Query gi|254780768|ref|YP_003065181.1| hypothetical protein CLIBASIA_03295 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 281 No_of_seqs 128 out of 720 Neff 6.7 Searched_HMMs 13730 Date Wed Jun 1 07:12:57 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780768.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1zcza2 c.97.1.4 (A:158-452) A 97.7 0.0011 7.9E-08 42.2 13.7 112 139-274 171-287 (295) 2 d1g8ma2 c.97.1.4 (A:201-593) A 93.7 0.23 1.7E-05 26.5 12.6 118 141-274 206-385 (393) 3 d1kjqa2 c.30.1.1 (A:2-112) Gly 92.3 0.29 2.1E-05 25.9 7.1 69 2-71 12-80 (111) 4 d1hdoa_ c.2.1.2 (A:) Biliverdi 90.2 0.52 3.8E-05 24.2 6.7 70 1-72 3-74 (205) 5 d1vhqa_ c.23.16.2 (A:) Putativ 89.5 0.57 4.1E-05 23.9 6.4 181 1-200 1-216 (217) 6 d3etja2 c.30.1.1 (A:1-78) N5-c 89.0 0.14 1E-05 28.0 3.0 37 1-38 1-37 (78) 7 d1pfka_ c.89.1.1 (A:) ATP-depe 88.4 0.2 1.5E-05 27.0 3.5 75 1-76 2-105 (320) 8 d2pv7a2 c.2.1.6 (A:92-243) Pre 87.7 0.43 3.1E-05 24.7 4.9 37 1-37 9-45 (152) 9 d4pfka_ c.89.1.1 (A:) ATP-depe 85.4 0.26 1.9E-05 26.2 2.8 76 1-76 1-104 (319) 10 d3cuma2 c.2.1.6 (A:1-162) Hydr 85.4 0.64 4.6E-05 23.6 4.7 150 1-166 1-156 (162) 11 d2g5ca2 c.2.1.6 (A:30-200) Pre 82.8 1 7.3E-05 22.3 4.8 33 1-34 1-33 (171) 12 d1oi4a1 c.23.16.2 (A:23-192) H 81.7 1.6 0.00011 20.9 6.6 157 2-200 2-166 (170) 13 d1jfla1 c.78.2.1 (A:1-115) Asp 80.2 1.8 0.00013 20.6 6.1 77 1-77 1-86 (115) 14 d1jvna2 c.23.16.1 (A:-3-229) G 80.1 1.5 0.00011 21.1 4.9 67 1-70 4-72 (232) 15 d1udca_ c.2.1.2 (A:) Uridine d 78.6 2 0.00014 20.3 7.8 75 1-76 1-84 (338) 16 d1n7ha_ c.2.1.2 (A:) GDP-manno 75.2 2.4 0.00018 19.7 6.1 75 2-76 1-90 (339) 17 d1t2aa_ c.2.1.2 (A:) GDP-manno 74.6 2.5 0.00018 19.6 6.0 75 2-76 1-90 (347) 18 d1uzma1 c.2.1.2 (A:9-245) beta 74.1 2.6 0.00019 19.5 9.4 164 1-177 6-176 (237) 19 d1y81a1 c.2.1.8 (A:6-121) Hypo 72.7 2.7 0.0002 19.3 4.6 73 2-74 2-89 (116) 20 d2arka1 c.23.5.8 (A:1-184) Fla 72.6 2.6 0.00019 19.5 4.4 152 1-171 1-169 (184) 21 d1q7ra_ c.23.16.1 (A:) Hypothe 70.8 2.8 0.00021 19.2 4.3 57 3-64 8-64 (202) 22 d2c5aa1 c.2.1.2 (A:13-375) GDP 70.7 3.1 0.00022 19.0 6.2 71 3-75 17-89 (363) 23 d1lssa_ c.2.1.9 (A:) Ktn Mja21 70.6 2.4 0.00018 19.6 3.9 30 6-35 4-33 (132) 24 d1id1a_ c.2.1.9 (A:) Rck domai 70.5 2.8 0.0002 19.2 4.2 60 5-68 6-71 (153) 25 d1jaya_ c.2.1.6 (A:) Coenzyme 70.3 2.3 0.00017 19.8 3.8 33 2-34 1-33 (212) 26 d2f1ka2 c.2.1.6 (A:1-165) Prep 69.9 2.9 0.00021 19.2 4.2 31 3-34 2-32 (165) 27 d1ek6a_ c.2.1.2 (A:) Uridine d 68.4 3.4 0.00025 18.7 5.5 76 1-76 1-92 (346) 28 d1k9vf_ c.23.16.1 (F:) GAT sub 67.7 0.94 6.9E-05 22.4 1.3 29 1-31 1-30 (200) 29 d2hmva1 c.2.1.9 (A:7-140) Ktn 66.4 2.4 0.00018 19.7 3.2 38 6-43 4-41 (134) 30 d2q46a1 c.2.1.2 (A:2-253) Hypo 64.5 4.1 0.0003 18.2 5.2 72 1-74 3-77 (252) 31 d1db3a_ c.2.1.2 (A:) GDP-manno 64.4 4.1 0.0003 18.1 4.6 75 2-76 1-89 (357) 32 d1rkxa_ c.2.1.2 (A:) CDP-gluco 64.1 4.1 0.0003 18.1 7.2 75 2-76 9-90 (356) 33 d2d59a1 c.2.1.8 (A:4-142) Hypo 63.2 4.1 0.0003 18.1 3.9 30 3-32 21-53 (139) 34 d2vzsa5 c.1.8.3 (A:336-674) Ex 61.3 4.6 0.00034 17.8 4.4 28 49-76 36-63 (339) 35 d2nv0a1 c.23.16.1 (A:1-195) Hy 60.8 4.7 0.00034 17.7 5.0 31 1-32 1-31 (195) 36 d1xima_ c.1.15.3 (A:) D-xylose 59.1 5 0.00037 17.5 6.1 155 108-271 68-240 (392) 37 d1kewa_ c.2.1.2 (A:) dTDP-gluc 57.7 5.3 0.00039 17.4 7.3 74 2-76 1-84 (361) 38 d2fexa1 c.23.16.2 (A:1-188) Hy 57.6 2.1 0.00015 20.1 1.6 161 1-202 1-168 (188) 39 d1vl0a_ c.2.1.2 (A:) DTDP-4-de 57.6 4.3 0.00032 18.0 3.2 230 1-276 2-236 (281) 40 d1ulza2 c.30.1.1 (A:1-114) Bio 54.8 5.2 0.00038 17.4 3.3 67 1-67 1-75 (114) 41 d1thta_ c.69.1.13 (A:) Myristo 53.2 6.2 0.00045 16.9 4.8 62 12-74 46-110 (302) 42 d2ahra2 c.2.1.6 (A:1-152) Pyrr 53.2 6.3 0.00046 16.9 3.6 30 3-33 2-31 (152) 43 d2csua1 c.2.1.8 (A:1-129) Acet 52.9 2.4 0.00017 19.7 1.3 75 2-76 9-100 (129) 44 d2f5va1 c.3.1.2 (A:43-354,A:55 52.8 6.3 0.00046 16.9 3.7 28 5-32 7-34 (379) 45 d1h5qa_ c.2.1.2 (A:) Mannitol 51.4 6.6 0.00048 16.7 10.9 82 2-83 9-105 (260) 46 d1pgja2 c.2.1.6 (A:1-178) 6-ph 50.9 6.8 0.00049 16.7 4.3 148 1-167 2-164 (178) 47 d1iuka_ c.2.1.8 (A:) Hypotheti 50.3 2.9 0.00021 19.1 1.4 31 3-33 15-48 (136) 48 d2d1pb1 c.114.1.1 (B:1-119) tR 49.3 5.6 0.00041 17.2 2.7 75 1-75 1-82 (119) 49 d1e5qa1 c.2.1.3 (A:2-124,A:392 46.2 8 0.00058 16.2 4.6 35 2-37 3-37 (182) 50 d1jx7a_ c.114.1.1 (A:) Hypothe 44.8 8.4 0.00061 16.0 6.4 72 1-75 1-81 (117) 51 d1i36a2 c.2.1.6 (A:1-152) Cons 43.8 8.7 0.00063 15.9 4.2 28 3-31 2-29 (152) 52 d2j9ga2 c.30.1.1 (A:1-114) Bio 43.2 8.9 0.00064 15.9 3.6 67 1-67 1-76 (114) 53 d1e6ua_ c.2.1.2 (A:) GDP-4-ket 42.0 9.2 0.00067 15.8 3.6 34 2-35 3-36 (315) 54 d2g0wa1 c.1.15.4 (A:10-284) Hy 41.9 9.2 0.00067 15.7 2.9 19 232-250 220-240 (275) 55 d2i1qa1 a.60.4.1 (A:5-64) DNA 40.9 6.2 0.00045 16.9 1.8 20 226-245 3-22 (60) 56 d1ko7a1 c.98.2.1 (A:1-129) HPr 40.6 7.1 0.00052 16.5 2.1 43 233-278 71-113 (129) 57 d1vmka_ c.56.2.1 (A:) Purine n 40.6 9.7 0.00071 15.6 3.1 27 49-75 86-112 (265) 58 d1jz8a5 c.1.8.3 (A:334-625) be 40.0 9.9 0.00072 15.6 3.2 26 50-75 35-60 (292) 59 d1n1ea2 c.2.1.6 (A:9-197) Glyc 39.8 9.2 0.00067 15.7 2.6 32 1-33 7-38 (189) 60 d1vhta_ c.37.1.1 (A:) Dephosph 39.7 9.7 0.00071 15.6 2.7 76 1-88 2-78 (208) 61 d1jjva_ c.37.1.1 (A:) Dephosph 38.3 8.8 0.00064 15.9 2.3 29 1-29 1-30 (205) 62 d2hy5b1 c.114.1.1 (B:205-336) 38.2 5.3 0.00039 17.4 1.2 74 1-75 1-82 (132) 63 d1i24a_ c.2.1.2 (A:) Sulfolipi 37.9 11 0.00077 15.3 4.0 74 2-75 2-100 (393) 64 d2fy8a1 c.2.1.9 (A:116-244) Po 37.8 4.2 0.0003 18.1 0.6 60 5-68 3-62 (129) 65 d2np5a1 a.4.1.9 (A:9-77) Trans 37.7 7.3 0.00053 16.4 1.8 49 107-155 4-52 (69) 66 d1pzna1 a.60.4.1 (A:35-95) DNA 37.3 8.1 0.00059 16.1 2.0 20 226-245 5-24 (61) 67 d1yqga2 c.2.1.6 (A:1-152) Pyrr 37.3 11 0.00079 15.3 3.8 29 3-32 2-31 (152) 68 d1qsga_ c.2.1.2 (A:) Enoyl-ACP 36.0 11 0.00083 15.1 4.7 35 2-36 5-42 (258) 69 d2a9va1 c.23.16.1 (A:1-196) GM 34.3 12 0.00088 15.0 5.0 32 1-32 1-32 (196) 70 d1gpja2 c.2.1.7 (A:144-302) Gl 34.2 12 0.00088 15.0 3.3 72 5-82 27-100 (159) 71 d7reqa2 c.23.6.1 (A:561-728) M 34.1 12 0.00089 14.9 7.2 15 112-126 56-70 (168) 72 d1ycga1 c.23.5.1 (A:251-399) N 33.9 12 0.00089 14.9 5.5 130 3-165 4-148 (149) 73 d2fywa1 c.135.1.1 (A:1-265) Hy 33.2 13 0.00091 14.8 2.9 20 231-250 206-225 (265) 74 d2g7la1 a.4.1.9 (A:16-83) Puta 33.1 11 0.00082 15.2 2.2 47 107-153 7-53 (68) 75 d2gx8a1 c.135.1.1 (A:4-373) Ni 33.1 13 0.00092 14.8 3.1 26 175-200 240-265 (370) 76 d1yq2a5 c.1.8.3 (A:313-609) be 33.1 13 0.00092 14.8 4.1 24 52-75 36-59 (297) 77 d2fd5a1 a.4.1.9 (A:1-76) Proba 32.8 13 0.00093 14.8 4.7 49 106-154 9-57 (76) 78 d1qyca_ c.2.1.2 (A:) Phenylcou 32.7 13 0.00093 14.8 4.5 33 1-33 3-35 (307) 79 d1qyda_ c.2.1.2 (A:) Pinoresin 32.6 13 0.00093 14.8 4.5 33 1-33 3-35 (312) 80 d1r0ka2 c.2.1.3 (A:3-126,A:265 32.5 13 0.00094 14.8 4.7 59 1-74 2-60 (150) 81 d2oi8a1 a.4.1.9 (A:8-86) Putat 31.8 13 0.00096 14.7 2.5 50 106-155 11-60 (79) 82 d1vpda2 c.2.1.6 (A:3-163) Hydr 31.3 13 0.00098 14.6 4.5 148 3-166 2-155 (161) 83 d1f0ka_ c.87.1.2 (A:) Peptidog 30.9 14 0.001 14.6 7.3 73 2-74 1-99 (351) 84 d2iu5a1 a.4.1.9 (A:1-71) Trans 30.0 14 0.001 14.5 5.0 52 106-157 8-59 (71) 85 d1zk8a1 a.4.1.9 (A:6-77) Trans 29.5 13 0.00091 14.9 1.9 49 106-154 5-53 (72) 86 d1ks9a2 c.2.1.6 (A:1-167) Keto 29.5 14 0.001 14.4 4.4 33 3-36 2-34 (167) 87 d1iowa1 c.30.1.2 (A:1-96) D-Al 29.5 14 0.0011 14.4 6.0 35 2-36 3-45 (96) 88 d1gsoa2 c.30.1.1 (A:-2-103) Gl 29.1 15 0.0011 14.4 4.0 96 6-133 6-102 (105) 89 d1yaca_ c.33.1.3 (A:) YcaC {Es 28.9 6.9 0.0005 16.6 0.5 114 16-136 41-173 (204) 90 d1nhpa2 c.3.1.5 (A:120-242) NA 28.9 15 0.0011 14.4 6.5 27 7-33 35-61 (123) 91 d1oc2a_ c.2.1.2 (A:) dTDP-gluc 28.4 15 0.0011 14.3 6.1 72 1-74 2-82 (346) 92 d1rh9a1 c.1.8.3 (A:30-399) Bet 27.9 15 0.0011 14.3 2.7 17 53-69 40-56 (370) 93 d2gena1 a.4.1.9 (A:6-75) Proba 27.5 13 0.00096 14.7 1.7 48 107-154 3-50 (70) 94 d1xgka_ c.2.1.2 (A:) Negative 27.4 16 0.0011 14.2 4.6 32 2-33 4-35 (350) 95 d1tksa_ d.115.1.2 (A:) 3,4-dih 27.1 16 0.0012 14.2 4.0 45 232-277 145-195 (202) 96 d1orra_ c.2.1.2 (A:) CDP-tyvel 27.0 16 0.0012 14.1 6.9 74 3-76 2-83 (338) 97 d2fq4a1 a.4.1.9 (A:9-77) Trans 26.6 7.1 0.00052 16.5 0.2 47 106-152 6-52 (69) 98 d3c07a1 a.4.1.9 (A:15-89) Puta 26.4 16 0.0012 14.1 3.0 49 106-154 7-55 (75) 99 d1mv8a2 c.2.1.6 (A:1-202) GDP- 26.4 16 0.0012 14.1 4.3 31 3-34 2-32 (202) 100 d2hkua1 a.4.1.9 (A:18-87) Puta 25.6 16 0.0011 14.2 1.8 47 107-154 4-50 (70) 101 d2csua2 c.23.4.1 (A:130-290) A 25.6 17 0.0012 14.0 4.0 114 2-129 21-148 (161) 102 d1szpa1 a.60.4.1 (A:81-144) DN 25.2 9 0.00066 15.8 0.6 20 226-245 7-26 (64) 103 d2a35a1 c.2.1.2 (A:4-215) Hypo 25.2 17 0.0012 13.9 4.4 70 2-75 3-73 (212) 104 d1vkma_ c.138.1.1 (A:) Hypothe 25.0 17 0.0013 13.9 2.1 148 16-177 44-223 (292) 105 d1l8qa2 c.37.1.20 (A:77-289) C 24.9 17 0.0013 13.9 3.7 111 9-124 48-185 (213) 106 d1ulsa_ c.2.1.2 (A:) beta-keto 24.8 17 0.0013 13.9 10.0 166 2-177 5-179 (242) 107 d1pb6a1 a.4.1.9 (A:14-85) Hypo 24.6 16 0.0012 14.1 1.7 48 107-154 7-54 (72) 108 d1rkta1 a.4.1.9 (A:2-82) Hypot 24.6 18 0.0013 13.9 2.4 49 106-154 13-61 (81) 109 d1x7fa2 c.1.8.12 (A:1-244) Out 24.4 18 0.0013 13.8 3.8 66 1-73 2-71 (244) 110 d1uh5a_ c.2.1.2 (A:) Enoyl-ACP 24.4 18 0.0013 13.8 4.8 32 2-33 2-36 (329) 111 d3coxa1 c.3.1.2 (A:5-318,A:451 24.3 18 0.0013 13.8 3.5 28 5-32 10-37 (370) 112 d1t56a1 a.4.1.9 (A:22-94) Ethr 24.1 14 0.001 14.5 1.4 49 107-155 6-54 (73) 113 d1v7ba1 a.4.1.9 (A:1-74) Trans 24.1 12 0.0009 14.9 1.1 47 107-153 7-53 (74) 114 d2hyja1 a.4.1.9 (A:8-82) Putat 23.7 16 0.0012 14.1 1.6 49 106-154 7-55 (75) 115 d2gv8a1 c.3.1.5 (A:3-180,A:288 23.4 18 0.0013 13.7 5.2 35 1-36 4-38 (335) 116 d2o7ta1 a.4.1.9 (A:1-78) Trans 23.1 13 0.00097 14.7 1.1 47 107-153 10-56 (78) 117 d2blla1 c.2.1.2 (A:316-657) Po 23.0 19 0.0014 13.7 5.1 74 2-76 1-78 (342) 118 d1z3aa1 c.97.1.2 (A:13-168) tR 22.9 19 0.0014 13.7 5.5 88 150-252 7-107 (156) 119 d2id3a1 a.4.1.9 (A:13-80) Puta 22.9 9.5 0.00069 15.7 0.3 47 106-152 8-54 (68) 120 d2g7sa1 a.4.1.9 (A:3-76) Putat 22.7 11 0.00083 15.1 0.7 47 107-153 7-53 (74) 121 d2q02a1 c.1.15.4 (A:1-271) Put 22.4 19 0.0014 13.6 3.7 180 13-249 51-244 (271) 122 d2i10a1 a.4.1.9 (A:10-78) Puta 21.7 11 0.00079 15.3 0.4 48 106-153 2-49 (69) 123 d1sgma1 a.4.1.9 (A:5-77) Putat 21.5 17 0.0013 13.9 1.4 47 107-153 5-52 (73) 124 d1vq2a_ c.97.1.2 (A:) Deoxycyt 21.4 20 0.0015 13.4 2.6 59 209-280 121-179 (193) 125 d1tg7a5 c.1.8.14 (A:41-394) Be 21.1 20 0.0015 13.4 2.5 55 17-73 41-96 (354) 126 d1rpna_ c.2.1.2 (A:) GDP-manno 20.8 21 0.0015 13.4 6.7 74 2-75 1-82 (321) 127 d1r89a3 d.58.16.2 (A:258-437) 20.8 21 0.0015 13.4 1.9 109 55-191 8-128 (180) 128 d1b22a_ a.60.4.1 (A:) DNA repa 20.5 8.6 0.00062 16.0 -0.3 21 225-245 13-33 (70) 129 d2h7ma1 c.2.1.2 (A:2-269) Enoy 20.3 21 0.0016 13.3 4.4 63 2-64 6-80 (268) No 1 >d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]} Probab=97.71 E-value=0.0011 Score=42.22 Aligned_cols=112 Identities=16% Similarity=0.071 Sum_probs=83.3 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCH-----HHHHHHHHHHHHHCCCCCCCCEEE Q ss_conf 334554653234788998999999733267225999819748896253421-----799999997543123456677189 Q gi|254780768|r 139 GSLGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGT-----DSMLQRIVDCRNNGRILAGKSGVL 213 (281) Q Consensus 139 G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGT-----D~mi~R~~~~~~~~~~~~~~~~il 213 (281) -+.|+++|++++++|+.+||.+++..-+=-| |+++|+..+++=+=+=- .-.++++++ ..+|+|+ T Consensus 171 ~~vT~~~pt~~e~~dL~FA~~v~k~vkSNAI---vlakn~~tiGiGaGQ~sRvda~~iA~~ka~~--------~~~g~v~ 239 (295) T d1zcza2 171 ELVVGEPLSEKELEDLEFAYRVVEGAKSNAV---LIAKDGVTVGIGSGQPSRKRAAWIATVMAGE--------KAKGAVA 239 (295) T ss_dssp EEEESCCCCHHHHHHHHHHHHHHHHSCSSCE---EEEETTEEEEEECSCSSHHHHHHHHHHHHGG--------GGTTCEE T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCCCCE---EEECCCCEEEEECCCHHHHHHHHHHHHHHHH--------HHCCCEE T ss_conf 4774476643343437999999864576627---9962881787504322367776666765445--------4248279 Q ss_pred EEECCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEE Q ss_conf 9934888753121066279999999984990999973977998589999999987968999 Q gi|254780768|r 214 VKMCKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCG 274 (281) Q Consensus 214 vK~~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g 274 (281) . -|=.-=-+++|+.++++|++.|+ +.|+++ .-+++|+.||++||..+= T Consensus 240 a----------SDAFFPF~D~i~~a~~~Gv~aIi-qPGGSi--rD~evI~aan~~gi~m~f 287 (295) T d1zcza2 240 A----------SDAFFPFPDSLEILAQAGVKAVV-APLGSI--RDEEVIEKARELGITFYK 287 (295) T ss_dssp E----------ESSCCSSHHHHHHHHHTTCCEEE-ECCCCT--THHHHHHHHHHHTCEEEE T ss_pred E----------CCCCCCCCHHHHHHHHCCCEEEE-CCCCCC--CCHHHHHHHHHHCCEEEE T ss_conf 7----------24576885689999985994999-899864--639999999985978998 No 2 >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} Probab=93.68 E-value=0.23 Score=26.54 Aligned_cols=118 Identities=16% Similarity=0.113 Sum_probs=77.4 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECC-----CCHHHHHHHHHHHHHHCCC---------- Q ss_conf 4554653234788998999999733267225999819748896253-----4217999999975431234---------- Q gi|254780768|r 141 LGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGI-----EGTDSMLQRIVDCRNNGRI---------- 205 (281) Q Consensus 141 l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~-----eGTD~mi~R~~~~~~~~~~---------- 205 (281) -+.++|+++++.|+.+||++++..-+=-| |+++|+..++|=+= .=+.-.++++++..-+... T Consensus 206 ~~~~~pt~~e~~dL~FAwkVvK~vKSNAI---vlak~~~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~ 282 (393) T d1g8ma2 206 TKNKTLPESAVRDLIVASIAVKYTQSNSV---CYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAG 282 (393) T ss_dssp SSSCCCCHHHHHHHHHHHHHHHTSCSSCE---EEEETTEEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTT T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEE---EEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH T ss_conf 02345168899999999999862366458---996298688318997654789999999998877640630110000001 Q ss_pred -----------------------------------------------CCCCCEEEEEECCCCCCCEEEECCCCHHHHHHH Q ss_conf -----------------------------------------------566771899934888753121066279999999 Q gi|254780768|r 206 -----------------------------------------------LAGKSGVLVKMCKSQQDMRADLPSIGAKTVQNV 238 (281) Q Consensus 206 -----------------------------------------------~~~~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~~ 238 (281) ..-.|.|+.= |== +|- ++.|+.+ T Consensus 283 ~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l~~~~~~~~~~~~~g~vlAS------DAF--FPF--~D~ie~a 352 (393) T d1g8ma2 283 VKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSS------DAF--FPF--RDNVDRA 352 (393) T ss_dssp CCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCCCHHHHHHHHTTCCCEEEEE------SSC--CSS--THHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEE------CCC--CCC--CHHHHHH T ss_conf 345555416776513543320355666554201431123788764430357857980------268--687--5689999 Q ss_pred HHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEE Q ss_conf 984990999973977998589999999987968999 Q gi|254780768|r 239 IKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCG 274 (281) Q Consensus 239 ~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g 274 (281) +++|.+.| |+.|+++ .-+++|+.||++||..+= T Consensus 353 a~~Gv~aI-iQPGGSi--rD~evI~aan~~~i~M~f 385 (393) T d1g8ma2 353 KRIGVQFI-VAPSGSA--ADEVVIEACNELGITLIH 385 (393) T ss_dssp HTTTEEEE-EEECCCT--THHHHHHHHHHHTCEEEE T ss_pred HHCCCEEE-ECCCCCC--CHHHHHHHHHHHCCEEEE T ss_conf 98599399-8798742--519999999985988998 No 3 >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Probab=92.26 E-value=0.29 Score=25.86 Aligned_cols=69 Identities=19% Similarity=0.142 Sum_probs=47.4 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 7399997798038999999997899789999548667310388567873899999999998649540677 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) .||||+ |+|.|-+.++.++++-|++++++.-...+....-...+...++.+...+.++.++.+++-+.+ T Consensus 12 ~kigIl-GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111) T d1kjqa2 12 TRVMLL-GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111) T ss_dssp CEEEEE-SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE T ss_pred CEEEEE-ECCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEE T ss_conf 799999-377989999999998899899984999983655177689988789999999998627756888 No 4 >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Probab=90.21 E-value=0.52 Score=24.18 Aligned_cols=70 Identities=9% Similarity=-0.048 Sum_probs=48.4 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC--CCCCEEEEEHHHHHHHHHHHHHCCCCEEEEE Q ss_conf 97399997798038999999997899789999548667310--3885678738999999999986495406770 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW--QDFECRELPLGDFCVLRSILHQYNIGRIVVA 72 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~ivma 72 (281) |+||.|+.|.|.+=..+++.+.++|+++.++.-....-+.. .+.+....++.+...+-+.++ +++-|+.+ T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~ 74 (205) T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVL 74 (205) T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEEC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC--CCCEEEEE T ss_conf 8889999998789999999999786989999837164554212353201122211456999865--98789998 No 5 >d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Probab=89.47 E-value=0.57 Score=23.91 Aligned_cols=181 Identities=13% Similarity=0.123 Sum_probs=93.7 Q ss_pred CCEEEEE-EC----CCCHHH---HHHHHHHHCCCCEEEEEECCCCCCCCCCC---C-EEEEEHH-HHHH-------HHHH Q ss_conf 9739999-77----980389---99999997899789999548667310388---5-6787389-9999-------9999 Q gi|254780768|r 1 MKRLLII-AG----SGMLPY---YVAKAARLKNDEPVIASVLNECSFDWQDF---E-CRELPLG-DFCV-------LRSI 60 (281) Q Consensus 1 M~kigII-AG----~G~LP~---~ia~~~~~~g~~~~ii~l~~~~~~~~~~~---~-~~~~~ig-~ig~-------li~~ 60 (281) |+|+++| +| .|.-.. .....++++|+++.+++..+......... . ....++- +-.. -++. T Consensus 1 MkKvaviLsg~g~~DG~E~~E~~~~~~~L~raG~~v~~~sp~~~~~~~~~h~~~~~~~~~r~~~~~~~~i~~~~~~~l~~ 80 (217) T d1vhqa_ 1 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQ 80 (217) T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGG T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHH T ss_conf 98799995588887742098999999999988998999946998452150688862354235243210230135687678 Q ss_pred HHHCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCC Q ss_conf 98649540677024232100011102603578999999875104803589999999997697482112225242035433 Q gi|254780768|r 61 LHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGS 140 (281) Q Consensus 61 Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~ 140 (281) .+...-+-+++.|+.. + ..++. +. ..... .-+-|..+.+.+..+.++.+ .+++-=..|-+++..+. T Consensus 81 v~~~~yDaliiPGG~g--~-~~~l~-~~-------~~~~~-~~~~~~~v~~li~~~~~~gk--~iaaIC~gp~~l~~~~~ 146 (217) T d1vhqa_ 81 ADAAELDALIVPGGFG--A-AKNLS-NF-------ASLGS-ECTVDRELKALAQAMHQAGK--PLGFMCIAPAMLPKIFD 146 (217) T ss_dssp CCGGGCSEEEECCSTH--H-HHTSB-CH-------HHHGG-GCCBCHHHHHHHHHHHHTTC--CEEEETTGGGGHHHHCS T ss_pred CCHHHCCEEEECCCCC--C-HHHHH-HH-------HCCCC-CCCCCHHHHHHHHHHHHCCC--CEEEECHHHHHHHHHHC T ss_conf 8984787899669866--3-77776-52-------10242-12228999999999998699--79998860899999846 Q ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHCC----CCCEEEEEEECCEEEE----------EECCCCHHHHHHHHHHHH Q ss_conf 4554-6532347889989999997332----6722599981974889----------625342179999999754 Q gi|254780768|r 141 LGTC-VPNRDVKRDILAAMKSAEALSE----LDVGQSAVSIGGRVVA----------LEGIEGTDSMLQRIVDCR 200 (281) Q Consensus 141 l~~~-~p~~~~~~dI~~g~~i~~~l~~----~DiGQsvVv~~g~Via----------iEa~eGTD~mi~R~~~~~ 200 (281) +.