR   35 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             898999899868999999999978896999988


No 79 
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}
Probab=32.65  E-value=13  Score=14.79  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=28.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             973999977980389999999978997899995
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      ++||-|+.|.|.+=..+++.+.++|++++++.-
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R   35 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFR   35 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             899999899878999999999968797999989


No 80 
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=32.46  E-value=13  Score=14.76  Aligned_cols=59  Identities=12%  Similarity=0.115  Sum_probs=38.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             97399997798038999999997899789999548667310388567873899999999998649540677024
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      |++|+|+.-.|+.=....+-+++...++-++++....+.               .++.+..++.+.+.+++.-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~---------------~~L~~q~~ef~Pk~v~i~d~   60 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNV---------------KDLADAAKRTNAKRAVIADP   60 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH---------------HHHHHHHHHTTCSEEEESCG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCH---------------HHHHHHHHHHCCCCCEECCH
T ss_conf             958999887969999999999819777189999957978---------------99888887534443032118


No 81 
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=31.80  E-value=13  Score=14.69  Aligned_cols=50  Identities=18%  Similarity=0.147  Sum_probs=43.6

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             03589999999997697482112225242035433455465323478899
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL  155 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~  155 (281)
                      -+.|+.+....|.++|+.=++..++..+.=++.|.+...-|++++.....
T Consensus        11 r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~k~~L~~~~   60 (79)
T d2oi8a1          11 RAEIKDHAWEQIATAGASALSLNAIAKRMGMSGPALYRYFDGRDELITEL   60 (79)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCCHHHHHHHTTCCHHHHHTTCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
T ss_conf             99999999999998690306799999986799774455169999999999


No 82 
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}
Probab=31.29  E-value=13  Score=14.64  Aligned_cols=148  Identities=17%  Similarity=0.088  Sum_probs=77.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
Q ss_conf             399997798038999999997899789999548667310388-5678738999999999986495406770242321000
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDF-ECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNV   81 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~-~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~   81 (281)
                      |+|+| |-|..=.-+|+.+.++|+++++.....+....+... ....-+..      +..+.  ++-++.+  +...+..
T Consensus         2 kIgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~------e~~~~--~d~ii~~--v~~~~~v   70 (161)
T d1vpda2           2 KVGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAK------AIAEQ--CDVIITM--LPNSPHV   70 (161)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHH------HHHHH--CSEEEEC--CSSHHHH
T ss_pred             EEEEE-EHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH------HHHHC--CCEEEEE--CCCHHHH
T ss_conf             89999-436989999999998799699992884035789874000102399------99858--9958997--4997889


Q ss_pred             HHHCCCHHHHHHHHHHH-----HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             11102603578999999-----8751048035899999999976974821122252420354334554653234788998
Q gi|254780768|r   82 QDLCFSIKDSLRISKMI-----WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILA  156 (281)
Q Consensus        82 ~~l~~D~~~~~~l~k~l-----~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~  156 (281)
                      ....+....   +...+     .-.....+-...+.+.+.+++.|++.+++.-.-..--+..|.++----  -+..++++
T Consensus        71 ~~v~~~~~~---~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~~a~~g~l~~~~g--G~~~~~~~  145 (161)
T d1vpda2          71 KEVALGENG---IIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVG--GDKAIFDK  145 (161)
T ss_dssp             HHHHHSTTC---HHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEE--SCHHHHHH
T ss_pred             HHHHHCCCC---HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCEEEEEC--CCHHHHHH
T ss_conf             999827763---0101589989997887998999999999998599555553557865773588699980--89999999


Q ss_pred             HHHHHHHHCC
Q ss_conf             9999997332
Q gi|254780768|r  157 AMKSAEALSE  166 (281)
Q Consensus       157 g~~i~~~l~~  166 (281)
                      ...+++.+++
T Consensus       146 ~~~il~~~~~  155 (161)
T d1vpda2         146 YYDLMKAMAG  155 (161)
T ss_dssp             HHHHHHTTEE
T ss_pred             HHHHHHHHCC
T ss_conf             9999999668


No 83 
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=30.89  E-value=14  Score=14.59  Aligned_cols=73  Identities=19%  Similarity=0.263  Sum_probs=42.7

Q ss_pred             CEEEEEECC--CCH--HHHHHHHHHHCCCCEEEEEECCCCCCCC---CCCCEEEEE-------------------HHHHH
Q ss_conf             739999779--803--8999999997899789999548667310---388567873-------------------89999
Q gi|254780768|r    2 KRLLIIAGS--GML--PYYVAKAARLKNDEPVIASVLNECSFDW---QDFECRELP-------------------LGDFC   55 (281)
Q Consensus         2 ~kigIIAG~--G~L--P~~ia~~~~~~g~~~~ii~l~~~~~~~~---~~~~~~~~~-------------------ig~ig   55 (281)
                      +||-|.+|+  |+.  -..++++++++|+++.++.-.+..+.++   ..++...++                   ...+.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR   80 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             97999838858989999999999985899899999588324322350499579997888677777999999988777677


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998649540677024
Q gi|254780768|r   56 VLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus        56 ~li~~Lk~~~i~~ivmaG~   74 (281)
                      .....+++.....++..+.
T Consensus        81 ~~~~i~~~~~~~~~~~~~~   99 (351)
T d1f0ka_          81 QARAIMKAYKPDVVLGMGG   99 (351)
T ss_dssp             HHHHHHHHHCCSEEEECSS
T ss_pred             HHHHHHHCCCCCEEEECCC
T ss_conf             7788763134430011032


No 84 
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=29.98  E-value=14  Score=14.49  Aligned_cols=52  Identities=15%  Similarity=0.161  Sum_probs=44.2

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889989
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAA  157 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~g  157 (281)
                      -..|+.+....|.++|+.=++..+++...=++.|.+...-+++++.-..-.-
T Consensus         8 ~~~I~~aa~~l~~~~G~~~~sv~~Ia~~agvs~~t~Y~~F~~k~~l~~~~~~   59 (71)
T d2iu5a1           8 QKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFE   59 (71)
T ss_dssp             HHHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCGGGGGGTCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH
T ss_conf             9999999999999849640779999987571645897776799999999999


No 85 
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=29.53  E-value=13  Score=14.85  Aligned_cols=49  Identities=20%  Similarity=0.175  Sum_probs=42.8

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      -+.|+.+-.+.|.++|+.=++..++....=+++|-+...-|++++...-
T Consensus         5 ~e~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~slY~yF~~k~~L~~~   53 (72)
T d1zk8a1           5 LQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKN   53 (72)
T ss_dssp             HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHTTTCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             9999999999999869775669999999597999998988399999999


No 86 
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=29.53  E-value=14  Score=14.44  Aligned_cols=33  Identities=15%  Similarity=0.099  Sum_probs=27.8

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             3999977980389999999978997899995486
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNE   36 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~   36 (281)
                      ||+|| |.|..=..++..+.+.|+++.++.-...
T Consensus         2 kI~Ii-GaG~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVL-GCGALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             89999-9589999999999987994599970778


