HHsearch results for GI: 254780770 and protein with PDBid: 1vh5_A
>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A
Probab=97.92 E-value=0.00063 Score=42.59 Aligned_cols=132 Identities=8% Similarity=-0.057 Sum_probs=81.6
Q ss_pred HHHHHHHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHCCC
Q ss_conf 641898998479997505--47899998469749999982688831313479995022566999986346-345443299
Q gi|254780770|r 10 AKDIVELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTA-GAICAIHNG 86 (161)
Q Consensus 10 ~~~~~eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~-~~l~~~~~~ 86 (161)
..++++|.+... .||. +==+++++++| +++....++.. +.. ..-++-|-.+. +++-.+ ++.+....+
T Consensus 8 ~~~le~ln~~~~--~~~~~~Lgi~~~~~~~g-~~~~~~~v~~~--~~n----~~g~lHGG~ia-tl~D~~~~~a~~~~~~ 77 (148)
T 1vh5_A 8 KITLEALNAMGE--GNMVGFLDIRFEHIGDD-TLEATMPVDSR--TKQ----PFGLLHGGASV-VLAESIGSVAGYLCTE 77 (148)
T ss_dssp CCCHHHHHHTTT--TSHHHHTTCEEEEECSS-CEEEEEECSTT--TBC----TTSSBCHHHHH-HHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHCC--CCHHHHCCCEEEEEECC-EEEEEEECCHH--HCC----CCCCCCHHHHH-HHHHHHHHHHHHHHCC
T ss_conf 789999975372--51788649599999699-99999994989--969----99937189999-9988644467765303
Q ss_pred CCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEE-ECCEEEEEEEEEEEEECCCCC
Q ss_conf 776302677523641360022128889999999972077799999999-999999989999998445200
Q gi|254780770|r 87 FDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAK-VENTVVAEAEICAMVMHEKKE 155 (161)
Q Consensus 87 ~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~-v~~~~va~a~l~~~i~~~~~e 155 (161)
. .. .....--++.|.+|+.+|+ +..++++.+..+.+..++++++ -+|+++|.+.-++++.+..+.
T Consensus 78 ~--~~-~~~t~~l~i~flr~a~~g~-~~~~a~vv~~Gr~~~~~~~~i~d~~gklvA~a~~T~~vl~~~~~ 143 (148)
T 1vh5_A 78 G--EQ-KVVGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAILEGGSH 143 (148)
T ss_dssp T--TC-EEEEEEEEEEECSCCCSSE-EEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEEC----
T ss_pred C--CC-EEEEEEEEEEEECCCCCCE-EEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCC
T ss_conf 6--83-3786666899974688871-89999999918969999999990899899999899999918875