++ ..+. ..+. .+-+++.|. .++.+.||..+|.++. .|.++|=++|+.++-++. T Consensus 147 ~~~~~~~~~--~~~~---~~~l~~~Ga~~v~~~~~~~vVD~dg~ivTspA~m~a~~i~e~~~gi~klv~~~l~l~ 216 (217) T d1vhqa_ 147 FPLRLTIGT--DIDT---AEVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLA 216 (217) T ss_dssp SCCEECCCS--CHHH---HHHHHHTTCEECCCCTTCCEEETTTTEEEECGGGTCSSHHHHHHHHHHHHHHHHHHH T ss_pred CCCCEEECC--CHHH---HHHHHHCCCCEEECCCCEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC T ss_conf 488715415--8535---999997699089656773899669989926312048789999999999999999864 No 6 >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Probab=88.98 E-value=0.14 Score=28.04 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=31.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCC Q ss_conf 97399997798038999999997899789999548667 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECS 38 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~ 38 (281) |+++||| |+|.|-+..+.++..-|+++.++....... T Consensus 1 ~k~vgIl-G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p 37 (78) T d3etja2 1 MKQVCVL-GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA 37 (78) T ss_dssp CEEEEEE-BCSHHHHHHHHHHGGGTEEEEEECTTSCGG T ss_pred CCEEEEE-CCCHHHHHHHHHHHHCCCEEEEECCCCCCC T ss_conf 9789997-487899999999998699799986999883 No 7 >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Probab=88.37 E-value=0.2 Score=26.96 Aligned_cols=75 Identities=19% Similarity=0.115 Sum_probs=48.4 Q ss_pred CCEEEEEECCCCHHH------HHHHHHHHCCCCEEEEEECCCC---C--------CCCCCC---------CEE---EEEH Q ss_conf 973999977980389------9999999789978999954866---7--------310388---------567---8738 Q gi|254780768|r 1 MKRLLIIAGSGMLPY------YVAKAARLKNDEPVIASVLNEC---S--------FDWQDF---------ECR---ELPL 51 (281) Q Consensus 1 M~kigIIAG~G~LP~------~ia~~~~~~g~~~~ii~l~~~~---~--------~~~~~~---------~~~---~~~i 51 (281) |+||||+-+.|.=|- -+.+.+...|++++-+. .|.. + .....+ .+. ...- T Consensus 2 mkrIgIltsGG~~pg~Na~i~~~v~~~~~~~~~v~g~~-~G~~Gl~~~~~~~l~~~~v~~~~~~gGs~lgt~R~~~~~~~ 80 (320) T d1pfka_ 2 IKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIY-DGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDE 80 (320) T ss_dssp CCEEEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEES-THHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCGGGGSH T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCH T ss_conf 86499986688866889999999999987899899994-66888727985729999998898469985231478877665 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 9999999999864954067702423 Q gi|254780768|r 52 GDFCVLRSILHQYNIGRIVVAGAID 76 (281) Q Consensus 52 g~ig~li~~Lk~~~i~~ivmaG~V~ 76 (281) ....++++.|++++++.++.+|+-. T Consensus 81 ~~~~~~~~~l~~~~I~~li~iGG~~ 105 (320) T d1pfka_ 81 NIRAVAIENLKKRGIDALVVIGGDG 105 (320) T ss_dssp HHHHHHHHHHHHTTCCEEEEEECHH T ss_pred HHHHHHHHHHHHCCCCEEEEECCCH T ss_conf 5550388899876998899967965 No 8 >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Probab=87.74 E-value=0.43 Score=24.74 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=32.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 9739999779803899999999789978999954866 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC 37 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~ 37 (281) |+|+++|.|.|..=.-+|+.++++|+++.+....... T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~ 45 (152) T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 45 (152) T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCC T ss_conf 8869999688978999999999769973851331021 No 9 >d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Probab=85.44 E-value=0.26 Score=26.17 Aligned_cols=76 Identities=20% Similarity=0.065 Sum_probs=50.1 Q ss_pred CCEEEEEECCCCHHH------HHHHHHHHCCCCEEEEE--ECCCCCCC---C-----CCC---------CEE---EEEHH Q ss_conf 973999977980389------99999997899789999--54866731---0-----388---------567---87389 Q gi|254780768|r 1 MKRLLIIAGSGMLPY------YVAKAARLKNDEPVIAS--VLNECSFD---W-----QDF---------ECR---ELPLG 52 (281) Q Consensus 1 M~kigIIAG~G~LP~------~ia~~~~~~g~~~~ii~--l~~~~~~~---~-----~~~---------~~~---~~~ig 52 (281) |+||||+-..|.=|. -+.+.+...|.+++-+. +.|..+.+ + ..+ .+. ...-. T Consensus 1 mkrIaIl~sGG~~pgiNa~i~~~v~~~~~~~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~~~~~ 80 (319) T d4pfka_ 1 MKRIGVLTSGGDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTEE 80 (319) T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHHTTCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTSSSHH T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 98899987688768999999999999987799999983166875679951599899987986486300358888655410 Q ss_pred HHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 999999999864954067702423 Q gi|254780768|r 53 DFCVLRSILHQYNIGRIVVAGAID 76 (281) Q Consensus 53 ~ig~li~~Lk~~~i~~ivmaG~V~ 76 (281) +..++++.|++++++.++.+|+-. T Consensus 81 ~~~~~~~~l~~~~I~~li~iGG~~ 104 (319) T d4pfka_ 81 GQKKGIEQLKKHGIQGLVVIGGDG 104 (319) T ss_dssp HHHHHHHHHHHHTCCEEEEEECHH T ss_pred HHHHHHHHHHHHCCCEEEEECCCH T ss_conf 044699999983366389953836 No 10 >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Probab=85.42 E-value=0.64 Score=23.57 Aligned_cols=150 Identities=12% Similarity=0.013 Sum_probs=82.9 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE-EEHHHHHHHHHHHHHCCCCEEEEECCCCCCC Q ss_conf 973999977980389999999978997899995486673103885678-7389999999999864954067702423210 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRE-LPLGDFCVLRSILHQYNIGRIVVAGAIDRRP 79 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~-~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP 79 (281) |+|+|+| |-|..=..+|+.+.++|+++++..........+....... -... +.++. ++-++.+=.. .+ T Consensus 1 M~kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~------e~~~~--~diii~~v~~--~~ 69 (162) T d3cuma2 1 MKQIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSAR------DAVQG--ADVVISMLPA--SQ 69 (162) T ss_dssp CCEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHH------HHHTS--CSEEEECCSC--HH T ss_pred CCEEEEE-EEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHHH------HHCCC--CCEEEECCCC--HH T ss_conf 9999999-778999999999997799689997830145553211001110034------44036--6701222454--06 Q ss_pred CHHHHCCCHHHHHHHHHHH-----HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0011102603578999999-----87510480358999999999769748211222524203543345546532347889 Q gi|254780768|r 80 NVQDLCFSIKDSLRISKMI-----WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 80 ~~~~l~~D~~~~~~l~k~l-----~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) ........... +...+ .-.....+-..-+.+.+.+++.|++.+++.-.-..--+..|.++---.. +...+ T Consensus 70 ~~~~v~~~~~~---~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~~a~~G~l~~~~gG--~~~~~ 144 (162) T d3cuma2 70 HVEGLYLDDDG---LLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGG--DAEAL 144 (162) T ss_dssp HHHHHHHSTTC---HHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEES--CHHHH T ss_pred HHHHHHHCCCC---CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECC--CHHHH T ss_conf 58988734333---22358999889978988878999999999977992893515668322355874899618--99999 Q ss_pred HHHHHHHHHHCC Q ss_conf 989999997332 Q gi|254780768|r 155 LAAMKSAEALSE 166 (281) Q Consensus 155 ~~g~~i~~~l~~ 166 (281) +.-..+++.+++ T Consensus 145 ~~~~~il~~~~~ 156 (162) T d3cuma2 145 EKARPLFEAMGR 156 (162) T ss_dssp HHHHHHHHHHEE T ss_pred HHHHHHHHHHCC T ss_conf 999999999718 No 11 >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Probab=82.84 E-value=1 Score=22.26 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.0 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 9739999779803899999999789978999954 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVL 34 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~ 34 (281) |+||+|| |-|..=--+|++++++|+...+.++. T Consensus 1 Mk~I~II-G~G~mG~sla~~L~~~g~~~~I~~~D 33 (171) T d2g5ca2 1 MQNVLIV-GVGFMGGSFAKSLRRSGFKGKIYGYD 33 (171) T ss_dssp CCEEEEE-SCSHHHHHHHHHHHHTTCCSEEEEEC T ss_pred CCEEEEE-CCCHHHHHHHHHHHHCCCCEEEEEEE T ss_conf 9789999-41989999999999639970899997 No 12 >d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Probab=81.73 E-value=1.6 Score=20.94 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=90.3 Q ss_pred CEEEEEECCCCHHHHH---HHHHHHCCCCEEEEEECCCCCCCCCC--CCEE-EEEHHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 7399997798038999---99999789978999954866731038--8567-8738999999999986495406770242 Q gi|254780768|r 2 KRLLIIAGSGMLPYYV---AKAARLKNDEPVIASVLNECSFDWQD--FECR-ELPLGDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 2 ~kigIIAG~G~LP~~i---a~~~~~~g~~~~ii~l~~~~~~~~~~--~~~~-~~~ig~ig~li~~Lk~~~i~~ivmaG~V 75 (281) +||+|+...|--..++ .+.++.+|+++.++...+........ ..+. ...+.+ ......+=+++.|+. T Consensus 2 KkIail~~dgf~~~E~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~~~~~v~~d~~l~~-------~~~~~yDalivpGG~ 74 (170) T d1oi4a1 2 KKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDE-------VTPAEFDALLLPGGH 74 (170) T ss_dssp CEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGGG-------CCGGGCSEEEECCBT T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEECCCCHHH-------CCHHHCEEEEECCCH T ss_conf 8899994798379999999999997899899624789944665036717955871799-------895156299972404 Q ss_pred CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHH--HHH Q ss_conf 321000111026035789999998751048035899999999976974821122252420354334554653234--788 Q gi|254780768|r 76 DRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDV--KRD 153 (281) Q Consensus 76 ~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~--~~d 153 (281) . |. .+ ..|..+++.+..++++.+ .+.+-=.-|-+|+..|++.+++.+... ..+ T Consensus 75 ~--~~----------------~l-----~~~~~~~~~i~~~~~~~k--~i~aiC~g~~~La~~glL~g~~~T~~~~~~~~ 129 (170) T d1oi4a1 75 S--PD----------------YL-----RGDNRFVTFTRDFVNSGK--PVFAICHGPQLLISADVIRGRKLTAVKPIIID 129 (170) T ss_dssp H--HH----------------HH-----TTSHHHHHHHHHHHHTTC--CEEEETTTHHHHHHHTCCTTCEECCCGGGHHH T ss_pred H--HH----------------HH-----CCCHHHHHHHHHHHHCCC--EEEECCCCHHHHHHHHHCCCCCCCCCCHHHHH T ss_conf 6--65----------------64-----248378999998863178--14520223477765432025555567508999 Q ss_pred HHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 99899999973326722599981974889625342179999999754 Q gi|254780768|r 154 ILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCR 200 (281) Q Consensus 154 I~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~ 200 (281) + +..+..=+-|.+||.+++++.- .|...+...+..+. T Consensus 130 l-------~~~g~~~~~~~~VVdd~~liTs---~g~~~~~~fa~~~i 166 (170) T d1oi4a1 130 V-------KNAGAEFYDQEVVVDKDQLVTS---RTPDDLPAFNREAL 166 (170) T ss_dssp H-------HHTTCEECCSSCEEETTTEEEE---SSGGGHHHHHHHHH T ss_pred H-------HHCCCEEECCCEEEECCEEEEC---CCHHHHHHHHHHHH T ss_conf 9-------9679989469889999979989---98406999999999 No 13 >d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Probab=80.19 E-value=1.8 Score=20.60 Aligned_cols=77 Identities=17% Similarity=0.072 Sum_probs=42.7 Q ss_pred CCEEEEEECCCCHHHH-HHHHHHHCC-------CCEEE-EEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 9739999779803899-999999789-------97899-99548667310388567873899999999998649540677 Q gi|254780768|r 1 MKRLLIIAGSGMLPYY-VAKAARLKN-------DEPVI-ASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 1 M~kigIIAG~G~LP~~-ia~~~~~~g-------~~~~i-i~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) |++||||.|-|-..-. +.+.+.... +..++ .......+....-....+-+...+...++.|.+.|++-++| T Consensus 1 Mk~IGIIGGmgp~at~~yy~~i~~~~~~~~d~~~~~~il~s~~~~~~r~~~~~~~~~~~~~~l~~~~~~Le~~Ga~~i~i 80 (115) T d1jfla1 1 MKTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIM 80 (115) T ss_dssp CCCEEEEECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEEC T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE T ss_conf 97888846719899999999999998876489788125033687878999975242204799999999999669999997 Q ss_pred ECCCCC Q ss_conf 024232 Q gi|254780768|r 72 AGAIDR 77 (281) Q Consensus 72 aG~V~k 77 (281) +-.-.+ T Consensus 81 ~cNT~H 86 (115) T d1jfla1 81 PCNTAH 86 (115) T ss_dssp SCTGGG T ss_pred CCCHHH T ss_conf 675899 No 14 >d1jvna2 c.23.16.1 (A:-3-229) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]} Probab=80.14 E-value=1.5 Score=21.05 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=47.6 Q ss_pred CCEEEEEE-CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEE-HHHHHHHHHHHHHCCCCEEE Q ss_conf 97399997-798038999999997899789999548667310388567873-89999999999864954067 Q gi|254780768|r 1 MKRLLIIA-GSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELP-LGDFCVLRSILHQYNIGRIV 70 (281) Q Consensus 1 M~kigIIA-G~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~-ig~ig~li~~Lk~~~i~~iv 70 (281) |++|+||= |.|++.. ++++++..|.++.++. ...+..+++++...+| +|.++...+.|+..+..+.+ T Consensus 4 m~~I~IiDyg~gN~~S-v~~al~~lG~~~~ii~--~~~~~~l~~~d~IILPGvG~f~~~m~~L~~~~l~~~i 72 (232) T d1jvna2 4 MPVVHVIDVESGNLQS-LTNAIEHLGYEVQLVK--SPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPI 72 (232) T ss_dssp SCEEEEECCSCSCCHH-HHHHHHHTTCEEEEES--SGGGCCSTTCSCEEEEECSCHHHHHHHHHHTTCHHHH T ss_pred CCEEEEEECCCCHHHH-HHHHHHHCCCCEEEEE--CCCHHHHHCCCEEEECCCCCCCCHHHHHCCCCHHHHH T ss_conf 9999999789868999-9999998699769998--8427656228869980478750033420020000011 No 15 >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Probab=78.59 E-value=2 Score=20.28 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=55.4 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-------CC--CCCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 973999977980389999999978997899995486673-------10--388567873899999999998649540677 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF-------DW--QDFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-------~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) |+ +-|+.|+|-+=..+++.+.++|++++++.-...... .. .++.+...++.+...+.+.++..+++.|+- T Consensus 1 MK-iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH 79 (338) T d1udca_ 1 MR-VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338) T ss_dssp CE-EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE T ss_pred CE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE T ss_conf 97-99989887899999999997849799997888752656777886247887799901689899999874169989999 Q ss_pred ECCCC Q ss_conf 02423 Q gi|254780768|r 72 AGAID 76 (281) Q Consensus 72 aG~V~ 76 (281) ..... T Consensus 80 lAa~~ 84 (338) T d1udca_ 80 FAGLK 84 (338) T ss_dssp CCSCC T ss_pred CCCCC T ss_conf 98766 No 16 >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=75.17 E-value=2.4 Score=19.66 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=52.1 Q ss_pred CEEEEE-ECCCCHHHHHHHHHHHCCCCEEEEEECCCC-C-------------CCCCCCCEEEEEHHHHHHHHHHHHHCCC Q ss_conf 739999-779803899999999789978999954866-7-------------3103885678738999999999986495 Q gi|254780768|r 2 KRLLII-AGSGMLPYYVAKAARLKNDEPVIASVLNEC-S-------------FDWQDFECRELPLGDFCVLRSILHQYNI 66 (281) Q Consensus 2 ~kigII-AG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~-------------~~~~~~~~~~~~ig~ig~li~~Lk~~~i 66 (281) +|.+|| .|+|-+=..+++.+.++|++++.+...... + .....+.+...++.....+.+.++..++ T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339) T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339) T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC T ss_conf 99899968864899999999997849899997888555514366654223340456459997636688999999864134 Q ss_pred CEEEEECCCC Q ss_conf 4067702423 Q gi|254780768|r 67 GRIVVAGAID 76 (281) Q Consensus 67 ~~ivmaG~V~ 76 (281) +.|+-+.... T Consensus 81 D~Vih~Aa~~ 90 (339) T d1n7ha_ 81 DEVYNLAAQS 90 (339) T ss_dssp SEEEECCSCC T ss_pred CHHHHCCCCC T ss_conf 1122012213 No 17 >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Probab=74.57 E-value=2.5 Score=19.56 Aligned_cols=75 Identities=17% Similarity=0.050 Sum_probs=51.5 Q ss_pred CEEEEE-ECCCCHHHHHHHHHHHCCCCEEEEEECCCC-C----------CC---CCCCCEEEEEHHHHHHHHHHHHHCCC Q ss_conf 739999-779803899999999789978999954866-7----------31---03885678738999999999986495 Q gi|254780768|r 2 KRLLII-AGSGMLPYYVAKAARLKNDEPVIASVLNEC-S----------FD---WQDFECRELPLGDFCVLRSILHQYNI 66 (281) Q Consensus 2 ~kigII-AG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~----------~~---~~~~~~~~~~ig~ig~li~~Lk~~~i 66 (281) +||+|| .|+|-+=..+.+.+.++|++++.+...... + .. ..++.+...++.+...+...+...++ T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347) T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347) T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEEEEECCCCHHHHHHHHHCCC T ss_conf 98899904776899999999997839899998887545501278875353553247818999146780654788863565 Q ss_pred CEEEEECCCC Q ss_conf 4067702423 Q gi|254780768|r 67 GRIVVAGAID 76 (281) Q Consensus 67 ~~ivmaG~V~ 76 (281) ..++-+.... T Consensus 81 ~~v~~~~a~~ 90 (347) T d1t2aa_ 81 TEIYNLGAQS 90 (347) T ss_dssp SEEEECCSCC T ss_pred CEEEEEEECC T ss_conf 3133200013 No 18 >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=74.15 E-value=2.6 Score=19.49 Aligned_cols=164 Identities=10% Similarity=0.056 Sum_probs=92.6 Q ss_pred CCEEEEEECCCC-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE---EHHHHHHHHHHHHHC--CCCEEEEECC Q ss_conf 973999977980-3899999999789978999954866731038856787---389999999999864--9540677024 Q gi|254780768|r 1 MKRLLIIAGSGM-LPYYVAKAARLKNDEPVIASVLNECSFDWQDFECREL---PLGDFCVLRSILHQY--NIGRIVVAGA 74 (281) Q Consensus 1 M~kigIIAG~G~-LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~---~ig~ig~li~~Lk~~--~i~~ivmaG~ 74 (281) ++|.+||.|.+. +=..+++.+.+.|.+++++....+.... ...... +..++.++++...++ .++-+|-.=. T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG 82 (237) T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 82 (237) T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHCC---CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC T ss_conf 99879992788889999999999879989999799330067---538997538999999999999985698328986500 Q ss_pred CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-EEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 232100011102603578999999875104803589999999997697-4821122252420354334554653234788 Q gi|254780768|r 75 IDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGV-SVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 75 V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~-~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) +..+..+.+...+ ...+.+ ...-.+--.+.+.++..+.+++. +++-........ ..++.. ....+|... T Consensus 83 ~~~~~~~~~~~~e-----~~~~~~-~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-~~~~~~-~Y~asKaal-- 152 (237) T d1uzma1 83 LSADAFLMRMTEE-----KFEKVI-NANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-GIGNQA-NYAASKAGV-- 152 (237) T ss_dssp CCC-----CCCHH-----HHHHHH-HHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------CCH-HHHHHHHHH-- T ss_pred CCCCCCHHHCCHH-----HHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCC-CCCCCH-HHHHHHHHH-- T ss_conf 1010017658999-----999998-765410024444101001436788637871355446-775527-789999999-- Q ss_pred HHHHHHHHHHHCCCCCEEEEEEEC Q ss_conf 998999999733267225999819 Q gi|254780768|r 154 ILAAMKSAEALSELDVGQSAVSIG 177 (281) Q Consensus 154 I~~g~~i~~~l~~~DiGQsvVv~~ 177 (281) ..+...++.++++..|-=.+|.