No 87 
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=29.49  E-value=14  Score=14.44  Aligned_cols=35  Identities=9%  Similarity=0.020  Sum_probs=25.4

Q ss_pred             CEEEEEECCCCHHH--------HHHHHHHHCCCCEEEEEECCC
Q ss_conf             73999977980389--------999999978997899995486
Q gi|254780768|r    2 KRLLIIAGSGMLPY--------YVAKAARLKNDEPVIASVLNE   36 (281)
Q Consensus         2 ~kigIIAG~G~LP~--------~ia~~~~~~g~~~~ii~l~~~   36 (281)
                      +|||+++|.-+-=+        .+.+++.+.+++++.+.....
T Consensus         3 ~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~   45 (96)
T d1iowa1           3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEV   45 (96)
T ss_dssp             CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_conf             4599995757622476886699999999875925764067521


No 88 
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=29.14  E-value=15  Score=14.40  Aligned_cols=96  Identities=14%  Similarity=0.170  Sum_probs=62.9

Q ss_pred             EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
Q ss_conf             997798038999999997899789999548667310388-5678738999999999986495406770242321000111
Q gi|254780768|r    6 IIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDF-ECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQDL   84 (281)
Q Consensus         6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~-~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~~l   84 (281)
                      ||-|+|-==..++.++.+......+....++........ .+..++..++..+.++.++++++ +|++|.=  -|.    
T Consensus         6 LvIGsGgREhAia~~L~~s~~~~~l~~~pgn~g~~~~~~~~~~~~~~~d~~~i~~~a~~~~id-lvviGPE--~pL----   78 (105)
T d1gsoa2           6 LVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKID-LTIVGPE--APL----   78 (105)
T ss_dssp             EEEECSHHHHHHHHHHTTCTTEEEEEEEECCHHHHHSTTEEECCCCTTCHHHHHHHHHHTTCS-EEEECSH--HHH----
T ss_pred             EEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCC-EEEECCH--HHH----
T ss_conf             998888799999999833887647999518776310223305554357689999899982968-8997708--888----


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHH
Q ss_conf             0260357899999987510480358999999999769748211222524
Q gi|254780768|r   85 CFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPE  133 (281)
Q Consensus        85 ~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~  133 (281)
                                               -..++++|+++|+.+++++.-...
T Consensus        79 -------------------------~~Gl~D~l~~~gI~vfGP~k~aA~  102 (105)
T d1gsoa2          79 -------------------------VKGVVDTFRAAGLKIFGPTAGAAQ  102 (105)
T ss_dssp             -------------------------HTTHHHHHHHTTCCEESCCTTTTH
T ss_pred             -------------------------HHHHHHHHHHCCCEEECCCHHHHH
T ss_conf             -------------------------769999999887979992879983


No 89 
>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}
Probab=28.90  E-value=6.9  Score=16.62  Aligned_cols=114  Identities=11%  Similarity=0.085  Sum_probs=63.1

Q ss_pred             HHHHHHHHCCCCEEEEEECCCCC-----CC----CCCCCEEEE--EHHHH--HHHHHHHHHCCCCEEEEECCCCCCCCHH
Q ss_conf             99999997899789999548667-----31----038856787--38999--9999999864954067702423210001
Q gi|254780768|r   16 YVAKAARLKNDEPVIASVLNECS-----FD----WQDFECREL--PLGDF--CVLRSILHQYNIGRIVVAGAIDRRPNVQ   82 (281)
Q Consensus        16 ~ia~~~~~~g~~~~ii~l~~~~~-----~~----~~~~~~~~~--~ig~i--g~li~~Lk~~~i~~ivmaG~V~krP~~~   82 (281)
                      .+++.++..|.+++.........     +.    +.+......  .++.+  ..+..+|+++|+++++++|-.+. -=. 
T Consensus        41 ~L~~~ar~~~~pvi~t~~~~~~~~~~~~~~~~~~~~~~~~v~~K~~~saf~~t~L~~~L~~~gi~~lil~G~~T~-~CV-  118 (204)
T d1yaca_          41 ALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTE-VCV-  118 (204)
T ss_dssp             HHHHHHHHTTCCEEEEEESTTTTTCCBCHHHHHHCTTSCEEEESSCSSGGGSHHHHHHHHHTTCSEEEEEEBSCC-CCC-
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECC-CHH-
T ss_conf             999999966998489996257877753211200168887477458466664336899998569977999974045-089-


Q ss_pred             HHCCCHHHHHHHHHH------HHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCC
Q ss_conf             110260357899999------987510480358999999999769748211222524203
Q gi|254780768|r   83 DLCFSIKDSLRISKM------IWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLV  136 (281)
Q Consensus        83 ~l~~D~~~~~~l~k~------l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~  136 (281)
                          . .+..-+...      +.-.....|...-.+-.+.+...|..++...+++-||+-
T Consensus       119 ----~-~Ta~dA~~~Gy~V~vv~Da~as~~~~~he~Al~~m~~~g~~i~t~e~v~~el~r  173 (204)
T d1yaca_         119 ----A-FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHR  173 (204)
T ss_dssp             ----H-HHHHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEECHHHHHHHHHC
T ss_pred             ----H-HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH
T ss_conf             ----8-889999986997999572628787589999999999879999639999999985


No 90 
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=28.88  E-value=15  Score=14.37  Aligned_cols=27  Identities=19%  Similarity=0.276  Sum_probs=14.2

Q ss_pred             EECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             977980389999999978997899995
Q gi|254780768|r    7 IAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         7 IAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      |.|+|-.-.++|..+...|.++.++..
T Consensus        35 ViGgG~iG~E~A~~l~~~g~~Vtlie~   61 (123)
T d1nhpa2          35 VIGSGYIGIEAAEAFAKAGKKVTVIDI   61 (123)
T ss_dssp             EECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EECCHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             999718799999986104537999974


No 91 
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}
Probab=28.38  E-value=15  Score=14.31  Aligned_cols=72  Identities=11%  Similarity=0.085  Sum_probs=46.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-------CCC--CCCEEEEEHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             973999977980389999999978997899995486673-------103--88567873899999999998649540677
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF-------DWQ--DFECRELPLGDFCVLRSILHQYNIGRIVV   71 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-------~~~--~~~~~~~~ig~ig~li~~Lk~~~i~~ivm   71 (281)
                      |+||-|..|+|-+=..+++.+.++|+++.++.+...+..       .+.  +......++.+...+...++.  +..++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~--~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK--ADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT--CSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH--HHHHHH
T ss_conf             399999188868999999999977997499998488742348788886258808997627898999987752--003544


Q ss_pred             ECC
Q ss_conf             024
Q gi|254780768|r   72 AGA   74 (281)
Q Consensus        72 aG~   74 (281)
                      ...
T Consensus        80 ~a~   82 (346)
T d1oc2a_          80 YAA   82 (346)
T ss_dssp             CCS
T ss_pred             HHH
T ss_conf             432


No 92 
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=27.88  E-value=15  Score=14.26  Aligned_cols=17  Identities=6%  Similarity=0.012  Sum_probs=9.3

