HHsearch alignment for GI: 254780770 and conserved domain: cd01287

>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=99.96  E-value=3.2e-28  Score=189.73  Aligned_cols=130  Identities=23%  Similarity=0.252  Sum_probs=106.3

Q ss_pred             CCCCCCEEEEEEEEEEECCC------EEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC---CC-C
Q ss_conf             79997505478999984697------49999982688831313479995022566999986346345443299---77-6
Q gi|254780770|r   20 LPHRYPFLLVDKVVNIQRDE------SAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNG---FD-Q   89 (161)
Q Consensus        20 lPhr~Pfl~ID~i~~~~~g~------~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~---~~-~   89 (161)
T Consensus         3 Lp~-~~~lm~Drv~~i~~~GG~~~~G~i~ae~~i~~~~wff~~HF~~dpvmPG~L~~ea~~Q~l~~yl~~~G~~~~~~~~   81 (150)
T cd01287           3 LPG-GQLLMLDRVTEIDPGGGTFGLGYLRAEKDIDPDDWFFPCHFHGDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDNP   81 (150)
T ss_pred             CCC-CCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             789-9776569999991799854540999999158785711478998991455369999999999999867765445687


Q ss_pred             CEEEEEEECCCCEEEEEEEECC-EEEEEEEEEEEE----CCEEEEEEEEEECCEEEEEEE-EEEEEE
Q ss_conf             3026775236413600221288-899999999720----777999999999999999899-999984
Q gi|254780770|r   90 YAPPYLMSIDKARFRKPVFPGD-RLEYHVNKVRNR----VDLWKFQCCAKVENTVVAEAE-ICAMVM  150 (161)
Q Consensus        90 ~~~~~l~~i~~~kF~~~V~PGd-~L~i~~~i~~~~----~~~~~~~~~~~v~~~~va~a~-l~~~i~  150 (161)
T Consensus        82 ~f~~~~~~~~~~kfRGQV~P~~k~v~yev~I~~v~~~~~~~~~iADg~l~vDGk~Iy~~~~l~v~l~  148 (150)
T cd01287          82 RFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWVDGLRIYEAKDIAVRLV  148 (150)
T ss_pred             CCEEECCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEECCCEEEEE
T ss_conf             7420338502799978866799389999999999804995899999999989989999808899987