-+ T Consensus 153 ~~lt~~lA~e~~~~gIrVN~I~PG 176 (237) T d1uzma1 153 IGMARSIARELSKANVTANVVAPG 176 (237) T ss_dssp HHHHHHHHHHHGGGTEEEEEEEEC T ss_pred HHHHHHHHHHHHCCCCEEEEEEEC T ss_conf 999998776531478106355207 No 19 >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Probab=72.67 E-value=2.7 Score=19.33 Aligned_cols=73 Identities=8% Similarity=-0.049 Sum_probs=42.7 Q ss_pred CEEEEEECC---CCHHHHHHHHHHHCCCCEEEEEECCCCC------CCCC------CCCEEEEEHHHHHHHHHHHHHCCC Q ss_conf 739999779---8038999999997899789999548667------3103------885678738999999999986495 Q gi|254780768|r 2 KRLLIIAGS---GMLPYYVAKAARLKNDEPVIASVLNECS------FDWQ------DFECRELPLGDFCVLRSILHQYNI 66 (281) Q Consensus 2 ~kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~l~~~~~------~~~~------~~~~~~~~ig~ig~li~~Lk~~~i 66 (281) +.+|+|.-+ +.+-..+.+.+...|++++-+.-..... +.+. +......+=.....+++.+.+.++ T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~vp~~~~~~~l~~~~~~g~ 81 (116) T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVEAGF 81 (116) T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHHTTC T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCEEEEEEECHHHHHHHHHHHHHCCC T ss_conf 67999842699998099999999988997999813342215854556611102110379998178999999999986699 Q ss_pred CEEEEECC Q ss_conf 40677024 Q gi|254780768|r 67 GRIVVAGA 74 (281) Q Consensus 67 ~~ivmaG~ 74 (281) +.+.|-+. T Consensus 82 k~v~~~~g 89 (116) T d1y81a1 82 KKLWFQPG 89 (116) T ss_dssp CEEEECTT T ss_pred CEEEECCC T ss_conf 65885065 No 20 >d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} Probab=72.57 E-value=2.6 Score=19.48 Aligned_cols=152 Identities=17% Similarity=0.141 Sum_probs=77.9 Q ss_pred CCEEEEEECCC-----CHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCEEEE----EH----HHHHHHHHHHHHCCC Q ss_conf 97399997798-----038999999997-89978999954866731038856787----38----999999999986495 Q gi|254780768|r 1 MKRLLIIAGSG-----MLPYYVAKAARL-KNDEPVIASVLNECSFDWQDFECREL----PL----GDFCVLRSILHQYNI 66 (281) Q Consensus 1 M~kigIIAG~G-----~LP~~ia~~~~~-~g~~~~ii~l~~~~~~~~~~~~~~~~----~i----g~ig~li~~Lk~~~i 66 (281) |+|+.||-++. .+...|++.++. .|.++.+..+..-...++.+++-..+ .. +++...++.+...-- T Consensus 1 M~kilivy~S~~G~T~~~A~~ia~g~~~~~g~~v~~~~~~~~~~~dl~~~d~iiiGsPty~g~~~~~~~~fld~~~~~~~ 80 (184) T d2arka1 1 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLW 80 (184) T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHTGGGTT T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 98699999899838999999999855334695699940234452205328678982574023447999999998778877 Q ss_pred CEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHC-CCCC-CCCCC Q ss_conf 406770242321000111026035789999998751048035899999999976974821122252420-3543-34554 Q gi|254780768|r 67 GRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELL-VQVG-SLGTC 144 (281) Q Consensus 67 ~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll-~~~G-~l~~~ 144 (281) .+ +.|++- -.|. .......|+...+..+...+...|+.+++..+...... .+.| ...+. T Consensus 81 ~~--l~gK~~--a~f~---------------s~g~~~gG~e~al~~~~~~l~~~G~~vvg~~~~~~~~~~~~~g~~~~~~ 141 (184) T d2arka1 81 GE--IDGKIA--CAFS---------------SSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGKKFTLHYGAVVAGE 141 (184) T ss_dssp TS--CTTCEE--EEEE---------------EESSBTSSHHHHHHHHHHHHHHTTCEECCEEEEEETTEEESSSEEEESS T ss_pred HH--HCCEEE--EEEE---------------CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC T ss_conf 87--589699--9998---------------1688884289999986167640887796246445656678777514899 Q ss_pred CCCHHHHHHH-HHHHHHHHHHCCCCCEE Q ss_conf 6532347889-98999999733267225 Q gi|254780768|r 145 VPNRDVKRDI-LAAMKSAEALSELDVGQ 171 (281) Q Consensus 145 ~p~~~~~~dI-~~g~~i~~~l~~~DiGQ 171 (281) .|++++.+.. .+|.++++....+--|+ T Consensus 142 ~~~~~dl~~a~~lGk~lAe~~~~l~~gr 169 (184) T d2arka1 142 PRSEEEKEACRRLGRRLAEWVAIFVDGR 169 (184) T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHTSCC T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9499999999999999999999999755 No 21 >d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Probab=70.75 E-value=2.8 Score=19.21 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=34.4 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 39999779803899999999789978999954866731038856787389999999999864 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQY 64 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~ 64 (281) |||||+-.|++ ..+++++++.|.++.++.-. .++.+++...++=|......+.+++. T Consensus 8 kIgii~~~Gn~-~s~~~al~~~G~~~~~v~~~----~~l~~~D~lIlPGG~~~~~~~~l~~~ 64 (202) T d1q7ra_ 8 KIGVLGLQGAV-REHVRAIEACGAEAVIVKKS----EQLEGLDGLVLPGGESTTMRRLIDRY 64 (202) T ss_dssp EEEEESCGGGC-HHHHHHHHHTTCEEEEECSG----GGGTTCSEEEECCCCHHHHHHHHHHT T ss_pred EEEEEECCCCH-HHHHHHHHHCCCCEEEECCH----HHHHCCCEEEECCCCCHHHHHHHHHH T ss_conf 79999789989-99999999879929998998----99712898998798847999876666 No 22 >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=70.70 E-value=3.1 Score=18.97 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=44.0 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 3999977980389999999978997899995486673--103885678738999999999986495406770242 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF--DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~--~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V 75 (281) ||-|..|+|-+=..+++.+.++|++++++........ ......+...++.+...+++.++ +++.|+-+... T Consensus 17 KILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a~~ 89 (363) T d2c5aa1 17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAAD 89 (363) T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCC T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHH--CCCEEEECCCC T ss_conf 79997888789999999999782989999689852113423567279935155898998761--48767310233 No 23 >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=70.57 E-value=2.4 Score=19.65 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=26.5 Q ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 997798038999999997899789999548 Q gi|254780768|r 6 IIAGSGMLPYYVAKAARLKNDEPVIASVLN 35 (281) Q Consensus 6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~ 35 (281) +|.|.|.+-..+++.+...|++++++.... T Consensus 4 vI~G~G~~G~~la~~L~~~g~~v~vid~d~ 33 (132) T d1lssa_ 4 IIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 33 (132) T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEEESCH T ss_pred EEECCCHHHHHHHHHHHHCCCCCCEECCCH T ss_conf 998988999999999997799720021784 No 24 >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Probab=70.46 E-value=2.8 Score=19.24 Aligned_cols=60 Identities=18% Similarity=0.235 Sum_probs=38.4 Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC----CC--CCCCEEEEEHHHHHHHHHHHHHCCCCE Q ss_conf 99977980389999999978997899995486673----10--388567873899999999998649540 Q gi|254780768|r 5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF----DW--QDFECRELPLGDFCVLRSILHQYNIGR 68 (281) Q Consensus 5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~----~~--~~~~~~~~~ig~ig~li~~Lk~~~i~~ 68 (281) -||+|+|.+-..+++.+...|++++++....+... .. ..+.+.+-+..+ -..|++.++.+ T Consensus 6 iII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d----~~~L~~a~i~~ 71 (153) T d1id1a_ 6 FIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND----SSVLKKAGIDR 71 (153) T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS----HHHHHHHTTTT T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCC----HHHHHHHCCCC T ss_conf 9998988899999999997699879995330558999998533996899906864----67797735402 No 25 >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=70.25 E-value=2.3 Score=19.83 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=29.0 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 739999779803899999999789978999954 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVL 34 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~ 34 (281) =|+++|-|.|.+=..+|+.+.++|+++++.... T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~ 33 (212) T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212) T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC T ss_conf 979999488399999999999879989999799 No 26 >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Probab=69.88 E-value=2.9 Score=19.18 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=26.7 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 39999779803899999999789978999954 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVL 34 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~ 34 (281) |||+| |.|..=.-+|+.+.++|++++..... T Consensus 2 kI~iI-G~G~mG~~lA~~l~~~g~~V~~~d~~ 32 (165) T d2f1ka2 2 KIGVV-GLGLIGASLAGDLRRRGHYLIGVSRQ 32 (165) T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCEEEEECSC T ss_pred EEEEE-EECHHHHHHHHHHHHCCCEEEEEECC T ss_conf 99999-10498999999999789989999898 No 27 >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Probab=68.41 E-value=3.4 Score=18.65 Aligned_cols=76 Identities=14% Similarity=0.258 Sum_probs=53.3 Q ss_pred CC-EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC------C---------CCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 97-39999779803899999999789978999954866------7---------31038856787389999999999864 Q gi|254780768|r 1 MK-RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC------S---------FDWQDFECRELPLGDFCVLRSILHQY 64 (281) Q Consensus 1 M~-kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~------~---------~~~~~~~~~~~~ig~ig~li~~Lk~~ 64 (281) |. ||-|..|+|-+=..+++.+.++|++++.+.-.... . ....+..+...++.....+.+.++.. T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346) T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346) T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC T ss_conf 99729997897389999999999786979999778742134432067888888733787179995644640122221233 Q ss_pred CCCEEEEECCCC Q ss_conf 954067702423 Q gi|254780768|r 65 NIGRIVVAGAID 76 (281) Q Consensus 65 ~i~~ivmaG~V~ 76 (281) .+..++-+..+. T Consensus 81 ~~~~i~h~Aa~~ 92 (346) T d1ek6a_ 81 SFMAVIHFAGLK 92 (346) T ss_dssp CEEEEEECCSCC T ss_pred CCCCCCCCCCCC T ss_conf 423320003136 No 28 >d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Probab=67.73 E-value=0.94 Score=22.43 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=20.6 Q ss_pred CCEEEEE-ECCCCHHHHHHHHHHHCCCCEEEE Q ss_conf 9739999-779803899999999789978999 Q gi|254780768|r 1 MKRLLII-AGSGMLPYYVAKAARLKNDEPVIA 31 (281) Q Consensus 1 M~kigII-AG~G~LP~~ia~~~~~~g~~~~ii 31 (281) |+ |||| -|.|++ ..+.++++..|..+..+ T Consensus 1 MK-I~IiDyg~gN~-~si~~al~~~g~~~~~~ 30 (200) T d1k9vf_ 1 MR-IGIISVGPGNI-MNLYRGVKRASENFEDV 30 (200) T ss_dssp CE-EEEECSSSSCC-HHHHHHHHHHTTTSSSC T ss_pred CE-EEEEECCCCHH-HHHHHHHHHHCCCCCCC T ss_conf 98-99990798689-99999999853004511 No 29 >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Probab=66.39 E-value=2.4 Score=19.65 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=29.5 Q ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC Q ss_conf 99779803899999999789978999954866731038 Q gi|254780768|r 6 IIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQD 43 (281) Q Consensus 6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~ 43 (281) +|.|.|.+=..+++.+.+.|++++++....+......+ T Consensus 4 iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~ 41 (134) T d2hmva1 4 AVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS 41 (134) T ss_dssp EEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH T ss_conf 99898899999999999879918994370888899997 No 30 >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=64.49 E-value=4.1 Score=18.15 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=50.4 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECC-CCCCC--CCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 97399997798038999999997899789999548-66731--0388567873899999999998649540677024 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLN-ECSFD--WQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~-~~~~~--~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) |.|+-|..|+|.+=..+++.+.++|+++.++.+.- ..... .....+....+.....+.+.++ +|+.++-+.. T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~ 77 (252) T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTS 77 (252) T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCC--CCEEEEEEEE T ss_conf 88899989865899999999997799379999727877887555782899853012332323212--1002589985 No 31 >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Probab=64.43 E-value=4.1 Score=18.14 Aligned_cols=75 Identities=20% Similarity=0.131 Sum_probs=46.3 Q ss_pred CEEEEEEC-CCCHHHHHHHHHHHCCCCEEEEEECCCC-C----------C--CCCCCCEEEEEHHHHHHHHHHHHHCCCC Q ss_conf 73999977-9803899999999789978999954866-7----------3--1038856787389999999999864954 Q gi|254780768|r 2 KRLLIIAG-SGMLPYYVAKAARLKNDEPVIASVLNEC-S----------F--DWQDFECRELPLGDFCVLRSILHQYNIG 67 (281) Q Consensus 2 ~kigIIAG-~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~----------~--~~~~~~~~~~~ig~ig~li~~Lk~~~i~ 67 (281) .|++||-| +|-+=..+++.+.++|++++.+.-.... + . ..+++.....++.+...+.+.++..+.+ T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357) T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357) T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC T ss_conf 98899968886899999999997869899997897555556688887403303897599982067979988887525987 Q ss_pred EEEEECCCC Q ss_conf 067702423 Q gi|254780768|r 68 RIVVAGAID 76 (281) Q Consensus 68 ~ivmaG~V~ 76 (281) .|+-+-... T Consensus 81 ~v~h~aa~~ 89 (357) T d1db3a_ 81 EVYNLGAMS 89 (357) T ss_dssp EEEECCCCC T ss_pred EEEEEECCC T ss_conf 899852035 No 32 >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Probab=64.13 E-value=4.1 Score=18.11 Aligned_cols=75 Identities=9% Similarity=0.020 Sum_probs=56.5 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 7399997798038999999997899789999548667310-------388567873899999999998649540677024 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW-------QDFECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-------~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) +|+=|..|+|-+=..+++.+.++|++++.+.........+ +.++....++.+...+.+.++...+..++-+.. T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa 88 (356) T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA 88 (356) T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHC T ss_conf 98999788877999999999977998999978998617777664014687699840568576002343020244444421 Q ss_pred CC Q ss_conf 23 Q gi|254780768|r 75 ID 76 (281) Q Consensus 75 V~ 76 (281) .. T Consensus 89 ~~ 90 (356) T d1rkxa_ 89 QP 90 (356) T ss_dssp CC T ss_pred CC T ss_conf 56 No 33 >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} Probab=63.16 E-value=4.1 Score=18.11 Aligned_cols=30 Identities=10% Similarity=-0.009 Sum_probs=14.7 Q ss_pred EEEEEECC---CCHHHHHHHHHHHCCCCEEEEE Q ss_conf 39999779---8038999999997899789999 Q gi|254780768|r 3 RLLIIAGS---GMLPYYVAKAARLKNDEPVIAS 32 (281) Q Consensus 3 kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~ 32 (281) ++|+|.-+ +.+...+++.+...|++++.+. T Consensus 21 sIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn 53 (139) T d2d59a1 21 KIALVGASPKPERDANIVMKYLLEHGYDVYPVN 53 (139) T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC T ss_pred EEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEC T ss_conf 699991059999825999999997899799989 No 34 >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Probab=61.35 E-value=4.6 Score=17.78 Aligned_cols=28 Identities=7% Similarity=0.050 Sum_probs=20.7 Q ss_pred EEHHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 7389999999999864954067702423 Q gi|254780768|r 49 LPLGDFCVLRSILHQYNIGRIVVAGAID 76 (281) Q Consensus 49 ~~ig~ig~li~~Lk~~~i~~ivmaG~V~ 76 (281) .+-....+.++.+|+.|+.-|=+-+..+ T Consensus 36 ~~~~~~~~~l~~~k~~G~N~iR~~~~~~ 63 (339) T d2vzsa5 36 WNETAAADKLKYVLNLGLNTVRLEGHIE 63 (339) T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEESCCC T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 9999999999999976998999558889 No 35 >d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Probab=60.82 E-value=4.7 Score=17.72 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=26.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE Q ss_conf 97399997798038999999997899789999 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIAS 32 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~ 32 (281) |.|||+|.=.|++.- ..++++..|.++.++. T Consensus 1 m~~igv~~~~G~~~~-~~~al~~~G~~~~~i~ 31 (195) T d2nv0a1 1 MLTIGVLGLQGAVRE-HIHAIEACGAAGLVVK 31 (195) T ss_dssp CCEEEEECSSSCCHH-HHHHHHHTTCEEEEEC T ss_pred CCEEEEEECCCHHHH-HHHHHHHCCCCEEEEC T ss_conf 929999962882999-9999998799199989 No 36 >d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]} Probab=59.12 E-value=5 Score=17.53 Aligned_cols=155 Identities=20% Similarity=0.158 Sum_probs=89.4 Q ss_pred HHHHHHHHHHHHCCCEEECHHHCCHHHCCC----CCCCCCCCCCHHH--HHHHHHHHHHHHHHCCCCCEEEEEEECCEEE Q ss_conf 589999999997697482112225242035----4334554653234--7889989999997332672259998197488 Q gi|254780768|r 108 AILKASIDLLESYGVSVVGAHEIVPELLVQ----VGSLGTCVPNRDV--KRDILAAMKSAEALSELDVGQSAVSIGGRVV 181 (281) Q Consensus 108 ~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~----~G~l~~~~p~~~~--~~dI~~g~~i~~~l~~~DiGQsvVv~~g~Vi 181 (281) .++..+.+.+++.|+++...+ ++++.. .|-+|.+-|+-.. ...+..++.++..+| ++.+|+-.|+- T Consensus 68 ~~~~~~k~~l~~tGl~~~~~t---~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLG----a~~~v~W~G~~- 139 (392) T d1xima_ 68 GIIAGFKKALDETGLIVPMVT---TNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELG----AKTLVLWGGRE- 139 (392) T ss_dssp HHHHHHHHHHHHHTCBCCEEE---CCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT----CCEEEEECTTS- T ss_pred HHHHHHHHHHHHCCCEEEEEE---CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC----CCEEEECCCCC- T ss_conf 999999999986398234663---3424471431588779399999999999999999999958----98379637877- Q ss_pred EEECCCCHH--HHHHHHHHHHHHCCCCC---CCCEEEEEECCCCCCCE-EEECCCCHHHHHHHHHCCC---EEEEEECCC Q ss_conf 962534217--99999997543123456---67718999348887531-2106627999999998499---099997397 Q gi|254780768|r 182 ALEGIEGTD--SMLQRIVDCRNNGRILA---GKSGVLVKMCKSQQDMR-ADLPSIGAKTVQNVIKAGL---AGIALEAGK 252 (281) Q Consensus 182 aiEa~eGTD--~mi~R~~~~~~~~~~~~---~~~~ilvK~~K~~QD~r-~DlP~IG~~Ti~~~~~ag~---~giaiea~~ 252 (281) +-|-...|| .+.+|..+..+.....+ +.+..+.==|||+.-+. .-+|++|. ++..+.+.+. -|+.++.+. T Consensus 140 G~~~~~~~d~~~~~~~~~e~l~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~-al~~i~~vg~p~~vgvnlD~gH 218 (392) T d1xima_ 140 GAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGH-AIAFVQELERPELFGINPETGH 218 (392) T ss_dssp EESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHH-HHHHHTTSSSGGGEEECCBHHH T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHH-HHHHHHHCCCCCCEEEECCHHH T ss_conf 667876558999999999999999998875088855986037788875434077999-9999997199003667411324 Q ss_pred EEEE--CHHHHHHHHHHC-CCE Q ss_conf 7998--589999999987-968 Q gi|254780768|r 253 SLVL--EKELVKKHADEA-GIF 271 (281) Q Consensus 253 ~lil--d~~~~i~~a~~~-~i~ 271 (281) ..+. +.+..++.|-.+ .|+ T Consensus 219 ~~~ag~~~~~~ia~a~~~gkL~ 240 (392) T d1xima_ 219 EQMSNLNFTQGIAQALWHKKLF 240 (392) T ss_dssp HHTTTCCHHHHHHHHHHHTCBC T ss_pred HHHCCCCHHHHHHHHHHCCCEE T ss_conf 5433798579999998659789 No 37 >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Probab=57.70 E-value=5.3 Score=17.37 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=51.8 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC-CC------CC---CCCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 739999779803899999999789978999954866-73------10---388567873899999999998649540677 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC-SF------DW---QDFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~-~~------~~---~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) =|+=|..