Q ss_pred             HHHHHHHHHHHCCCCEE
Q ss_conf             99999999986495406
Q gi|254780768|r   53 DFCVLRSILHQYNIGRI   69 (281)
Q Consensus        53 ~ig~li~~Lk~~~i~~i   69 (281)
                      ++.+.++.+++.|++-|
T Consensus        40 ~~~~~l~~~k~~G~N~v   56 (370)
T d1rh9a1          40 KVTNTFQQASKYKMNVA   56 (370)
T ss_dssp             HHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHHCCCEEE
T ss_conf             99999999998799199


No 93 
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.54  E-value=13  Score=14.72  Aligned_cols=48  Identities=21%  Similarity=0.199  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             358999999999769748211222524203543345546532347889
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      +.|+.+-.+.|.++|+.=++..++....=+++|-+...=|++++.-.-
T Consensus         3 ~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~sK~~L~~~   50 (70)
T d2gena1           3 DEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGE   50 (70)
T ss_dssp             HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCHHHHHHHTCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             999999999999859240879999998795877999898799999999


No 94 
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}
Probab=27.40  E-value=16  Score=14.20  Aligned_cols=32  Identities=9%  Similarity=0.075  Sum_probs=28.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             73999977980389999999978997899995
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      ++|.++.|+|.+=..+++.+.++|++++++.-
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R   35 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVH   35 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             99999898728999999999968896999977


No 95 
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]}
Probab=27.11  E-value=16  Score=14.17  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=32.9

Q ss_pred             HHHHHHHHHCCCE--EEEEE----CCCEEEECHHHHHHHHHHCCCEEEEECH
Q ss_conf             9999999984990--99997----3977998589999999987968999577
Q gi|254780768|r  232 AKTVQNVIKAGLA--GIALE----AGKSLVLEKELVKKHADEAGIFVCGIDR  277 (281)
Q Consensus       232 ~~Ti~~~~~ag~~--giaie----a~~~lild~~~~i~~a~~~~i~i~g~~~  277 (281)
                      .-++.++.-||+.  ++..|    .+++ .+..++..++|++|+|.++.++.
T Consensus       145 EasvdL~~lAGl~P~avi~Eil~d~dG~-~~~~~~~~~fA~~~~l~~isi~d  195 (202)
T d1tksa_         145 EAAVQLSTLAGLQPAGVICELVRDEDGL-MMRLDDCIQFGKKHGIKIININQ  195 (202)
T ss_dssp             HHHHHHHHHTTSCSBEEEEEBBCTTTCC-BCBHHHHHHHHHHHTCCEEEHHH
T ss_pred             HHHHHHHHHCCCCCCEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEHHH
T ss_conf             9999999836998618999998879987-34899999999985997998999


No 96 
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}
Probab=26.97  E-value=16  Score=14.15  Aligned_cols=74  Identities=15%  Similarity=0.150  Sum_probs=53.4

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEE-ECCCCCC-------CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             399997798038999999997899789999-5486673-------10388567873899999999998649540677024
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIAS-VLNECSF-------DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA   74 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~-l~~~~~~-------~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~   74 (281)
                      ||=|..|.|-+=..+.+.+.++|++++++. +......       ...++++...++.....+-+.++..+.+.|+-+..
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECC
T ss_conf             79998987289999999999783989999798866516678875116981899861689899999997357746996034


Q ss_pred             CC
Q ss_conf             23
Q gi|254780768|r   75 ID   76 (281)
Q Consensus        75 V~   76 (281)
                      ..
T Consensus        82 ~~   83 (338)
T d1orra_          82 QV   83 (338)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             32


No 97 
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=26.60  E-value=7.1  Score=16.50  Aligned_cols=47  Identities=28%  Similarity=0.299  Sum_probs=42.1

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             03589999999997697482112225242035433455465323478
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR  152 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~  152 (281)
                      -..|+.+..+.|.++|+.=++..+++...=++.|.+...-|++++.-
T Consensus         6 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~   52 (69)
T d2fq4a1           6 QKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVV   52 (69)
T ss_dssp             HHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHH
T ss_conf             99999999999998392407799999997858879999987999999


No 98 
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=26.36  E-value=16  Score=14.08  Aligned_cols=49  Identities=20%  Similarity=0.195  Sum_probs=42.8

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      -+.||.+-...|.++|+.=++..++....=++.|-+...-|++.+.-.-
T Consensus         7 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~~~   55 (75)
T d3c07a1           7 RALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNAYYYFAGKEHLIQG   55 (75)
T ss_dssp             HHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHHHHHHCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             9999999999999749140779999998793987999898599999999


No 99 
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.36  E-value=16  Score=14.08  Aligned_cols=31  Identities=23%  Similarity=0.251  Sum_probs=26.2

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             39999779803899999999789978999954
Q gi|254780768|r    3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVL   34 (281)
Q Consensus         3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~   34 (281)
                      ||++| |.|.+=.-.|-.+..+|++++.+...
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             89998-98884999999999589938999698


No 100
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=25.60  E-value=16  Score=14.21  Aligned_cols=47  Identities=13%  Similarity=0.067  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             358999999999769748211222524203543345546532347889
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      +.||.+-.+.|.+.|+. .+..++....=++.|.+...=+++++.-.-
T Consensus         4 ~~Il~aA~~l~~~~G~~-~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~   50 (70)
T d2hkua1           4 DALFTAATELFLEHGEG-VPITQICAAAGAHPNQVTYYYGSKERLFVE   50 (70)
T ss_dssp             HHHHHHHHHHHHHHCTT-SCHHHHHHHHTCCHHHHHHHHSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCHHHHHHCCCCHHHHHHH
T ss_conf             99999999998761357-449999988788853687308999999999


No 101
>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase  alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.56  E-value=17  Score=13.98  Aligned_cols=114  Identities=13%  Similarity=0.038  Sum_probs=68.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCE-EEEEECCCCCCCCCC-------C---CEEE---EEHHHHHHHHHHHHHCCCC
Q ss_conf             739999779803899999999789978-999954866731038-------8---5678---7389999999999864954
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEP-VIASVLNECSFDWQD-------F---ECRE---LPLGDFCVLRSILHQYNIG   67 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~-~ii~l~~~~~~~~~~-------~---~~~~---~~ig~ig~li~~Lk~~~i~   67 (281)
                      .++|||+-+|.+-..++..+..+|..+ +++.+-++++....+       .   ...-   -.+++..+.++..++..-+
T Consensus        21 G~valiSqSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~~~~d~l~~l~~D~~t~~i~l~~E~~~~~~~f~~~~r~~~~~  100 (161)
T d2csua2          21 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKK  100 (161)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCCSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf             99999978789999999999857997259994598501689999999734799857899722785999999999887525


