RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780768|ref|YP_003065181.1| hypothetical protein CLIBASIA_03295 [Candidatus Liberibacter asiaticus str. psy62] (281 letters) >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomerase; HET: NAD CDP; 1.50A {Salmonella typhi} (A:) Length = 347 Score = 34.6 bits (76), Expect = 0.014 Identities = 12/55 (21%), Positives = 20/55 (36%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFC 55 M +LLI G G L +A A + + ++ L+ L +F Sbjct: 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFV 55 >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} (A:) Length = 330 Score = 34.6 bits (76), Expect = 0.015 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 2/102 (1%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFEC--RELPLGDFCVLR 58 M +LI G+G + + K + V+ L D L D LR Sbjct: 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLR 60 Query: 59 SILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMIWQ 100 + Q NI ++ A + ++ + Sbjct: 61 DVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLL 102 >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} (A:) Length = 333 Score = 33.3 bits (73), Expect = 0.034 Identities = 7/47 (14%), Positives = 16/47 (34%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECR 47 MK++ I G + ++A+ + D+ V + Sbjct: 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPN 67 >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, GALE, NAD, SYK, UDP, N- acetylglucosamine, N-acetylgalactosamine, UDP-GLC; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} (A:) Length = 352 Score = 32.2 bits (70), Expect = 0.092 Identities = 7/65 (10%), Positives = 16/65 (24%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 K LI +G + + + + + V D + + + I Sbjct: 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFI 86 Query: 61 LHQYN 65 Sbjct: 87 QGDIR 91 >1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical protein, structure 2 function project; 1.64A {Haemophilus influenzae rd KW20} (A:) Length = 144 Score = 30.5 bits (69), Expect = 0.24 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 170 GQSAVSIGGRVVALEGIEGTDS--MLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADL 227 G++ IG ++ L G+E D+ ++ + N RI + ++ KM + Q + +L Sbjct: 17 GETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND---KMNLNVQQAQGEL 73 Query: 228 PSIGAKTVQNVIKAG 242 + T+ + G Sbjct: 74 LIVSQFTLAADTQKG 88 >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, structural genomics, protein structure initiative; HET: NAD; 1.87A {Archaeoglobus fulgidus} (A:1-166) Length = 166 Score = 30.7 bits (67), Expect = 0.24 Identities = 10/86 (11%), Positives = 24/86 (27%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 M +++ G+G + +V N+ VI ++ + + ++ Sbjct: 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDY 60 Query: 61 LHQYNIGRIVVAGAIDRRPNVQDLCF 86 L + A R Sbjct: 61 LKGAEEVWHIAANPDVRIGAENPDEI 86 >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, structural genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} (A:1-198) Length = 198 Score = 30.2 bits (66), Expect = 0.33 Identities = 7/47 (14%), Positives = 14/47 (29%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECR 47 KR+LI G+G + ++ E + + Sbjct: 27 RKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIG 73 >1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} (A:) Length = 145 Score = 30.1 bits (68), Expect = 0.33 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%) Query: 170 GQSAVSIGGRVVALEGIEGTDS--MLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADL 227 G+ IG ++ L G+E D R+ + RI + G KM + Q + Sbjct: 17 GEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG---KMNLNVQQAGGSV 73 Query: 228 PSIGAKTVQNVIKAG 242 + T+ + G Sbjct: 74 LVVSQFTLAADTERG 88 >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* (D:) Length = 337 Score = 29.8 bits (64), Expect = 0.36 Identities = 3/65 (4%), Positives = 14/65 (21%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 + + + SG + ++ + + + ++ Sbjct: 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD 64 Query: 61 LHQYN 65 L Sbjct: 65 LADEG 69 >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} (A:) Length = 206 Score = 29.8 bits (65), Expect = 0.39 Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 1/71 (1%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 +K++ I +G A ++ V V + + + +GD + Sbjct: 3 VKKIAIFGATGQTGLTTLAQA-VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV 61 Query: 61 LHQYNIGRIVV 71 