|+|-+=..+++.+.++|+++++ .+.... .. .+ +++++...++.+...+.+.++..+++.|+- T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361) T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVV-NIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361) T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEE-EEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEE-EEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEE T ss_conf 97999888767999999999977997899-98479864427778765316884799865789899999997579999998 Q ss_pred ECCCC Q ss_conf 02423 Q gi|254780768|r 72 AGAID 76 (281) Q Consensus 72 aG~V~ 76 (281) ++... T Consensus 80 lAa~~ 84 (361) T d1kewa_ 80 LAAES 84 (361) T ss_dssp CCSCC T ss_pred CCCCC T ss_conf 96016 No 38 >d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Probab=57.62 E-value=2.1 Score=20.06 Aligned_cols=161 Identities=17% Similarity=0.114 Sum_probs=82.9 Q ss_pred CCEEEEEECCCCHH---HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCEE-EEEHHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 97399997798038---999999997-899789999548667310388567-8738999999999986495406770242 Q gi|254780768|r 1 MKRLLIIAGSGMLP---YYVAKAARL-KNDEPVIASVLNECSFDWQDFECR-ELPLGDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 1 M~kigIIAG~G~LP---~~ia~~~~~-~g~~~~ii~l~~~~~~~~~~~~~~-~~~ig~ig~li~~Lk~~~i~~ivmaG~V 75 (281) |+|++++.-.|-=. ..+...++. .|.++.++...+............ ...+ +.+.....+-+++.|+. T Consensus 1 M~kv~vll~~gf~~~E~~~~~~~l~~~~g~~v~~vs~~~~~V~s~~G~~v~~d~~l-------~~~~~~~~D~liipGG~ 73 (188) T d2fexa1 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSY-------DALDPVDIDALVIPGGL 73 (188) T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEG-------GGCCTTTCSEEEECCBS T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEECCCH-------HHCCHHHCCEEEECCCC T ss_conf 97899996798529999999999754189689999579996784899989616765-------88893033589964776 Q ss_pred CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH Q ss_conf 32100011102603578999999875104803589999999997697482112225242035433455465323478899 Q gi|254780768|r 76 DRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL 155 (281) Q Consensus 76 ~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~ 155 (281) . +.. . .+..++. +++.+.++|- .+.+----+-+|+..|++.+++-+.+.+..-. T Consensus 74 ~--~~~-~---------------------~~~~l~~-~lr~~~~~~~-~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~ 127 (188) T d2fexa1 74 S--WEK-G---------------------TAADLGG-LVKRFRDRDR-LVAGICAAASALGGTGVLNDVAHTGNALASHK 127 (188) T ss_dssp H--HHH-T---------------------CCCCCHH-HHHHHHHTTC-EEEEETHHHHHHHHTTTTTTSCBCCSCHHHHH T ss_pred C--CCC-C---------------------CCHHHHH-HHHHHHHHCC-EEEEECCHHHHHHHCCCCCCCEEECCCHHHHH T ss_conf 6--433-4---------------------4199999-9999997399-79974502678987476589477446127655 Q ss_pred HHHHHHHHHC--CCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHH Q ss_conf 8999999733--2672259998197488962534217999999975431 Q gi|254780768|r 156 AAMKSAEALS--ELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCRNN 202 (281) Q Consensus 156 ~g~~i~~~l~--~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~~~ 202 (281) . ...+. ..=+-|..||.+|.++.- .||.+ +.-+-.+.+. T Consensus 128 ~----~~~~~~~~~~~~~~~vV~DgnliTs---~G~aa-~d~al~ii~~ 168 (188) T d2fexa1 128 A----YPAYRGEAHYRDQPRAVSDGGVVTA---AGSAP-VSFAVEILKS 168 (188) T ss_dssp T----STTCCCGGGBCCCSSCEEETTEEEE---CTTCH-HHHHHHHHHH T ss_pred H----HHHCCCCCEEEECCEEEECCCEEEC---CCCHH-HHHHHHHHHH T ss_conf 4----5640787449847779977998999---97069-9999999998 No 39 >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Probab=57.58 E-value=4.3 Score=17.95 Aligned_cols=230 Identities=15% Similarity=0.084 Sum_probs=111.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCC Q ss_conf 97399997798038999999997899789999548667310388567873899999999998649540677024232100 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPN 80 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~ 80 (281) |+ |-|..|+|-+=..+++.+..+|++++.+.... .+ +.....+-++++..+++.|+-+.... .+. T Consensus 2 MK-IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---~D----------~~d~~~~~~~l~~~~~d~vih~a~~~-~~~ 66 (281) T d1vl0a_ 2 MK-ILITGANGQLGREIQKQLKGKNVEVIPTDVQD---LD----------ITNVLAVNKFFNEKKPNVVINCAAHT-AVD 66 (281) T ss_dssp EE-EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---CC----------TTCHHHHHHHHHHHCCSEEEECCCCC-CHH T ss_pred CE-EEEECCCCHHHHHHHHHHHHCCCEEEEEECHH---CC----------CCCHHHHHHHHHHCCCCEEEEECCCC-CCC T ss_conf 87-99979998899999999986889899920412---56----------78999999999873997997402223-321 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC--EEECHHHCCHHHCC-CCCCCCCCCCCHHHHHHHHHH Q ss_conf 011102603578999999875104803589999999997697--48211222524203-543345546532347889989 Q gi|254780768|r 81 VQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGV--SVVGAHEIVPELLV-QVGSLGTCVPNRDVKRDILAA 157 (281) Q Consensus 81 ~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~--~vi~~~~~l~~ll~-~~G~l~~~~p~~~~~~dI~~g 157 (281) .....++. .. .. .-.....+.......+. ...+...+..+-.. +........|...--..-..+ T Consensus 67 ~~~~~~~~-----~~----~~----n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~ 133 (281) T d1vl0a_ 67 KCEEQYDL-----AY----KI----NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEG 133 (281) T ss_dssp HHHHCHHH-----HH----HH----HTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHH T ss_pred CCCCCCHH-----HC----CC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH T ss_conf 12346200-----00----32----3123222211000013222234442254114444553252000102344322489 Q ss_pred HHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHH Q ss_conf 99999733267225999819748896253421799999997543123456677189993488875312106627999999 Q gi|254780768|r 158 MKSAEALSELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADLPSIGAKTVQN 237 (281) Q Consensus 158 ~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~~~~~~~~~~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~ 237 (281) ...+++.+. +.++++-+.|.+-.. .....++.++.. +..+.+- .+|-+-+..-.-=.+.+.. T Consensus 134 e~~~~~~~~----~~~i~R~~~vyG~~~-~~~~~~~~~~~~----------~~~~~~~---~~~~~~~i~v~D~~~~~~~ 195 (281) T d1vl0a_ 134 ENFVKALNP----KYYIVRTAWLYGDGN-NFVKTMINLGKT----------HDELKVV---HDQVGTPTSTVDLARVVLK 195 (281) T ss_dssp HHHHHHHCS----SEEEEEECSEESSSS-CHHHHHHHHHHH----------CSEEEEE---SSCEECCEEHHHHHHHHHH T ss_pred HHHHHHHCC----CCCCCCEEEEECCCC-CCCCCHHHHHCC----------CCCEEEC---CCCEECCCHHHHHHHHHHH T ss_conf 999998688----755543257857986-666220001104----------8742602---7743022022256666654 Q ss_pred HHHCCCEEEEEECCCEEEECHHHHHHHHHHCCC--EEEEEC Q ss_conf 998499099997397799858999999998796--899957 Q gi|254780768|r 238 VIKAGLAGIALEAGKSLVLEKELVKKHADEAGI--FVCGID 276 (281) Q Consensus 238 ~~~ag~~giaiea~~~lild~~~~i~~a~~~~i--~i~g~~ 276 (281) +.+....|+.--++.-.+--.|-+...++..|. .+.-+. T Consensus 196 ~~~~~~~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~ 236 (281) T d1vl0a_ 196 VIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCT 236 (281) T ss_dssp HHHHTCCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEEC T ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECC T ss_conf 43312568616727996516789999999849985387614 No 40 >d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Probab=54.80 E-value=5.2 Score=17.40 Aligned_cols=67 Identities=10% Similarity=0.009 Sum_probs=42.9 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC--CCEEEE------EHHHHHHHHHHHHHCCCC Q ss_conf 9739999779803899999999789978999954866731038--856787------389999999999864954 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQD--FECREL------PLGDFCVLRSILHQYNIG 67 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~--~~~~~~------~ig~ig~li~~Lk~~~i~ 67 (281) |=|==|||-.|.-...+++.|+..|++++.+.-....+...-. .+...+ +.-.+..++...++.+|+ T Consensus 1 m~kkvLIANRGEiA~Ri~ra~~elgi~tvav~s~~D~~s~~~~~ad~~~~ig~~~~~sYln~~~Ii~~A~~~~~d 75 (114) T d1ulza2 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTDPLDTYLNKQRIINLALEVGAD 75 (114) T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSSTTHHHHCHHHHHHHHHHTTCC T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHCCEEEECCCCHHHHHHCHHHHHHHHHHHCCC T ss_conf 974046756889999999999996297578735512117436545500465898355252679999999996997 No 41 >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Probab=53.21 E-value=6.2 Score=16.89 Aligned_cols=62 Identities=13% Similarity=0.020 Sum_probs=43.9 Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCCC--CC-CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 03899999999789978999954866--73-10388567873899999999998649540677024 Q gi|254780768|r 12 MLPYYVAKAARLKNDEPVIASVLNEC--SF-DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 12 ~LP~~ia~~~~~~g~~~~ii~l~~~~--~~-~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) ..-..+++.+..+|+.++....+|+. +. ....+... .-..++...++.++.++++++.++|. T Consensus 46 ~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~-~~~~dl~~vi~~l~~~~~~~i~lvG~ 110 (302) T d1thta_ 46 DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT-TGKNSLCTVYHWLQTKGTQNIGLIAA 110 (302) T ss_dssp GGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHH-HHHHHHHHHHHHHHHTTCCCEEEEEE T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCCCCEEEEEEE T ss_conf 799999999997899899956789887888865678788-99989999997630357761689997 No 42 >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Probab=53.17 E-value=6.3 Score=16.89 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=25.9 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 3999977980389999999978997899995 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) |||+| |.|++-..+++.+.++|+++++..- T Consensus 2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r 31 (152) T d2ahra2 2 KIGII-GVGKMASAIIKGLKQTPHELIISGS 31 (152) T ss_dssp EEEEE-CCSHHHHHHHHHHTTSSCEEEEECS T ss_pred EEEEE-ECCHHHHHHHHHHHHCCCEEEEECC T ss_conf 89999-0439999999999858981899827 No 43 >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Probab=52.93 E-value=2.4 Score=19.71 Aligned_cols=75 Identities=15% Similarity=0.072 Sum_probs=47.6 Q ss_pred CEEEEEECC---CCHHHHHHHHHHHCC-CCEEEEEECCCCC------CCCC------CCCEEEEEHHHHHHHHHHHHHCC Q ss_conf 739999779---803899999999789-9789999548667------3103------88567873899999999998649 Q gi|254780768|r 2 KRLLIIAGS---GMLPYYVAKAARLKN-DEPVIASVLNECS------FDWQ------DFECRELPLGDFCVLRSILHQYN 65 (281) Q Consensus 2 ~kigIIAG~---G~LP~~ia~~~~~~g-~~~~ii~l~~~~~------~~~~------~~~~~~~~ig~ig~li~~Lk~~~ 65 (281) +.+|+|..+ +.+-..+.++++..+ ++++.+.-..... +.+. |......+-...-.+++.+.+.+ T Consensus 9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~vp~~~~~~~~~~~~~~g 88 (129) T d2csua1 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKG 88 (129) T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHHT T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHHHHCC T ss_conf 85999834799987089999999974997089962676230884866535335778866788448677088899999739 Q ss_pred CCEEE-EECCCC Q ss_conf 54067-702423 Q gi|254780768|r 66 IGRIV-VAGAID 76 (281) Q Consensus 66 i~~iv-maG~V~ 76 (281) ++.++ +.+.+. T Consensus 89 ~~~~vi~s~Gf~ 100 (129) T d2csua1 89 VKGVVIITAGFG 100 (129) T ss_dssp CCEEEECCCSST T ss_pred CCEEEEECCCCC T ss_conf 988987133546 No 44 >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Probab=52.82 E-value=6.3 Score=16.85 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=24.5 Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEE Q ss_conf 9997798038999999997899789999 Q gi|254780768|r 5 LIIAGSGMLPYYVAKAARLKNDEPVIAS 32 (281) Q Consensus 5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~ 32 (281) -||.|+|-==..+|..|.++|+++.++- T Consensus 7 viIVGsG~aG~v~A~~La~~G~kVlvLE 34 (379) T d2f5va1 7 VVIVGSGPIGCTYARELVGAGYKVAMFD 34 (379) T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEE T ss_conf 8998968899999999965889399993 No 45 >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Probab=51.45 E-value=6.6 Score=16.71 Aligned_cols=82 Identities=5% Similarity=0.053 Sum_probs=51.7 Q ss_pred CEEEEEECCCC-HHHHHHHHHHHCCCCEEEEEECCCCCCC----C-C--CCCE--EEEE---HHHHHHHHHHHHHC--CC Q ss_conf 73999977980-3899999999789978999954866731----0-3--8856--7873---89999999999864--95 Q gi|254780768|r 2 KRLLIIAGSGM-LPYYVAKAARLKNDEPVIASVLNECSFD----W-Q--DFEC--RELP---LGDFCVLRSILHQY--NI 66 (281) Q Consensus 2 ~kigIIAG~G~-LP~~ia~~~~~~g~~~~ii~l~~~~~~~----~-~--~~~~--~~~~---ig~ig~li~~Lk~~--~i 66 (281) +|.+||.|.+. +=..+++.+.+.|.+++++........+ + + ..++ ...+ -.++.++++...++ .+ T Consensus 9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (260) T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 88 (260) T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC T ss_conf 99799928888899999999998799899997987889999999999719946999844899999999999999982997 Q ss_pred CEEEEECCCCCCCCHHH Q ss_conf 40677024232100011 Q gi|254780768|r 67 GRIVVAGAIDRRPNVQD 83 (281) Q Consensus 67 ~~ivmaG~V~krP~~~~ 83 (281) +-+|-.-.+..+-.+.+ T Consensus 89 DilVnnAg~~~~~~~~~ 105 (260) T d1h5qa_ 89 SGLIANAGVSVVKPATE 105 (260) T ss_dssp EEEEECCCCCCCSCGGG T ss_pred CEECCCCCCCCCCCHHH T ss_conf 67614433334677787 No 46 >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Probab=50.88 E-value=6.8 Score=16.65 Aligned_cols=148 Identities=12% Similarity=0.076 Sum_probs=75.3 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CC-----CCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 97399997798038999999997899789999548667310-38-----8567873899999999998649540677024 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDW-QD-----FECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-~~-----~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) | |||+| |-|..=.-+|+.+.++|+++++.....+....+ +. .....-...+...++..+..... ..+++. T Consensus 2 M-kIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 77 (178) T d1pgja2 2 M-DVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRK-ALILVQ- 77 (178) T ss_dssp B-SEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCE-EEECCC- T ss_pred C-EEEEE-EEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE-EEEEEC- T ss_conf 8-99999-1619899999999978995999979989999999828962002112455434678875256607-999605- Q ss_pred CCCCCCHHHHCCCHHHHHHHHHHHHHHHCC---------CCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCC Q ss_conf 232100011102603578999999875104---------80358999999999769748211222524203543345546 Q gi|254780768|r 75 IDRRPNVQDLCFSIKDSLRISKMIWQLVSG---------GNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCV 145 (281) Q Consensus 75 V~krP~~~~l~~D~~~~~~l~k~l~~~~~~---------gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~ 145 (281) . ...... .+.... ..... .+-..-+.+.+.+.+.|+..+++.-.-...-+..|. +- - T Consensus 78 -~-~~~~~~---------~~~~~~-~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g~~~~a~~g~-~~-m 143 (178) T d1pgja2 78 -A-GAATDS---------TIEQLK-KVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AF-F 143 (178) T ss_dssp -C-SHHHHH---------HHHHHH-HHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EE-E T ss_pred -C-CCHHHH---------HHHHHH-HHCCCCCEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCHHCCCC-EE-E T ss_conf -7-532332---------223035-43245615305675435689999999860360475024568831311885-78-8 Q ss_pred CCHHHHHHHHHHHHHHHHHCCC Q ss_conf 5323478899899999973326 Q gi|254780768|r 146 PNRDVKRDILAAMKSAEALSEL 167 (281) Q Consensus 146 p~~~~~~dI~~g~~i~~~l~~~ 167 (281) .. -+.++.++...+++.+++- T Consensus 144 vg-G~~~~~~~v~pil~~~~~~ 164 (178) T d1pgja2 144 PG-GTLSVWEEIRPIVEAAAAK 164 (178) T ss_dssp EE-ECHHHHHHHHHHHHHHSCB T ss_pred EE-CCHHHHHHHHHHHHHHHCC T ss_conf 50-8999999999999998454 No 47 >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} Probab=50.26 E-value=2.9 Score=19.13 Aligned_cols=31 Identities=10% Similarity=0.125 Sum_probs=15.6 Q ss_pred EEEEEECC---CCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 39999779---80389999999978997899995 Q gi|254780768|r 3 RLLIIAGS---GMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 3 kigIIAG~---G~LP~~ia~~~~~~g~~~~ii~l 33 (281) .+|+|.-+ +..-..+++.++..|++.+.+.. T Consensus 15 sIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~ 48 (136) T d1iuka_ 15 TIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP 48 (136) T ss_dssp EEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG T ss_pred EEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEE T ss_conf 6999964699997368999999638997148873 No 48 >d2d1pb1 c.114.1.1 (B:1-119) tRNA 2-thiouridine synthesizing protein C, TusC {Escherichia coli [TaxId: 562]} Probab=49.33 E-value=5.6 Score=17.19 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=48.5 Q ss_pred CCEEEEEECCCCH-------HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 9739999779803-------899999999789978999954866731038856787389999999999864954067702 Q gi|254780768|r 1 MKRLLIIAGSGML-------PYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG 73 (281) Q Consensus 1 M~kigIIAG~G~L-------P~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG 73 (281) |+|+.+|.-++-+ ...+|..+...|+++.++...+....-.++..........+.+.++.|...++.++.-++ T Consensus 1 Mkkv~ii~~~~P~~~~~~~~al~~Ala~a~~~~~V~iff~~dGV~~l~~~~~p~~~~~~~l~~~~~~l~~~~~~~i~vc~ 80 (119) T d2d1pb1 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCA 80 (119) T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGCTTCCGGGGTCCCCGGGGHHHHHTTCCCEEEEH T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEH T ss_conf 96799997589998678999999999998479977999943389987237886434578889999999867996699728 Q ss_pred CC Q ss_conf 42 Q gi|254780768|r 74 AI 75 (281) Q Consensus 74 ~V 75 (281) .- T Consensus 81 ~s 82 (119) T d2d1pb1 81 AS 82 (119) T ss_dssp HH T ss_pred HH T ss_conf 75 No 49 >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Probab=46.22 E-value=8 Score=16.18 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=27.7 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 739999779803899999999789978999954866 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC 37 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~ 37 (281) +|+.| -|.|..=..+|+.+.++|++++++....+. T Consensus 3 K~Ili-iGaG~~G~~~a~~L~~~g~~V~v~dr~~~~ 37 (182) T d1e5qa1 3 KSVLM-LGSGFVTRPTLDVLTDSGIKVTVACRTLES 37 (182) T ss_dssp CEEEE-ECCSTTHHHHHHHHHTTTCEEEEEESCHHH T ss_pred CEEEE-ECCCHHHHHHHHHHHHCCCEEEEEECCHHH T ss_conf 87999-878799999999998497979999897477 No 50 >d1jx7a_ c.114.1.1 (A:) Hypothetical protein YchN {Escherichia coli [TaxId: 562]} Probab=44.83 E-value=8.4 Score=16.04 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=44.0 Q ss_pred CCEEEEEECCCC-------HHHHHHHHHHHCCC--CEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 973999977980-------38999999997899--789999548667310388567873899999999998649540677 Q gi|254780768|r 1 MKRLLIIAGSGM-------LPYYVAKAARLKND--EPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 1 M~kigIIAG~G~-------LP~~ia~~~~~~g~--~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) |+|+.||.-+|- -+..+|.++..+|+ ++.++...+....-.++.... ....+..+++.|..+|++ +.. T Consensus 1 M~k~~ii~~~~P~~~~~~~~al~~A~a~~~~~~~~eV~vff~~dgV~~~~~~~~~~--~~~~~~~~l~~l~~~gv~-v~v 77 (117) T d1jx7a_ 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPG--EGYNIQQMLEILTAQNVP-VKL 77 (117) T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCS--SSCCHHHHHHHHHHTTCC-EEE T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCC--CCCCHHHHHHHHHHCCCE-EEE T ss_conf 96799998479988289999999999999638897379999662677751557864--435589999999977988-999 Q ss_pred ECCC Q ss_conf 0242 Q gi|254780768|r 72 AGAI 75 (281) Q Consensus 72 aG~V 75 (281) ++.