Q ss_pred             EEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHH
Q ss_conf             06770242321000111026035789999998751048035899999999976974821122
Q gi|254780768|r   68 RIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHE  129 (281)
Q Consensus        68 ~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~  129 (281)
                      +-+.+-+.-+.+.-.         ..+. ---.. .-|++....   ..|++.|+.+...-+
T Consensus       101 Kpvv~~k~G~s~~g~---------~aa~-sHtga-~ag~~~~~~---a~~~~aGvi~v~~~~  148 (161)
T d2csua2         101 KPIIALKAGKSESGA---------RAAS-SHTGS-LAGSWKIYE---AAFKQSGVLVANTID  148 (161)
T ss_dssp             SCEEEEECC-----------------------------CHHHHH---HHHHHTTCEEESSHH
T ss_pred             CCEEEEEEECCCCCC---------CCCC-CCCCC-CCCCHHHHH---HHHHHCCCEEECCHH
T ss_conf             870588740341001---------2223-43354-356199999---999977956929999


No 102
>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.24  E-value=9  Score=15.81  Aligned_cols=20  Identities=20%  Similarity=0.336  Sum_probs=11.6

Q ss_pred             EECCCCHHHHHHHHHCCCEE
Q ss_conf             10662799999999849909
Q gi|254780768|r  226 DLPSIGAKTVQNVIKAGLAG  245 (281)
Q Consensus       226 DlP~IG~~Ti~~~~~ag~~g  245 (281)
                      +.|-||+.|++.+.+||+..
T Consensus         7 ~~~Gig~~~~~kL~~aG~~T   26 (64)
T d1szpa1           7 QVNGITMADVKKLRESGLHT   26 (64)
T ss_dssp             CCTTCCHHHHHHHHTTSCCS
T ss_pred             HHCCCCHHHHHHHHHCCCCC
T ss_conf             57799999999999969974


No 103
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.19  E-value=17  Score=13.94  Aligned_cols=70  Identities=14%  Similarity=0.196  Sum_probs=40.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             73999977980389999999978997899995486673103885678738999999999986495406770-242
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVA-GAI   75 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivma-G~V   75 (281)
                      +|+-|..|+|-+=..+++.+.++|+.+.++.+.-......+.+.   ....++..+.+.+ ...++.++.+ |..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~---~~~~d~~~~~~~~-~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLD---NPVGPLAELLPQL-DGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEE---CCBSCHHHHGGGC-CSCCSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCC---CCCCCHHHHHHCC-CCCHHEEEEEEEEE
T ss_conf             98999889848999999999968895799997178133204323---4432101222203-43400145443110


No 104
>d1vkma_ c.138.1.1 (A:) Hypothetical protein TM1464 {Thermotoga maritima [TaxId: 2336]}
Probab=25.02  E-value=17  Score=13.92  Aligned_cols=148  Identities=14%  Similarity=0.234  Sum_probs=74.5

Q ss_pred             HHHHHHHHCCCCEEEEEECCCC------CCCCC---CCCEEEEEHHHHH--------------HHHHHHHHCCCCEEEE-
Q ss_conf             9999999789978999954866------73103---8856787389999--------------9999998649540677-
Q gi|254780768|r   16 YVAKAARLKNDEPVIASVLNEC------SFDWQ---DFECRELPLGDFC--------------VLRSILHQYNIGRIVV-   71 (281)
Q Consensus        16 ~ia~~~~~~g~~~~ii~l~~~~------~~~~~---~~~~~~~~ig~ig--------------~li~~Lk~~~i~~ivm-   71 (281)
                      .+-+..+.+|--|-.+++.+..      +.+++   +....-++-.+++              ..+..-+..||+=.+= 
T Consensus        44 ~~e~~vr~~Ga~PAtiai~~G~~~vGl~~~ele~la~~~~~K~s~rdl~~~~a~~~~gaTTVsaTm~iA~~aGI~VFaTG  123 (292)
T d1vkma_          44 RAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREGADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTG  123 (292)
T ss_dssp             HHHHHHHHHTCEEEEEEEETTEEEESCCHHHHHHHHHHCCEEECGGGHHHHHHHTCCEEECHHHHHHHHHHHTCCEEECS
T ss_pred             HHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEC
T ss_conf             99999997798632488888864416899999998624330024225899973265663119999999985797089864


Q ss_pred             -ECCCCCCCCHHHHCCCHHHHHHHHHHHHHH----HCCCCHHH--HHHHHHHHHHCCCEEECHH-HCCHHHCCCCCCCCC
Q ss_conf             -024232100011102603578999999875----10480358--9999999997697482112-225242035433455
Q gi|254780768|r   72 -AGAIDRRPNVQDLCFSIKDSLRISKMIWQL----VSGGNAAI--LKASIDLLESYGVSVVGAH-EIVPELLVQVGSLGT  143 (281)
Q Consensus        72 -aG~V~krP~~~~l~~D~~~~~~l~k~l~~~----~~~gDd~i--L~~i~~~fe~~G~~vi~~~-~~l~~ll~~~G~l~~  143 (281)
                       +|+|. |-     -+|...|+..   |.+.    .--|--+|  +..-.+++|..|+.|++.+ +.+|.++....-+.-
T Consensus       124 GIGGVH-r~-----s~DiSaDL~e---L~~tpv~vVcaG~KsiLDi~~TlE~LET~gV~Vvgy~t~~fPaF~~~~Sg~~~  194 (292)
T d1vkma_         124 GTGGVH-PG-----RVDVSQDLTE---MSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRV  194 (292)
T ss_dssp             CBCCBC-TT-----SSCBCHHHHH---HTTCCEEEEESBBCTTSCHHHHHHHHHHTTCCEEEESCSBCCBTTBSCCSCBC
T ss_pred             CCCCCC-CC-----CCCCCCCHHH---HHCCCEEEEECCCHHHCCCHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCC
T ss_conf             734655-78-----8655533766---72387589922617650547789998746716996068865401016789877


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf             4653234788998999999733267225999819
Q gi|254780768|r  144 CVPNRDVKRDILAAMKSAEALSELDVGQSAVSIG  177 (281)
Q Consensus       144 ~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~  177 (281)
                        |.   ..+.+-..++.+....+....+++|.|
T Consensus       195 --~~---v~~~~eiA~i~~~~~~lgl~~giLvan  223 (292)
T d1vkma_         195 --PR---IENVEEVLKIYESMKEMELEKTLMVLN  223 (292)
T ss_dssp             --CE---ECSHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             --CC---CCCHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             --77---499999999999999718986289978


No 105
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=24.91  E-value=17  Score=13.90  Aligned_cols=111  Identities=12%  Similarity=0.133  Sum_probs=61.9

Q ss_pred             CCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-----------C----CCCCCEEEEE-----------HHHHHHHHHHHH
Q ss_conf             7980389999999978997899995486673-----------1----0388567873-----------899999999998
Q gi|254780768|r    9 GSGMLPYYVAKAARLKNDEPVIASVLNECSF-----------D----WQDFECRELP-----------LGDFCVLRSILH   62 (281)
Q Consensus         9 G~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-----------~----~~~~~~~~~~-----------ig~ig~li~~Lk   62 (281)
                      |.-+|-..++.++..+++.++.+........           .    +.......+.           -..+-.+++.+.
T Consensus        48 GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~  127 (213)
T d1l8qa2          48 GKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLY  127 (213)
T ss_dssp             SHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             39999999998744676504884437879999999871662667898762130101126550586577889999999876