V+ Sbjct: 62 DKTVAGQDAVI 72 >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} (A:1-189) Length = 189 Score = 29.2 bits (63), Expect = 0.65 Identities = 8/46 (17%), Positives = 13/46 (28%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFEC 46 + L+ +G Y+AK K W+ E Sbjct: 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL 59 >2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomics, NPPSFA; 2.76A {Aquifex aeolicus VF5} (A:) Length = 148 Score = 27.8 bits (62), Expect = 1.6 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 170 GQSAVSIGGRVVALEGIEGTDS--MLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADL 227 G+ SI + G+ D+ ++++V+ N RI + G K S D++ ++ Sbjct: 17 GKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERG---KFQYSVLDIKGEI 73 Query: 228 PSIGAKTVQNVIKAG 242 + T+ +K G Sbjct: 74 LVVSQFTLYANVKKG 88 >2ziu_A MUS81 protein; helix-hairpin-helix, alternative splicing, DNA damage, DNA recombination, DNA repair, hydrolase, magnesium; 2.70A {Danio rerio} PDB: 2ziv_A 2ziw_A (A:1-229) Length = 229 Score = 27.3 bits (60), Expect = 2.3 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Query: 43 DFECRELPLGDFCVLR-------SILHQYNIGRIVVAGAIDRRPNVQDLCFSIKD 90 F+ R+L +GDF + + +G+ +V I R + DLC SI D Sbjct: 50 TFDVRKLNVGDFLWVARERVTPVPGQLRPPVGKELVLDYIIERKRMDDLCGSIID 104 >1yqz_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.54A {Staphylococcus aureus} (A:1-113,A:251-315) Length = 178 Score = 27.4 bits (60), Expect = 2.3 Identities = 6/54 (11%), Positives = 17/54 (31%), Gaps = 1/54 (1%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDF 54 M +++++ G+ A R + E I + + + + Sbjct: 1 MPKIVVV-GAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVV 53 >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A (A:) Length = 299 Score = 27.2 bits (58), Expect = 2.4 Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 2/56 (3%) Query: 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNEC--SFDWQDFECRELPLGDFC 55 K +++ G+G VA+ V N + + E+ GD Sbjct: 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD 61 >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} (A:) Length = 227 Score = 27.2 bits (58), Expect = 2.6 Identities = 7/46 (15%), Positives = 16/46 (34%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFEC 46 +K++++I SG + + A + E E + Sbjct: 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK 49 >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} (A:) Length = 321 Score = 27.2 bits (58), Expect = 2.6 Identities = 8/55 (14%), Positives = 21/55 (38%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFC 55 M++++I G+G + ++ +A+ + I + + RE Sbjct: 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV 58 >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} (A:1-125) Length = 125 Score = 27.2 bits (60), Expect = 2.6 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 1/73 (1%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 R++++ GSG L VA + E + + + + D LR + Sbjct: 11 ATRVMLL-GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRV 69 Query: 61 LHQYNIGRIVVAG 73 + IV Sbjct: 70 VELEKPHYIVPEI 82 >2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus HB8} (A:24-146) Length = 123 Score = 27.1 bits (60), Expect = 2.7 Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 16/88 (18%) Query: 64 YNIGRIVVAGAIDR------RPNVQDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLL 117 + +G VA RP L + + L + +LV G A Sbjct: 39 FEVGFRGVAATASDLLAKMGRPLGFTLGLFLPEDLEEGFV-LELVRGAAEA--------A 89 Query: 118 ESYGVSVVGAHEIV-PELLVQVGSLGTC 144 + G ++G E+ + V Sbjct: 90 KRLGAFLLGGDTNRGVEVALTVSGYALA 117 >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} (A:) Length = 215 Score = 26.7 bits (57), Expect = 3.6 Identities = 7/101 (6%), Positives = 22/101 (21%), Gaps = 7/101 (6%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSI 60 KR+L+ +G+ ++ + + + + L + Sbjct: 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKV------IAPARKALAEHPRLDNPVGPLAEL 58 Query: 61 LHQYNIGRIVV-AGAIDRRPNVQDLCFSIKDSLRISKMIWQ 100 L Q + + + + Sbjct: 59 LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK 99 >1h2a_S Hydrogenase; SO ligand, hydrogen metabolism, Mg center, MIR, MAD, oxidoreductase; 1.80A {Desulfovibrio vulgaris str} (S:1-236) Length = 236 Score = 26.6 bits (58), Expect = 4.2 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 7/105 (6%) Query: 69 IVVAGAIDRRPNVQDLCFSIKDSLRISKMI----WQLVSGGNAAILKASIDLLESYGVSV 124 VV G I N + L I I +++ G A + Sbjct: 122 AVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCAT--FGGVQAAKPNPTG 179 Query: 125 V-GAHEIVPELLVQVGSLGTCVPNRDVKRDILAAMKSAEALSELD 168 G ++ + L V+ ++ C PN + +A ELD Sbjct: 180 AKGVNDALKHLGVKAINIAGCPPNPYNLVGTIVYYLKNKAAPELD 224 >3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* (A:1-109,A:286-409) Length = 233 Score = 26.3 bits (57), Expect = 4.6 Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNE 36 M ++L++ G A + V+N+ Sbjct: 1 MTKVLVL-GGRFGALTAAYTLKRLVGSKADVKVINK 35 >3fiw_A Putative TETR-family transcriptional regulator; TETR-family transcriptional regulator streptomyces, structural genomics, PSI-2; 2.20A {Streptomyces coelicolor} (A:1-88) Length = 88 Score = 26.2 bits (58), Expect = 5.7 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAA 157 ++ ++DLL+ G+ V + L V+ SL KRD+L A Sbjct: 28 ETVITEALDLLDEVGLDGVSTRRLAKRLGVEQPSLYWYFRT---KRDLLTA 75 >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} (A:) Length = 246 Score = 25.9 bits (55), Expect = 5.7 Identities = 18/212 (8%), Positives = 49/212 (23%), Gaps = 27/212 (12%) Query: 1 MKRLLII---AGSG--MLPYYVAKAARLKNDEPVIASVLNECSFDW-------------- 41 M + G G M + K N +P+I + + + Sbjct: 1 MSLIYAQILAGGKGTRMGNVSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWM 60 Query: 42 -----QDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISK 96 + ++ + I + + ++ Sbjct: 61 NHAEDNIKKYISDDRIVVIEGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTH 120 Query: 97 MIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILA 156 I + + + HE++ ++ V+ P + + Sbjct: 121 RIIEENIDAALETGAVDTVIEALDTIVESSNHEVITDIPVRDHMYQGQTPQSFNMKKVFN 180 Query: 157 AMKSAEA---LSELDVGQSAVSIGGRVVALEG 185 ++ D + + G V ++G Sbjct: 181 HYQNLTPEKKQILTDACKICLLAGDDVKLVKG 212 >2guh_A Putative TETR-family transcriptional regulator; helix-turn-helix, TETR fold, structural genomics, PSI, protein structure initiative; HET: MSE; 1.52A {Rhodococcus SP} (A:) Length = 214 Score = 25.9 bits (56), Expect = 6.1 Identities = 6/52 (11%), Positives = 17/52 (32%), Gaps = 3/52 (5%) Query: 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAAM 158 + I+ A+ + + +I + V + + K + A+ Sbjct: 42 SLIVDAAGRAFATRPYREITLKDIAEDAGVSAPLIIKYFGS---KEQLFDAL 90 >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} (A:) Length = 253 Score = 26.0 bits (55), Expect = 6.1 Identities = 9/55 (16%), Positives = 21/55 (38%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFC 55 + +L+ SG V K + +D+ V ++ + ++ +GD Sbjct: 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDIT 58 >3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A* (A:) Length = 430 Score = 25.8 bits (54), Expect = 6.2 Identities = 6/31 (19%), Positives = 12/31 (38%) Query: 1 MKRLLIIAGSGMLPYYVAKAARLKNDEPVIA 31 M + +++ G G+ A R + I Sbjct: 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKIT 31 >3klb_A Putative flavoprotein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343} (A:) Length = 162 Score = 25.6 bits (55), Expect = 7.1 Identities = 9/134 (6%), Positives = 32/134 (23%), Gaps = 26/134 (19%) Query: 1 MKRLLIIAGSGMLPY-YVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRS 59 +++L+ S A +A++ ++ + D+ Sbjct: 4 DRKILVAYFS---CSGVTKAVAEK------LAAITGADLYEIKPEVPYTEADLDW----- 49 Query: 60 ILHQYNIGRIVVAGAIDRRPNVQDLCFSIKDSLRISKMI---WQLVSGGNAAILKASIDL 116 + + R + +++ + + I+ ++ Sbjct: 50 ------NDKKSRSSVEXRDALSRPAISGTLFHPEKYEVLFVGFPVWWYIAPTIINTFLES 103 Query: 117 LESYG--VSVVGAH 128 + G V Sbjct: 104 YDFAGKIVVPFATS 117 >3egq_A TETR family transcriptional regulator; NP_070644.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PE8; 2.55A {Archaeoglobus fulgidus} (A:1-69) Length = 69 Score = 25.3 bits (56), Expect = 9.5 Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 3/52 (5%) Query: 107 AAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAAM 158 I++A++ L V EI E V + + K+ +L Sbjct: 7 VRIIEAALRLYXKKPPHEVSIEEIAREAKVSKSLIFYHFES---KQKLLEEA 55 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.321 0.138 0.394 Gapped Lambda K H 0.267 0.0481 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 2,034,347 Number of extensions: 87030 Number of successful extensions: 356 Number of sequences better than 10.0: 1 Number of HSP's gapped: 356 Number of HSP's successfully gapped: 54 Length of query: 281 Length of database: 4,956,049 Length adjustment: 87 Effective length of query: 194 Effective length of database: 2,015,014 Effective search space: 390912716 Effective search space used: 390912716 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 54 (25.2 bits)