= T Consensus 78 C~~~ 81 (117) T d1jx7a_ 78 CKTC 81 (117) T ss_dssp EHHH T ss_pred EHHH T ss_conf 7788 No 51 >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=43.82 E-value=8.7 Score=15.94 Aligned_cols=28 Identities=29% Similarity=0.299 Sum_probs=22.2 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEE Q ss_conf 39999779803899999999789978999 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIA 31 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii 31 (281) |||+| |-|..=..+++.+.++|+++++. T Consensus 2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~ 29 (152) T d1i36a2 2 RVGFI-GFGEVAQTLASRLRSRGVEVVTS 29 (152) T ss_dssp EEEEE-SCSHHHHHHHHHHHHTTCEEEEC T ss_pred EEEEE-CHHHHHHHHHHHHHHCCCEEEEE T ss_conf 89998-18999999999999879969997 No 52 >d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]} Probab=43.16 E-value=8.9 Score=15.87 Aligned_cols=67 Identities=12% Similarity=0.040 Sum_probs=41.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--CCCEEEE-------EHHHHHHHHHHHHHCCCC Q ss_conf 973999977980389999999978997899995486673103--8856787-------389999999999864954 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQ--DFECREL-------PLGDFCVLRSILHQYNIG 67 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~--~~~~~~~-------~ig~ig~li~~Lk~~~i~ 67 (281) |=|==|||-.|.-..-+++.|+..|++.+.+.-....+...- ..+...+ +.-++..+++.-++.+|+ T Consensus 1 m~~kvLIANRGeiA~Ri~ra~~elgi~tvavys~~D~~~~h~~~ade~v~lg~~~~~~sYl~~~~Ii~~A~~~~~d 76 (114) T d2j9ga2 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAV 76 (114) T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCS T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCEEECCCCCHHHHHCCHHHHHHHHHHHCCC T ss_conf 9740467568899999999999968952777412224434200477602538975243414889999999984786 No 53 >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Probab=42.01 E-value=9.2 Score=15.75 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=28.1 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECC Q ss_conf 7399997798038999999997899789999548 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLN 35 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~ 35 (281) +||-|..|.|-+=..+++++.++|+.++++.-.. T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~ 36 (315) T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD 36 (315) T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCH T ss_conf 8899985872899999999997849899965702 No 54 >d2g0wa1 c.1.15.4 (A:10-284) Hypothetical protein Lmo2234 {Listeria monocytogenes [TaxId: 1639]} Probab=41.91 E-value=9.2 Score=15.74 Aligned_cols=19 Identities=11% Similarity=0.190 Sum_probs=15.6 Q ss_pred HHHHHHHHHCCCEE--EEEEC Q ss_conf 99999999849909--99973 Q gi|254780768|r 232 AKTVQNVIKAGLAG--IALEA 250 (281) Q Consensus 232 ~~Ti~~~~~ag~~g--iaiea 250 (281) +..++.+.+.|+.| +.+|. T Consensus 220 ~~i~~~L~~~gy~G~~~~iE~ 240 (275) T d2g0wa1 220 VGFAKILKEHGVNPRVMGVEV 240 (275) T ss_dssp HHHHHHHHHHTCCCSCEEECC T ss_pred HHHHHHHHHCCCCCCEEEEEE T ss_conf 999999998099988799995 No 55 >d2i1qa1 a.60.4.1 (A:5-64) DNA repair protein Rad51, N-terminal domain {Archaeon Methanococcus voltae [TaxId: 2188]} Probab=40.86 E-value=6.2 Score=16.93 Aligned_cols=20 Identities=35% Similarity=0.772 Sum_probs=14.5 Q ss_pred EECCCCHHHHHHHHHCCCEE Q ss_conf 10662799999999849909 Q gi|254780768|r 226 DLPSIGAKTVQNVIKAGLAG 245 (281) Q Consensus 226 DlP~IG~~Ti~~~~~ag~~g 245 (281) |+|-|||.|.+.+.++|+.. T Consensus 3 ~IpGIG~~~a~~L~~~G~~t 22 (60) T d2i1qa1 3 DLPGVGPSTAEKLVEAGYID 22 (60) T ss_dssp TSTTCCHHHHHHHHHHTCCS T ss_pred CCCCCCHHHHHHHHHCCCCC T ss_conf 88898999999999836999 No 56 >d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Probab=40.63 E-value=7.1 Score=16.50 Aligned_cols=43 Identities=9% Similarity=0.031 Sum_probs=30.8 Q ss_pred HHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECHH Q ss_conf 9999999849909999739779985899999999879689995775 Q gi|254780768|r 233 KTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCGIDRE 278 (281) Q Consensus 233 ~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g~~~~ 278 (281) +.++.+.+.+..|+++..|.. -.++++++|+++++-++..+.+ T Consensus 71 ~~i~~l~~~~~~~lIit~g~~---~p~~li~~a~~~~iPll~t~~~ 113 (129) T d1ko7a1 71 GRMRKLCRPETPAIIVTRDLE---PPEELIEAAKEHETPLITSKIA 113 (129) T ss_dssp THHHHHCCTTCCCEEECTTCC---CCHHHHHHHHHTTCCEEECCSC T ss_pred HHHHHHHCCCCCEEEEECCCC---CCHHHHHHHHHHCCEEEEECCC T ss_conf 999998178986899979999---9899999999809849995785 No 57 >d1vmka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima [TaxId: 2336]} Probab=40.56 E-value=9.7 Score=15.61 Aligned_cols=27 Identities=11% Similarity=0.044 Sum_probs=21.5 Q ss_pred EEHHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 738999999999986495406770242 Q gi|254780768|r 49 LPLGDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 49 ~~ig~ig~li~~Lk~~~i~~ivmaG~V 75 (281) .++.++-.-+..|+.-||+.++....+ T Consensus 86 ~~~~~v~~~i~al~~lGv~~ii~tna~ 112 (265) T d1vmka_ 86 HDPATVAFPVYLAKYVGVKGVVVTNAA 112 (265) T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEEEEE T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 888994259999987398769996143 No 58 >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Probab=40.04 E-value=9.9 Score=15.55 Aligned_cols=26 Identities=8% Similarity=-0.059 Sum_probs=12.8 Q ss_pred EHHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 38999999999986495406770242 Q gi|254780768|r 50 PLGDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 50 ~ig~ig~li~~Lk~~~i~~ivmaG~V 75 (281) +-.++-+=+..+|+.||.-|=+.++. T Consensus 35 ~~~~~~~di~l~k~~G~N~iR~~~~p 60 (292) T d1jz8a5 35 DEQTMVQDILLMKQNNFNAVRCSHYP 60 (292) T ss_dssp CHHHHHHHHHHHHHTTCCEEECTTSC T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 99999999999996699889965899 No 59 >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Probab=39.78 E-value=9.2 Score=15.75 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=27.5 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 973999977980389999999978997899995 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) |+||+ |-|.|..=..+|..+-.+|+++.+... T Consensus 7 m~KI~-ViGaG~wGtAlA~~La~~g~~V~l~~r 38 (189) T d1n1ea2 7 LNKAV-VFGSGAFGTALAMVLSKKCREVCVWHM 38 (189) T ss_dssp EEEEE-EECCSHHHHHHHHHHHTTEEEEEEECS T ss_pred ECEEE-EECCCHHHHHHHHHHHHCCCEEEEEEE T ss_conf 15699-999899999999999975996899992 No 60 >d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Probab=39.71 E-value=9.7 Score=15.59 Aligned_cols=76 Identities=13% Similarity=0.176 Sum_probs=40.4 Q ss_pred CC-EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCC Q ss_conf 97-39999779803899999999789978999954866731038856787389999999999864954067702423210 Q gi|254780768|r 1 MK-RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRP 79 (281) Q Consensus 1 M~-kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP 79 (281) |+ =|||-.|-|.==-.+++.+.+.|+.++ .. +.....+.+... + -...+ .+..+-.-.-.-|.++ |. T Consensus 2 mk~iIgitG~igSGKStv~~~l~~~G~~vi--da-D~i~~~l~~~~~---~--~~~~i---~~~fg~~i~~~~~~i~-r~ 69 (208) T d1vhta_ 2 LRYIVALTGGIGSGKSTVANAFADLGINVI--DA-DIIARQVVEPGA---P--ALHAI---ADHFGANMIAADGTLQ-RR 69 (208) T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHTTCEEE--EH-HHHHHHTTSTTC---T--HHHHH---HHHHCGGGBCTTSCBC-HH T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCCEE--EC-HHHHHHHHHCCC---H--HHHHH---HHHHHCCCCCCCCCCC-HH T ss_conf 887999789886889999999998799199--74-399999984133---6--78999---9876000124786520-01 Q ss_pred CHHHHCCCH Q ss_conf 001110260 Q gi|254780768|r 80 NVQDLCFSI 88 (281) Q Consensus 80 ~~~~l~~D~ 88 (281) .+..+.+.- T Consensus 70 ~L~~~vf~~ 78 (208) T d1vhta_ 70 ALRERIFAN 78 (208) T ss_dssp HHHHHHHTC T ss_pred HHHHHHHHH T ss_conf 246665213 No 61 >d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Probab=38.28 E-value=8.8 Score=15.89 Aligned_cols=29 Identities=17% Similarity=-0.015 Sum_probs=21.9 Q ss_pred CCE-EEEEECCCCHHHHHHHHHHHCCCCEE Q ss_conf 973-99997798038999999997899789 Q gi|254780768|r 1 MKR-LLIIAGSGMLPYYVAKAARLKNDEPV 29 (281) Q Consensus 1 M~k-igIIAG~G~LP~~ia~~~~~~g~~~~ 29 (281) |.- |||-.|.|+==-.+++.+.+.|++++ T Consensus 1 M~~iIgITG~igSGKStv~~~l~~~G~~vi 30 (205) T d1jjva_ 1 MTYIVGLTGGIGSGKTTIANLFTDLGVPLV 30 (205) T ss_dssp CCEEEEEECSTTSCHHHHHHHHHTTTCCEE T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCEEE T ss_conf 968999888887889999999998799399 No 62 >d2hy5b1 c.114.1.1 (B:205-336) Intracellular sulfur oxidation protein DsrF {Chromatium vinosum [TaxId: 1049]} Probab=38.22 E-value=5.3 Score=17.36 Aligned_cols=74 Identities=11% Similarity=0.214 Sum_probs=48.1 Q ss_pred CCEEEEEECCCCH-------HHHHHHHHHHCCCCEEEEEECCCCCCCCC-CCCEEEEEHHHHHHHHHHHHHCCCCEEEEE Q ss_conf 9739999779803-------89999999978997899995486673103-885678738999999999986495406770 Q gi|254780768|r 1 MKRLLIIAGSGML-------PYYVAKAARLKNDEPVIASVLNECSFDWQ-DFECRELPLGDFCVLRSILHQYNIGRIVVA 72 (281) Q Consensus 1 M~kigIIAG~G~L-------P~~ia~~~~~~g~~~~ii~l~~~~~~~~~-~~~~~~~~ig~ig~li~~Lk~~~i~~ivma 72 (281) |+|+.+|--++-+ ...+|.++...+.++.++.. +....... +-.-.......+.++++.|...++.++.-+ T Consensus 1 Mkk~l~ii~~aPy~s~~a~~al~~A~aa~~~~~~v~vff~-~dGV~~l~~~q~p~~~~~~~l~~~l~~l~~~~v~~v~vc 79 (132) T d2hy5b1 1 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFL-DDGVYQLTRGQDTKGIGMKNFSPTYRTLGDYEVRRIYVD 79 (132) T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEEC-GGGGGGGBSCCCCGGGTCCCCGGGGGGGGGGTCCEEEEE T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE-CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC T ss_conf 9679999668999867999999999999707997799995-429888544689876688789999999986598537761 Q ss_pred CCC Q ss_conf 242 Q gi|254780768|r 73 GAI 75 (281) Q Consensus 73 G~V 75 (281) +.- T Consensus 80 ~~s 82 (132) T d2hy5b1 80 RDS 82 (132) T ss_dssp HHH T ss_pred HHH T ss_conf 999 No 63 >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=37.92 E-value=11 Score=15.34 Aligned_cols=74 Identities=22% Similarity=0.235 Sum_probs=50.6 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEE-E-----------C---CCCCC----------CCCCCCEEEEEHHHHHH Q ss_conf 7399997798038999999997899789999-5-----------4---86673----------10388567873899999 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIAS-V-----------L---NECSF----------DWQDFECRELPLGDFCV 56 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~-l-----------~---~~~~~----------~~~~~~~~~~~ig~ig~ 56 (281) .||-|..|+|-+-..+++.+.++|++++++. + . ..... ..+++.+...++.+... T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393) T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393) T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHH T ss_conf 98999899848999999999978598999946775422110121113433215778877776227970799830789999 Q ss_pred HHHHHHHCCCCEEEEECCC Q ss_conf 9999986495406770242 Q gi|254780768|r 57 LRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 57 li~~Lk~~~i~~ivmaG~V 75 (281) +-+.++..+++.|+-+... T Consensus 82 l~~~~~~~~~d~ViHlAa~ 100 (393) T d1i24a_ 82 LAESFKSFEPDSVVHFGEQ 100 (393) T ss_dssp HHHHHHHHCCSEEEECCSC T ss_pred HHHHHHHHCCHHEECCCCC T ss_conf 9999975110120012342 No 64 >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Probab=37.80 E-value=4.2 Score=18.08 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=33.4 Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCE Q ss_conf 9997798038999999997899789999548667310388567873899999999998649540 Q gi|254780768|r 5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGR 68 (281) Q Consensus 5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ 68 (281) -||+|+|.+-..+++.++ +++++++................++. |+... -+.|++.++.+ T Consensus 3 ivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~-~~~L~~a~i~~ 62 (129) T d2fy8a1 3 VVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVH-GDPTR-VSDLEKANVRG 62 (129) T ss_dssp EEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEE-SCTTS-HHHHHHTTCTT T ss_pred EEEECCCHHHHHHHHHHC--CCCCEEEECCHHHHHHHHHCCCCCCC-CCCCC-HHHHHHHHHHC T ss_conf 999898889999999975--79988998264888999862861125-65477-78897743513 No 65 >d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]} Probab=37.67 E-value=7.3 Score=16.44 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=42.8 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH Q ss_conf 3589999999997697482112225242035433455465323478899 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL 155 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~ 155 (281) +.|+.+..+.|.++|+.=++..++....=++.|.+...=|++++.-.-. T Consensus 4 e~i~~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~iy~~F~sK~~L~~~~ 52 (69) T d2np5a1 4 ERLAAALFDVAAESGLEGASVREVAKRAGVSIGAVQHHFSTKDEMFAFA 52 (69) T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHH T ss_conf 9999999999998491406799999883988879988883999999999 No 66 >d1pzna1 a.60.4.1 (A:35-95) DNA repair protein Rad51, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=37.31 E-value=8.1 Score=16.14 Aligned_cols=20 Identities=35% Similarity=0.660 Sum_probs=14.3 Q ss_pred EECCCCHHHHHHHHHCCCEE Q ss_conf 10662799999999849909 Q gi|254780768|r 226 DLPSIGAKTVQNVIKAGLAG 245 (281) Q Consensus 226 DlP~IG~~Ti~~~~~ag~~g 245 (281) ++|-|||.|.+.+.++++.. T Consensus 5 ~i~GIG~~~a~~L~~~g~~s 24 (61) T d1pzna1 5 DLPGVGPATAEKLREAGYDT 24 (61) T ss_dssp CCTTCCHHHHHHHHTTTCCS T ss_pred CCCCCCHHHHHHHHHHCCCC T ss_conf 17997999999999944999 No 67 >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Probab=37.29 E-value=11 Score=15.27 Aligned_cols=29 Identities=21% Similarity=0.220 Sum_probs=23.1 Q ss_pred EEEEEECCCCHHHHHHHHHHHCC-CCEEEEE Q ss_conf 39999779803899999999789-9789999 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKN-DEPVIAS 32 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g-~~~~ii~ 32 (281) |||+| |.|++-..+++.+.++| +++++.. T Consensus 2 kI~fI-G~G~MG~ai~~~l~~~~~~~i~v~~ 31 (152) T d1yqga2 2 NVYFL-GGGNMAAAVAGGLVKQGGYRIYIAN 31 (152) T ss_dssp EEEEE-CCSHHHHHHHHHHHHHCSCEEEEEC T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCCEEEEE T ss_conf 89999-6749999999999978997589994 No 68 >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Probab=36.01 E-value=11 Score=15.14 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=29.3 Q ss_pred CEEEEEECCCC---HHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 73999977980---389999999978997899995486 Q gi|254780768|r 2 KRLLIIAGSGM---LPYYVAKAARLKNDEPVIASVLNE 36 (281) Q Consensus 2 ~kigIIAG~G~---LP~~ia~~~~~~g~~~~ii~l~~~ 36 (281) +|.+||-|.+. +-..+|+.+.+.|.++++...... T Consensus 5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~ 42 (258) T d1qsga_ 5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK 42 (258) T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHH T ss_conf 98799989998511899999999986999999958889 No 69 >d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Probab=34.26 E-value=12 Score=14.96 Aligned_cols=32 Identities=13% Similarity=0.152 Sum_probs=28.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE Q ss_conf 97399997798038999999997899789999 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIAS 32 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~ 32 (281) |.||.||=-...+...+++.++..|.++.++. T Consensus 1 m~ki~iiD~g~~~~~~i~r~l~~lg~~~~i~~ 32 (196) T d2a9va1 1 MLKIYVVDNGGQWTHREWRVLRELGVDTKIVP 32 (196) T ss_dssp CCBEEEEEESCCTTCHHHHHHHHTTCBCCEEE T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEE T ss_conf 98899998987299999999997898699993 No 70 >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Probab=34.20 E-value=12 Score=14.95 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=36.6 Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEEECCC-CCC-CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH Q ss_conf 99977980389999999978997899995486-673-1038856787389999999999864954067702423210001 Q gi|254780768|r 5 LIIAGSGMLPYYVAKAARLKNDEPVIASVLNE-CSF-DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQ 82 (281) Q Consensus 5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~-~~~-~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~ 82 (281) .+|-|.|..-..+++.+...|..-+.+.=+.. ... ....+...+.++.++.. .++ ..+=|+.+-.-+ .|.+. T Consensus 27 ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~---~l~--~~Divi~atss~-~~ii~ 100 (159) T d1gpja2 27 VLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD---HLA--RSDVVVSATAAP-HPVIH 100 (159) T ss_dssp EEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH---HHH--TCSEEEECCSSS-SCCBC T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH---HHC--CCCEEEEECCCC-CCCCC T ss_conf 999879889999999999669857999758688999988864114345145787---735--489999924898-76412 No 71 >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Probab=34.12 E-value=12 Score=14.94 Aligned_cols=15 Identities=13% Similarity=0.029 Sum_probs=8.9 Q ss_pred HHHHHHHHCCCEEEC Q ss_conf 999999976974821 Q gi|254780768|r 112 ASIDLLESYGVSVVG 126 (281) Q Consensus 112 ~i~~~fe~~G~~vi~ 126 (281) .+..+|+..||+|+. T Consensus 56 ~va~~l~~~G~eVi~ 70 (168) T d7reqa2 56 VIATAYADLGFDVDV 70 (168) T ss_dssp HHHHHHHHTTCEEEE T ss_pred HHHHHHHHCCCCEEC T ss_conf 999999867851420 No 72 >d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Probab=33.92 E-value=12 Score=14.92 Aligned_cols=130 Identities=12% Similarity=0.022 Sum_probs=66.7 Q ss_pred EEEEEECC--C---CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCC Q ss_conf 39999779--8---038999999997899789999548667310388567873899999999998649540677024232 Q gi|254780768|r 3 RLLIIAGS--G---MLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDR 77 (281) Q Consensus 3 kigIIAG~--G---~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~k 77 (281) |+-||-++ | .+...|++.+...|.++.++.+...... .+...+.. + +.++.|.=+- T Consensus 4 K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~~~~~~----------------~~~~~~~~--~-d~ii~Gspt~ 64 (149) T d1ycga1 4 KAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVSDRN----------------DVIKEILD--A-RAVLVGSPTI 64 (149) T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGSCHH----------------HHHHHHHH--C-SEEEEECCCB T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH----------------HHHHHHHH--C-CEEEEEEECC T ss_conf 799999999808999999999998756982699971435568----------------77543641--7-8499996034 Q ss_pred CCCHHHHCCCHHHHHHHHHHH---------HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCH Q ss_conf 100011102603578999999---------87510480358999999999769748211222524203543345546532 Q gi|254780768|r 78 RPNVQDLCFSIKDSLRISKMI---------WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNR 148 (281) Q Consensus 78 rP~~~~l~~D~~~~~~l~k~l---------~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~ 148 (281) .....+.++..+...+-. +.. ..+.+..++.+.+.++..|++++.. +++.....|++ T Consensus 65 ---~g~~~~~~~~~l~~l~~~~~~~k~~~~fgs-~g~~g~a~~~l~~~l~~~g~~~v~~----------~~~~~~~~P~~ 130 (149) T d1ycga1 65 ---NNDILPVVSPLLDDLVGLRPKNKVGLAFGA-YGWGGGAQKILEERLKAAKIELIAE----------PGPTVQWVPRG 130 (149) T ss_dssp ---TTBCCGGGHHHHHHHHHHCCSSCEEEEEEE-ESSSCCHHHHHHHHHHHTTCEESCS----------SCCEEESSCCH T ss_pred ---CCCCCHHHHHHHHHHHCCCCCCCEEEEEEC-CCCCCHHHHHHHHHHHHCCCEEECC----------CEEEECCCCCH T ss_conf ---677798999999987504558987999951-3687136999999999879999615----------55899056898 Q ss_pred HHHHH-HHHHHHHHHHHC Q ss_conf 34788-998999999733 Q gi|254780768|r 149 DVKRD-ILAAMKSAEALS 165 (281) Q Consensus 149 ~~~~d-I~~g~~i~~~l~ 165 (281) ++++. -++|.+++.