Q ss_pred             HCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf             64954067702423210001110260357899999-987510480358999999999769748
Q gi|254780768|r   63 QYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKM-IWQLVSGGNAAILKASIDLLESYGVSV  124 (281)
Q Consensus        63 ~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~-l~~~~~~gDd~iL~~i~~~fe~~G~~v  124 (281)
                      .++. .+++++.-. ...+....+|+++  |+... ...+ .-.|+..++.+...+++.|+.+
T Consensus       128 ~~~~-~iiits~~~-p~~l~~~~~dL~S--RL~~g~~~~i-~p~d~~~~~iL~~~a~~rgl~l  185 (213)
T d1l8qa2         128 LLEK-QIILASDRH-PQKLDGVSDRLVS--RFEGGILVEI-ELDNKTRFKIIKEKLKEFNLEL  185 (213)
T ss_dssp             HTTC-EEEEEESSC-GGGCTTSCHHHHH--HHHTSEEEEC-CCCHHHHHHHHHHHHHHTTCCC
T ss_pred             HCCC-EEEEECCCC-CHHCCCCCHHHHH--HHHCCEEEEE-CCCCHHHHHHHHHHHHHCCCCC
T ss_conf             3166-389954875-1001343267888--8618568997-8882799999999999829999


No 106
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}
Probab=24.83  E-value=17  Score=13.89  Aligned_cols=166  Identities=9%  Similarity=0.004  Sum_probs=86.7

Q ss_pred             CEEEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCC--CEEEEE---HHHHHHHHHHHHHC--CCCEEEEE
Q ss_conf             739999779-8038999999997899789999548667310-388--567873---89999999999864--95406770
Q gi|254780768|r    2 KRLLIIAGS-GMLPYYVAKAARLKNDEPVIASVLNECSFDW-QDF--ECRELP---LGDFCVLRSILHQY--NIGRIVVA   72 (281)
Q Consensus         2 ~kigIIAG~-G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-~~~--~~~~~~---ig~ig~li~~Lk~~--~i~~ivma   72 (281)
                      +|.+||-|. +-+=..+++.+...|.+++++....+.-... +..  .....+   ..++.++++...++  .++-+|-.
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn   84 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY   84 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             98999938888899999999998799999997987899999997298499995699999999999999855996099988


Q ss_pred             CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             24232100011102603578999999875104803589999999997697482112225242035433455465323478
Q gi|254780768|r   73 GAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR  152 (281)
Q Consensus        73 G~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~  152 (281)
                      -.+.....+.+...+  .   ..+.+ ...-.+--.+.+.+...+.+++-..+-...-. .....++... ...+|... 
T Consensus        85 AG~~~~~~~~~~~~~--~---~~~~~-~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~-Y~asKaal-  155 (242)
T d1ulsa_          85 AGITRDNFHWKMPLE--D---WELVL-RVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQAN-YAASMAGV-  155 (242)
T ss_dssp             CCCCCCCCGGGCCHH--H---HHHHH-HHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHH-HHHHHHHH-
T ss_pred             CCCCCCCCHHHCCCH--H---HHCCC-CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC-CCCCCCCCCC-HHHHHHHH-
T ss_conf             744456853207601--1---10011-22200445443202332333332100012131-0137778751-59899999-


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf             8998999999733267225999819
Q gi|254780768|r  153 DILAAMKSAEALSELDVGQSAVSIG  177 (281)
Q Consensus       153 dI~~g~~i~~~l~~~DiGQsvVv~~  177 (281)
                       ..+-..++.++++..|-=-+|.-+
T Consensus       156 -~~ltk~lA~ela~~gIrVN~I~PG  179 (242)
T d1ulsa_         156 -VGLTRTLALELGRWGIRVNTLAPG  179 (242)
T ss_dssp             -HHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -HHHHHHHHHHHHHHCCEEEEEEEC
T ss_conf             -999999999974659389998417


No 107
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=24.65  E-value=16  Score=14.13  Aligned_cols=48  Identities=21%  Similarity=0.211  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             358999999999769748211222524203543345546532347889
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      ..|+.+-.+.|.++|+.=++..++....=++.|.+...-|++++.-.-
T Consensus         7 ~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~y~~F~~K~~l~~~   54 (72)
T d1pb6a1           7 KAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIA   54 (72)
T ss_dssp             HHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHHHHHHSSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             999999999999859250679999998697867999888699999999


No 108
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=24.62  E-value=18  Score=13.87  Aligned_cols=49  Identities=16%  Similarity=0.177  Sum_probs=42.9

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      -..||.+-...|.+.|+.=++..++....=++.|-+...-|++++.-.-
T Consensus        13 r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~~K~~L~~~   61 (81)
T d1rkta1          13 QAEILEAAKTVFKRKGFELTTMKDVVEESGFSRGGVYLYFSSTEEMFRR   61 (81)
T ss_dssp             HHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             9999999999999859251779999998694988998888499999999


No 109
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=24.42  E-value=18  Score=13.84  Aligned_cols=66  Identities=12%  Similarity=0.056  Sum_probs=37.3

Q ss_pred             CCEEEEEECCCC-H---HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             973999977980-3---899999999789978999954866731038856787389999999999864954067702
Q gi|254780768|r    1 MKRLLIIAGSGM-L---PYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG   73 (281)
Q Consensus         1 M~kigIIAG~G~-L---P~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG   73 (281)
                      |+||||=-=-+. .   -....+.+.+.|.+.++.++-.- ..+..++      ...+..+++..++.+.+-++=+.
T Consensus         2 ~~~LGiSvY~~~~~~e~~~~yi~~a~~~Gf~~iFTSL~~~-e~~~~~~------~~~~~~l~~~a~~~g~~vi~DIs   71 (244)
T d1x7fa2           2 ERKLGISLYPEHSTKEKDMAYISAAARHGFSRIFTCLLSV-NRPKEEI------VAEFKEIINHAKDNNMEVILDVA   71 (244)
T ss_dssp             CCEEEEEECGGGSCHHHHHHHHHHHHTTTEEEEEEEECCC---------------HHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CCCHHHH------HHHHHHHHHHHHHCCCEEEEECC
T ss_conf             7336899716999879999999999987998897137667-8887899------99999999999987999999868


No 110
>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=24.41  E-value=18  Score=13.84  Aligned_cols=32  Identities=22%  Similarity=0.248  Sum_probs=28.1

Q ss_pred             CEEEEEECCC---CHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             7399997798---0389999999978997899995
Q gi|254780768|r    2 KRLLIIAGSG---MLPYYVAKAARLKNDEPVIASV   33 (281)
Q Consensus         2 ~kigIIAG~G---~LP~~ia~~~~~~g~~~~ii~l   33 (281)
                      +|++||.|.|   -+=..+|+.+-+.|.++++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~   36 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             95899969999972999999999986998999707


No 111
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}
Probab=24.25  E-value=18  Score=13.82  Aligned_cols=28  Identities=18%  Similarity=0.064  Sum_probs=24.6

