HHsearch alignment for GI: 254780770 and conserved domain: cd03441
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=97.76 E-value=0.0004 Score=45.04 Aligned_cols=90 Identities=22% Similarity=0.227 Sum_probs=55.6
Q ss_pred CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEEC----CE
Q ss_conf 83131347999502256699998634634544329977630267752364136002212888999999997207----77
Q gi|254780770|r 51 EPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRV----DL 126 (161)
Q Consensus 51 e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~----~~ 126 (161)
T Consensus 32 ~~~a~~~~~~~~ia~G~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~ 104 (127)
T cd03441 32 PEYAKAAGFGGRIAHGMLTLSLASGLL---VQWLPG----TDGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGV 104 (127)
T ss_pred HHHHHHCCCCCCEECCHHHHHHHHHHH---HHHCCC----CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCE
T ss_conf 888835789862315544999999999---887066----5513565648865046799999999999999997599709
Q ss_pred EEEEEEEEE-CCEEEEEEEEEE
Q ss_conf 999999999-999999899999
Q gi|254780770|r 127 WKFQCCAKV-ENTVVAEAEICA 147 (161)
Q Consensus 127 ~~~~~~~~v-~~~~va~a~l~~ 147 (161)
T Consensus 105 v~~~~~~~nq~~~~v~~g~~~v 126 (127)
T cd03441 105 VTVRTEARNQGGEVVLSGEATV 126 (127)
T ss_pred EEEEEEEEECCCCEEEEEEEEE
T ss_conf 9999999979999999999994