++. T Consensus 131 ~dl~~~~e~g~~ia~kl~ 148 (149) T d1ycga1 131 EDLQRCYELGRKIAARIA 148 (149) T ss_dssp HHHHHHHHHHHHHHHHHC T ss_pred HHHHHHHHHHHHHHHHHH T ss_conf 999999999999999862 No 73 >d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]} Probab=33.23 E-value=13 Score=14.85 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=11.4 Q ss_pred CHHHHHHHHHCCCEEEEEEC Q ss_conf 79999999984990999973 Q gi|254780768|r 231 GAKTVQNVIKAGLAGIALEA 250 (281) Q Consensus 231 G~~Ti~~~~~ag~~giaiea 250 (281) .-.+...+.+.|+..|.+.. T Consensus 206 k~h~~~~a~~~gi~li~~GH 225 (265) T d2fywa1 206 YYHTAQDMLSDGLLALDPGH 225 (265) T ss_dssp CHHHHHHHHHTTCEEEECCG T ss_pred CCHHHHHHHHCCCEEEECCC T ss_conf 71789999866997997886 No 74 >d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]} Probab=33.11 E-value=11 Score=15.15 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=41.8 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 35899999999976974821122252420354334554653234788 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) +.|+.+..+.|.+.|+.=++..++....=.++|.+...-+++++... T Consensus 7 ~~Il~aa~~l~~~~g~~~~si~~ia~~~gvs~~~~y~hF~~K~~L~~ 53 (68) T d2g7la1 7 RWIVDTAVALMRAEGLEKVTMRRLAQELDTGPASLYVYVANTAELHA 53 (68) T ss_dssp HHHHHHHHHHHHHHCSSSCCHHHHHHHTTSCHHHHTTTCCSHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH T ss_conf 99999999999984903078999999978287676287759999999 No 75 >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} Probab=33.09 E-value=13 Score=14.83 Aligned_cols=26 Identities=8% Similarity=-0.037 Sum_probs=17.3 Q ss_pred EECCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 81974889625342179999999754 Q gi|254780768|r 175 SIGGRVVALEGIEGTDSMLQRIVDCR 200 (281) Q Consensus 175 v~~g~ViaiEa~eGTD~mi~R~~~~~ 200 (281) .--|+|--.+...-.+++++|+.+.- T Consensus 240 ~G~Grig~l~~p~~l~~~~~~vk~~l 265 (370) T d2gx8a1 240 LGLGKIGYLQEEMTLGQFAEHVKQSL 265 (370) T ss_dssp EEEEEEEEEEEEEEHHHHHHHHHHHT T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHC T ss_conf 57645999378603999999999871 No 76 >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Probab=33.06 E-value=13 Score=14.83 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=10.9 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 999999999986495406770242 Q gi|254780768|r 52 GDFCVLRSILHQYNIGRIVVAGAI 75 (281) Q Consensus 52 g~ig~li~~Lk~~~i~~ivmaG~V 75 (281) ....+-+..+|+.|+.-|=+..+. T Consensus 36 ~~~~~di~l~k~~G~N~iR~~h~p 59 (297) T d1yq2a5 36 AGAREDLALMKRFNVNAIRTSHYP 59 (297) T ss_dssp HHHHHHHHHHHHTTCCEEEETTSC T ss_pred HHHHHHHHHHHHCCCCEEECCCCC T ss_conf 999999999997799889856899 No 77 >d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]} Probab=32.84 E-value=13 Score=14.81 Aligned_cols=49 Identities=20% Similarity=0.143 Sum_probs=43.3 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) -+.|+.+..+.|.++|+.=++..++....=++.|-+...-|++++...- T Consensus 9 r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~~Ke~L~~~ 57 (76) T d2fd5a1 9 RARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLE 57 (76) T ss_dssp HHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGGGGGGTCSCHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHH T ss_conf 9999999999999849130569999998389955004208999999999 No 78 >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Probab=32.69 E-value=13 Score=14.79 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=29.3 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 973999977980389999999978997899995 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) .+||-|+.|+|.+=..+++++.++|++++++.- T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R 35 (307) T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVR 35 (307) T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 898999899868999999999978896999988 No 79 >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Probab=32.65 E-value=13 Score=14.79 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=28.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 973999977980389999999978997899995 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) ++||-|+.|.|.+=..+++.+.++|++++++.- T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R 35 (312) T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFR 35 (312) T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 899999899878999999999968797999989 No 80 >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Probab=32.46 E-value=13 Score=14.76 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=38.7 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 97399997798038999999997899789999548667310388567873899999999998649540677024 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) |++|+|+.-.|+.=....+-+++...++-++++....+. .++.+..++.+.+.+++.-. T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~---------------~~L~~q~~ef~Pk~v~i~d~ 60 (150) T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNV---------------KDLADAAKRTNAKRAVIADP 60 (150) T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH---------------HHHHHHHHHTTCSEEEESCG T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCH---------------HHHHHHHHHHCCCCCEECCH T ss_conf 958999887969999999999819777189999957978---------------99888887534443032118 No 81 >d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]} Probab=31.80 E-value=13 Score=14.69 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=43.6 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH Q ss_conf 03589999999997697482112225242035433455465323478899 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL 155 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~ 155 (281) -+.|+.+....|.++|+.=++..++..+.=++.|.+...-|++++..... T Consensus 11 r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~k~~L~~~~ 60 (79) T d2oi8a1 11 RAEIKDHAWEQIATAGASALSLNAIAKRMGMSGPALYRYFDGRDELITEL 60 (79) T ss_dssp HHHHHHHHHHHHHHHCTTSCCHHHHHHHTTCCHHHHHTTCSSHHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHH T ss_conf 99999999999998690306799999986799774455169999999999 No 82 >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Probab=31.29 E-value=13 Score=14.64 Aligned_cols=148 Identities=17% Similarity=0.088 Sum_probs=77.1 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH Q ss_conf 399997798038999999997899789999548667310388-5678738999999999986495406770242321000 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDF-ECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNV 81 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~-~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~ 81 (281) |+|+| |-|..=.-+|+.+.++|+++++.....+....+... ....-+.. +..+. ++-++.+ +...+.. T Consensus 2 kIgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~------e~~~~--~d~ii~~--v~~~~~v 70 (161) T d1vpda2 2 KVGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAK------AIAEQ--CDVIITM--LPNSPHV 70 (161) T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHH------HHHHH--CSEEEEC--CSSHHHH T ss_pred EEEEE-EHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH------HHHHC--CCEEEEE--CCCHHHH T ss_conf 89999-436989999999998799699992884035789874000102399------99858--9958997--4997889 Q ss_pred HHHCCCHHHHHHHHHHH-----HHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 11102603578999999-----8751048035899999999976974821122252420354334554653234788998 Q gi|254780768|r 82 QDLCFSIKDSLRISKMI-----WQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILA 156 (281) Q Consensus 82 ~~l~~D~~~~~~l~k~l-----~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~ 156 (281) ....+.... +...+ .-.....+-...+.+.+.+++.|++.+++.-.-..--+..|.++---- -+..++++ T Consensus 71 ~~v~~~~~~---~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~~a~~g~l~~~~g--G~~~~~~~ 145 (161) T d1vpda2 71 KEVALGENG---IIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVG--GDKAIFDK 145 (161) T ss_dssp HHHHHSTTC---HHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEE--SCHHHHHH T ss_pred HHHHHCCCC---HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCEEEEEC--CCHHHHHH T ss_conf 999827763---0101589989997887998999999999998599555553557865773588699980--89999999 Q ss_pred HHHHHHHHCC Q ss_conf 9999997332 Q gi|254780768|r 157 AMKSAEALSE 166 (281) Q Consensus 157 g~~i~~~l~~ 166 (281) ...+++.+++ T Consensus 146 ~~~il~~~~~ 155 (161) T d1vpda2 146 YYDLMKAMAG 155 (161) T ss_dssp HHHHHHTTEE T ss_pred HHHHHHHHCC T ss_conf 9999999668 No 83 >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Probab=30.89 E-value=14 Score=14.59 Aligned_cols=73 Identities=19% Similarity=0.263 Sum_probs=42.7 Q ss_pred CEEEEEECC--CCH--HHHHHHHHHHCCCCEEEEEECCCCCCCC---CCCCEEEEE-------------------HHHHH Q ss_conf 739999779--803--8999999997899789999548667310---388567873-------------------89999 Q gi|254780768|r 2 KRLLIIAGS--GML--PYYVAKAARLKNDEPVIASVLNECSFDW---QDFECRELP-------------------LGDFC 55 (281) Q Consensus 2 ~kigIIAG~--G~L--P~~ia~~~~~~g~~~~ii~l~~~~~~~~---~~~~~~~~~-------------------ig~ig 55 (281) +||-|.+|+ |+. -..++++++++|+++.++.-.+..+.++ ..++...++ ...+. T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351) T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR 80 (351) T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 97999838858989999999999985899899999588324322350499579997888677777999999988777677 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998649540677024 Q gi|254780768|r 56 VLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 56 ~li~~Lk~~~i~~ivmaG~ 74 (281) .....+++.....++..+. T Consensus 81 ~~~~i~~~~~~~~~~~~~~ 99 (351) T d1f0ka_ 81 QARAIMKAYKPDVVLGMGG 99 (351) T ss_dssp HHHHHHHHHCCSEEEECSS T ss_pred HHHHHHHCCCCCEEEECCC T ss_conf 7788763134430011032 No 84 >d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]} Probab=29.98 E-value=14 Score=14.49 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=44.2 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889989 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAA 157 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~g 157 (281) -..|+.+....|.++|+.=++..+++...=++.|.+...-+++++.-..-.- T Consensus 8 ~~~I~~aa~~l~~~~G~~~~sv~~Ia~~agvs~~t~Y~~F~~k~~l~~~~~~ 59 (71) T d2iu5a1 8 QKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFE 59 (71) T ss_dssp HHHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCGGGGGGTCSSHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH T ss_conf 9999999999999849640779999987571645897776799999999999 No 85 >d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]} Probab=29.53 E-value=13 Score=14.85 Aligned_cols=49 Identities=20% Similarity=0.175 Sum_probs=42.8 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) -+.|+.+-.+.|.++|+.=++..++....=+++|-+...-|++++...- T Consensus 5 ~e~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~slY~yF~~k~~L~~~ 53 (72) T d1zk8a1 5 LQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKN 53 (72) T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHTTTCSSHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 9999999999999869775669999999597999998988399999999 No 86 >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Probab=29.53 E-value=14 Score=14.44 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=27.8 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 3999977980389999999978997899995486 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNE 36 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~ 36 (281) ||+|| |.|..=..++..+.+.|+++.++.-... T Consensus 2 kI~Ii-GaG~iG~~~a~~L~~~G~~V~~~~r~~~ 34 (167) T d1ks9a2 2 KITVL-GCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (167) T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCEEEEECCHH T ss_conf 89999-9589999999999987994599970778 No 87 >d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} Probab=29.49 E-value=14 Score=14.44 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=25.4 Q ss_pred CEEEEEECCCCHHH--------HHHHHHHHCCCCEEEEEECCC Q ss_conf 73999977980389--------999999978997899995486 Q gi|254780768|r 2 KRLLIIAGSGMLPY--------YVAKAARLKNDEPVIASVLNE 36 (281) Q Consensus 2 ~kigIIAG~G~LP~--------~ia~~~~~~g~~~~ii~l~~~ 36 (281) +|||+++|.-+-=+ .+.+++.+.+++++.+..... T Consensus 3 ~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~ 45 (96) T d1iowa1 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEV 45 (96) T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC T ss_conf 4599995757622476886699999999875925764067521 No 88 >d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]} Probab=29.14 E-value=15 Score=14.40 Aligned_cols=96 Identities=14% Similarity=0.170 Sum_probs=62.9 Q ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH Q ss_conf 997798038999999997899789999548667310388-5678738999999999986495406770242321000111 Q gi|254780768|r 6 IIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDF-ECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQDL 84 (281) Q Consensus 6 IIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~-~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~~l 84 (281) ||-|+|-==..++.++.+......+....++........ .+..++..++..+.++.++++++ +|++|.= -|. T Consensus 6 LvIGsGgREhAia~~L~~s~~~~~l~~~pgn~g~~~~~~~~~~~~~~~d~~~i~~~a~~~~id-lvviGPE--~pL---- 78 (105) T d1gsoa2 6 LVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKID-LTIVGPE--APL---- 78 (105) T ss_dssp EEEECSHHHHHHHHHHTTCTTEEEEEEEECCHHHHHSTTEEECCCCTTCHHHHHHHHHHTTCS-EEEECSH--HHH---- T ss_pred EEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCC-EEEECCH--HHH---- T ss_conf 998888799999999833887647999518776310223305554357689999899982968-8997708--888---- Q ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHH Q ss_conf 0260357899999987510480358999999999769748211222524 Q gi|254780768|r 85 CFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPE 133 (281) Q Consensus 85 ~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ 133 (281) -..++++|+++|+.+++++.-... T Consensus 79 -------------------------~~Gl~D~l~~~gI~vfGP~k~aA~ 102 (105) T d1gsoa2 79 -------------------------VKGVVDTFRAAGLKIFGPTAGAAQ 102 (105) T ss_dssp -------------------------HTTHHHHHHHTTCCEESCCTTTTH T ss_pred -------------------------HHHHHHHHHHCCCEEECCCHHHHH T ss_conf -------------------------769999999887979992879983 No 89 >d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]} Probab=28.90 E-value=6.9 Score=16.62 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=63.1 Q ss_pred HHHHHHHHCCCCEEEEEECCCCC-----CC----CCCCCEEEE--EHHHH--HHHHHHHHHCCCCEEEEECCCCCCCCHH Q ss_conf 99999997899789999548667-----31----038856787--38999--9999999864954067702423210001 Q gi|254780768|r 16 YVAKAARLKNDEPVIASVLNECS-----FD----WQDFECREL--PLGDF--CVLRSILHQYNIGRIVVAGAIDRRPNVQ 82 (281) Q Consensus 16 ~ia~~~~~~g~~~~ii~l~~~~~-----~~----~~~~~~~~~--~ig~i--g~li~~Lk~~~i~~ivmaG~V~krP~~~ 82 (281) .+++.++..|.+++......... +. +.+...... .++.+ ..+..+|+++|+++++++|-.+. -=. T Consensus 41 ~L~~~ar~~~~pvi~t~~~~~~~~~~~~~~~~~~~~~~~~v~~K~~~saf~~t~L~~~L~~~gi~~lil~G~~T~-~CV- 118 (204) T d1yaca_ 41 ALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTE-VCV- 118 (204) T ss_dssp HHHHHHHHTTCCEEEEEESTTTTTCCBCHHHHHHCTTSCEEEESSCSSGGGSHHHHHHHHHTTCSEEEEEEBSCC-CCC- T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECC-CHH- T ss_conf 999999966998489996257877753211200168887477458466664336899998569977999974045-089- Q ss_pred HHCCCHHHHHHHHHH------HHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCC Q ss_conf 110260357899999------987510480358999999999769748211222524203 Q gi|254780768|r 83 DLCFSIKDSLRISKM------IWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLV 136 (281) Q Consensus 83 ~l~~D~~~~~~l~k~------l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~ 136 (281) . .+..-+... +.-.....|...-.+-.+.+...|..++...+++-||+- T Consensus 119 ----~-~Ta~dA~~~Gy~V~vv~Da~as~~~~~he~Al~~m~~~g~~i~t~e~v~~el~r 173 (204) T d1yaca_ 119 ----A-FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHR 173 (204) T ss_dssp ----H-HHHHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEECHHHHHHHHHC T ss_pred ----H-HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH T ss_conf ----8-889999986997999572628787589999999999879999639999999985 No 90 >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Probab=28.88 E-value=15 Score=14.37 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=14.2 Q ss_pred EECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 977980389999999978997899995 Q gi|254780768|r 7 IAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 7 IAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) |.|+|-.-.++|..+...|.++.++.. T Consensus 35 ViGgG~iG~E~A~~l~~~g~~Vtlie~ 61 (123) T d1nhpa2 35 VIGSGYIGIEAAEAFAKAGKKVTVIDI 61 (123) T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEES T ss_pred EECCHHHHHHHHHHHHCCCEEEEEEEE T ss_conf 999718799999986104537999974 No 91 >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Probab=28.38 E-value=15 Score=14.31 Aligned_cols=72 Identities=11% Similarity=0.085 Sum_probs=46.1 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-------CCC--CCCEEEEEHHHHHHHHHHHHHCCCCEEEE Q ss_conf 973999977980389999999978997899995486673-------103--88567873899999999998649540677 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSF-------DWQ--DFECRELPLGDFCVLRSILHQYNIGRIVV 71 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-------~~~--~~~~~~~~ig~ig~li~~Lk~~~i~~ivm 71 (281) |+||-|..|+|-+=..+++.+.++|+++.++.+...+.. .+. +......++.+...+...++. +..++. T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~--~~~v~~ 79 (346) T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK--ADAIVH 79 (346) T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT--CSEEEE T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH--HHHHHH T ss_conf 399999188868999999999977997499998488742348788886258808997627898999987752--003544 Q ss_pred ECC Q ss_conf 024 Q gi|254780768|r 72 AGA 74 (281) Q Consensus 72 aG~ 74 (281) ... T Consensus 80 ~a~ 82 (346) T d1oc2a_ 80 YAA 82 (346) T ss_dssp CCS T ss_pred HHH T ss_conf 432 No 92 >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Probab=27.88 E-value=15 Score=14.26 Aligned_cols=17 Identities=6% Similarity=0.012 Sum_probs=9.3 Q ss_pred HHHHHHHHHHHCCCCEE Q ss_conf 99999999986495406 Q gi|254780768|r 53 DFCVLRSILHQYNIGRI 69 (281) Q Consensus 53 ~ig~li~~Lk~~~i~~i 69 (281) ++.+.++.+++.|++-| T Consensus 40 ~~~~~l~~~k~~G~N~v 56 (370) T d1rh9a1 40 KVTNTFQQASKYKMNVA 56 (370) T ss_dssp HHHHHHHHHHHTTCCEE T ss_pred HHHHHHHHHHHCCCEEE T ss_conf 99999999998799199 No 93 >d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]} Probab=27.54 E-value=13 Score=14.72 Aligned_cols=48 Identities=21% Similarity=0.199 Sum_probs=42.3 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 358999999999769748211222524203543345546532347889 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) +.|+.+-.+.|.++|+.=++..++....=+++|-+...=|++++.-.- T Consensus 3 ~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~sK~~L~~~ 50 (70) T d2gena1 3 DEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGE 50 (70) T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCHHHHHHHTCSHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 999999999999859240879999998795877999898799999999 No 94 >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Probab=27.40 E-value=16 Score=14.20 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=28.9 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE Q ss_conf 73999977980389999999978997899995 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l 33 (281) ++|.