Q ss_pred             EEEECCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             9997798038999999997899789999
Q gi|254780768|r    5 LIIAGSGMLPYYVAKAARLKNDEPVIAS   32 (281)
Q Consensus         5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~   32 (281)
                      +||-|+|.==..+|..+.++|.++.++-
T Consensus        10 vIVVGsG~aG~v~A~rLaeaG~~VlvLE   37 (370)
T d3coxa1          10 ALVIGSGYGGAVAALRLTQAGIPTQIVE   37 (370)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9997847899999999987879399996


No 112
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.14  E-value=14  Score=14.49  Aligned_cols=49  Identities=16%  Similarity=0.188  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             3589999999997697482112225242035433455465323478899
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL  155 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~  155 (281)
                      ..||.+..+.|.++|+.=++..++....=++.|.+...-+++++.-.-.
T Consensus         6 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~~K~~L~~~~   54 (73)
T d1t56a1           6 LAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTL   54 (73)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
T ss_conf             9999999999997591507799999986988889988884999999999


No 113
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=24.10  E-value=12  Score=14.91  Aligned_cols=47  Identities=17%  Similarity=0.236  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             35899999999976974821122252420354334554653234788
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      +.||.+....|.++|++=++..++....=+++|-+...=|++++.-.
T Consensus         7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F~~K~~L~~   53 (74)
T d1v7ba1           7 EMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHFPSRHALLL   53 (74)
T ss_dssp             HHHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHHHHHCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHH
T ss_conf             99999999999985956357999998849692238550799999999


No 114
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=23.66  E-value=16  Score=14.12  Aligned_cols=49  Identities=10%  Similarity=0.139  Sum_probs=43.0

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             0358999999999769748211222524203543345546532347889
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI  154 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI  154 (281)
                      -+.|+.+-.+.|.++|+.-++..++....=.+.|.+...-|++.+...-
T Consensus         7 r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~   55 (75)
T d2hyja1           7 RGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQIS   55 (75)
T ss_dssp             HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHTTCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
T ss_conf             9999999999999759030769999998890989998888299999999


No 115
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=23.42  E-value=18  Score=13.72  Aligned_cols=35  Identities=20%  Similarity=0.223  Sum_probs=23.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             973999977980389999999978997899995486
Q gi|254780768|r    1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNE   36 (281)
Q Consensus         1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~   36 (281)
                      |+|++|| |+|.==+..|..+.+.|...-++.++..
T Consensus         4 ~KrVaII-GaG~sGl~~A~~L~~~~~~~~v~vfEk~   38 (335)
T d2gv8a1           4 IRKIAII-GAGPSGLVTAKALLAEKAFDQVTLFERR   38 (335)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred             CCEEEEE-CCCHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             9869998-9599999999999982989988999789


No 116
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=23.13  E-value=13  Score=14.68  Aligned_cols=47  Identities=17%  Similarity=0.148  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             35899999999976974821122252420354334554653234788
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      ..|+.+-...|.++|+.=++..++....=++.|-+...-|++++...
T Consensus        10 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~y~~F~sKe~L~~   56 (78)
T d2o7ta1          10 EHIITTTCNLYRTHHHDSLTMENIAEQAGVGVATLYRNFPDRFTLDM   56 (78)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf             99999999999984914067999998839988799998869999999


No 117
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}
Probab=22.98  E-value=19  Score=13.66  Aligned_cols=74  Identities=12%  Similarity=0.065  Sum_probs=44.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCCCCC---CCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             7399997798038999999997899-7899995486673103---8856787389999999999864954067702423
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKND-EPVIASVLNECSFDWQ---DFECRELPLGDFCVLRSILHQYNIGRIVVAGAID   76 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~-~~~ii~l~~~~~~~~~---~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~   76 (281)
                      =||=|..|+|-+=..+++.+.++|+ +++.+.........+.   ++.+...++..-..+.+...+ +++.|+-+....
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~-~~d~Vih~a~~~   78 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-KCDVVLPLVAIA   78 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-HCSEEEECBCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCCCCCC
T ss_conf             979998987589999999999779988999968972446653689809997805785999999985-898211433332


No 118
>d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]}
Probab=22.94  E-value=19  Score=13.66  Aligned_cols=88  Identities=15%  Similarity=0.044  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHH---HHCCCCCEEEEEEECCEEEEEECCC--C--------HHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             4788998999999---7332672259998197488962534--2--------1799999997543123456677189993
Q gi|254780768|r  150 VKRDILAAMKSAE---ALSELDVGQSAVSIGGRVVALEGIE--G--------TDSMLQRIVDCRNNGRILAGKSGVLVKM  216 (281)
Q Consensus       150 ~~~dI~~g~~i~~---~l~~~DiGQsvVv~~g~ViaiEa~e--G--------TD~mi~R~~~~~~~~~~~~~~~~ilvK~  216 (281)
                      +..-.+.++..++   .-+..-|| +|||.+|.|||.---.  |        --..|.++.......   .-.+.+++=+
T Consensus         7 ~e~~M~~Ai~~A~~a~~~~~~pvG-aViv~~g~Iia~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~---~l~~~~lytT   82 (156)
T d1z3aa1           7 HEYWMRHALTLAKRAWDEREVPVG-AVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNY---RLIDATLYVT   82 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCE-EEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSS---CCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEE-EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC---CCCCCEEEEC
T ss_conf             999999999999985458989899-999989908999601114557540567777677777531365---5457446402


Q ss_pred             CCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf             488875312106627999999998499099997397
Q gi|254780768|r  217 CKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGK  252 (281)
Q Consensus       217 ~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~  252 (281)
                      .-|-           |--...+..+|++-++..+..
T Consensus        83 ~ePC-----------~mC~~aii~~gI~rVvyg~~d  107 (156)
T d1z3aa1          83 LEPC-----------VMCAGAMIHSRIGRVVFGARD  107 (156)
T ss_dssp             ECCC-----------HHHHHHHHHHTCSEEEEEECC
T ss_pred             CCCC-----------CCHHHHHHHHCCCEEEEEEEC
T ss_conf             5665-----------432658987377657997523


No 119
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=22.91  E-value=9.5  Score=15.66  Aligned_cols=47  Identities=19%  Similarity=0.050  Sum_probs=41.5

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             03589999999997697482112225242035433455465323478
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR  152 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~  152 (281)
                      -..|+.+..+.|.++||.=++..++....=++.|.+...-|++++.-
T Consensus         8 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~iY~~F~~k~~L~   54 (68)
T d2id3a1           8 REAVLLAAGDALAADGFDALDLGEIARRAGVGKTTVYRRWGTPGGLA   54 (68)
T ss_dssp             HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHHCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHH
T ss_conf             99999999999998493407799999997868879999985999999


No 120
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=22.67  E-value=11  Score=15.12  Aligned_cols=47  Identities=15%  Similarity=0.133  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             35899999999976974821122252420354334554653234788
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      +.||.+-.+.|.++|+.=++..++....=+++|-+...=|++++...
T Consensus         7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~iY~~F~sK~~L~~   53 (74)
T d2g7sa1           7 DDILQCARTLIIRGGYNSFSYADISQVVGIRNASIHHHFPSKSDLVC   53 (74)
T ss_dssp             HHHHHHHHHHHHHHCGGGCCHHHHHHHHCCCHHHHHHHCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHH
T ss_conf             99999999999985915067999999878184169888839999999