++.|+|.+=..+++.+.++|++++++.- T Consensus 4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R 35 (350) T d1xgka_ 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVH 35 (350) T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEES T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 99999898728999999999968896999977 No 95 >d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Probab=27.11 E-value=16 Score=14.17 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=32.9 Q ss_pred HHHHHHHHHCCCE--EEEEE----CCCEEEECHHHHHHHHHHCCCEEEEECH Q ss_conf 9999999984990--99997----3977998589999999987968999577 Q gi|254780768|r 232 AKTVQNVIKAGLA--GIALE----AGKSLVLEKELVKKHADEAGIFVCGIDR 277 (281) Q Consensus 232 ~~Ti~~~~~ag~~--giaie----a~~~lild~~~~i~~a~~~~i~i~g~~~ 277 (281) .-++.++.-||+. ++..| .+++ .+..++..++|++|+|.++.++. T Consensus 145 EasvdL~~lAGl~P~avi~Eil~d~dG~-~~~~~~~~~fA~~~~l~~isi~d 195 (202) T d1tksa_ 145 EAAVQLSTLAGLQPAGVICELVRDEDGL-MMRLDDCIQFGKKHGIKIININQ 195 (202) T ss_dssp HHHHHHHHHTTSCSBEEEEEBBCTTTCC-BCBHHHHHHHHHHHTCCEEEHHH T ss_pred HHHHHHHHHCCCCCCEEEEEEEECCCCC-CCCHHHHHHHHHHCCCCEEEHHH T ss_conf 9999999836998618999998879987-34899999999985997998999 No 96 >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Probab=26.97 E-value=16 Score=14.15 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=53.4 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEE-ECCCCCC-------CCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 399997798038999999997899789999-5486673-------10388567873899999999998649540677024 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIAS-VLNECSF-------DWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGA 74 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~-l~~~~~~-------~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~ 74 (281) ||=|..|.|-+=..+.+.+.++|++++++. +...... ...++++...++.....+-+.++..+.+.|+-+.. T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338) T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338) T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECC T ss_conf 79998987289999999999783989999798866516678875116981899861689899999997357746996034 Q ss_pred CC Q ss_conf 23 Q gi|254780768|r 75 ID 76 (281) Q Consensus 75 V~ 76 (281) .. T Consensus 82 ~~ 83 (338) T d1orra_ 82 QV 83 (338) T ss_dssp CC T ss_pred CC T ss_conf 32 No 97 >d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]} Probab=26.60 E-value=7.1 Score=16.50 Aligned_cols=47 Identities=28% Similarity=0.299 Sum_probs=42.1 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH Q ss_conf 03589999999997697482112225242035433455465323478 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR 152 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~ 152 (281) -..|+.+..+.|.++|+.=++..+++...=++.|.+...-|++++.- T Consensus 6 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~ 52 (69) T d2fq4a1 6 QKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVV 52 (69) T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCSSHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHH T ss_conf 99999999999998392407799999997858879999987999999 No 98 >d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]} Probab=26.36 E-value=16 Score=14.08 Aligned_cols=49 Identities=20% Similarity=0.195 Sum_probs=42.8 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) -+.||.+-...|.++|+.=++..++....=++.|-+...-|++.+.-.- T Consensus 7 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~~~ 55 (75) T d3c07a1 7 RALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNAYYYFAGKEHLIQG 55 (75) T ss_dssp HHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHHHHHHCSSHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 9999999999999749140779999998793987999898599999999 No 99 >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Probab=26.36 E-value=16 Score=14.08 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=26.2 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 39999779803899999999789978999954 Q gi|254780768|r 3 RLLIIAGSGMLPYYVAKAARLKNDEPVIASVL 34 (281) Q Consensus 3 kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~ 34 (281) ||++| |.|.+=.-.|-.+..+|++++.+... T Consensus 2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n 32 (202) T d1mv8a2 2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVS 32 (202) T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSC T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCEEEEECC T ss_conf 89998-98884999999999589938999698 No 100 >d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]} Probab=25.60 E-value=16 Score=14.21 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=40.6 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 358999999999769748211222524203543345546532347889 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) +.||.+-.+.|.+.|+. .+..++....=++.|.+...=+++++.-.- T Consensus 4 ~~Il~aA~~l~~~~G~~-~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~ 50 (70) T d2hkua1 4 DALFTAATELFLEHGEG-VPITQICAAAGAHPNQVTYYYGSKERLFVE 50 (70) T ss_dssp HHHHHHHHHHHHHHCTT-SCHHHHHHHHTCCHHHHHHHHSSHHHHHHH T ss_pred HHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCHHHHHHCCCCHHHHHHH T ss_conf 99999999998761357-449999988788853687308999999999 No 101 >d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} Probab=25.56 E-value=17 Score=13.98 Aligned_cols=114 Identities=13% Similarity=0.038 Sum_probs=68.8 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCE-EEEEECCCCCCCCCC-------C---CEEE---EEHHHHHHHHHHHHHCCCC Q ss_conf 739999779803899999999789978-999954866731038-------8---5678---7389999999999864954 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEP-VIASVLNECSFDWQD-------F---ECRE---LPLGDFCVLRSILHQYNIG 67 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~-~ii~l~~~~~~~~~~-------~---~~~~---~~ig~ig~li~~Lk~~~i~ 67 (281) .++|||+-+|.+-..++..+..+|..+ +++.+-++++....+ . ...- -.+++..+.++..++..-+ T Consensus 21 G~valiSqSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~~~~d~l~~l~~D~~t~~i~l~~E~~~~~~~f~~~~r~~~~~ 100 (161) T d2csua2 21 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKK 100 (161) T ss_dssp CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCCSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHHHHH T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC T ss_conf 99999978789999999999857997259994598501689999999734799857899722785999999999887525 Q ss_pred EEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHH Q ss_conf 06770242321000111026035789999998751048035899999999976974821122 Q gi|254780768|r 68 RIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHE 129 (281) Q Consensus 68 ~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~ 129 (281) +-+.+-+.-+.+.-. ..+. ---.. .-|++.... ..|++.|+.+...-+ T Consensus 101 Kpvv~~k~G~s~~g~---------~aa~-sHtga-~ag~~~~~~---a~~~~aGvi~v~~~~ 148 (161) T d2csua2 101 KPIIALKAGKSESGA---------RAAS-SHTGS-LAGSWKIYE---AAFKQSGVLVANTID 148 (161) T ss_dssp SCEEEEECC-----------------------------CHHHHH---HHHHHTTCEEESSHH T ss_pred CCEEEEEEECCCCCC---------CCCC-CCCCC-CCCCHHHHH---HHHHHCCCEEECCHH T ss_conf 870588740341001---------2223-43354-356199999---999977956929999 No 102 >d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=25.24 E-value=9 Score=15.81 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=11.6 Q ss_pred EECCCCHHHHHHHHHCCCEE Q ss_conf 10662799999999849909 Q gi|254780768|r 226 DLPSIGAKTVQNVIKAGLAG 245 (281) Q Consensus 226 DlP~IG~~Ti~~~~~ag~~g 245 (281) +.|-||+.|++.+.+||+.. T Consensus 7 ~~~Gig~~~~~kL~~aG~~T 26 (64) T d1szpa1 7 QVNGITMADVKKLRESGLHT 26 (64) T ss_dssp CCTTCCHHHHHHHHTTSCCS T ss_pred HHCCCCHHHHHHHHHCCCCC T ss_conf 57799999999999969974 No 103 >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Probab=25.19 E-value=17 Score=13.94 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=40.3 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEE-CCC Q ss_conf 73999977980389999999978997899995486673103885678738999999999986495406770-242 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVA-GAI 75 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivma-G~V 75 (281) +|+-|..|+|-+=..+++.+.++|+.+.++.+.-......+.+. ....++..+.+.+ ...++.++.+ |.. T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~---~~~~d~~~~~~~~-~~~~d~vi~~~g~~ 73 (212) T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLD---NPVGPLAELLPQL-DGSIDTAFCCLGTT 73 (212) T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEE---CCBSCHHHHGGGC-CSCCSEEEECCCCC T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCC---CCCCCHHHHHHCC-CCCHHEEEEEEEEE T ss_conf 98999889848999999999968895799997178133204323---4432101222203-43400145443110 No 104 >d1vkma_ c.138.1.1 (A:) Hypothetical protein TM1464 {Thermotoga maritima [TaxId: 2336]} Probab=25.02 E-value=17 Score=13.92 Aligned_cols=148 Identities=14% Similarity=0.234 Sum_probs=74.5 Q ss_pred HHHHHHHHCCCCEEEEEECCCC------CCCCC---CCCEEEEEHHHHH--------------HHHHHHHHCCCCEEEE- Q ss_conf 9999999789978999954866------73103---8856787389999--------------9999998649540677- Q gi|254780768|r 16 YVAKAARLKNDEPVIASVLNEC------SFDWQ---DFECRELPLGDFC--------------VLRSILHQYNIGRIVV- 71 (281) Q Consensus 16 ~ia~~~~~~g~~~~ii~l~~~~------~~~~~---~~~~~~~~ig~ig--------------~li~~Lk~~~i~~ivm- 71 (281) .+-+..+.+|--|-.+++.+.. +.+++ +....-++-.+++ ..+..-+..||+=.+= T Consensus 44 ~~e~~vr~~Ga~PAtiai~~G~~~vGl~~~ele~la~~~~~K~s~rdl~~~~a~~~~gaTTVsaTm~iA~~aGI~VFaTG 123 (292) T d1vkma_ 44 RAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREGADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTG 123 (292) T ss_dssp HHHHHHHHHTCEEEEEEEETTEEEESCCHHHHHHHHHHCCEEECGGGHHHHHHHTCCEEECHHHHHHHHHHHTCCEEECS T ss_pred HHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEC T ss_conf 99999997798632488888864416899999998624330024225899973265663119999999985797089864 Q ss_pred -ECCCCCCCCHHHHCCCHHHHHHHHHHHHHH----HCCCCHHH--HHHHHHHHHHCCCEEECHH-HCCHHHCCCCCCCCC Q ss_conf -024232100011102603578999999875----10480358--9999999997697482112-225242035433455 Q gi|254780768|r 72 -AGAIDRRPNVQDLCFSIKDSLRISKMIWQL----VSGGNAAI--LKASIDLLESYGVSVVGAH-EIVPELLVQVGSLGT 143 (281) Q Consensus 72 -aG~V~krP~~~~l~~D~~~~~~l~k~l~~~----~~~gDd~i--L~~i~~~fe~~G~~vi~~~-~~l~~ll~~~G~l~~ 143 (281) +|+|. |- -+|...|+.. |.+. .--|--+| +..-.+++|..|+.|++.+ +.+|.++....-+.- T Consensus 124 GIGGVH-r~-----s~DiSaDL~e---L~~tpv~vVcaG~KsiLDi~~TlE~LET~gV~Vvgy~t~~fPaF~~~~Sg~~~ 194 (292) T d1vkma_ 124 GTGGVH-PG-----RVDVSQDLTE---MSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRV 194 (292) T ss_dssp CBCCBC-TT-----SSCBCHHHHH---HTTCCEEEEESBBCTTSCHHHHHHHHHHTTCCEEEESCSBCCBTTBSCCSCBC T ss_pred CCCCCC-CC-----CCCCCCCHHH---HHCCCEEEEECCCHHHCCCHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCC T ss_conf 734655-78-----8655533766---72387589922617650547789998746716996068865401016789877 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC Q ss_conf 4653234788998999999733267225999819 Q gi|254780768|r 144 CVPNRDVKRDILAAMKSAEALSELDVGQSAVSIG 177 (281) Q Consensus 144 ~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~ 177 (281) |. ..+.+-..++.+....+....+++|.| T Consensus 195 --~~---v~~~~eiA~i~~~~~~lgl~~giLvan 223 (292) T d1vkma_ 195 --PR---IENVEEVLKIYESMKEMELEKTLMVLN 223 (292) T ss_dssp --CE---ECSHHHHHHHHHHHHHTTCCSEEEEEC T ss_pred --CC---CCCHHHHHHHHHHHHHCCCCCEEEEEC T ss_conf --77---499999999999999718986289978 No 105 >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Probab=24.91 E-value=17 Score=13.90 Aligned_cols=111 Identities=12% Similarity=0.133 Sum_probs=61.9 Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-----------C----CCCCCEEEEE-----------HHHHHHHHHHHH Q ss_conf 7980389999999978997899995486673-----------1----0388567873-----------899999999998 Q gi|254780768|r 9 GSGMLPYYVAKAARLKNDEPVIASVLNECSF-----------D----WQDFECRELP-----------LGDFCVLRSILH 62 (281) Q Consensus 9 G~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~-----------~----~~~~~~~~~~-----------ig~ig~li~~Lk 62 (281) |.-+|-..++.++..+++.++.+........ . +.......+. -..+-.+++.+. T Consensus 48 GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~ 127 (213) T d1l8qa2 48 GKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLY 127 (213) T ss_dssp SHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 39999999998744676504884437879999999871662667898762130101126550586577889999999876 Q ss_pred HCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHCCCEE Q ss_conf 64954067702423210001110260357899999-987510480358999999999769748 Q gi|254780768|r 63 QYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKM-IWQLVSGGNAAILKASIDLLESYGVSV 124 (281) Q Consensus 63 ~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~-l~~~~~~gDd~iL~~i~~~fe~~G~~v 124 (281) .++. .+++++.-. ...+....+|+++ |+... ...+ .-.|+..++.+...+++.|+.+ T Consensus 128 ~~~~-~iiits~~~-p~~l~~~~~dL~S--RL~~g~~~~i-~p~d~~~~~iL~~~a~~rgl~l 185 (213) T d1l8qa2 128 LLEK-QIILASDRH-PQKLDGVSDRLVS--RFEGGILVEI-ELDNKTRFKIIKEKLKEFNLEL 185 (213) T ss_dssp HTTC-EEEEEESSC-GGGCTTSCHHHHH--HHHTSEEEEC-CCCHHHHHHHHHHHHHHTTCCC T ss_pred HCCC-EEEEECCCC-CHHCCCCCHHHHH--HHHCCEEEEE-CCCCHHHHHHHHHHHHHCCCCC T ss_conf 3166-389954875-1001343267888--8618568997-8882799999999999829999 No 106 >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Probab=24.83 E-value=17 Score=13.89 Aligned_cols=166 Identities=9% Similarity=0.004 Sum_probs=86.7 Q ss_pred CEEEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCC--CEEEEE---HHHHHHHHHHHHHC--CCCEEEEE Q ss_conf 739999779-8038999999997899789999548667310-388--567873---89999999999864--95406770 Q gi|254780768|r 2 KRLLIIAGS-GMLPYYVAKAARLKNDEPVIASVLNECSFDW-QDF--ECRELP---LGDFCVLRSILHQY--NIGRIVVA 72 (281) Q Consensus 2 ~kigIIAG~-G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~-~~~--~~~~~~---ig~ig~li~~Lk~~--~i~~ivma 72 (281) +|.+||-|. +-+=..+++.+...|.+++++....+.-... +.. .....+ ..++.++++...++ .++-+|-. T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn 84 (242) T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY 84 (242) T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 98999938888899999999998799999997987899999997298499995699999999999999855996099988 Q ss_pred CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH Q ss_conf 24232100011102603578999999875104803589999999997697482112225242035433455465323478 Q gi|254780768|r 73 GAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR 152 (281) Q Consensus 73 G~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~ 152 (281) -.+.....+.+...+ . ..+.+ ...-.+--.+.+.+...+.+++-..+-...-. .....++... ...+|... T Consensus 85 AG~~~~~~~~~~~~~--~---~~~~~-~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~-Y~asKaal- 155 (242) T d1ulsa_ 85 AGITRDNFHWKMPLE--D---WELVL-RVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQAN-YAASMAGV- 155 (242) T ss_dssp CCCCCCCCGGGCCHH--H---HHHHH-HHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHH-HHHHHHHH- T ss_pred CCCCCCCCHHHCCCH--H---HHCCC-CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC-CCCCCCCCCC-HHHHHHHH- T ss_conf 744456853207601--1---10011-22200445443202332333332100012131-0137778751-59899999- Q ss_pred HHHHHHHHHHHHCCCCCEEEEEEEC Q ss_conf 8998999999733267225999819 Q gi|254780768|r 153 DILAAMKSAEALSELDVGQSAVSIG 177 (281) Q Consensus 153 dI~~g~~i~~~l~~~DiGQsvVv~~ 177 (281) ..+-..++.++++..|-=-+|.-+ T Consensus 156 -~~ltk~lA~ela~~gIrVN~I~PG 179 (242) T d1ulsa_ 156 -VGLTRTLALELGRWGIRVNTLAPG 179 (242) T ss_dssp -HHHHHHHHHHHGGGTEEEEEEEEC T ss_pred -HHHHHHHHHHHHHHCCEEEEEEEC T ss_conf -999999999974659389998417 No 107 >d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]} Probab=24.65 E-value=16 Score=14.13 Aligned_cols=48 Identities=21% Similarity=0.211 Sum_probs=42.2 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 358999999999769748211222524203543345546532347889 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) ..|+.+-.+.|.++|+.=++..++....=++.|.+...-|++++.-.- T Consensus 7 ~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~y~~F~~K~~l~~~ 54 (72) T d1pb6a1 7 KAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIA 54 (72) T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHHHHHHSSSHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 999999999999859250679999998697867999888699999999 No 108 >d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]} Probab=24.62 E-value=18 Score=13.87 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=42.9 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) -..||.+-...|.+.|+.=++..++....=++.|-+...-|++++.-.- T Consensus 13 r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~~K~~L~~~ 61 (81) T d1rkta1 13 QAEILEAAKTVFKRKGFELTTMKDVVEESGFSRGGVYLYFSSTEEMFRR 61 (81) T ss_dssp HHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCSCHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 9999999999999859251779999998694988998888499999999 No 109 >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Probab=24.42 E-value=18 Score=13.84 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=37.3 Q ss_pred CCEEEEEECCCC-H---HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 973999977980-3---899999999789978999954866731038856787389999999999864954067702 Q gi|254780768|r 1 MKRLLIIAGSGM-L---PYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG 73 (281) Q Consensus 1 M~kigIIAG~G~-L---P~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG 73 (281) |+||||=-=-+. . -....+.+.+.|.+.++.++-.- ..+..++ ...+..+++..++.+.+-++=+. T Consensus 2 ~~~LGiSvY~~~~~~e~~~~yi~~a~~~Gf~~iFTSL~~~-e~~~~~~------~~~~~~l~~~a~~~g~~vi~DIs 71 (244) T d1x7fa2 2 ERKLGISLYPEHSTKEKDMAYISAAARHGFSRIFTCLLSV-NRPKEEI------VAEFKEIINHAKDNNMEVILDVA 71 (244) T ss_dssp CCEEEEEECGGGSCHHHHHHHHHHHHTTTEEEEEEEECCC---------------HHHHHHHHHHHHTTCEEEEEEC T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CCCHHHH------HHHHHHHHHHHHHCCCEEEEECC T ss_conf 7336899716999879999999999987998897137667-8887899------99999999999987999999868 No 110 >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Probab=24.41 E-value=18 Score=13.84 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=28.1 Q ss_pred CEEEEEECCC---CHHHHHHHHHHHCCCCEEEEEE Q ss_conf 7399997798---0389999999978997899995 Q gi|254780768|r 2 KRLLIIAGSG---MLPYYVAKAARLKNDEPVIASV 33 (281) Q Consensus 2 ~kigIIAG~G---~LP~~ia~~~~~~g~~~~ii~l 33 (281) +|++||.|.| -+=..+|+.+-+.|.++++... T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~ 36 (329) T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW 36 (329) T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 95899969999972999999999986998999707 No 111 >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Probab=24.25 E-value=18 Score=13.82 Aligned_cols=28 Identities=18% Similarity=0.064 Sum_probs=24.6 Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEE Q ss_conf 9997798038999999997899789999 Q gi|254780768|r 5 LIIAGSGMLPYYVAKAARLKNDEPVIAS 32 (281) Q Consensus 5 gIIAG~G~LP~~ia~~~~~~g~~~~ii~ 32 (281) +||-|+|.==..+|..+.++|.++.++- T Consensus 10 vIVVGsG~aG~v~A~rLaeaG~~VlvLE 37 (370) T d3coxa1 10 ALVIGSGYGGAVAALRLTQAGIPTQIVE 37 (370) T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEE T ss_conf 9997847899999999987879399996 No 112 >d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]} Probab=24.14 E-value=14 Score=14.49 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=42.5 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHH Q ss_conf 3589999999997697482112225242035433455465323478899 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDIL 155 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~ 155 (281) ..