No 121
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=22.37  E-value=19  Score=13.58  Aligned_cols=180  Identities=15%  Similarity=0.035  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCHHHHH
Q ss_conf             38999999997899789999548667310388567873899999999998649540677024232100011102603578
Q gi|254780768|r   13 LPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSL   92 (281)
Q Consensus        13 LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~   92 (281)
                      -|..+.+.+...|.++..+....    .+.+..  .-...++.++++..+.-|+..++.......++         ....
T Consensus        51 ~~~~~k~~l~~~gl~i~~l~~~~----~~~~~~--~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~---------~~~~  115 (271)
T d2q02a1          51 NYNQVRNLAEKYGLEIVTINAVY----PFNQLT--EEVVKKTEGLLRDAQGVGARALVLCPLNDGTI---------VPPE  115 (271)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEET----TTTSCC--HHHHHHHHHHHHHHHHHTCSEEEECCCCSSBC---------CCHH
T ss_pred             CHHHHHHHHHHCCCCEEEEECCC----CCCCCC--HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC---------CHHH
T ss_conf             79999999998399478741244----568877--78899999999999982996899935887762---------0088


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             99999987510480358999999999769748211222524203543345546532347889989999997332672259
Q gi|254780768|r   93 RISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAAMKSAEALSELDVGQS  172 (281)
Q Consensus        93 ~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQs  172 (281)
                      .+            -.-|+.+.++.++.|+++.=- .+        +..+      ....+..-+..+++..+. ++|- 
T Consensus       116 ~~------------~~~l~~l~~~a~~~gv~l~lE-~~--------~~~~------~~~~~~~~~~~li~~~~~-~~g~-  166 (271)
T d2q02a1         116 VT------------VEAIKRLSDLFARYDIQGLVE-PL--------GFRV------SSLRSAVWAQQLIREAGS-PFKV-  166 (271)
T ss_dssp             HH------------HHHHHHHHHHHHTTTCEEEEC-CC--------CSTT------CSCCCHHHHHHHHHHHTC-CCEE-
T ss_pred             HH------------HHHHHHHHHHHCCCCEEEEEE-EC--------CCCC------CCCCCHHHHHHHHHHHCC-CCCE-
T ss_conf             99------------999999988735278289996-16--------7767------653889999999997288-6310-


Q ss_pred             EEEECCEEEEEECCCCHH--HHHHHHHHHHHHCCCCCCCCEEEEEECCCCC-------CCEEEECCCC----HHHHHHHH
Q ss_conf             998197488962534217--9999999754312345667718999348887-------5312106627----99999999
Q gi|254780768|r  173 AVSIGGRVVALEGIEGTD--SMLQRIVDCRNNGRILAGKSGVLVKMCKSQQ-------DMRADLPSIG----AKTVQNVI  239 (281)
Q Consensus       173 vVv~~g~ViaiEa~eGTD--~mi~R~~~~~~~~~~~~~~~~ilvK~~K~~Q-------D~r~DlP~IG----~~Ti~~~~  239 (281)
                       +..-++.    ...|.+  .++...  ..+.      -.-|=+|-.....       ..|.-.|--|    +..++.+.
T Consensus       167 -~~D~~H~----~~~g~~~~~~~~~l--~~~~------i~~vH~~d~~~~~~~~~~~~~~r~~~~G~G~id~~~i~~~L~  233 (271)
T d2q02a1         167 -LLDTFHH----HLYEEAEKEFASRI--DISA------IGLVHLSGVEDTRPTEALADEQRIMLSEKDVMQNYQQVQRLE  233 (271)
T ss_dssp             -EEEHHHH----HHCTTHHHHHHHHC--CGGG------EEEEEECBCCCCSCGGGCCGGGCBCCCTTCSSCHHHHHHHHH
T ss_pred             -ECCCHHH----HHCCCCHHHHHHHH--CCCC------EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
T ss_conf             -0230668----87089869999883--7381------999998738888864311356231159996347999999999


Q ss_pred             HCCCEEE-EEE
Q ss_conf             8499099-997
Q gi|254780768|r  240 KAGLAGI-ALE  249 (281)
Q Consensus       240 ~ag~~gi-aie  249 (281)
                      ++|++|- .+|
T Consensus       234 ~~GY~G~~s~E  244 (271)
T d2q02a1         234 NMGYRGIYAFE  244 (271)
T ss_dssp             HTTCCSCEEEC
T ss_pred             HCCCCCCEEEE
T ss_conf             80998518999


No 122
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=21.65  E-value=11  Score=15.28  Aligned_cols=48  Identities=13%  Similarity=0.139  Sum_probs=41.4

Q ss_pred             CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             035899999999976974821122252420354334554653234788
Q gi|254780768|r  106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD  153 (281)
Q Consensus       106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d  153 (281)
                      ...||.+-.+.|.++||.=++..+++...=+++|-+...=+++++.-.
T Consensus         2 re~iL~aA~~lf~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~~K~~L~~   49 (69)
T d2i10a1           2 DQVALQTAMELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFE   49 (69)
T ss_dssp             CHHHHHHHHHHHHHHTTTTCCHHHHHHHHTCCHHHHHHHHCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf             999999999999987906277999999868786299888859999999


No 123
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=21.54  E-value=17  Score=13.93  Aligned_cols=47  Identities=28%  Similarity=0.282  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCC-HHHHHH
Q ss_conf             35899999999976974821122252420354334554653-234788
Q gi|254780768|r  107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPN-RDVKRD  153 (281)
Q Consensus       107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~-~~~~~d  153 (281)
                      +.|+.+-.+.|.++|++=++..++..+.=++.|.+...-|+ +++.-.
T Consensus         5 ~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~iy~~F~~~Ke~L~~   52 (73)
T d1sgma1           5 EKILHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFFPNGKEELAI   52 (73)
T ss_dssp             HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCSCHHHHSTTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHH
T ss_conf             999999999999849241779999998688877999985998999999


No 124
>d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4 [TaxId: 10665]}
Probab=21.38  E-value=20  Score=13.45  Aligned_cols=59  Identities=10%  Similarity=0.095  Sum_probs=39.1

Q ss_pred             CCEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECHHHC
Q ss_conf             771899934888753121066279999999984990999973977998589999999987968999577545
Q gi|254780768|r  209 KSGVLVKMCKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCGIDREFA  280 (281)
Q Consensus       209 ~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g~~~~~~  280 (281)
                      .+++++-+.-|=           +.-.+.+..+|++-++.....-  -+.....++.+++||-+..+..++.
T Consensus       121 ~~~~ly~t~~PC-----------~~Ca~~i~~~gI~~V~~~~~~~--~~~~~~~~~l~~~gI~v~~i~~~~~  179 (193)
T d1vq2a_         121 EGATMYVTLSPC-----------PDCAKAIAQSGIKKLVYCETYD--KNKPGWDDILRNAGIEVFNVPKKNL  179 (193)
T ss_dssp             TTCEEEEEECCC-----------HHHHHHHHHHTCCEEEEEECCT--TCCTTTTHHHHHTTCEEEECCGGGC
T ss_pred             CCCEEEECCCCC-----------HHHHHHHHHCCCCEEEEEECCC--CCCHHHHHHHHHCCCEEEECCHHHH
T ss_conf             775477258996-----------7899999851578899972799--8547899999987998995399999


No 125
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]}
Probab=21.12  E-value=20  Score=13.41  Aligned_cols=55  Identities=9%  Similarity=-0.098  Sum_probs=21.8

Q ss_pred             HHHHHHHCCCCEEEEEECC-CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             9999997899789999548-66731038856787389999999999864954067702
Q gi|254780768|r   17 VAKAARLKNDEPVIASVLN-ECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG   73 (281)
Q Consensus        17 ia~~~~~~g~~~~ii~l~~-~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG   73 (281)
                      ..+.++..|.+.+-+.+.= .-++.-..+...  ....+.++++..+++|+.=++=.|
T Consensus        41 ~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~--~~~~l~~~l~~a~~~Gl~vil~~g   96 (354)
T d1tg7a5          41 IFEKVKALGFNCVSFYVDWALLEGNPGHYSAE--GIFDLQPFFDAAKEAGIYLLARPG   96 (354)
T ss_dssp             HHHHHHTTTCCEEEEECCHHHHCSBTTBCCCC--GGGCSHHHHHHHHHHTCEEEEECC
T ss_pred             HHHHHHHCCCCEEEEECCHHCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEECCC
T ss_conf             99999972998899854221048989860453--146699999999975998997688


No 126
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.81  E-value=21  Score=13.37  Aligned_cols=74  Identities=14%  Similarity=0.057  Sum_probs=50.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCC--------CCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             739999779803899999999789978999954866731--------038856787389999999999864954067702
Q gi|254780768|r    2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFD--------WQDFECRELPLGDFCVLRSILHQYNIGRIVVAG   73 (281)
Q Consensus         2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~--------~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG   73 (281)
                      +|+=|..|+|-+=..+++.+.++|++++.+.........        .+++.+...++.+...+.+.+.......++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf             98999788878999999999978398999989997651777987333689589975056857754311033322222333


Q ss_pred             CC
Q ss_conf             42
Q gi|254780768|r   74 AI   75 (281)
Q Consensus        74 ~V   75 (281)
                      ..
T Consensus        81 ~~   82 (321)
T d1rpna_          81 AQ   82 (321)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             33


No 127
>d1r89a3 d.58.16.2 (A:258-437) tRNA nucleotidyltransferase, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.78  E-value=21  Score=13.37  Aligned_cols=109  Identities=17%  Similarity=0.088  Sum_probs=57.7

Q ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHH-
Q ss_conf             9999999864954067702423210001110260357899999987510480358999999999769748211222524-
Q gi|254780768|r   55 CVLRSILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPE-  133 (281)
Q Consensus        55 g~li~~Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~-  133 (281)
                      ..+.+.|++++-.-++.  .+ +.|.+       ..|...+++     ++    ..+++.+.++++||+|+.+.-...+ 
T Consensus         8 ~~i~~~l~~Rgt~~~~v--~f-~~pd~-------vdDil~pQl-----~R----~~~sl~~~Le~~GF~Vlrs~~~~de~   68 (180)
T d1r89a3           8 ERLRKIVEERGTAVFAV--KF-RKPDI-------VDDNLYPQL-----ER----ASRKIFEFLERENFMPLRSAFKASEE   68 (180)
T ss_dssp             HHHHHHHHHHTCEEEEE--EE-ECCSC-------CHHHHHHHH-----HH----HHHHHHHHHHHTTCCEEEEEEEECSS
T ss_pred             HHHHHHHHHCCCEEEEE--EE-CCCCC-------CCCCHHHHH-----HH----HHHHHHHHHHHCCCEEEEEEEEECCC
T ss_conf             99999998679669999--94-89999-------853225899-----99----99999999998799899878874698


Q ss_pred             ---HCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHH
Q ss_conf             ---2035--------433455465323478899899999973326722599981974889625342179
Q gi|254780768|r  134 ---LLVQ--------VGSLGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGTDS  191 (281)
Q Consensus       134 ---ll~~--------~G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~  191 (281)
                         ++..        .-...++.....     +++-+...+   .+. =++=|.+|++.+..-..=|++
T Consensus        69 ~~~ll~El~~~~lp~v~~h~GPpv~~~-----~~~~kFi~k---~~~-~g~~I~~gRl~~~~~Rky~~a  128 (180)
T d1r89a3          69 FCYLLFECQIKEISRVFRRMGPQFEDE-----RNVKKFLSR---NRA-FRPFIENGRWWAFEMRKFTTP  128 (180)
T ss_dssp             EEEEEEEESCSCCCSEEEEEEEETTCH-----HHHHHHHHS---CCS-SCCEEETTEEEEEEECSCSSH
T ss_pred             EEEEEEEEEECCCCCCEEECCCCCCCC-----CHHHHHHHH---CCC-CCCEEECCEEEEEEEEEECCH
T ss_conf             799999974054567263029596210-----228888773---576-686288999999997750789


No 128
>d1b22a_ a.60.4.1 (A:) DNA repair protein Rad51, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.48  E-value=8.6  Score=15.96  Aligned_cols=21  Identities=24%  Similarity=0.317  Sum_probs=10.9

Q ss_pred             EEECCCCHHHHHHHHHCCCEE
Q ss_conf             210662799999999849909
Q gi|254780768|r  225 ADLPSIGAKTVQNVIKAGLAG  245 (281)
Q Consensus       225 ~DlP~IG~~Ti~~~~~ag~~g  245 (281)
                      ++.|-||+.|++.+.+||+..
T Consensus        13 L~~~Gig~~~i~kL~~aG~~T   33 (70)
T d1b22a_          13 LEQCGINANDVKKLEEAGFHT   33 (70)
T ss_dssp             HHHTTCSHHHHHHHHTTCCSS
T ss_pred             HHHCCCCHHHHHHHHHCCCCH
T ss_conf             860899999999999968634


No 129
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}
Probab=20.26  E-value=21  Score=13.30  Aligned_cols=63  Identities=13%  Similarity=0.156  Sum_probs=39.7

Q ss_pred             CEEEEEECC-CC--HHHHHHHHHHHCCCCEEEEEECCCCCC----C-CC-CCCEEEEE---HHHHHHHHHHHHHC
Q ss_conf             739999779-80--389999999978997899995486673----1-03-88567873---89999999999864
Q gi|254780768|r    2 KRLLIIAGS-GM--LPYYVAKAARLKNDEPVIASVLNECSF----D-WQ-DFECRELP---LGDFCVLRSILHQY   64 (281)
Q Consensus         2 ~kigIIAG~-G~--LP~~ia~~~~~~g~~~~ii~l~~~~~~----~-~~-~~~~~~~~---ig~ig~li~~Lk~~   64 (281)
                      +|.++|.|. |.  +=..+|+.+...|.++++.....+...    + +. +.......   ..++..+++.+++.
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHC
T ss_conf             977999799999779999999999869999999698589999999870886026764112332212211001210


Done!