||.+..+.|.++|+.=++..++....=++.|.+...-+++++.-.-. T Consensus 6 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~~K~~L~~~~ 54 (73) T d1t56a1 6 LAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTL 54 (73) T ss_dssp HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHH T ss_conf 9999999999997591507799999986988889988884999999999 No 113 >d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]} Probab=24.10 E-value=12 Score=14.91 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=41.3 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 35899999999976974821122252420354334554653234788 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) +.||.+....|.++|++=++..++....=+++|-+...=|++++.-. T Consensus 7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F~~K~~L~~ 53 (74) T d1v7ba1 7 EMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHFPSRHALLL 53 (74) T ss_dssp HHHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHHHHHCSSHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHH T ss_conf 99999999999985956357999998849692238550799999999 No 114 >d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]} Probab=23.66 E-value=16 Score=14.12 Aligned_cols=49 Identities=10% Similarity=0.139 Sum_probs=43.0 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHH Q ss_conf 0358999999999769748211222524203543345546532347889 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDI 154 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI 154 (281) -+.|+.+-.+.|.++|+.-++..++....=.+.|.+...-|++.+...- T Consensus 7 r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~ 55 (75) T d2hyja1 7 RGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQIS 55 (75) T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHTTCSSHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH T ss_conf 9999999999999759030769999998890989998888299999999 No 115 >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Probab=23.42 E-value=18 Score=13.72 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=23.8 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC Q ss_conf 973999977980389999999978997899995486 Q gi|254780768|r 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNE 36 (281) Q Consensus 1 M~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~ 36 (281) |+|++|| |+|.==+..|..+.+.|...-++.++.. T Consensus 4 ~KrVaII-GaG~sGl~~A~~L~~~~~~~~v~vfEk~ 38 (335) T d2gv8a1 4 IRKIAII-GAGPSGLVTAKALLAEKAFDQVTLFERR 38 (335) T ss_dssp CCEEEEE-CCSHHHHHHHHHHHTTTCCSEEEEECSS T ss_pred CCEEEEE-CCCHHHHHHHHHHHHHCCCCCEEEEECC T ss_conf 9869998-9599999999999982989988999789 No 116 >d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]} Probab=23.13 E-value=13 Score=14.68 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=41.9 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 35899999999976974821122252420354334554653234788 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) ..|+.+-...|.++|+.=++..++....=++.|-+...-|++++... T Consensus 10 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~y~~F~sKe~L~~ 56 (78) T d2o7ta1 10 EHIITTTCNLYRTHHHDSLTMENIAEQAGVGVATLYRNFPDRFTLDM 56 (78) T ss_dssp HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH T ss_conf 99999999999984914067999998839988799998869999999 No 117 >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Probab=22.98 E-value=19 Score=13.66 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=44.1 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCCCCC---CCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 7399997798038999999997899-7899995486673103---8856787389999999999864954067702423 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKND-EPVIASVLNECSFDWQ---DFECRELPLGDFCVLRSILHQYNIGRIVVAGAID 76 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~-~~~ii~l~~~~~~~~~---~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~ 76 (281) =||=|..|+|-+=..+++.+.++|+ +++.+.........+. ++.+...++..-..+.+...+ +++.|+-+.... T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~-~~d~Vih~a~~~ 78 (342) T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-KCDVVLPLVAIA 78 (342) T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-HCSEEEECBCCC T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCCCCCC T ss_conf 979998987589999999999779988999968972446653689809997805785999999985-898211433332 No 118 >d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]} Probab=22.94 E-value=19 Score=13.66 Aligned_cols=88 Identities=15% Similarity=0.044 Sum_probs=52.5 Q ss_pred HHHHHHHHHHHHH---HHCCCCCEEEEEEECCEEEEEECCC--C--------HHHHHHHHHHHHHHCCCCCCCCEEEEEE Q ss_conf 4788998999999---7332672259998197488962534--2--------1799999997543123456677189993 Q gi|254780768|r 150 VKRDILAAMKSAE---ALSELDVGQSAVSIGGRVVALEGIE--G--------TDSMLQRIVDCRNNGRILAGKSGVLVKM 216 (281) Q Consensus 150 ~~~dI~~g~~i~~---~l~~~DiGQsvVv~~g~ViaiEa~e--G--------TD~mi~R~~~~~~~~~~~~~~~~ilvK~ 216 (281) +..-.+.++..++ .-+..-|| +|||.+|.|||.---. | --..|.++....... .-.+.+++=+ T Consensus 7 ~e~~M~~Ai~~A~~a~~~~~~pvG-aViv~~g~Iia~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~---~l~~~~lytT 82 (156) T d1z3aa1 7 HEYWMRHALTLAKRAWDEREVPVG-AVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNY---RLIDATLYVT 82 (156) T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCE-EEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSS---CCTTCEEEEE T ss_pred HHHHHHHHHHHHHHHCCCCCCCEE-EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC---CCCCCEEEEC T ss_conf 999999999999985458989899-999989908999601114557540567777677777531365---5457446402 Q ss_pred CCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCC Q ss_conf 488875312106627999999998499099997397 Q gi|254780768|r 217 CKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGK 252 (281) Q Consensus 217 ~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~ 252 (281) .-|- |--...+..+|++-++..+.. T Consensus 83 ~ePC-----------~mC~~aii~~gI~rVvyg~~d 107 (156) T d1z3aa1 83 LEPC-----------VMCAGAMIHSRIGRVVFGARD 107 (156) T ss_dssp ECCC-----------HHHHHHHHHHTCSEEEEEECC T ss_pred CCCC-----------CCHHHHHHHHCCCEEEEEEEC T ss_conf 5665-----------432658987377657997523 No 119 >d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]} Probab=22.91 E-value=9.5 Score=15.66 Aligned_cols=47 Identities=19% Similarity=0.050 Sum_probs=41.5 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHH Q ss_conf 03589999999997697482112225242035433455465323478 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKR 152 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~ 152 (281) -..|+.+..+.|.++||.=++..++....=++.|.+...-|++++.- T Consensus 8 r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~iY~~F~~k~~L~ 54 (68) T d2id3a1 8 REAVLLAAGDALAADGFDALDLGEIARRAGVGKTTVYRRWGTPGGLA 54 (68) T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHHCSHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHH T ss_conf 99999999999998493407799999997868879999985999999 No 120 >d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]} Probab=22.67 E-value=11 Score=15.12 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=41.4 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 35899999999976974821122252420354334554653234788 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) +.||.+-.+.|.++|+.=++..++....=+++|-+...=|++++... T Consensus 7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~iY~~F~sK~~L~~ 53 (74) T d2g7sa1 7 DDILQCARTLIIRGGYNSFSYADISQVVGIRNASIHHHFPSKSDLVC 53 (74) T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHCCCHHHHHHHCSSHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHH T ss_conf 99999999999985915067999999878184169888839999999 No 121 >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} Probab=22.37 E-value=19 Score=13.58 Aligned_cols=180 Identities=15% Similarity=0.035 Sum_probs=76.4 Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCHHHHH Q ss_conf 38999999997899789999548667310388567873899999999998649540677024232100011102603578 Q gi|254780768|r 13 LPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSL 92 (281) Q Consensus 13 LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~ 92 (281) -|..+.+.+...|.++..+.... .+.+.. .-...++.++++..+.-|+..++.......++ .... T Consensus 51 ~~~~~k~~l~~~gl~i~~l~~~~----~~~~~~--~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~---------~~~~ 115 (271) T d2q02a1 51 NYNQVRNLAEKYGLEIVTINAVY----PFNQLT--EEVVKKTEGLLRDAQGVGARALVLCPLNDGTI---------VPPE 115 (271) T ss_dssp CHHHHHHHHHHTTCEEEEEEEET----TTTSCC--HHHHHHHHHHHHHHHHHTCSEEEECCCCSSBC---------CCHH T ss_pred CHHHHHHHHHHCCCCEEEEECCC----CCCCCC--HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC---------CHHH T ss_conf 79999999998399478741244----568877--78899999999999982996899935887762---------0088 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE Q ss_conf 99999987510480358999999999769748211222524203543345546532347889989999997332672259 Q gi|254780768|r 93 RISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAAMKSAEALSELDVGQS 172 (281) Q Consensus 93 ~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQs 172 (281) .+ -.-|+.+.++.++.|+++.=- .+ +..+ ....+..-+..+++..+. ++|- T Consensus 116 ~~------------~~~l~~l~~~a~~~gv~l~lE-~~--------~~~~------~~~~~~~~~~~li~~~~~-~~g~- 166 (271) T d2q02a1 116 VT------------VEAIKRLSDLFARYDIQGLVE-PL--------GFRV------SSLRSAVWAQQLIREAGS-PFKV- 166 (271) T ss_dssp HH------------HHHHHHHHHHHHTTTCEEEEC-CC--------CSTT------CSCCCHHHHHHHHHHHTC-CCEE- T ss_pred HH------------HHHHHHHHHHHCCCCEEEEEE-EC--------CCCC------CCCCCHHHHHHHHHHHCC-CCCE- T ss_conf 99------------999999988735278289996-16--------7767------653889999999997288-6310- Q ss_pred EEEECCEEEEEECCCCHH--HHHHHHHHHHHHCCCCCCCCEEEEEECCCCC-------CCEEEECCCC----HHHHHHHH Q ss_conf 998197488962534217--9999999754312345667718999348887-------5312106627----99999999 Q gi|254780768|r 173 AVSIGGRVVALEGIEGTD--SMLQRIVDCRNNGRILAGKSGVLVKMCKSQQ-------DMRADLPSIG----AKTVQNVI 239 (281) Q Consensus 173 vVv~~g~ViaiEa~eGTD--~mi~R~~~~~~~~~~~~~~~~ilvK~~K~~Q-------D~r~DlP~IG----~~Ti~~~~ 239 (281) +..-++. ...|.+ .++... ..+. -.-|=+|-..... ..|.-.|--| +..++.+. T Consensus 167 -~~D~~H~----~~~g~~~~~~~~~l--~~~~------i~~vH~~d~~~~~~~~~~~~~~r~~~~G~G~id~~~i~~~L~ 233 (271) T d2q02a1 167 -LLDTFHH----HLYEEAEKEFASRI--DISA------IGLVHLSGVEDTRPTEALADEQRIMLSEKDVMQNYQQVQRLE 233 (271) T ss_dssp -EEEHHHH----HHCTTHHHHHHHHC--CGGG------EEEEEECBCCCCSCGGGCCGGGCBCCCTTCSSCHHHHHHHHH T ss_pred -ECCCHHH----HHCCCCHHHHHHHH--CCCC------EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH T ss_conf -0230668----87089869999883--7381------999998738888864311356231159996347999999999 Q ss_pred HCCCEEE-EEE Q ss_conf 8499099-997 Q gi|254780768|r 240 KAGLAGI-ALE 249 (281) Q Consensus 240 ~ag~~gi-aie 249 (281) ++|++|- .+| T Consensus 234 ~~GY~G~~s~E 244 (271) T d2q02a1 234 NMGYRGIYAFE 244 (271) T ss_dssp HTTCCSCEEEC T ss_pred HCCCCCCEEEE T ss_conf 80998518999 No 122 >d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]} Probab=21.65 E-value=11 Score=15.28 Aligned_cols=48 Identities=13% Similarity=0.139 Sum_probs=41.4 Q ss_pred CHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 035899999999976974821122252420354334554653234788 Q gi|254780768|r 106 NAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRD 153 (281) Q Consensus 106 Dd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~d 153 (281) ...||.+-.+.|.++||.=++..+++...=+++|-+...=+++++.-. T Consensus 2 re~iL~aA~~lf~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~~K~~L~~ 49 (69) T d2i10a1 2 DQVALQTAMELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFE 49 (69) T ss_dssp CHHHHHHHHHHHHHHTTTTCCHHHHHHHHTCCHHHHHHHHCSHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHH T ss_conf 999999999999987906277999999868786299888859999999 No 123 >d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]} Probab=21.54 E-value=17 Score=13.93 Aligned_cols=47 Identities=28% Similarity=0.282 Sum_probs=39.9 Q ss_pred HHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCC-HHHHHH Q ss_conf 35899999999976974821122252420354334554653-234788 Q gi|254780768|r 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPN-RDVKRD 153 (281) Q Consensus 107 d~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~-~~~~~d 153 (281) +.|+.+-.+.|.++|++=++..++..+.=++.|.+...-|+ +++.-. T Consensus 5 ~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~iy~~F~~~Ke~L~~ 52 (73) T d1sgma1 5 EKILHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFFPNGKEELAI 52 (73) T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCSCHHHHSTTTCHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHH T ss_conf 999999999999849241779999998688877999985998999999 No 124 >d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4 [TaxId: 10665]} Probab=21.38 E-value=20 Score=13.45 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=39.1 Q ss_pred CCEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECHHHC Q ss_conf 771899934888753121066279999999984990999973977998589999999987968999577545 Q gi|254780768|r 209 KSGVLVKMCKSQQDMRADLPSIGAKTVQNVIKAGLAGIALEAGKSLVLEKELVKKHADEAGIFVCGIDREFA 280 (281) Q Consensus 209 ~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~~~~ag~~giaiea~~~lild~~~~i~~a~~~~i~i~g~~~~~~ 280 (281) .+++++-+.-|= +.-.+.+..+|++-++.....- -+.....++.+++||-+..+..++. T Consensus 121 ~~~~ly~t~~PC-----------~~Ca~~i~~~gI~~V~~~~~~~--~~~~~~~~~l~~~gI~v~~i~~~~~ 179 (193) T d1vq2a_ 121 EGATMYVTLSPC-----------PDCAKAIAQSGIKKLVYCETYD--KNKPGWDDILRNAGIEVFNVPKKNL 179 (193) T ss_dssp TTCEEEEEECCC-----------HHHHHHHHHHTCCEEEEEECCT--TCCTTTTHHHHHTTCEEEECCGGGC T ss_pred CCCEEEECCCCC-----------HHHHHHHHHCCCCEEEEEECCC--CCCHHHHHHHHHCCCEEEECCHHHH T ss_conf 775477258996-----------7899999851578899972799--8547899999987998995399999 No 125 >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Probab=21.12 E-value=20 Score=13.41 Aligned_cols=55 Identities=9% Similarity=-0.098 Sum_probs=21.8 Q ss_pred HHHHHHHCCCCEEEEEECC-CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 9999997899789999548-66731038856787389999999999864954067702 Q gi|254780768|r 17 VAKAARLKNDEPVIASVLN-ECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAG 73 (281) Q Consensus 17 ia~~~~~~g~~~~ii~l~~-~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG 73 (281) ..+.++..|.+.+-+.+.= .-++.-..+... ....+.++++..+++|+.=++=.| T Consensus 41 ~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~--~~~~l~~~l~~a~~~Gl~vil~~g 96 (354) T d1tg7a5 41 IFEKVKALGFNCVSFYVDWALLEGNPGHYSAE--GIFDLQPFFDAAKEAGIYLLARPG 96 (354) T ss_dssp HHHHHHTTTCCEEEEECCHHHHCSBTTBCCCC--GGGCSHHHHHHHHHHTCEEEEECC T ss_pred HHHHHHHCCCCEEEEECCHHCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEECCC T ss_conf 99999972998899854221048989860453--146699999999975998997688 No 126 >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Probab=20.81 E-value=21 Score=13.37 Aligned_cols=74 Identities=14% Similarity=0.057 Sum_probs=50.9 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCC--------CCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 739999779803899999999789978999954866731--------038856787389999999999864954067702 Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFD--------WQDFECRELPLGDFCVLRSILHQYNIGRIVVAG 73 (281) Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~--------~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG 73 (281) +|+=|..|+|-+=..+++.+.++|++++.+......... .+++.+...++.+...+.+.+.......++.+. T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321) T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321) T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCC T ss_conf 98999788878999999999978398999989997651777987333689589975056857754311033322222333 Q ss_pred CC Q ss_conf 42 Q gi|254780768|r 74 AI 75 (281) Q Consensus 74 ~V 75 (281) .. T Consensus 81 ~~ 82 (321) T d1rpna_ 81 AQ 82 (321) T ss_dssp SC T ss_pred CC T ss_conf 33 No 127 >d1r89a3 d.58.16.2 (A:258-437) tRNA nucleotidyltransferase, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=20.78 E-value=21 Score=13.37 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=57.7 Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHH- Q ss_conf 9999999864954067702423210001110260357899999987510480358999999999769748211222524- Q gi|254780768|r 55 CVLRSILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPE- 133 (281) Q Consensus 55 g~li~~Lk~~~i~~ivmaG~V~krP~~~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~- 133 (281) ..+.+.|++++-.-++. .+ +.|.+ ..|...+++ ++ ..+++.+.++++||+|+.+.-...+ T Consensus 8 ~~i~~~l~~Rgt~~~~v--~f-~~pd~-------vdDil~pQl-----~R----~~~sl~~~Le~~GF~Vlrs~~~~de~ 68 (180) T d1r89a3 8 ERLRKIVEERGTAVFAV--KF-RKPDI-------VDDNLYPQL-----ER----ASRKIFEFLERENFMPLRSAFKASEE 68 (180) T ss_dssp HHHHHHHHHHTCEEEEE--EE-ECCSC-------CHHHHHHHH-----HH----HHHHHHHHHHHTTCCEEEEEEEECSS T ss_pred HHHHHHHHHCCCEEEEE--EE-CCCCC-------CCCCHHHHH-----HH----HHHHHHHHHHHCCCEEEEEEEEECCC T ss_conf 99999998679669999--94-89999-------853225899-----99----99999999998799899878874698 Q ss_pred ---HCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCHHH Q ss_conf ---2035--------433455465323478899899999973326722599981974889625342179 Q gi|254780768|r 134 ---LLVQ--------VGSLGTCVPNRDVKRDILAAMKSAEALSELDVGQSAVSIGGRVVALEGIEGTDS 191 (281) Q Consensus 134 ---ll~~--------~G~l~~~~p~~~~~~dI~~g~~i~~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~ 191 (281) ++.. .-...++..... +++-+...+ .+. =++=|.+|++.+..-..=|++ T Consensus 69 ~~~ll~El~~~~lp~v~~h~GPpv~~~-----~~~~kFi~k---~~~-~g~~I~~gRl~~~~~Rky~~a 128 (180) T d1r89a3 69 FCYLLFECQIKEISRVFRRMGPQFEDE-----RNVKKFLSR---NRA-FRPFIENGRWWAFEMRKFTTP 128 (180) T ss_dssp EEEEEEEESCSCCCSEEEEEEEETTCH-----HHHHHHHHS---CCS-SCCEEETTEEEEEEECSCSSH T ss_pred EEEEEEEEEECCCCCCEEECCCCCCCC-----CHHHHHHHH---CCC-CCCEEECCEEEEEEEEEECCH T ss_conf 799999974054567263029596210-----228888773---576-686288999999997750789 No 128 >d1b22a_ a.60.4.1 (A:) DNA repair protein Rad51, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Probab=20.48 E-value=8.6 Score=15.96 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=10.9 Q ss_pred EEECCCCHHHHHHHHHCCCEE Q ss_conf 210662799999999849909 Q gi|254780768|r 225 ADLPSIGAKTVQNVIKAGLAG 245 (281) Q Consensus 225 ~DlP~IG~~Ti~~~~~ag~~g 245 (281) ++.|-||+.|++.+.+||+.. T Consensus 13 L~~~Gig~~~i~kL~~aG~~T 33 (70) T d1b22a_ 13 LEQCGINANDVKKLEEAGFHT 33 (70) T ss_dssp HHHTTCSHHHHHHHHTTCCSS T ss_pred HHHCCCCHHHHHHHHHCCCCH T ss_conf 860899999999999968634 No 129 >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Probab=20.26 E-value=21 Score=13.30 Aligned_cols=63 Identities=13% Similarity=0.156 Sum_probs=39.7 Q ss_pred CEEEEEECC-CC--HHHHHHHHHHHCCCCEEEEEECCCCCC----C-CC-CCCEEEEE---HHHHHHHHHHHHHC Q ss_conf 739999779-80--389999999978997899995486673----1-03-88567873---89999999999864 Q gi|254780768|r 2 KRLLIIAGS-GM--LPYYVAKAARLKNDEPVIASVLNECSF----D-WQ-DFECRELP---LGDFCVLRSILHQY 64 (281) Q Consensus 2 ~kigIIAG~-G~--LP~~ia~~~~~~g~~~~ii~l~~~~~~----~-~~-~~~~~~~~---ig~ig~li~~Lk~~ 64 (281) +|.++|.|. |. +=..+|+.+...|.++++.....+... + +. +....... ..++..+++.+++. T Consensus 6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268) T d2h7ma1 6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268) T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHC T ss_conf 977999799999779999999999869999999698589999999870886026764112332212211001210 Done!